Job ID = 12597239
SRX = SRX3236108
Genome = sacCer3
Started at	210422_15:36:38

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 5541714 spots for SRR6123455/SRR6123455.sra
Written 5541714 spots for SRR6123455/SRR6123455.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 529801469 Apr 22 15:37 SRR6123455.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX3236108.sum.gz
 output alignment file  :SRX3236108.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 125 ms)
 -FM-Index for g2a genome.... finished (elapsed: 253 ms)
 -suffix array for c2t genome.... finished (elapsed: 381 ms)
 -suffix array for g2a genome.... finished (elapsed: 506 ms)
 -reference sequence.... finished (elapsed: 515 ms)
Index loading finished.
File(s) loaded: SRR6123455.fastq.gz.
Time elapsed:119848 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 424117587 Apr 22 15:39 SRX3236108.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  62964204 Apr 22 15:39 SRX3236108.sum.gz
SRX3236108.sum.gz was set to analysis list.
Analyzing SRX3236108.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku      5054 Apr 22 15:39 SRX3236108.mapsum.html
Processing "SRX3236108.bisulalign.gz" (424117587 bytes)
**********************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku  97645775 Apr 22 15:40 SRX3236108.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku    69335 Apr 22 15:40 SRX3236108.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX3236108.graph
Output File (methyl)    :SRX3236108.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX3236108.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX3236108.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3444921 Apr 22 15:40 SRX3236108.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3036650 Apr 22 15:40 SRX3236108.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3164539 Apr 22 15:40 SRX3236108.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:41 SRX3236108.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:41 SRX3236108.pmd
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:41 SRX3236108.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4740132 Apr 22 15:41 SRX3236108.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku   398239 Apr 22 15:41 SRX3236108.cpg.methyl.bw

=-=-=num_reads	5541713
=-=-=mapping_rate_1	0.963
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.003
=-=-=methyl_rate_cpg_lambda	0.004
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	0
=-=-=coverage	17.0497
=-=-=end	210422_15:41:05
=-=-=duration	.074