Job ID = 12597274
SRX = ERX4244113
Genome = sacCer3
Started at	210422_15:44:39

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 13173557 spots for ERR4292368/ERR4292368.sra
Written 13173557 spots for ERR4292368/ERR4292368.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1091877616 Apr 22 15:46 ERR4292368_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku  987659932 Apr 22 15:46 ERR4292368_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244113.sum.gz
 output alignment file  :ERX4244113.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 150 ms)
 -FM-Index for g2a genome.... finished (elapsed: 300 ms)
 -suffix array for c2t genome.... finished (elapsed: 366 ms)
 -suffix array for g2a genome.... finished (elapsed: 432 ms)
 -reference sequence.... finished (elapsed: 434 ms)
Index loading finished.
File(s) loaded: ERR4292368_1.fastq.gz, ERR4292368_2.fastq.gz.
Time elapsed:741172 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1733104465 Apr 22 16:01 ERX4244113.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  221800206 Apr 22 16:01 ERX4244113.sum.gz
ERX4244113.sum.gz was set to analysis list.
Analyzing ERX4244113.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5500 Apr 22 16:04 ERX4244113.mapsum.html
Processing "ERX4244113.bisulalign.gz" (1733104465 bytes)
********************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:05 ERX4244113.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   179392 Apr 22 16:05 ERX4244113.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244113.graph
Output File (methyl)    :ERX4244113.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244113.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244113.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  4445008 Apr 22 16:05 ERX4244113.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3739914 Apr 22 16:05 ERX4244113.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4830918 Apr 22 16:05 ERX4244113.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:07 ERX4244113.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:07 ERX4244113.pmd
-rw-r--r-- 1 okishinya so-ddmku    50985 Apr 22 16:07 ERX4244113.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4982661 Apr 22 16:07 ERX4244113.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  4601544 Apr 22 16:07 ERX4244113.cpg.methyl.bw

=-=-=num_reads	13173554
=-=-=mapping_rate_1	0.927
=-=-=mapping_rate_2	0.924
=-=-=methyl_rate_cpg_total	0.095
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	2510
=-=-=coverage	87.9974
=-=-=end	210422_16:07:15
=-=-=duration	.376