Job ID = 12597277
SRX = ERX4244116
Genome = sacCer3
Started at	210422_15:44:54

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 13906224 spots for ERR4292371/ERR4292371.sra
Written 13906224 spots for ERR4292371/ERR4292371.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1160459132 Apr 22 15:46 ERR4292371_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku  970224669 Apr 22 15:46 ERR4292371_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244116.sum.gz
 output alignment file  :ERX4244116.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 128 ms)
 -FM-Index for g2a genome.... finished (elapsed: 258 ms)
 -suffix array for c2t genome.... finished (elapsed: 434 ms)
 -suffix array for g2a genome.... finished (elapsed: 561 ms)
 -reference sequence.... finished (elapsed: 570 ms)
Index loading finished.
File(s) loaded: ERR4292371_1.fastq.gz, ERR4292371_2.fastq.gz.
Time elapsed:504389 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1871332680 Apr 22 15:56 ERX4244116.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  239396815 Apr 22 15:56 ERX4244116.sum.gz
ERX4244116.sum.gz was set to analysis list.
Analyzing ERX4244116.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5765 Apr 22 15:59 ERX4244116.mapsum.html
Processing "ERX4244116.bisulalign.gz" (1871332680 bytes)
*********************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 15:59 ERX4244116.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   190527 Apr 22 15:59 ERX4244116.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244116.graph
Output File (methyl)    :ERX4244116.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244116.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244116.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3775600 Apr 22 16:00 ERX4244116.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4115758 Apr 22 16:00 ERX4244116.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4338801 Apr 22 16:00 ERX4244116.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku     9004 Apr 22 16:00 ERX4244116.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:00 ERX4244116.pmd
-rw-r--r-- 1 okishinya so-ddmku    30469 Apr 22 16:00 ERX4244116.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5020546 Apr 22 16:01 ERX4244116.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  3561769 Apr 22 16:00 ERX4244116.cpg.methyl.bw

=-=-=num_reads	13906221
=-=-=mapping_rate_1	0.944
=-=-=mapping_rate_2	0.942
=-=-=methyl_rate_cpg_total	0.034
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	444
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	1497
=-=-=coverage	95.417
=-=-=end	210422_16:01:00
=-=-=duration	.268