Job ID = 12597243
SRX = SRX3236113
Genome = sacCer3
Started at	210422_15:36:53

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 6218485 spots for SRR6123460/SRR6123460.sra
Written 6218485 spots for SRR6123460/SRR6123460.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 599954040 Apr 22 15:37 SRR6123460.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX3236113.sum.gz
 output alignment file  :SRX3236113.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 246 ms)
 -FM-Index for g2a genome.... finished (elapsed: 507 ms)
 -suffix array for c2t genome.... finished (elapsed: 678 ms)
 -suffix array for g2a genome.... finished (elapsed: 850 ms)
 -reference sequence.... finished (elapsed: 859 ms)
Index loading finished.
File(s) loaded: SRR6123460.fastq.gz.
Time elapsed:275358 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 451211321 Apr 22 15:42 SRX3236113.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  68124989 Apr 22 15:42 SRX3236113.sum.gz
SRX3236113.sum.gz was set to analysis list.
Analyzing SRX3236113.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku      4657 Apr 22 15:43 SRX3236113.mapsum.html
Processing "SRX3236113.bisulalign.gz" (451211321 bytes)
************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku  97645775 Apr 22 15:43 SRX3236113.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku    71376 Apr 22 15:43 SRX3236113.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX3236113.graph
Output File (methyl)    :SRX3236113.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX3236113.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX3236113.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3413381 Apr 22 15:44 SRX3236113.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3099157 Apr 22 15:44 SRX3236113.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3283283 Apr 22 15:44 SRX3236113.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:45 SRX3236113.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:45 SRX3236113.pmd
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:45 SRX3236113.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4753698 Apr 22 15:45 SRX3236113.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku   581423 Apr 22 15:45 SRX3236113.cpg.methyl.bw

=-=-=num_reads	6218483
=-=-=mapping_rate_1	0.917
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.006
=-=-=methyl_rate_cpg_lambda	0.004
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	0
=-=-=coverage	17.7336
=-=-=end	210422_15:45:21
=-=-=duration	.141