Job ID = 12597246
SRX = SRX3236104
Genome = sacCer3
Started at	210422_15:37:08

sra ファイルのダウンロード中...

Read layout: SINGLE


fastq に変換中...

Read 7028295 spots for SRR6123451/SRR6123451.sra
Written 7028295 spots for SRR6123451/SRR6123451.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 672899676 Apr 22 15:37 SRR6123451.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :SRX3236104.sum.gz
 output alignment file  :SRX3236104.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 168 ms)
 -FM-Index for g2a genome.... finished (elapsed: 331 ms)
 -suffix array for c2t genome.... finished (elapsed: 481 ms)
 -suffix array for g2a genome.... finished (elapsed: 637 ms)
 -reference sequence.... finished (elapsed: 649 ms)
Index loading finished.
File(s) loaded: SRR6123451.fastq.gz.
Time elapsed:216380 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 534509439 Apr 22 15:41 SRX3236104.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  79125671 Apr 22 15:41 SRX3236104.sum.gz
SRX3236104.sum.gz was set to analysis list.
Analyzing SRX3236104.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku      5312 Apr 22 15:42 SRX3236104.mapsum.html
Processing "SRX3236104.bisulalign.gz" (534509439 bytes)
********************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku  97645775 Apr 22 15:43 SRX3236104.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku    78263 Apr 22 15:43 SRX3236104.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :SRX3236104.graph
Output File (methyl)    :SRX3236104.cpg.methyl.bedGraph.gz
Output File (cover)    :SRX3236104.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :SRX3236104.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3540129 Apr 22 15:43 SRX3236104.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3363478 Apr 22 15:43 SRX3236104.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3695240 Apr 22 15:43 SRX3236104.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:45 SRX3236104.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:45 SRX3236104.pmd
-rw-r--r-- 1 okishinya so-ddmku      140 Apr 22 15:45 SRX3236104.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4808810 Apr 22 15:45 SRX3236104.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  1560022 Apr 22 15:45 SRX3236104.cpg.methyl.bw

=-=-=num_reads	7028291
=-=-=mapping_rate_1	0.954
=-=-=mapping_rate_2	N/A
=-=-=methyl_rate_cpg_total	0.023
=-=-=methyl_rate_cpg_lambda	0.004
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	7
=-=-=coverage	21.9599
=-=-=end	210422_15:45:13
=-=-=duration	.134