Job ID = 12597267
SRX = ERX4244115
Genome = sacCer3
Started at	210422_15:44:09

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 11766086 spots for ERR4292370/ERR4292370.sra
Written 11766086 spots for ERR4292370/ERR4292370.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 980375632 Apr 22 15:45 ERR4292370_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 893563895 Apr 22 15:45 ERR4292370_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244115.sum.gz
 output alignment file  :ERX4244115.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 124 ms)
 -FM-Index for g2a genome.... finished (elapsed: 250 ms)
 -suffix array for c2t genome.... finished (elapsed: 314 ms)
 -suffix array for g2a genome.... finished (elapsed: 363 ms)
 -reference sequence.... finished (elapsed: 365 ms)
Index loading finished.
File(s) loaded: ERR4292370_1.fastq.gz, ERR4292370_2.fastq.gz.
Time elapsed:398345 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1593433755 Apr 22 15:53 ERX4244115.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  197322700 Apr 22 15:53 ERX4244115.sum.gz
ERX4244115.sum.gz was set to analysis list.
Analyzing ERX4244115.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5444 Apr 22 15:55 ERX4244115.mapsum.html
Processing "ERX4244115.bisulalign.gz" (1593433755 bytes)
*******************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 15:56 ERX4244115.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   164601 Apr 22 15:56 ERX4244115.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244115.graph
Output File (methyl)    :ERX4244115.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244115.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244115.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3718318 Apr 22 15:56 ERX4244115.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4358263 Apr 22 15:56 ERX4244115.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4748287 Apr 22 15:56 ERX4244115.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:57 ERX4244115.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:57 ERX4244115.pmd
-rw-r--r-- 1 okishinya so-ddmku    44969 Apr 22 15:57 ERX4244115.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4970459 Apr 22 15:57 ERX4244115.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  4463946 Apr 22 15:57 ERX4244115.cpg.methyl.bw

=-=-=num_reads	11766086
=-=-=mapping_rate_1	0.921
=-=-=mapping_rate_2	0.915
=-=-=methyl_rate_cpg_total	0.083
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	2213
=-=-=coverage	78.8661
=-=-=end	210422_15:57:07
=-=-=duration	.216