Job ID = 12597282
SRX = ERX4244109
Genome = sacCer3
Started at	210422_15:45:39

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 17737059 spots for ERR4292364/ERR4292364.sra
Written 17737059 spots for ERR4292364/ERR4292364.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1538490717 Apr 22 15:48 ERR4292364_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 1441817848 Apr 22 15:48 ERR4292364_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244109.sum.gz
 output alignment file  :ERX4244109.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 255 ms)
 -FM-Index for g2a genome.... finished (elapsed: 522 ms)
 -suffix array for c2t genome.... finished (elapsed: 680 ms)
 -suffix array for g2a genome.... finished (elapsed: 836 ms)
 -reference sequence.... finished (elapsed: 847 ms)
Index loading finished.
File(s) loaded: ERR4292364_1.fastq.gz, ERR4292364_2.fastq.gz.
Time elapsed:844544 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 2021280370 Apr 22 16:04 ERX4244109.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  314863343 Apr 22 16:04 ERX4244109.sum.gz
ERX4244109.sum.gz was set to analysis list.
Analyzing ERX4244109.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5606 Apr 22 16:08 ERX4244109.mapsum.html
Processing "ERX4244109.bisulalign.gz" (2021280370 bytes)
**************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:09 ERX4244109.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   203223 Apr 22 16:09 ERX4244109.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244109.graph
Output File (methyl)    :ERX4244109.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244109.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244109.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3851599 Apr 22 16:09 ERX4244109.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  3389937 Apr 22 16:09 ERX4244109.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  3276621 Apr 22 16:09 ERX4244109.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku      794 Apr 22 16:10 ERX4244109.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:10 ERX4244109.pmd
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:10 ERX4244109.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5069100 Apr 22 16:10 ERX4244109.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku   542380 Apr 22 16:10 ERX4244109.cpg.methyl.bw

=-=-=num_reads	17737057
=-=-=mapping_rate_1	0.958
=-=-=mapping_rate_2	0.952
=-=-=methyl_rate_cpg_total	0.001
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	40
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	0
=-=-=coverage	92.5458
=-=-=end	210422_16:10:55
=-=-=duration	.421