Job ID = 12597283
SRX = ERX4244102
Genome = sacCer3
Started at	210422_15:45:54

sra ファイルのダウンロード中...

Read layout: PAIRED


fastq に変換中...

Read 17888355 spots for ERR4292357/ERR4292357.sra
Written 17888355 spots for ERR4292357/ERR4292357.sra

fastq に変換しました。

-rw-r--r-- 1 okishinya so-ddmku 1552671311 Apr 22 15:47 ERR4292357_1.fastq.gz
-rw-r--r-- 1 okishinya so-ddmku 1466825263 Apr 22 15:47 ERR4292357_2.fastq.gz
Start BMap mapping with following parameters
 species                :S_cerevisiae
 revision               :sacCer3
 seed offset            :0
 seed iterate           :20
 seed step              :5
 min seed hit           :2
 minimum seed length    :20
 maximum seed length    :26
 seed max hit count     :10
 minimum alignment score:150
 output summary file    :ERX4244102.sum.gz
 output alignment file  :ERX4244102.bisulalign

Loading index (FM-index)
    compression factor for suffix array is 2.
    compression factor for counter table is 32.
 -FM-index for c2t genome.... finished (elapsed: 117 ms)
 -FM-Index for g2a genome.... finished (elapsed: 236 ms)
 -suffix array for c2t genome.... finished (elapsed: 297 ms)
 -suffix array for g2a genome.... finished (elapsed: 355 ms)
 -reference sequence.... finished (elapsed: 357 ms)
Index loading finished.
File(s) loaded: ERR4292357_1.fastq.gz, ERR4292357_2.fastq.gz.
Time elapsed:560535 ms
=-=-=BMap	OK
-rw-r--r-- 1 okishinya so-ddmku 2115276227 Apr 22 15:59 ERX4244102.bisulalign.gz
-rw-r--r-- 1 okishinya so-ddmku  320207033 Apr 22 15:59 ERX4244102.sum.gz
ERX4244102.sum.gz was set to analysis list.
Analyzing ERX4244102.sum.gz.
=-=-=MapSum	OK
-rw-r--r-- 1 okishinya so-ddmku       5514 Apr 22 16:02 ERX4244102.mapsum.html
Processing "ERX4244102.bisulalign.gz" (2115276227 bytes)
**********************: finished.
Start exporting ...
Finished.
=-=-=MPTC	OK
-rw-r--r-- 1 okishinya so-ddmku   97645775 Apr 22 16:03 ERX4244102.graph
=-=-=CalcCoverage	OK
-rw-r--r-- 1 okishinya so-ddmku   210392 Apr 22 16:03 ERX4244102.stat.html
BinSeq                  :/lustre7/home/lustre4/okishinya/chipatlas/bin/Revisions/S_cerevisiae/sacCer3/S_cerevisiae_sacCer3.binseq
GraphFile               :ERX4244102.graph
Output File (methyl)    :ERX4244102.cpg.methyl.bedGraph.gz
Output File (cover)    :ERX4244102.cpg.cover.bedGraph.gz
Output File (tab)    :/dev/null
Output File (methpipe)    :ERX4244102.cpg.methpipe.tab.gz

=-=-=MethExport	OK
-rw-r--r-- 1 okishinya so-ddmku  3879477 Apr 22 16:03 ERX4244102.cpg.cover.bedGraph.gz
-rw-r--r-- 1 okishinya so-ddmku  4680402 Apr 22 16:03 ERX4244102.cpg.methpipe.tab.gz
-rw-r--r-- 1 okishinya so-ddmku  5097125 Apr 22 16:03 ERX4244102.cpg.methyl.bedGraph.gz
=-=-=bmap_sum	OK
=-=-=hypo- hyper-me-region	OK
-rw-r--r-- 1 okishinya so-ddmku    78762 Apr 22 16:04 ERX4244102.hmr
-rw-r--r-- 1 okishinya so-ddmku        0 Apr 22 16:04 ERX4244102.pmd
-rw-r--r-- 1 okishinya so-ddmku    60230 Apr 22 16:04 ERX4244102.hypermr
=-=-=BigWig	OK
-rw-r--r-- 1 okishinya so-ddmku  5086264 Apr 22 16:04 ERX4244102.cpg.cover.bw
-rw-r--r-- 1 okishinya so-ddmku  5177419 Apr 22 16:04 ERX4244102.cpg.methyl.bw

=-=-=num_reads	17888353
=-=-=mapping_rate_1	0.968
=-=-=mapping_rate_2	0.962
=-=-=methyl_rate_cpg_total	0.102
=-=-=methyl_rate_cpg_lambda	0.001
=-=-=low_methyl_region	3872
=-=-=partial_methyl_region	0
=-=-=high_methyl_region	2966
=-=-=coverage	96.1292
=-=-=end	210422_16:04:15
=-=-=duration	.305