Job ID = 10194831 sra ファイルのダウンロード中... Completed: 1716818K bytes transferred in 28 seconds (495042K bits/sec), in 1 file. sra ファイルのダウンロードが完了しました。 Read layout: SINGLE fastq に変換中... Written 83324250 spots for /home/okishinya/chipatlas/results/rn6/SRX1977121/SRR3952253.sra Written 83324250 spots total rm: cannot remove `[DSE]RX*': そのようなファイルやディレクトリはありません rm: cannot remove `[DSE]RR*.fastq': そのようなファイルやディレクトリはありません fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:18:49 83324250 reads; of these: 83324250 (100.00%) were unpaired; of these: 15296929 (18.36%) aligned 0 times 36265020 (43.52%) aligned exactly 1 time 31762301 (38.12%) aligned >1 times 81.64% overall alignment rate Time searching: 02:18:51 Overall time: 02:18:51 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 28 files... [bam_rmdupse_core] 6644371 / 68027321 = 0.0977 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Sat, 11 Nov 2017 03:41:12: # Command line: callpeak -t SRX1977121.bam -f BAM -g 2.15e9 -n SRX1977121.05 -q 1e-05 # ARGUMENTS LIST: # name = SRX1977121.05 # format = BAM # ChIP-seq file = ['SRX1977121.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Nov 2017 03:41:12: # Command line: callpeak -t SRX1977121.bam -f BAM -g 2.15e9 -n SRX1977121.10 -q 1e-10 # ARGUMENTS LIST: # name = SRX1977121.10 # format = BAM # ChIP-seq file = ['SRX1977121.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Nov 2017 03:41:12: # Command line: callpeak -t SRX1977121.bam -f BAM -g 2.15e9 -n SRX1977121.20 -q 1e-20 # ARGUMENTS LIST: # name = SRX1977121.20 # format = BAM # ChIP-seq file = ['SRX1977121.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 11 Nov 2017 03:41:12: #1 read tag files... INFO @ Sat, 11 Nov 2017 03:41:12: #1 read tag files... INFO @ Sat, 11 Nov 2017 03:41:12: #1 read tag files... INFO @ Sat, 11 Nov 2017 03:41:12: #1 read treatment tags... INFO @ Sat, 11 Nov 2017 03:41:12: #1 read treatment tags... INFO @ Sat, 11 Nov 2017 03:41:12: #1 read treatment tags... INFO @ Sat, 11 Nov 2017 03:41:20: 1000000 INFO @ Sat, 11 Nov 2017 03:41:20: 1000000 INFO @ Sat, 11 Nov 2017 03:41:20: 1000000 INFO @ Sat, 11 Nov 2017 03:41:27: 2000000 INFO @ Sat, 11 Nov 2017 03:41:27: 2000000 INFO @ Sat, 11 Nov 2017 03:41:28: 2000000 INFO @ Sat, 11 Nov 2017 03:41:34: 3000000 INFO @ Sat, 11 Nov 2017 03:41:34: 3000000 INFO @ Sat, 11 Nov 2017 03:41:35: 3000000 INFO @ Sat, 11 Nov 2017 03:41:41: 4000000 INFO @ Sat, 11 Nov 2017 03:41:42: 4000000 INFO @ Sat, 11 Nov 2017 03:41:43: 4000000 INFO @ Sat, 11 Nov 2017 03:41:49: 5000000 INFO @ Sat, 11 Nov 2017 03:41:49: 5000000 INFO @ Sat, 11 Nov 2017 03:41:51: 5000000 INFO @ Sat, 11 Nov 2017 03:41:56: 6000000 INFO @ Sat, 11 Nov 2017 03:41:57: 6000000 INFO @ Sat, 11 Nov 2017 03:41:59: 6000000 INFO @ Sat, 11 Nov 2017 03:42:03: 7000000 INFO @ Sat, 11 Nov 2017 03:42:05: 7000000 INFO @ Sat, 11 Nov 2017 03:42:08: 7000000 INFO @ Sat, 11 Nov 2017 03:42:11: 8000000 INFO @ Sat, 11 Nov 2017 03:42:14: 8000000 INFO @ Sat, 11 Nov 2017 03:42:16: 8000000 INFO @ Sat, 11 Nov 2017 03:42:18: 9000000 INFO @ Sat, 11 Nov 2017 03:42:22: 9000000 INFO @ Sat, 11 Nov 2017 03:42:24: 9000000 INFO @ Sat, 11 Nov 2017 03:42:25: 10000000 INFO @ Sat, 11 Nov 2017 03:42:30: 10000000 INFO @ Sat, 11 Nov 2017 03:42:32: 10000000 INFO @ Sat, 11 Nov 2017 03:42:33: 11000000 INFO @ Sat, 11 Nov 2017 03:42:37: 11000000 INFO @ Sat, 11 Nov 2017 03:42:40: 11000000 INFO @ Sat, 11 Nov 2017 03:42:40: 12000000 INFO @ Sat, 11 Nov 2017 03:42:45: 12000000 INFO @ Sat, 11 Nov 2017 03:42:47: 12000000 INFO @ Sat, 11 Nov 2017 03:42:48: 13000000 INFO @ Sat, 11 Nov 2017 03:42:52: 13000000 INFO @ Sat, 11 Nov 2017 03:42:55: 13000000 INFO @ Sat, 11 Nov 2017 03:42:55: 14000000 INFO @ Sat, 11 Nov 2017 03:43:00: 14000000 INFO @ Sat, 11 Nov 2017 03:43:03: 15000000 INFO @ Sat, 11 Nov 2017 03:43:03: 14000000 INFO @ Sat, 11 Nov 2017 03:43:08: 15000000 INFO @ Sat, 11 Nov 2017 03:43:10: 16000000 INFO @ Sat, 11 Nov 2017 03:43:11: 15000000 INFO @ Sat, 11 Nov 2017 03:43:15: 16000000 INFO @ Sat, 11 Nov 2017 03:43:17: 17000000 INFO @ Sat, 11 Nov 2017 03:43:18: 16000000 INFO @ Sat, 11 Nov 2017 03:43:23: 17000000 INFO @ Sat, 11 Nov 2017 03:43:25: 18000000 INFO @ Sat, 11 Nov 2017 03:43:26: 17000000 INFO @ Sat, 11 Nov 2017 03:43:31: 18000000 INFO @ Sat, 11 Nov 2017 03:43:33: 19000000 INFO @ Sat, 11 Nov 2017 03:43:34: 18000000 INFO @ Sat, 11 Nov 2017 03:43:38: 19000000 INFO @ Sat, 11 Nov 2017 03:43:40: 20000000 INFO @ Sat, 11 Nov 2017 03:43:41: 19000000 INFO @ Sat, 11 Nov 2017 03:43:46: 20000000 INFO @ Sat, 11 Nov 2017 03:43:48: 21000000 INFO @ Sat, 11 Nov 2017 03:43:49: 20000000 INFO @ Sat, 11 Nov 2017 03:43:53: 21000000 INFO @ Sat, 11 Nov 2017 03:43:56: 22000000 INFO @ Sat, 11 Nov 2017 03:43:57: 21000000 INFO @ Sat, 11 Nov 2017 03:44:01: 22000000 INFO @ Sat, 11 Nov 2017 03:44:03: 23000000 INFO @ Sat, 11 Nov 2017 03:44:04: 22000000 INFO @ Sat, 11 Nov 2017 03:44:08: 23000000 INFO @ Sat, 11 Nov 2017 03:44:11: 24000000 INFO @ Sat, 11 Nov 2017 03:44:12: 23000000 INFO @ Sat, 11 Nov 2017 03:44:16: 24000000 INFO @ Sat, 11 Nov 2017 03:44:18: 25000000 INFO @ Sat, 11 Nov 2017 03:44:20: 24000000 INFO @ Sat, 11 Nov 2017 03:44:23: 25000000 INFO @ Sat, 11 Nov 2017 03:44:25: 26000000 INFO @ Sat, 11 Nov 2017 03:44:28: 25000000 INFO @ Sat, 11 Nov 2017 03:44:31: 26000000 INFO @ Sat, 11 Nov 2017 03:44:33: 27000000 INFO @ Sat, 11 Nov 2017 03:44:35: 26000000 INFO @ Sat, 11 Nov 2017 03:44:39: 27000000 INFO @ Sat, 11 Nov 2017 03:44:41: 28000000 INFO @ Sat, 11 Nov 2017 03:44:43: 27000000 INFO @ Sat, 11 Nov 2017 03:44:46: 28000000 INFO @ Sat, 11 Nov 2017 03:44:48: 29000000 INFO @ Sat, 11 Nov 2017 03:44:51: 28000000 INFO @ Sat, 11 Nov 2017 03:44:54: 29000000 INFO @ Sat, 11 Nov 2017 03:44:56: 30000000 INFO @ Sat, 11 Nov 2017 03:44:58: 29000000 INFO @ Sat, 11 Nov 2017 03:45:01: 30000000 INFO @ Sat, 11 Nov 2017 03:45:03: 31000000 INFO @ Sat, 11 Nov 2017 03:45:06: 30000000 INFO @ Sat, 11 Nov 2017 03:45:09: 31000000 INFO @ Sat, 11 Nov 2017 03:45:11: 32000000 INFO @ Sat, 11 Nov 2017 03:45:14: 31000000 INFO @ Sat, 11 Nov 2017 03:45:16: 32000000 INFO @ Sat, 11 Nov 2017 03:45:18: 33000000 INFO @ Sat, 11 Nov 2017 03:45:21: 32000000 INFO @ Sat, 11 Nov 2017 03:45:24: 33000000 INFO @ Sat, 11 Nov 2017 03:45:25: 34000000 INFO @ Sat, 11 Nov 2017 03:45:29: 33000000 INFO @ Sat, 11 Nov 2017 03:45:32: 34000000 INFO @ Sat, 11 Nov 2017 03:45:33: 35000000 INFO @ Sat, 11 Nov 2017 03:45:37: 34000000 INFO @ Sat, 11 Nov 2017 03:45:39: 35000000 INFO @ Sat, 11 Nov 2017 03:45:40: 36000000 INFO @ Sat, 11 Nov 2017 03:45:45: 35000000 INFO @ Sat, 11 Nov 2017 03:45:47: 36000000 INFO @ Sat, 11 Nov 2017 03:45:48: 37000000 INFO @ Sat, 11 Nov 2017 03:45:52: 36000000 INFO @ Sat, 11 Nov 2017 03:45:55: 37000000 INFO @ Sat, 11 Nov 2017 03:45:55: 38000000 INFO @ Sat, 11 Nov 2017 03:46:00: 37000000 INFO @ Sat, 11 Nov 2017 03:46:02: 38000000 INFO @ Sat, 11 Nov 2017 03:46:02: 39000000 INFO @ Sat, 11 Nov 2017 03:46:08: 38000000 INFO @ Sat, 11 Nov 2017 03:46:10: 40000000 INFO @ Sat, 11 Nov 2017 03:46:10: 39000000 INFO @ Sat, 11 Nov 2017 03:46:15: 39000000 INFO @ Sat, 11 Nov 2017 03:46:17: 41000000 INFO @ Sat, 11 Nov 2017 03:46:17: 40000000 INFO @ Sat, 11 Nov 2017 03:46:23: 40000000 INFO @ Sat, 11 Nov 2017 03:46:25: 42000000 INFO @ Sat, 11 Nov 2017 03:46:25: 41000000 INFO @ Sat, 11 Nov 2017 03:46:31: 41000000 INFO @ Sat, 11 Nov 2017 03:46:32: 43000000 INFO @ Sat, 11 Nov 2017 03:46:33: 42000000 INFO @ Sat, 11 Nov 2017 03:46:39: 42000000 INFO @ Sat, 11 Nov 2017 03:46:39: 44000000 INFO @ Sat, 11 Nov 2017 03:46:40: 43000000 INFO @ Sat, 11 Nov 2017 03:46:46: 43000000 INFO @ Sat, 11 Nov 2017 03:46:47: 45000000 INFO @ Sat, 11 Nov 2017 03:46:48: 44000000 INFO @ Sat, 11 Nov 2017 03:46:54: 44000000 INFO @ Sat, 11 Nov 2017 03:46:54: 46000000 INFO @ Sat, 11 Nov 2017 03:46:56: 45000000 INFO @ Sat, 11 Nov 2017 03:47:02: 45000000 INFO @ Sat, 11 Nov 2017 03:47:02: 47000000 INFO @ Sat, 11 Nov 2017 03:47:03: 46000000 INFO @ Sat, 11 Nov 2017 03:47:09: 48000000 INFO @ Sat, 11 Nov 2017 03:47:10: 46000000 INFO @ Sat, 11 Nov 2017 03:47:11: 47000000 INFO @ Sat, 11 Nov 2017 03:47:17: 49000000 INFO @ Sat, 11 Nov 2017 03:47:17: 47000000 INFO @ Sat, 11 Nov 2017 03:47:19: 48000000 INFO @ Sat, 11 Nov 2017 03:47:24: 50000000 INFO @ Sat, 11 Nov 2017 03:47:25: 48000000 INFO @ Sat, 11 Nov 2017 03:47:26: 49000000 INFO @ Sat, 11 Nov 2017 03:47:32: 51000000 INFO @ Sat, 11 Nov 2017 03:47:33: 49000000 INFO @ Sat, 11 Nov 2017 03:47:34: 50000000 INFO @ Sat, 11 Nov 2017 03:47:39: 52000000 INFO @ Sat, 11 Nov 2017 03:47:40: 50000000 INFO @ Sat, 11 Nov 2017 03:47:42: 51000000 INFO @ Sat, 11 Nov 2017 03:47:47: 53000000 INFO @ Sat, 11 Nov 2017 03:47:48: 51000000 INFO @ Sat, 11 Nov 2017 03:47:49: 52000000 INFO @ Sat, 11 Nov 2017 03:47:54: 54000000 INFO @ Sat, 11 Nov 2017 03:47:56: 52000000 INFO @ Sat, 11 Nov 2017 03:47:57: 53000000 INFO @ Sat, 11 Nov 2017 03:48:02: 55000000 INFO @ Sat, 11 Nov 2017 03:48:04: 53000000 INFO @ Sat, 11 Nov 2017 03:48:05: 54000000 INFO @ Sat, 11 Nov 2017 03:48:09: 56000000 INFO @ Sat, 11 Nov 2017 03:48:11: 54000000 INFO @ Sat, 11 Nov 2017 03:48:12: 55000000 INFO @ Sat, 11 Nov 2017 03:48:17: 57000000 INFO @ Sat, 11 Nov 2017 03:48:19: 55000000 INFO @ Sat, 11 Nov 2017 03:48:20: 56000000 INFO @ Sat, 11 Nov 2017 03:48:25: 58000000 INFO @ Sat, 11 Nov 2017 03:48:27: 56000000 INFO @ Sat, 11 Nov 2017 03:48:28: 57000000 INFO @ Sat, 11 Nov 2017 03:48:32: 59000000 INFO @ Sat, 11 Nov 2017 03:48:35: 57000000 INFO @ Sat, 11 Nov 2017 03:48:35: 58000000 INFO @ Sat, 11 Nov 2017 03:48:39: 60000000 INFO @ Sat, 11 Nov 2017 03:48:43: 58000000 INFO @ Sat, 11 Nov 2017 03:48:43: 59000000 INFO @ Sat, 11 Nov 2017 03:48:47: 61000000 INFO @ Sat, 11 Nov 2017 03:48:50: 59000000 INFO @ Sat, 11 Nov 2017 03:48:50: #1 tag size is determined as 51 bps INFO @ Sat, 11 Nov 2017 03:48:50: #1 tag size = 51 INFO @ Sat, 11 Nov 2017 03:48:50: #1 total tags in treatment: 61382950 INFO @ Sat, 11 Nov 2017 03:48:50: #1 user defined the maximum tags... INFO @ Sat, 11 Nov 2017 03:48:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Nov 2017 03:48:51: 60000000 INFO @ Sat, 11 Nov 2017 03:48:52: #1 tags after filtering in treatment: 61382906 INFO @ Sat, 11 Nov 2017 03:48:52: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 11 Nov 2017 03:48:52: #1 finished! INFO @ Sat, 11 Nov 2017 03:48:52: #2 Build Peak Model... INFO @ Sat, 11 Nov 2017 03:48:52: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Nov 2017 03:48:58: 60000000 INFO @ Sat, 11 Nov 2017 03:48:58: #2 number of paired peaks: 20932 INFO @ Sat, 11 Nov 2017 03:48:58: start model_add_line... INFO @ Sat, 11 Nov 2017 03:48:58: 61000000 INFO @ Sat, 11 Nov 2017 03:48:59: start X-correlation... INFO @ Sat, 11 Nov 2017 03:48:59: end of X-cor INFO @ Sat, 11 Nov 2017 03:48:59: #2 finished! INFO @ Sat, 11 Nov 2017 03:48:59: #2 predicted fragment length is 61 bps INFO @ Sat, 11 Nov 2017 03:48:59: #2 alternative fragment length(s) may be 61 bps INFO @ Sat, 11 Nov 2017 03:48:59: #2.2 Generate R script for model : SRX1977121.05_model.r WARNING @ Sat, 11 Nov 2017 03:48:59: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Nov 2017 03:48:59: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Sat, 11 Nov 2017 03:48:59: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Nov 2017 03:48:59: #3 Call peaks... INFO @ Sat, 11 Nov 2017 03:48:59: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Nov 2017 03:49:02: #1 tag size is determined as 51 bps INFO @ Sat, 11 Nov 2017 03:49:02: #1 tag size = 51 INFO @ Sat, 11 Nov 2017 03:49:02: #1 total tags in treatment: 61382950 INFO @ Sat, 11 Nov 2017 03:49:02: #1 user defined the maximum tags... INFO @ Sat, 11 Nov 2017 03:49:02: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Nov 2017 03:49:03: #1 tags after filtering in treatment: 61382906 INFO @ Sat, 11 Nov 2017 03:49:03: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 11 Nov 2017 03:49:03: #1 finished! INFO @ Sat, 11 Nov 2017 03:49:03: #2 Build Peak Model... INFO @ Sat, 11 Nov 2017 03:49:03: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Nov 2017 03:49:05: 61000000 INFO @ Sat, 11 Nov 2017 03:49:08: #1 tag size is determined as 51 bps INFO @ Sat, 11 Nov 2017 03:49:08: #1 tag size = 51 INFO @ Sat, 11 Nov 2017 03:49:08: #1 total tags in treatment: 61382950 INFO @ Sat, 11 Nov 2017 03:49:08: #1 user defined the maximum tags... INFO @ Sat, 11 Nov 2017 03:49:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 11 Nov 2017 03:49:10: #2 number of paired peaks: 20932 INFO @ Sat, 11 Nov 2017 03:49:10: start model_add_line... INFO @ Sat, 11 Nov 2017 03:49:10: #1 tags after filtering in treatment: 61382906 INFO @ Sat, 11 Nov 2017 03:49:10: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 11 Nov 2017 03:49:10: #1 finished! INFO @ Sat, 11 Nov 2017 03:49:10: #2 Build Peak Model... INFO @ Sat, 11 Nov 2017 03:49:10: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 11 Nov 2017 03:49:11: start X-correlation... INFO @ Sat, 11 Nov 2017 03:49:11: end of X-cor INFO @ Sat, 11 Nov 2017 03:49:11: #2 finished! INFO @ Sat, 11 Nov 2017 03:49:11: #2 predicted fragment length is 61 bps INFO @ Sat, 11 Nov 2017 03:49:11: #2 alternative fragment length(s) may be 61 bps INFO @ Sat, 11 Nov 2017 03:49:11: #2.2 Generate R script for model : SRX1977121.10_model.r WARNING @ Sat, 11 Nov 2017 03:49:11: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Nov 2017 03:49:11: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Sat, 11 Nov 2017 03:49:11: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Nov 2017 03:49:11: #3 Call peaks... INFO @ Sat, 11 Nov 2017 03:49:11: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Nov 2017 03:49:17: #2 number of paired peaks: 20932 INFO @ Sat, 11 Nov 2017 03:49:17: start model_add_line... INFO @ Sat, 11 Nov 2017 03:49:17: start X-correlation... INFO @ Sat, 11 Nov 2017 03:49:17: end of X-cor INFO @ Sat, 11 Nov 2017 03:49:17: #2 finished! INFO @ Sat, 11 Nov 2017 03:49:17: #2 predicted fragment length is 61 bps INFO @ Sat, 11 Nov 2017 03:49:17: #2 alternative fragment length(s) may be 61 bps INFO @ Sat, 11 Nov 2017 03:49:17: #2.2 Generate R script for model : SRX1977121.20_model.r WARNING @ Sat, 11 Nov 2017 03:49:17: #2 Since the d (61) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 11 Nov 2017 03:49:17: #2 You may need to consider one of the other alternative d(s): 61 WARNING @ Sat, 11 Nov 2017 03:49:17: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 11 Nov 2017 03:49:17: #3 Call peaks... INFO @ Sat, 11 Nov 2017 03:49:17: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 11 Nov 2017 03:51:28: #3 Call peaks for each chromosome... INFO @ Sat, 11 Nov 2017 03:51:31: #3 Call peaks for each chromosome... INFO @ Sat, 11 Nov 2017 03:51:34: #3 Call peaks for each chromosome... INFO @ Sat, 11 Nov 2017 03:52:51: #4 Write output xls file... SRX1977121.05_peaks.xls INFO @ Sat, 11 Nov 2017 03:52:51: #4 Write peak in narrowPeak format file... SRX1977121.05_peaks.narrowPeak INFO @ Sat, 11 Nov 2017 03:52:51: #4 Write summits bed file... SRX1977121.05_summits.bed INFO @ Sat, 11 Nov 2017 03:52:51: Done! pass1 - making usageList (162 chroms): 7 millis pass2 - checking and writing primary data (32444 records, 4 fields): 44 millis CompletedMACS2peakCalling INFO @ Sat, 11 Nov 2017 03:52:57: #4 Write output xls file... SRX1977121.10_peaks.xls INFO @ Sat, 11 Nov 2017 03:52:57: #4 Write peak in narrowPeak format file... SRX1977121.10_peaks.narrowPeak INFO @ Sat, 11 Nov 2017 03:52:57: #4 Write summits bed file... SRX1977121.10_summits.bed INFO @ Sat, 11 Nov 2017 03:52:57: Done! pass1 - making usageList (95 chroms): 2 millis pass2 - checking and writing primary data (6737 records, 4 fields): 14 millis CompletedMACS2peakCalling INFO @ Sat, 11 Nov 2017 03:53:00: #4 Write output xls file... SRX1977121.20_peaks.xls INFO @ Sat, 11 Nov 2017 03:53:00: #4 Write peak in narrowPeak format file... SRX1977121.20_peaks.narrowPeak INFO @ Sat, 11 Nov 2017 03:53:00: #4 Write summits bed file... SRX1977121.20_summits.bed INFO @ Sat, 11 Nov 2017 03:53:00: Done! pass1 - making usageList (58 chroms): 1 millis pass2 - checking and writing primary data (1665 records, 4 fields): 7 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。