Job ID = 12597285
SRX = SRX957103
Genome = sacCer3
Started at	210422_15:45:54

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 18656763 spots for SRR1916131/SRR1916131.sra
Written 18656763 spots for SRR1916131/SRR1916131.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1671240223 Apr 22 15:47 SRR1916131.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX957103.sum.gz
 output alignment file  :SRX957103.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 149 ms)
 -FM-Index for g2a genome.... finished (elapsed: 297 ms)
 -suffix array for c2t genome.... finished (elapsed: 348 ms)
 -suffix array for g2a genome.... finished (elapsed: 393 ms)
 -reference sequence.... finished (elapsed: 394 ms)
Index loading finished.
File(s) loaded: SRR1916131.fastq.gz.
Time elapsed:517790 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1270215478 Apr 22 15:57 SRX957103.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  196051438 Apr 22 15:57 SRX957103.sum.gz
SRX957103.sum.gz was set to analysis list.
Analyzing SRX957103.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5678 Apr 22 15:59 SRX957103.mapsum.html
Processing "SRX957103.bisulalign.gz" (1270215478 bytes)
********************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645773 Apr 22 16:00 SRX957103.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   138157 Apr 22 16:00 SRX957103.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX957103.graph
Output File (methyl)    :SRX957103.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX957103.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX957103.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3666147 Apr 22 16:00 SRX957103.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3256286 Apr 22 16:00 SRX957103.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3388107 Apr 22 16:00 SRX957103.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:01 SRX957103.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:01 SRX957103.pmd
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:01 SRX957103.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4911193 Apr 22 16:02 SRX957103.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  1017277 Apr 22 16:01 SRX957103.cpg.methyl.bw

=-=-=num_reads	18656760
=-=-=mapping_rate_1	0.935
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.003
=-=-=methyl_rate_cpg_lambda	0.002
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	0
=-=-=coverage	51.3049
=-=-=end	210422_16:02:04
=-=-=duration	.269