Job ID = 11632720 sra ファイルのダウンロード中... Completed: 964129K bytes transferred in 12 seconds (626282K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: SINGLE fastq に変換中... Read 65437169 spots for /home/okishinya/chipatlas/results/rn6/SRX3782479/SRR6826297.sra Written 65437169 spots for /home/okishinya/chipatlas/results/rn6/SRX3782479/SRR6826297.sra rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:28:35 65437169 reads; of these: 65437169 (100.00%) were unpaired; of these: 3905638 (5.97%) aligned 0 times 46396596 (70.90%) aligned exactly 1 time 15134935 (23.13%) aligned >1 times 94.03% overall alignment rate Time searching: 00:28:39 Overall time: 00:28:39 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 16 files... [bam_rmdupse_core] 2332719 / 61531531 = 0.0379 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 15 Feb 2019 07:18:37: # Command line: callpeak -t SRX3782479.bam -f BAM -g 2.15e9 -n SRX3782479.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX3782479.10 # format = BAM # ChIP-seq file = ['SRX3782479.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 07:18:37: # Command line: callpeak -t SRX3782479.bam -f BAM -g 2.15e9 -n SRX3782479.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX3782479.20 # format = BAM # ChIP-seq file = ['SRX3782479.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 07:18:37: #1 read tag files... INFO @ Fri, 15 Feb 2019 07:18:37: #1 read tag files... INFO @ Fri, 15 Feb 2019 07:18:37: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 07:18:37: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 07:18:37: # Command line: callpeak -t SRX3782479.bam -f BAM -g 2.15e9 -n SRX3782479.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX3782479.05 # format = BAM # ChIP-seq file = ['SRX3782479.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 15 Feb 2019 07:18:37: #1 read tag files... INFO @ Fri, 15 Feb 2019 07:18:37: #1 read treatment tags... INFO @ Fri, 15 Feb 2019 07:18:44: 1000000 INFO @ Fri, 15 Feb 2019 07:18:45: 1000000 INFO @ Fri, 15 Feb 2019 07:18:45: 1000000 INFO @ Fri, 15 Feb 2019 07:18:51: 2000000 INFO @ Fri, 15 Feb 2019 07:18:52: 2000000 INFO @ Fri, 15 Feb 2019 07:18:52: 2000000 INFO @ Fri, 15 Feb 2019 07:18:58: 3000000 INFO @ Fri, 15 Feb 2019 07:18:59: 3000000 INFO @ Fri, 15 Feb 2019 07:18:59: 3000000 INFO @ Fri, 15 Feb 2019 07:19:06: 4000000 INFO @ Fri, 15 Feb 2019 07:19:06: 4000000 INFO @ Fri, 15 Feb 2019 07:19:06: 4000000 INFO @ Fri, 15 Feb 2019 07:19:13: 5000000 INFO @ Fri, 15 Feb 2019 07:19:13: 5000000 INFO @ Fri, 15 Feb 2019 07:19:13: 5000000 INFO @ Fri, 15 Feb 2019 07:19:20: 6000000 INFO @ Fri, 15 Feb 2019 07:19:21: 6000000 INFO @ Fri, 15 Feb 2019 07:19:21: 6000000 INFO @ Fri, 15 Feb 2019 07:19:27: 7000000 INFO @ Fri, 15 Feb 2019 07:19:28: 7000000 INFO @ Fri, 15 Feb 2019 07:19:28: 7000000 INFO @ Fri, 15 Feb 2019 07:19:34: 8000000 INFO @ Fri, 15 Feb 2019 07:19:35: 8000000 INFO @ Fri, 15 Feb 2019 07:19:35: 8000000 INFO @ Fri, 15 Feb 2019 07:19:41: 9000000 INFO @ Fri, 15 Feb 2019 07:19:42: 9000000 INFO @ Fri, 15 Feb 2019 07:19:42: 9000000 INFO @ Fri, 15 Feb 2019 07:19:48: 10000000 INFO @ Fri, 15 Feb 2019 07:19:49: 10000000 INFO @ Fri, 15 Feb 2019 07:19:49: 10000000 INFO @ Fri, 15 Feb 2019 07:19:56: 11000000 INFO @ Fri, 15 Feb 2019 07:19:57: 11000000 INFO @ Fri, 15 Feb 2019 07:19:57: 11000000 INFO @ Fri, 15 Feb 2019 07:20:03: 12000000 INFO @ Fri, 15 Feb 2019 07:20:05: 12000000 INFO @ Fri, 15 Feb 2019 07:20:05: 12000000 INFO @ Fri, 15 Feb 2019 07:20:10: 13000000 INFO @ Fri, 15 Feb 2019 07:20:13: 13000000 INFO @ Fri, 15 Feb 2019 07:20:13: 13000000 INFO @ Fri, 15 Feb 2019 07:20:17: 14000000 INFO @ Fri, 15 Feb 2019 07:20:21: 14000000 INFO @ Fri, 15 Feb 2019 07:20:21: 14000000 INFO @ Fri, 15 Feb 2019 07:20:25: 15000000 INFO @ Fri, 15 Feb 2019 07:20:29: 15000000 INFO @ Fri, 15 Feb 2019 07:20:29: 15000000 INFO @ Fri, 15 Feb 2019 07:20:32: 16000000 INFO @ Fri, 15 Feb 2019 07:20:36: 16000000 INFO @ Fri, 15 Feb 2019 07:20:36: 16000000 INFO @ Fri, 15 Feb 2019 07:20:39: 17000000 INFO @ Fri, 15 Feb 2019 07:20:43: 17000000 INFO @ Fri, 15 Feb 2019 07:20:43: 17000000 INFO @ Fri, 15 Feb 2019 07:20:46: 18000000 INFO @ Fri, 15 Feb 2019 07:20:50: 18000000 INFO @ Fri, 15 Feb 2019 07:20:50: 18000000 INFO @ Fri, 15 Feb 2019 07:20:53: 19000000 INFO @ Fri, 15 Feb 2019 07:20:58: 19000000 INFO @ Fri, 15 Feb 2019 07:20:58: 19000000 INFO @ Fri, 15 Feb 2019 07:21:00: 20000000 INFO @ Fri, 15 Feb 2019 07:21:05: 20000000 INFO @ Fri, 15 Feb 2019 07:21:05: 20000000 INFO @ Fri, 15 Feb 2019 07:21:07: 21000000 INFO @ Fri, 15 Feb 2019 07:21:12: 21000000 INFO @ Fri, 15 Feb 2019 07:21:12: 21000000 INFO @ Fri, 15 Feb 2019 07:21:15: 22000000 INFO @ Fri, 15 Feb 2019 07:21:20: 22000000 INFO @ Fri, 15 Feb 2019 07:21:20: 22000000 INFO @ Fri, 15 Feb 2019 07:21:22: 23000000 INFO @ Fri, 15 Feb 2019 07:21:27: 23000000 INFO @ Fri, 15 Feb 2019 07:21:27: 23000000 INFO @ Fri, 15 Feb 2019 07:21:29: 24000000 INFO @ Fri, 15 Feb 2019 07:21:35: 24000000 INFO @ Fri, 15 Feb 2019 07:21:35: 24000000 INFO @ Fri, 15 Feb 2019 07:21:36: 25000000 INFO @ Fri, 15 Feb 2019 07:21:43: 25000000 INFO @ Fri, 15 Feb 2019 07:21:43: 25000000 INFO @ Fri, 15 Feb 2019 07:21:43: 26000000 INFO @ Fri, 15 Feb 2019 07:21:51: 27000000 INFO @ Fri, 15 Feb 2019 07:21:51: 26000000 INFO @ Fri, 15 Feb 2019 07:21:51: 26000000 INFO @ Fri, 15 Feb 2019 07:21:58: 28000000 INFO @ Fri, 15 Feb 2019 07:21:59: 27000000 INFO @ Fri, 15 Feb 2019 07:21:59: 27000000 INFO @ Fri, 15 Feb 2019 07:22:05: 29000000 INFO @ Fri, 15 Feb 2019 07:22:06: 28000000 INFO @ Fri, 15 Feb 2019 07:22:07: 28000000 INFO @ Fri, 15 Feb 2019 07:22:13: 29000000 INFO @ Fri, 15 Feb 2019 07:22:13: 30000000 INFO @ Fri, 15 Feb 2019 07:22:14: 29000000 INFO @ Fri, 15 Feb 2019 07:22:20: 30000000 INFO @ Fri, 15 Feb 2019 07:22:21: 30000000 INFO @ Fri, 15 Feb 2019 07:22:21: 31000000 INFO @ Fri, 15 Feb 2019 07:22:27: 31000000 INFO @ Fri, 15 Feb 2019 07:22:28: 31000000 INFO @ Fri, 15 Feb 2019 07:22:29: 32000000 INFO @ Fri, 15 Feb 2019 07:22:34: 32000000 INFO @ Fri, 15 Feb 2019 07:22:36: 32000000 INFO @ Fri, 15 Feb 2019 07:22:38: 33000000 INFO @ Fri, 15 Feb 2019 07:22:41: 33000000 INFO @ Fri, 15 Feb 2019 07:22:44: 33000000 INFO @ Fri, 15 Feb 2019 07:22:45: 34000000 INFO @ Fri, 15 Feb 2019 07:22:48: 34000000 INFO @ Fri, 15 Feb 2019 07:22:51: 34000000 INFO @ Fri, 15 Feb 2019 07:22:53: 35000000 INFO @ Fri, 15 Feb 2019 07:22:55: 35000000 INFO @ Fri, 15 Feb 2019 07:22:59: 35000000 INFO @ Fri, 15 Feb 2019 07:23:01: 36000000 INFO @ Fri, 15 Feb 2019 07:23:02: 36000000 INFO @ Fri, 15 Feb 2019 07:23:07: 36000000 INFO @ Fri, 15 Feb 2019 07:23:08: 37000000 INFO @ Fri, 15 Feb 2019 07:23:10: 37000000 INFO @ Fri, 15 Feb 2019 07:23:15: 38000000 INFO @ Fri, 15 Feb 2019 07:23:16: 37000000 INFO @ Fri, 15 Feb 2019 07:23:19: 38000000 INFO @ Fri, 15 Feb 2019 07:23:22: 39000000 INFO @ Fri, 15 Feb 2019 07:23:24: 38000000 INFO @ Fri, 15 Feb 2019 07:23:28: 39000000 INFO @ Fri, 15 Feb 2019 07:23:29: 40000000 INFO @ Fri, 15 Feb 2019 07:23:32: 39000000 INFO @ Fri, 15 Feb 2019 07:23:36: 41000000 INFO @ Fri, 15 Feb 2019 07:23:36: 40000000 INFO @ Fri, 15 Feb 2019 07:23:40: 40000000 INFO @ Fri, 15 Feb 2019 07:23:43: 42000000 INFO @ Fri, 15 Feb 2019 07:23:44: 41000000 INFO @ Fri, 15 Feb 2019 07:23:47: 41000000 INFO @ Fri, 15 Feb 2019 07:23:49: 43000000 INFO @ Fri, 15 Feb 2019 07:23:52: 42000000 INFO @ Fri, 15 Feb 2019 07:23:55: 42000000 INFO @ Fri, 15 Feb 2019 07:23:56: 44000000 INFO @ Fri, 15 Feb 2019 07:23:59: 43000000 INFO @ Fri, 15 Feb 2019 07:24:02: 43000000 INFO @ Fri, 15 Feb 2019 07:24:03: 45000000 INFO @ Fri, 15 Feb 2019 07:24:08: 44000000 INFO @ Fri, 15 Feb 2019 07:24:10: 46000000 INFO @ Fri, 15 Feb 2019 07:24:10: 44000000 INFO @ Fri, 15 Feb 2019 07:24:15: 45000000 INFO @ Fri, 15 Feb 2019 07:24:17: 47000000 INFO @ Fri, 15 Feb 2019 07:24:18: 45000000 INFO @ Fri, 15 Feb 2019 07:24:23: 46000000 INFO @ Fri, 15 Feb 2019 07:24:24: 48000000 INFO @ Fri, 15 Feb 2019 07:24:25: 46000000 INFO @ Fri, 15 Feb 2019 07:24:31: 49000000 INFO @ Fri, 15 Feb 2019 07:24:31: 47000000 INFO @ Fri, 15 Feb 2019 07:24:33: 47000000 INFO @ Fri, 15 Feb 2019 07:24:38: 50000000 INFO @ Fri, 15 Feb 2019 07:24:39: 48000000 INFO @ Fri, 15 Feb 2019 07:24:40: 48000000 INFO @ Fri, 15 Feb 2019 07:24:45: 51000000 INFO @ Fri, 15 Feb 2019 07:24:47: 49000000 INFO @ Fri, 15 Feb 2019 07:24:48: 49000000 INFO @ Fri, 15 Feb 2019 07:24:53: 52000000 INFO @ Fri, 15 Feb 2019 07:24:55: 50000000 INFO @ Fri, 15 Feb 2019 07:24:55: 50000000 INFO @ Fri, 15 Feb 2019 07:25:01: 53000000 INFO @ Fri, 15 Feb 2019 07:25:03: 51000000 INFO @ Fri, 15 Feb 2019 07:25:03: 51000000 INFO @ Fri, 15 Feb 2019 07:25:09: 54000000 INFO @ Fri, 15 Feb 2019 07:25:10: 52000000 INFO @ Fri, 15 Feb 2019 07:25:11: 52000000 INFO @ Fri, 15 Feb 2019 07:25:17: 53000000 INFO @ Fri, 15 Feb 2019 07:25:17: 55000000 INFO @ Fri, 15 Feb 2019 07:25:19: 53000000 INFO @ Fri, 15 Feb 2019 07:25:24: 54000000 INFO @ Fri, 15 Feb 2019 07:25:25: 56000000 INFO @ Fri, 15 Feb 2019 07:25:27: 54000000 INFO @ Fri, 15 Feb 2019 07:25:31: 55000000 INFO @ Fri, 15 Feb 2019 07:25:34: 57000000 INFO @ Fri, 15 Feb 2019 07:25:35: 55000000 INFO @ Fri, 15 Feb 2019 07:25:38: 56000000 INFO @ Fri, 15 Feb 2019 07:25:42: 58000000 INFO @ Fri, 15 Feb 2019 07:25:43: 56000000 INFO @ Fri, 15 Feb 2019 07:25:45: 57000000 INFO @ Fri, 15 Feb 2019 07:25:50: 59000000 INFO @ Fri, 15 Feb 2019 07:25:52: 57000000 INFO @ Fri, 15 Feb 2019 07:25:52: 58000000 INFO @ Fri, 15 Feb 2019 07:25:52: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:25:52: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:25:52: #1 total tags in treatment: 59198812 INFO @ Fri, 15 Feb 2019 07:25:52: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:25:52: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:25:54: #1 tags after filtering in treatment: 59198750 INFO @ Fri, 15 Feb 2019 07:25:54: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:25:54: #1 finished! INFO @ Fri, 15 Feb 2019 07:25:54: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:25:54: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:25:59: #2 number of paired peaks: 3403 INFO @ Fri, 15 Feb 2019 07:25:59: start model_add_line... INFO @ Fri, 15 Feb 2019 07:25:59: 59000000 INFO @ Fri, 15 Feb 2019 07:25:59: 58000000 INFO @ Fri, 15 Feb 2019 07:25:59: start X-correlation... INFO @ Fri, 15 Feb 2019 07:25:59: end of X-cor INFO @ Fri, 15 Feb 2019 07:25:59: #2 finished! INFO @ Fri, 15 Feb 2019 07:25:59: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:25:59: #2 alternative fragment length(s) may be 39,582 bps INFO @ Fri, 15 Feb 2019 07:25:59: #2.2 Generate R script for model : SRX3782479.05_model.r WARNING @ Fri, 15 Feb 2019 07:25:59: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:25:59: #2 You may need to consider one of the other alternative d(s): 39,582 WARNING @ Fri, 15 Feb 2019 07:25:59: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:25:59: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:25:59: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:26:00: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:26:00: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:26:00: #1 total tags in treatment: 59198812 INFO @ Fri, 15 Feb 2019 07:26:00: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:26:00: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:26:02: #1 tags after filtering in treatment: 59198750 INFO @ Fri, 15 Feb 2019 07:26:02: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:26:02: #1 finished! INFO @ Fri, 15 Feb 2019 07:26:02: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:26:02: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:26:06: 59000000 INFO @ Fri, 15 Feb 2019 07:26:07: #2 number of paired peaks: 3403 INFO @ Fri, 15 Feb 2019 07:26:07: start model_add_line... INFO @ Fri, 15 Feb 2019 07:26:07: start X-correlation... INFO @ Fri, 15 Feb 2019 07:26:07: end of X-cor INFO @ Fri, 15 Feb 2019 07:26:07: #2 finished! INFO @ Fri, 15 Feb 2019 07:26:07: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:26:07: #2 alternative fragment length(s) may be 39,582 bps INFO @ Fri, 15 Feb 2019 07:26:07: #2.2 Generate R script for model : SRX3782479.20_model.r WARNING @ Fri, 15 Feb 2019 07:26:07: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:26:07: #2 You may need to consider one of the other alternative d(s): 39,582 WARNING @ Fri, 15 Feb 2019 07:26:07: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:26:07: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:26:07: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:26:08: #1 tag size is determined as 40 bps INFO @ Fri, 15 Feb 2019 07:26:08: #1 tag size = 40 INFO @ Fri, 15 Feb 2019 07:26:08: #1 total tags in treatment: 59198812 INFO @ Fri, 15 Feb 2019 07:26:08: #1 user defined the maximum tags... INFO @ Fri, 15 Feb 2019 07:26:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 15 Feb 2019 07:26:10: #1 tags after filtering in treatment: 59198750 INFO @ Fri, 15 Feb 2019 07:26:10: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 15 Feb 2019 07:26:10: #1 finished! INFO @ Fri, 15 Feb 2019 07:26:10: #2 Build Peak Model... INFO @ Fri, 15 Feb 2019 07:26:10: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 15 Feb 2019 07:26:15: #2 number of paired peaks: 3403 INFO @ Fri, 15 Feb 2019 07:26:15: start model_add_line... INFO @ Fri, 15 Feb 2019 07:26:16: start X-correlation... INFO @ Fri, 15 Feb 2019 07:26:16: end of X-cor INFO @ Fri, 15 Feb 2019 07:26:16: #2 finished! INFO @ Fri, 15 Feb 2019 07:26:16: #2 predicted fragment length is 39 bps INFO @ Fri, 15 Feb 2019 07:26:16: #2 alternative fragment length(s) may be 39,582 bps INFO @ Fri, 15 Feb 2019 07:26:16: #2.2 Generate R script for model : SRX3782479.10_model.r WARNING @ Fri, 15 Feb 2019 07:26:16: #2 Since the d (39) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 15 Feb 2019 07:26:16: #2 You may need to consider one of the other alternative d(s): 39,582 WARNING @ Fri, 15 Feb 2019 07:26:16: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 15 Feb 2019 07:26:16: #3 Call peaks... INFO @ Fri, 15 Feb 2019 07:26:16: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 15 Feb 2019 07:28:21: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:28:32: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:28:36: #3 Call peaks for each chromosome... INFO @ Fri, 15 Feb 2019 07:29:49: #4 Write output xls file... SRX3782479.05_peaks.xls INFO @ Fri, 15 Feb 2019 07:29:49: #4 Write peak in narrowPeak format file... SRX3782479.05_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:29:49: #4 Write summits bed file... SRX3782479.05_summits.bed INFO @ Fri, 15 Feb 2019 07:29:49: Done! pass1 - making usageList (53 chroms): 9 millis pass2 - checking and writing primary data (2414 records, 4 fields): 17 millis CompletedMACS2peakCalling INFO @ Fri, 15 Feb 2019 07:29:55: #4 Write output xls file... SRX3782479.20_peaks.xls INFO @ Fri, 15 Feb 2019 07:29:55: #4 Write peak in narrowPeak format file... SRX3782479.20_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:29:55: #4 Write summits bed file... SRX3782479.20_summits.bed INFO @ Fri, 15 Feb 2019 07:29:55: Done! pass1 - making usageList (34 chroms): 4 millis pass2 - checking and writing primary data (616 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Fri, 15 Feb 2019 07:29:57: #4 Write output xls file... SRX3782479.10_peaks.xls INFO @ Fri, 15 Feb 2019 07:29:57: #4 Write peak in narrowPeak format file... SRX3782479.10_peaks.narrowPeak INFO @ Fri, 15 Feb 2019 07:29:57: #4 Write summits bed file... SRX3782479.10_summits.bed INFO @ Fri, 15 Feb 2019 07:29:57: Done! pass1 - making usageList (43 chroms): 2 millis pass2 - checking and writing primary data (1399 records, 4 fields): 7 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。