Job ID = 12597268
SRX = ERX4244114
Genome = sacCer3
Started at	210422_15:44:09

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 11821629 spots for ERR4292369/ERR4292369.sra
Written 11821629 spots for ERR4292369/ERR4292369.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 993598229 Apr 22 15:46 ERR4292369_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 898814833 Apr 22 15:46 ERR4292369_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244114.sum.gz
 output alignment file  :ERX4244114.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 147 ms)
 -FM-Index for g2a genome.... finished (elapsed: 295 ms)
 -suffix array for c2t genome.... finished (elapsed: 340 ms)
 -suffix array for g2a genome.... finished (elapsed: 383 ms)
 -reference sequence.... finished (elapsed: 385 ms)
Index loading finished.
File(s) loaded: ERR4292369_1.fastq.gz, ERR4292369_2.fastq.gz.
Time elapsed:626329 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1491468707 Apr 22 15:58 ERX4244114.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  194916777 Apr 22 15:58 ERX4244114.sum.gz
ERX4244114.sum.gz was set to analysis list.
Analyzing ERX4244114.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5637 Apr 22 16:01 ERX4244114.mapsum.html
Processing "ERX4244114.bisulalign.gz" (1491468707 bytes)
*********************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:01 ERX4244114.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   159027 Apr 22 16:02 ERX4244114.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244114.graph
Output File (methyl)    :ERX4244114.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244114.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244114.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3675825 Apr 22 16:02 ERX4244114.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4245169 Apr 22 16:02 ERX4244114.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4716875 Apr 22 16:02 ERX4244114.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku       21 Apr 22 16:03 ERX4244114.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:03 ERX4244114.pmd
-rw-r--r-- 1 okishinya so-ddmku    43087 Apr 22 16:03 ERX4244114.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4884201 Apr 22 16:03 ERX4244114.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  4398693 Apr 22 16:03 ERX4244114.cpg.methyl.bw

=-=-=num_reads	11821625
=-=-=mapping_rate_1	0.919
=-=-=mapping_rate_2	0.916
=-=-=methyl_rate_cpg_total	0.095
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	1
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	2121
=-=-=coverage	77.5786
=-=-=end	210422_16:03:26
=-=-=duration	.321