Job ID = 12597275
SRX = ERX4244117
Genome = sacCer3
Started at	210422_15:44:39

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 13709599 spots for ERR4292372/ERR4292372.sra
Written 13709599 spots for ERR4292372/ERR4292372.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1135828870 Apr 22 15:46 ERR4292372_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 1021781233 Apr 22 15:46 ERR4292372_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244117.sum.gz
 output alignment file  :ERX4244117.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 148 ms)
 -FM-Index for g2a genome.... finished (elapsed: 296 ms)
 -suffix array for c2t genome.... finished (elapsed: 340 ms)
 -suffix array for g2a genome.... finished (elapsed: 391 ms)
 -reference sequence.... finished (elapsed: 393 ms)
Index loading finished.
File(s) loaded: ERR4292372_1.fastq.gz, ERR4292372_2.fastq.gz.
Time elapsed:604990 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1820597041 Apr 22 15:59 ERX4244117.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  229757383 Apr 22 15:59 ERX4244117.sum.gz
ERX4244117.sum.gz was set to analysis list.
Analyzing ERX4244117.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5469 Apr 22 16:02 ERX4244117.mapsum.html
Processing "ERX4244117.bisulalign.gz" (1820597041 bytes)
***********: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:03 ERX4244117.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   184948 Apr 22 16:03 ERX4244117.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244117.graph
Output File (methyl)    :ERX4244117.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244117.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244117.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3710681 Apr 22 16:03 ERX4244117.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3964647 Apr 22 16:03 ERX4244117.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4295826 Apr 22 16:03 ERX4244117.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:05 ERX4244117.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:05 ERX4244117.pmd
-rw-r--r-- 1 okishinya so-ddmku     8941 Apr 22 16:05 ERX4244117.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4929508 Apr 22 16:05 ERX4244117.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  3514805 Apr 22 16:05 ERX4244117.cpg.methyl.bw

=-=-=num_reads	13709594
=-=-=mapping_rate_1	0.935
=-=-=mapping_rate_2	0.931
=-=-=methyl_rate_cpg_total	0.028
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	443
=-=-=coverage	93.1446
=-=-=end	210422_16:05:17
=-=-=duration	.343