Job ID = 12597286
SRX = ERX4244104
Genome = sacCer3
Started at	210422_15:46:09

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 18755181 spots for ERR4292359/ERR4292359.sra
Written 18755181 spots for ERR4292359/ERR4292359.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1633977059 Apr 22 15:49 ERR4292359_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 1543924100 Apr 22 15:49 ERR4292359_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244104.sum.gz
 output alignment file  :ERX4244104.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 162 ms)
 -FM-Index for g2a genome.... finished (elapsed: 315 ms)
 -suffix array for c2t genome.... finished (elapsed: 360 ms)
 -suffix array for g2a genome.... finished (elapsed: 405 ms)
 -reference sequence.... finished (elapsed: 406 ms)
Index loading finished.
File(s) loaded: ERR4292359_1.fastq.gz, ERR4292359_2.fastq.gz.
Time elapsed:1006022 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 2140354256 Apr 22 16:09 ERX4244104.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  335707136 Apr 22 16:09 ERX4244104.sum.gz
ERX4244104.sum.gz was set to analysis list.
Analyzing ERX4244104.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       6010 Apr 22 16:13 ERX4244104.mapsum.html
Processing "ERX4244104.bisulalign.gz" (2140354256 bytes)
***************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:15 ERX4244104.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   212225 Apr 22 16:15 ERX4244104.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244104.graph
Output File (methyl)    :ERX4244104.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244104.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244104.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3856502 Apr 22 16:15 ERX4244104.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  5050113 Apr 22 16:15 ERX4244104.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  5551038 Apr 22 16:15 ERX4244104.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    76394 Apr 22 16:17 ERX4244104.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:17 ERX4244104.pmd
-rw-r--r-- 1 okishinya so-ddmku    75862 Apr 22 16:17 ERX4244104.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5069228 Apr 22 16:17 ERX4244104.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  6093161 Apr 22 16:17 ERX4244104.cpg.methyl.bw

=-=-=num_reads	18755178
=-=-=mapping_rate_1	0.97
=-=-=mapping_rate_2	0.965
=-=-=methyl_rate_cpg_total	0.278
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	3753
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	3735
=-=-=coverage	95.9747
=-=-=end	210422_16:17:15
=-=-=duration	.518