Job ID = 12597273
SRX = ERX4244111
Genome = sacCer3
Started at	210422_15:44:39

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 13152718 spots for ERR4292366/ERR4292366.sra
Written 13152718 spots for ERR4292366/ERR4292366.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1085998693 Apr 22 15:46 ERR4292366_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku  977035664 Apr 22 15:46 ERR4292366_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244111.sum.gz
 output alignment file  :ERX4244111.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 120 ms)
 -FM-Index for g2a genome.... finished (elapsed: 243 ms)
 -suffix array for c2t genome.... finished (elapsed: 304 ms)
 -suffix array for g2a genome.... finished (elapsed: 364 ms)
 -reference sequence.... finished (elapsed: 366 ms)
Index loading finished.
File(s) loaded: ERR4292366_1.fastq.gz, ERR4292366_2.fastq.gz.
Time elapsed:445988 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1758802441 Apr 22 15:55 ERX4244111.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  228474251 Apr 22 15:55 ERX4244111.sum.gz
ERX4244111.sum.gz was set to analysis list.
Analyzing ERX4244111.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5601 Apr 22 15:57 ERX4244111.mapsum.html
Processing "ERX4244111.bisulalign.gz" (1758802441 bytes)
*******: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 15:58 ERX4244111.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   183053 Apr 22 15:58 ERX4244111.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244111.graph
Output File (methyl)    :ERX4244111.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244111.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244111.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3773117 Apr 22 15:58 ERX4244111.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4320881 Apr 22 15:58 ERX4244111.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  4602861 Apr 22 15:58 ERX4244111.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:59 ERX4244111.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 15:59 ERX4244111.pmd
-rw-r--r-- 1 okishinya so-ddmku    37320 Apr 22 15:59 ERX4244111.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5033221 Apr 22 15:59 ERX4244111.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  4136342 Apr 22 15:59 ERX4244111.cpg.methyl.bw

=-=-=num_reads	13152716
=-=-=mapping_rate_1	0.947
=-=-=mapping_rate_2	0.944
=-=-=methyl_rate_cpg_total	0.051
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	0
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	1835
=-=-=coverage	89.6497
=-=-=end	210422_15:59:18
=-=-=duration	.244