Job ID = 12597279
SRX = ERX4244105
Genome = sacCer3
Started at	210422_15:44:54

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 16658415 spots for ERR4292360/ERR4292360.sra
Written 16658415 spots for ERR4292360/ERR4292360.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1451541001 Apr 22 15:47 ERR4292360_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 1378512052 Apr 22 15:47 ERR4292360_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244105.sum.gz
 output alignment file  :ERX4244105.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 152 ms)
 -FM-Index for g2a genome.... finished (elapsed: 303 ms)
 -suffix array for c2t genome.... finished (elapsed: 365 ms)
 -suffix array for g2a genome.... finished (elapsed: 425 ms)
 -reference sequence.... finished (elapsed: 426 ms)
Index loading finished.
File(s) loaded: ERR4292360_1.fastq.gz, ERR4292360_2.fastq.gz.
Time elapsed:879451 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 1993675433 Apr 22 16:04 ERX4244105.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  301111110 Apr 22 16:04 ERX4244105.sum.gz
ERX4244105.sum.gz was set to analysis list.
Analyzing ERX4244105.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5734 Apr 22 16:08 ERX4244105.mapsum.html
Processing "ERX4244105.bisulalign.gz" (1993675433 bytes)
***************************************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:09 ERX4244105.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   200448 Apr 22 16:09 ERX4244105.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244105.graph
Output File (methyl)    :ERX4244105.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244105.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244105.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3811211 Apr 22 16:10 ERX4244105.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4934393 Apr 22 16:10 ERX4244105.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  5450985 Apr 22 16:10 ERX4244105.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    78036 Apr 22 16:11 ERX4244105.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:11 ERX4244105.pmd
-rw-r--r-- 1 okishinya so-ddmku    72691 Apr 22 16:11 ERX4244105.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5057119 Apr 22 16:11 ERX4244105.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  5924328 Apr 22 16:11 ERX4244105.cpg.methyl.bw

=-=-=num_reads	16658413
=-=-=mapping_rate_1	0.974
=-=-=mapping_rate_2	0.968
=-=-=methyl_rate_cpg_total	0.256
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	3835
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	3579
=-=-=coverage	89.006
=-=-=end	210422_16:11:35
=-=-=duration	.444