Job ID = 12597260
SRX = ERX4244112
Genome = sacCer3
Started at	210422_15:41:12

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 11092977 spots for ERR4292367/ERR4292367.sra
Written 11092977 spots for ERR4292367/ERR4292367.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 925465864 Apr 22 15:42 ERR4292367_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 830115649 Apr 22 15:42 ERR4292367_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244112.sum.gz
 output alignment file  :ERX4244112.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 115 ms)
 -FM-Index for g2a genome.... finished (elapsed: 233 ms)
 -suffix array for c2t genome.... finished (elapsed: 292 ms)
 -suffix array for g2a genome.... finished (elapsed: 348 ms)
 -reference sequence.... finished (elapsed: 350 ms)
Index loading finished.
File(s) loaded: ERR4292367_1.fastq.gz, ERR4292367_2.fastq.gz.
Time elapsed:342179 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1397163414 Apr 22 15:49 ERX4244112.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  186109879 Apr 22 15:49 ERX4244112.sum.gz
ERX4244112.sum.gz was set to analysis list.
Analyzing ERX4244112.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5792 Apr 22 15:51 ERX4244112.mapsum.html
Processing "ERX4244112.bisulalign.gz" (1397163414 bytes)
*****************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 15:51 ERX4244112.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   153470 Apr 22 15:51 ERX4244112.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244112.graph
Output File (methyl)    :ERX4244112.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244112.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244112.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3661998 Apr 22 15:51 ERX4244112.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4008205 Apr 22 15:51 ERX4244112.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4446492 Apr 22 15:51 ERX4244112.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:52 ERX4244112.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:52 ERX4244112.pmd
-rw-r--r-- 1 okishinya so-ddmku    30220 Apr 22 15:52 ERX4244112.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  4857405 Apr 22 15:52 ERX4244112.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  3832186 Apr 22 15:52 ERX4244112.cpg.methyl.bw

=-=-=num_reads	11092973
=-=-=mapping_rate_1	0.933
=-=-=mapping_rate_2	0.928
=-=-=methyl_rate_cpg_total	0.055
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	1485
=-=-=coverage	73.5994
=-=-=end	210422_15:52:37
=-=-=duration	.190