Job ID = 12597293
SRX = ERX4244106
Genome = sacCer3
Started at	210422_15:47:39

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 43587261 spots for ERR4292361/ERR4292361.sra
Written 43587261 spots for ERR4292361/ERR4292361.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1830111883 Apr 22 15:51 ERR4292361_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 1803638698 Apr 22 15:51 ERR4292361_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244106.sum.gz
 output alignment file  :ERX4244106.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 123 ms)
 -FM-Index for g2a genome.... finished (elapsed: 248 ms)
 -suffix array for c2t genome.... finished (elapsed: 306 ms)
 -suffix array for g2a genome.... finished (elapsed: 364 ms)
 -reference sequence.... finished (elapsed: 366 ms)
Index loading finished.
File(s) loaded: ERR4292361_1.fastq.gz, ERR4292361_2.fastq.gz.
Time elapsed:1301469 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 5493254006 Apr 22 16:17 ERX4244106.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  758269823 Apr 22 16:17 ERX4244106.sum.gz
ERX4244106.sum.gz was set to analysis list.
Analyzing ERX4244106.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       6076 Apr 22 16:24 ERX4244106.mapsum.html
Processing "ERX4244106.bisulalign.gz" (5493254006 bytes)
*******************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:26 ERX4244106.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   421448 Apr 22 16:26 ERX4244106.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244106.graph
Output File (methyl)    :ERX4244106.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244106.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244106.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  4058869 Apr 22 16:26 ERX4244106.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  5363940 Apr 22 16:26 ERX4244106.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  5764592 Apr 22 16:26 ERX4244106.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    82446 Apr 22 16:27 ERX4244106.hmr
-rw-r--r-- 1 okishinya so-ddmku       14 Apr 22 16:27 ERX4244106.pmd
-rw-r--r-- 1 okishinya so-ddmku    68707 Apr 22 16:27 ERX4244106.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5135152 Apr 22 16:27 ERX4244106.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  6314642 Apr 22 16:27 ERX4244106.cpg.methyl.bw

=-=-=num_reads	43587261
=-=-=mapping_rate_1	0.958
=-=-=mapping_rate_2	0.951
=-=-=methyl_rate_cpg_total	0.199
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	4051
=-=-=partial_methyl_region	1
=-=-=high_methyl_region	3384
=-=-=coverage	194.793
=-=-=end	210422_16:27:45
=-=-=duration	.668