Job ID = 12597287
SRX = ERX4244103
Genome = sacCer3
Started at	210422_15:46:24

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 18936702 spots for ERR4292358/ERR4292358.sra
Written 18936702 spots for ERR4292358/ERR4292358.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1641419544 Apr 22 15:49 ERR4292358_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 1546030852 Apr 22 15:49 ERR4292358_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244103.sum.gz
 output alignment file  :ERX4244103.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 237 ms)
 -FM-Index for g2a genome.... finished (elapsed: 488 ms)
 -suffix array for c2t genome.... finished (elapsed: 550 ms)
 -suffix array for g2a genome.... finished (elapsed: 609 ms)
 -reference sequence.... finished (elapsed: 610 ms)
Index loading finished.
File(s) loaded: ERR4292358_1.fastq.gz, ERR4292358_2.fastq.gz.
Time elapsed:1569560 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 2193875308 Apr 22 16:19 ERX4244103.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  339149965 Apr 22 16:19 ERX4244103.sum.gz
ERX4244103.sum.gz was set to analysis list.
Analyzing ERX4244103.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5812 Apr 22 16:23 ERX4244103.mapsum.html
Processing "ERX4244103.bisulalign.gz" (2193875308 bytes)
***********: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:24 ERX4244103.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   217300 Apr 22 16:24 ERX4244103.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244103.graph
Output File (methyl)    :ERX4244103.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244103.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244103.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3896012 Apr 22 16:25 ERX4244103.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4631486 Apr 22 16:25 ERX4244103.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  5049657 Apr 22 16:25 ERX4244103.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    76454 Apr 22 16:26 ERX4244103.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:26 ERX4244103.pmd
-rw-r--r-- 1 okishinya so-ddmku    57160 Apr 22 16:26 ERX4244103.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5085481 Apr 22 16:26 ERX4244103.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  5082952 Apr 22 16:26 ERX4244103.cpg.methyl.bw

=-=-=num_reads	18936700
=-=-=mapping_rate_1	0.968
=-=-=mapping_rate_2	0.962
=-=-=methyl_rate_cpg_total	0.088
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	3760
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	2815
=-=-=coverage	99.628
=-=-=end	210422_16:26:24
=-=-=duration	.666