Job ID = 8184307 SRX = SRX8047585 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-08-10T03:15:42 prefetch.2.10.7: 1) Downloading 'SRR11471310'... 2020-08-10T03:15:42 prefetch.2.10.7: Downloading via HTTPS... 2020-08-10T03:19:21 prefetch.2.10.7: HTTPS download succeed 2020-08-10T03:19:21 prefetch.2.10.7: 1) 'SRR11471310' was downloaded successfully Read 53866530 spots for SRR11471310/SRR11471310.sra Written 53866530 spots for SRR11471310/SRR11471310.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:42:00 53866530 reads; of these: 53866530 (100.00%) were unpaired; of these: 2256506 (4.19%) aligned 0 times 37793056 (70.16%) aligned exactly 1 time 13816968 (25.65%) aligned >1 times 95.81% overall alignment rate Time searching: 00:42:04 Overall time: 00:42:04 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 24 files... [bam_rmdupse_core] 2847111 / 51610024 = 0.0552 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:17:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:17:48: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:17:48: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:17:54: 1000000 INFO @ Mon, 10 Aug 2020 13:18:00: 2000000 INFO @ Mon, 10 Aug 2020 13:18:05: 3000000 INFO @ Mon, 10 Aug 2020 13:18:11: 4000000 INFO @ Mon, 10 Aug 2020 13:18:16: 5000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:18:18: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:18:18: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:18:18: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:18:22: 6000000 INFO @ Mon, 10 Aug 2020 13:18:24: 1000000 INFO @ Mon, 10 Aug 2020 13:18:28: 7000000 INFO @ Mon, 10 Aug 2020 13:18:30: 2000000 INFO @ Mon, 10 Aug 2020 13:18:34: 8000000 INFO @ Mon, 10 Aug 2020 13:18:36: 3000000 INFO @ Mon, 10 Aug 2020 13:18:40: 9000000 INFO @ Mon, 10 Aug 2020 13:18:42: 4000000 INFO @ Mon, 10 Aug 2020 13:18:46: 10000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Mon, 10 Aug 2020 13:18:48: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Mon, 10 Aug 2020 13:18:48: #1 read tag files... INFO @ Mon, 10 Aug 2020 13:18:48: #1 read treatment tags... INFO @ Mon, 10 Aug 2020 13:18:48: 5000000 INFO @ Mon, 10 Aug 2020 13:18:52: 11000000 INFO @ Mon, 10 Aug 2020 13:18:54: 1000000 INFO @ Mon, 10 Aug 2020 13:18:54: 6000000 INFO @ Mon, 10 Aug 2020 13:18:58: 12000000 INFO @ Mon, 10 Aug 2020 13:19:00: 2000000 INFO @ Mon, 10 Aug 2020 13:19:00: 7000000 INFO @ Mon, 10 Aug 2020 13:19:04: 13000000 INFO @ Mon, 10 Aug 2020 13:19:06: 3000000 INFO @ Mon, 10 Aug 2020 13:19:06: 8000000 INFO @ Mon, 10 Aug 2020 13:19:10: 14000000 INFO @ Mon, 10 Aug 2020 13:19:12: 4000000 INFO @ Mon, 10 Aug 2020 13:19:12: 9000000 INFO @ Mon, 10 Aug 2020 13:19:16: 15000000 INFO @ Mon, 10 Aug 2020 13:19:18: 5000000 INFO @ Mon, 10 Aug 2020 13:19:18: 10000000 INFO @ Mon, 10 Aug 2020 13:19:22: 16000000 INFO @ Mon, 10 Aug 2020 13:19:24: 6000000 INFO @ Mon, 10 Aug 2020 13:19:24: 11000000 INFO @ Mon, 10 Aug 2020 13:19:28: 17000000 INFO @ Mon, 10 Aug 2020 13:19:30: 7000000 INFO @ Mon, 10 Aug 2020 13:19:30: 12000000 INFO @ Mon, 10 Aug 2020 13:19:34: 18000000 INFO @ Mon, 10 Aug 2020 13:19:36: 8000000 INFO @ Mon, 10 Aug 2020 13:19:36: 13000000 INFO @ Mon, 10 Aug 2020 13:19:39: 19000000 INFO @ Mon, 10 Aug 2020 13:19:42: 14000000 INFO @ Mon, 10 Aug 2020 13:19:42: 9000000 INFO @ Mon, 10 Aug 2020 13:19:45: 20000000 INFO @ Mon, 10 Aug 2020 13:19:48: 15000000 INFO @ Mon, 10 Aug 2020 13:19:48: 10000000 INFO @ Mon, 10 Aug 2020 13:19:51: 21000000 INFO @ Mon, 10 Aug 2020 13:19:54: 16000000 INFO @ Mon, 10 Aug 2020 13:19:54: 11000000 INFO @ Mon, 10 Aug 2020 13:19:57: 22000000 INFO @ Mon, 10 Aug 2020 13:20:00: 17000000 INFO @ Mon, 10 Aug 2020 13:20:00: 12000000 INFO @ Mon, 10 Aug 2020 13:20:03: 23000000 INFO @ Mon, 10 Aug 2020 13:20:06: 18000000 INFO @ Mon, 10 Aug 2020 13:20:06: 13000000 INFO @ Mon, 10 Aug 2020 13:20:09: 24000000 INFO @ Mon, 10 Aug 2020 13:20:12: 19000000 INFO @ Mon, 10 Aug 2020 13:20:12: 14000000 INFO @ Mon, 10 Aug 2020 13:20:15: 25000000 INFO @ Mon, 10 Aug 2020 13:20:18: 20000000 INFO @ Mon, 10 Aug 2020 13:20:18: 15000000 INFO @ Mon, 10 Aug 2020 13:20:21: 26000000 INFO @ Mon, 10 Aug 2020 13:20:24: 21000000 INFO @ Mon, 10 Aug 2020 13:20:24: 16000000 INFO @ Mon, 10 Aug 2020 13:20:27: 27000000 INFO @ Mon, 10 Aug 2020 13:20:30: 22000000 INFO @ Mon, 10 Aug 2020 13:20:30: 17000000 INFO @ Mon, 10 Aug 2020 13:20:33: 28000000 INFO @ Mon, 10 Aug 2020 13:20:36: 23000000 INFO @ Mon, 10 Aug 2020 13:20:36: 18000000 INFO @ Mon, 10 Aug 2020 13:20:38: 29000000 INFO @ Mon, 10 Aug 2020 13:20:42: 24000000 INFO @ Mon, 10 Aug 2020 13:20:42: 19000000 INFO @ Mon, 10 Aug 2020 13:20:44: 30000000 INFO @ Mon, 10 Aug 2020 13:20:48: 25000000 INFO @ Mon, 10 Aug 2020 13:20:48: 20000000 INFO @ Mon, 10 Aug 2020 13:20:50: 31000000 INFO @ Mon, 10 Aug 2020 13:20:54: 26000000 INFO @ Mon, 10 Aug 2020 13:20:54: 21000000 INFO @ Mon, 10 Aug 2020 13:20:56: 32000000 INFO @ Mon, 10 Aug 2020 13:21:00: 27000000 INFO @ Mon, 10 Aug 2020 13:21:00: 22000000 INFO @ Mon, 10 Aug 2020 13:21:02: 33000000 INFO @ Mon, 10 Aug 2020 13:21:06: 28000000 INFO @ Mon, 10 Aug 2020 13:21:06: 23000000 INFO @ Mon, 10 Aug 2020 13:21:08: 34000000 INFO @ Mon, 10 Aug 2020 13:21:12: 29000000 INFO @ Mon, 10 Aug 2020 13:21:12: 24000000 INFO @ Mon, 10 Aug 2020 13:21:14: 35000000 INFO @ Mon, 10 Aug 2020 13:21:18: 30000000 INFO @ Mon, 10 Aug 2020 13:21:18: 25000000 INFO @ Mon, 10 Aug 2020 13:21:20: 36000000 INFO @ Mon, 10 Aug 2020 13:21:24: 31000000 INFO @ Mon, 10 Aug 2020 13:21:24: 26000000 INFO @ Mon, 10 Aug 2020 13:21:25: 37000000 INFO @ Mon, 10 Aug 2020 13:21:30: 32000000 INFO @ Mon, 10 Aug 2020 13:21:30: 27000000 INFO @ Mon, 10 Aug 2020 13:21:31: 38000000 INFO @ Mon, 10 Aug 2020 13:21:36: 33000000 INFO @ Mon, 10 Aug 2020 13:21:36: 28000000 INFO @ Mon, 10 Aug 2020 13:21:37: 39000000 INFO @ Mon, 10 Aug 2020 13:21:41: 34000000 INFO @ Mon, 10 Aug 2020 13:21:42: 29000000 INFO @ Mon, 10 Aug 2020 13:21:43: 40000000 INFO @ Mon, 10 Aug 2020 13:21:47: 35000000 INFO @ Mon, 10 Aug 2020 13:21:48: 30000000 INFO @ Mon, 10 Aug 2020 13:21:49: 41000000 INFO @ Mon, 10 Aug 2020 13:21:53: 36000000 INFO @ Mon, 10 Aug 2020 13:21:53: 31000000 INFO @ Mon, 10 Aug 2020 13:21:55: 42000000 INFO @ Mon, 10 Aug 2020 13:21:59: 37000000 INFO @ Mon, 10 Aug 2020 13:21:59: 32000000 INFO @ Mon, 10 Aug 2020 13:22:01: 43000000 INFO @ Mon, 10 Aug 2020 13:22:05: 38000000 INFO @ Mon, 10 Aug 2020 13:22:05: 33000000 INFO @ Mon, 10 Aug 2020 13:22:07: 44000000 INFO @ Mon, 10 Aug 2020 13:22:11: 39000000 INFO @ Mon, 10 Aug 2020 13:22:11: 34000000 INFO @ Mon, 10 Aug 2020 13:22:12: 45000000 INFO @ Mon, 10 Aug 2020 13:22:17: 40000000 INFO @ Mon, 10 Aug 2020 13:22:17: 35000000 INFO @ Mon, 10 Aug 2020 13:22:19: 46000000 INFO @ Mon, 10 Aug 2020 13:22:23: 41000000 INFO @ Mon, 10 Aug 2020 13:22:23: 36000000 INFO @ Mon, 10 Aug 2020 13:22:25: 47000000 INFO @ Mon, 10 Aug 2020 13:22:30: 42000000 INFO @ Mon, 10 Aug 2020 13:22:30: 37000000 INFO @ Mon, 10 Aug 2020 13:22:32: 48000000 INFO @ Mon, 10 Aug 2020 13:22:36: 43000000 INFO @ Mon, 10 Aug 2020 13:22:36: 38000000 INFO @ Mon, 10 Aug 2020 13:22:37: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:22:37: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:22:37: #1 total tags in treatment: 48762913 INFO @ Mon, 10 Aug 2020 13:22:37: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:22:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:22:38: #1 tags after filtering in treatment: 48762843 INFO @ Mon, 10 Aug 2020 13:22:38: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:22:38: #1 finished! INFO @ Mon, 10 Aug 2020 13:22:38: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:22:38: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:22:42: 39000000 INFO @ Mon, 10 Aug 2020 13:22:42: 44000000 INFO @ Mon, 10 Aug 2020 13:22:42: #2 number of paired peaks: 18196 INFO @ Mon, 10 Aug 2020 13:22:42: start model_add_line... INFO @ Mon, 10 Aug 2020 13:22:43: start X-correlation... INFO @ Mon, 10 Aug 2020 13:22:43: end of X-cor INFO @ Mon, 10 Aug 2020 13:22:43: #2 finished! INFO @ Mon, 10 Aug 2020 13:22:43: #2 predicted fragment length is 94 bps INFO @ Mon, 10 Aug 2020 13:22:43: #2 alternative fragment length(s) may be 94 bps INFO @ Mon, 10 Aug 2020 13:22:43: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.05_model.r WARNING @ Mon, 10 Aug 2020 13:22:43: #2 Since the d (94) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:22:43: #2 You may need to consider one of the other alternative d(s): 94 WARNING @ Mon, 10 Aug 2020 13:22:43: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:22:43: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:22:43: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:22:48: 40000000 INFO @ Mon, 10 Aug 2020 13:22:48: 45000000 INFO @ Mon, 10 Aug 2020 13:22:54: 46000000 INFO @ Mon, 10 Aug 2020 13:22:54: 41000000 INFO @ Mon, 10 Aug 2020 13:23:00: 42000000 INFO @ Mon, 10 Aug 2020 13:23:00: 47000000 INFO @ Mon, 10 Aug 2020 13:23:06: 43000000 INFO @ Mon, 10 Aug 2020 13:23:06: 48000000 INFO @ Mon, 10 Aug 2020 13:23:11: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:23:11: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:23:11: #1 total tags in treatment: 48762913 INFO @ Mon, 10 Aug 2020 13:23:11: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:23:11: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:23:12: #1 tags after filtering in treatment: 48762843 INFO @ Mon, 10 Aug 2020 13:23:12: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:23:12: #1 finished! INFO @ Mon, 10 Aug 2020 13:23:12: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:23:12: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:23:12: 44000000 INFO @ Mon, 10 Aug 2020 13:23:16: #2 number of paired peaks: 18196 INFO @ Mon, 10 Aug 2020 13:23:16: start model_add_line... INFO @ Mon, 10 Aug 2020 13:23:16: start X-correlation... INFO @ Mon, 10 Aug 2020 13:23:16: end of X-cor INFO @ Mon, 10 Aug 2020 13:23:16: #2 finished! INFO @ Mon, 10 Aug 2020 13:23:16: #2 predicted fragment length is 94 bps INFO @ Mon, 10 Aug 2020 13:23:16: #2 alternative fragment length(s) may be 94 bps INFO @ Mon, 10 Aug 2020 13:23:16: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.10_model.r WARNING @ Mon, 10 Aug 2020 13:23:16: #2 Since the d (94) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:23:16: #2 You may need to consider one of the other alternative d(s): 94 WARNING @ Mon, 10 Aug 2020 13:23:16: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:23:16: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:23:16: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:23:17: 45000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Mon, 10 Aug 2020 13:23:23: 46000000 INFO @ Mon, 10 Aug 2020 13:23:28: 47000000 INFO @ Mon, 10 Aug 2020 13:23:34: 48000000 INFO @ Mon, 10 Aug 2020 13:23:38: #1 tag size is determined as 50 bps INFO @ Mon, 10 Aug 2020 13:23:38: #1 tag size = 50 INFO @ Mon, 10 Aug 2020 13:23:38: #1 total tags in treatment: 48762913 INFO @ Mon, 10 Aug 2020 13:23:38: #1 user defined the maximum tags... INFO @ Mon, 10 Aug 2020 13:23:38: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Mon, 10 Aug 2020 13:23:39: #1 tags after filtering in treatment: 48762843 INFO @ Mon, 10 Aug 2020 13:23:39: #1 Redundant rate of treatment: 0.00 INFO @ Mon, 10 Aug 2020 13:23:39: #1 finished! INFO @ Mon, 10 Aug 2020 13:23:39: #2 Build Peak Model... INFO @ Mon, 10 Aug 2020 13:23:39: #2 looking for paired plus/minus strand peaks... INFO @ Mon, 10 Aug 2020 13:23:44: #2 number of paired peaks: 18196 INFO @ Mon, 10 Aug 2020 13:23:44: start model_add_line... INFO @ Mon, 10 Aug 2020 13:23:44: start X-correlation... INFO @ Mon, 10 Aug 2020 13:23:44: end of X-cor INFO @ Mon, 10 Aug 2020 13:23:44: #2 finished! INFO @ Mon, 10 Aug 2020 13:23:44: #2 predicted fragment length is 94 bps INFO @ Mon, 10 Aug 2020 13:23:44: #2 alternative fragment length(s) may be 94 bps INFO @ Mon, 10 Aug 2020 13:23:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.20_model.r WARNING @ Mon, 10 Aug 2020 13:23:44: #2 Since the d (94) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Mon, 10 Aug 2020 13:23:44: #2 You may need to consider one of the other alternative d(s): 94 WARNING @ Mon, 10 Aug 2020 13:23:44: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Mon, 10 Aug 2020 13:23:44: #3 Call peaks... INFO @ Mon, 10 Aug 2020 13:23:44: #3 Pre-compute pvalue-qvalue table... INFO @ Mon, 10 Aug 2020 13:24:31: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:24:58: #3 Call peaks for each chromosome... BigWig に変換しました。 INFO @ Mon, 10 Aug 2020 13:25:29: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.05_peaks.xls INFO @ Mon, 10 Aug 2020 13:25:29: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.05_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:25:29: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.05_summits.bed INFO @ Mon, 10 Aug 2020 13:25:29: Done! pass1 - making usageList (100 chroms): 4 millis pass2 - checking and writing primary data (17914 records, 4 fields): 19 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 13:25:35: #3 Call peaks for each chromosome... INFO @ Mon, 10 Aug 2020 13:25:54: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.10_peaks.xls INFO @ Mon, 10 Aug 2020 13:25:54: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.10_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:25:54: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.10_summits.bed INFO @ Mon, 10 Aug 2020 13:25:54: Done! pass1 - making usageList (63 chroms): 2 millis pass2 - checking and writing primary data (8437 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Mon, 10 Aug 2020 13:26:32: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.20_peaks.xls INFO @ Mon, 10 Aug 2020 13:26:32: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.20_peaks.narrowPeak INFO @ Mon, 10 Aug 2020 13:26:32: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX8047585/SRX8047585.20_summits.bed INFO @ Mon, 10 Aug 2020 13:26:32: Done! pass1 - making usageList (42 chroms): 1 millis pass2 - checking and writing primary data (1521 records, 4 fields): 4 millis CompletedMACS2peakCalling