Job ID = 12597290
SRX = SRX957106
Genome = sacCer3
Started at	210422_15:47:09

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 30168485 spots for SRR1916134/SRR1916134.sra
Written 30168485 spots for SRR1916134/SRR1916134.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 3109092410 Apr 22 15:48 SRR1916134.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957106.sum.gz
 output alignment file  :SRX957106.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 126 ms)
 -FM-Index for g2a genome.... finished (elapsed: 254 ms)
 -suffix array for c2t genome.... finished (elapsed: 421 ms)
 -suffix array for g2a genome.... finished (elapsed: 551 ms)
 -reference sequence.... finished (elapsed: 561 ms)
Index loading finished.
File(s) loaded: SRR1916134.fastq.gz.
Time elapsed:587650 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 2031032660 Apr 22 16:00 SRX957106.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  320512739 Apr 22 16:00 SRX957106.sum.gz
SRX957106.sum.gz was set to analysis list.
Analyzing SRX957106.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5522 Apr 22 16:02 SRX957106.mapsum.html
Processing "SRX957106.bisulalign.gz" (2031032660 bytes)
**********************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645773 Apr 22 16:04 SRX957106.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   197232 Apr 22 16:04 SRX957106.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957106.graph
Output File (methyl)    :SRX957106.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957106.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957106.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3769183 Apr 22 16:04 SRX957106.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4421349 Apr 22 16:04 SRX957106.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  5013847 Apr 22 16:04 SRX957106.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    38507 Apr 22 16:05 SRX957106.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:05 SRX957106.pmd
-rw-r--r-- 1 okishinya so-ddmku    46332 Apr 22 16:05 SRX957106.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5050657 Apr 22 16:05 SRX957106.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  5197286 Apr 22 16:05 SRX957106.cpg.methyl.bw

=-=-=num_reads	30168482
=-=-=mapping_rate_1	0.917
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.059
=-=-=methyl_rate_cpg_lambda	0.006
=-=-=low_methyl_region	1894
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	2280
=-=-=coverage	80.3862
=-=-=end	210422_16:05:24
=-=-=duration	.304