Job ID = 2003498 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-05T03:06:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 83,550,102 reads read : 83,550,102 reads written : 83,550,102 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:47:05 83550102 reads; of these: 83550102 (100.00%) were unpaired; of these: 22564178 (27.01%) aligned 0 times 33051429 (39.56%) aligned exactly 1 time 27934495 (33.43%) aligned >1 times 72.99% overall alignment rate Time searching: 01:47:08 Overall time: 01:47:08 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 28 files... [bam_rmdupse_core] 7379251 / 60985924 = 0.1210 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 16:29:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 16:29:30: #1 read tag files... INFO @ Fri, 05 Jul 2019 16:29:30: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 16:29:31: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 16:29:31: #1 read tag files... INFO @ Fri, 05 Jul 2019 16:29:31: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 16:29:32: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 16:29:32: #1 read tag files... INFO @ Fri, 05 Jul 2019 16:29:32: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 16:29:39: 1000000 INFO @ Fri, 05 Jul 2019 16:29:41: 1000000 INFO @ Fri, 05 Jul 2019 16:29:41: 1000000 INFO @ Fri, 05 Jul 2019 16:29:47: 2000000 INFO @ Fri, 05 Jul 2019 16:29:49: 2000000 INFO @ Fri, 05 Jul 2019 16:29:51: 2000000 INFO @ Fri, 05 Jul 2019 16:29:55: 3000000 INFO @ Fri, 05 Jul 2019 16:29:57: 3000000 INFO @ Fri, 05 Jul 2019 16:30:01: 3000000 INFO @ Fri, 05 Jul 2019 16:30:03: 4000000 INFO @ Fri, 05 Jul 2019 16:30:05: 4000000 INFO @ Fri, 05 Jul 2019 16:30:10: 4000000 INFO @ Fri, 05 Jul 2019 16:30:12: 5000000 INFO @ Fri, 05 Jul 2019 16:30:14: 5000000 INFO @ Fri, 05 Jul 2019 16:30:20: 6000000 INFO @ Fri, 05 Jul 2019 16:30:20: 5000000 INFO @ Fri, 05 Jul 2019 16:30:22: 6000000 INFO @ Fri, 05 Jul 2019 16:30:28: 7000000 INFO @ Fri, 05 Jul 2019 16:30:30: 6000000 INFO @ Fri, 05 Jul 2019 16:30:30: 7000000 INFO @ Fri, 05 Jul 2019 16:30:36: 8000000 INFO @ Fri, 05 Jul 2019 16:30:38: 8000000 INFO @ Fri, 05 Jul 2019 16:30:39: 7000000 INFO @ Fri, 05 Jul 2019 16:30:44: 9000000 INFO @ Fri, 05 Jul 2019 16:30:46: 9000000 INFO @ Fri, 05 Jul 2019 16:30:49: 8000000 INFO @ Fri, 05 Jul 2019 16:30:53: 10000000 INFO @ Fri, 05 Jul 2019 16:30:54: 10000000 INFO @ Fri, 05 Jul 2019 16:30:58: 9000000 INFO @ Fri, 05 Jul 2019 16:31:01: 11000000 INFO @ Fri, 05 Jul 2019 16:31:02: 11000000 INFO @ Fri, 05 Jul 2019 16:31:08: 10000000 INFO @ Fri, 05 Jul 2019 16:31:09: 12000000 INFO @ Fri, 05 Jul 2019 16:31:11: 12000000 INFO @ Fri, 05 Jul 2019 16:31:17: 13000000 INFO @ Fri, 05 Jul 2019 16:31:17: 11000000 INFO @ Fri, 05 Jul 2019 16:31:19: 13000000 INFO @ Fri, 05 Jul 2019 16:31:25: 14000000 INFO @ Fri, 05 Jul 2019 16:31:26: 12000000 INFO @ Fri, 05 Jul 2019 16:31:27: 14000000 INFO @ Fri, 05 Jul 2019 16:31:33: 15000000 INFO @ Fri, 05 Jul 2019 16:31:35: 15000000 INFO @ Fri, 05 Jul 2019 16:31:36: 13000000 INFO @ Fri, 05 Jul 2019 16:31:41: 16000000 INFO @ Fri, 05 Jul 2019 16:31:43: 16000000 INFO @ Fri, 05 Jul 2019 16:31:45: 14000000 INFO @ Fri, 05 Jul 2019 16:31:49: 17000000 INFO @ Fri, 05 Jul 2019 16:31:51: 17000000 INFO @ Fri, 05 Jul 2019 16:31:54: 15000000 INFO @ Fri, 05 Jul 2019 16:31:57: 18000000 INFO @ Fri, 05 Jul 2019 16:31:59: 18000000 INFO @ Fri, 05 Jul 2019 16:32:04: 16000000 INFO @ Fri, 05 Jul 2019 16:32:05: 19000000 INFO @ Fri, 05 Jul 2019 16:32:07: 19000000 INFO @ Fri, 05 Jul 2019 16:32:13: 17000000 INFO @ Fri, 05 Jul 2019 16:32:14: 20000000 INFO @ Fri, 05 Jul 2019 16:32:16: 20000000 INFO @ Fri, 05 Jul 2019 16:32:22: 21000000 INFO @ Fri, 05 Jul 2019 16:32:23: 18000000 INFO @ Fri, 05 Jul 2019 16:32:24: 21000000 INFO @ Fri, 05 Jul 2019 16:32:30: 22000000 INFO @ Fri, 05 Jul 2019 16:32:32: 22000000 INFO @ Fri, 05 Jul 2019 16:32:32: 19000000 INFO @ Fri, 05 Jul 2019 16:32:38: 23000000 INFO @ Fri, 05 Jul 2019 16:32:40: 23000000 INFO @ Fri, 05 Jul 2019 16:32:42: 20000000 INFO @ Fri, 05 Jul 2019 16:32:46: 24000000 INFO @ Fri, 05 Jul 2019 16:32:48: 24000000 INFO @ Fri, 05 Jul 2019 16:32:52: 21000000 INFO @ Fri, 05 Jul 2019 16:32:54: 25000000 INFO @ Fri, 05 Jul 2019 16:32:56: 25000000 INFO @ Fri, 05 Jul 2019 16:33:01: 22000000 INFO @ Fri, 05 Jul 2019 16:33:02: 26000000 INFO @ Fri, 05 Jul 2019 16:33:04: 26000000 INFO @ Fri, 05 Jul 2019 16:33:10: 27000000 INFO @ Fri, 05 Jul 2019 16:33:12: 23000000 INFO @ Fri, 05 Jul 2019 16:33:12: 27000000 INFO @ Fri, 05 Jul 2019 16:33:19: 28000000 INFO @ Fri, 05 Jul 2019 16:33:21: 28000000 INFO @ Fri, 05 Jul 2019 16:33:22: 24000000 INFO @ Fri, 05 Jul 2019 16:33:27: 29000000 INFO @ Fri, 05 Jul 2019 16:33:29: 29000000 INFO @ Fri, 05 Jul 2019 16:33:32: 25000000 INFO @ Fri, 05 Jul 2019 16:33:35: 30000000 INFO @ Fri, 05 Jul 2019 16:33:37: 30000000 INFO @ Fri, 05 Jul 2019 16:33:42: 26000000 INFO @ Fri, 05 Jul 2019 16:33:43: 31000000 INFO @ Fri, 05 Jul 2019 16:33:45: 31000000 INFO @ Fri, 05 Jul 2019 16:33:51: 32000000 INFO @ Fri, 05 Jul 2019 16:33:52: 27000000 INFO @ Fri, 05 Jul 2019 16:33:53: 32000000 INFO @ Fri, 05 Jul 2019 16:33:59: 33000000 INFO @ Fri, 05 Jul 2019 16:34:02: 33000000 INFO @ Fri, 05 Jul 2019 16:34:03: 28000000 INFO @ Fri, 05 Jul 2019 16:34:07: 34000000 INFO @ Fri, 05 Jul 2019 16:34:10: 34000000 INFO @ Fri, 05 Jul 2019 16:34:13: 29000000 INFO @ Fri, 05 Jul 2019 16:34:15: 35000000 INFO @ Fri, 05 Jul 2019 16:34:18: 35000000 INFO @ Fri, 05 Jul 2019 16:34:23: 30000000 INFO @ Fri, 05 Jul 2019 16:34:23: 36000000 INFO @ Fri, 05 Jul 2019 16:34:26: 36000000 INFO @ Fri, 05 Jul 2019 16:34:31: 37000000 INFO @ Fri, 05 Jul 2019 16:34:33: 31000000 INFO @ Fri, 05 Jul 2019 16:34:34: 37000000 INFO @ Fri, 05 Jul 2019 16:34:39: 38000000 INFO @ Fri, 05 Jul 2019 16:34:43: 38000000 INFO @ Fri, 05 Jul 2019 16:34:43: 32000000 INFO @ Fri, 05 Jul 2019 16:34:48: 39000000 INFO @ Fri, 05 Jul 2019 16:34:51: 39000000 INFO @ Fri, 05 Jul 2019 16:34:53: 33000000 INFO @ Fri, 05 Jul 2019 16:34:56: 40000000 INFO @ Fri, 05 Jul 2019 16:34:59: 40000000 INFO @ Fri, 05 Jul 2019 16:35:03: 34000000 INFO @ Fri, 05 Jul 2019 16:35:04: 41000000 INFO @ Fri, 05 Jul 2019 16:35:07: 41000000 INFO @ Fri, 05 Jul 2019 16:35:12: 42000000 INFO @ Fri, 05 Jul 2019 16:35:13: 35000000 INFO @ Fri, 05 Jul 2019 16:35:15: 42000000 INFO @ Fri, 05 Jul 2019 16:35:20: 43000000 INFO @ Fri, 05 Jul 2019 16:35:23: 43000000 INFO @ Fri, 05 Jul 2019 16:35:23: 36000000 INFO @ Fri, 05 Jul 2019 16:35:28: 44000000 INFO @ Fri, 05 Jul 2019 16:35:31: 44000000 INFO @ Fri, 05 Jul 2019 16:35:34: 37000000 INFO @ Fri, 05 Jul 2019 16:35:36: 45000000 INFO @ Fri, 05 Jul 2019 16:35:39: 45000000 INFO @ Fri, 05 Jul 2019 16:35:43: 38000000 INFO @ Fri, 05 Jul 2019 16:35:44: 46000000 INFO @ Fri, 05 Jul 2019 16:35:47: 46000000 INFO @ Fri, 05 Jul 2019 16:35:52: 47000000 INFO @ Fri, 05 Jul 2019 16:35:54: 39000000 INFO @ Fri, 05 Jul 2019 16:35:55: 47000000 INFO @ Fri, 05 Jul 2019 16:36:00: 48000000 INFO @ Fri, 05 Jul 2019 16:36:03: 48000000 INFO @ Fri, 05 Jul 2019 16:36:04: 40000000 INFO @ Fri, 05 Jul 2019 16:36:08: 49000000 INFO @ Fri, 05 Jul 2019 16:36:12: 49000000 INFO @ Fri, 05 Jul 2019 16:36:14: 41000000 INFO @ Fri, 05 Jul 2019 16:36:16: 50000000 INFO @ Fri, 05 Jul 2019 16:36:20: 50000000 INFO @ Fri, 05 Jul 2019 16:36:23: 42000000 INFO @ Fri, 05 Jul 2019 16:36:25: 51000000 INFO @ Fri, 05 Jul 2019 16:36:28: 51000000 INFO @ Fri, 05 Jul 2019 16:36:33: 52000000 INFO @ Fri, 05 Jul 2019 16:36:33: 43000000 INFO @ Fri, 05 Jul 2019 16:36:36: 52000000 INFO @ Fri, 05 Jul 2019 16:36:41: 53000000 INFO @ Fri, 05 Jul 2019 16:36:43: 44000000 INFO @ Fri, 05 Jul 2019 16:36:44: 53000000 INFO @ Fri, 05 Jul 2019 16:36:46: #1 tag size is determined as 76 bps INFO @ Fri, 05 Jul 2019 16:36:46: #1 tag size = 76 INFO @ Fri, 05 Jul 2019 16:36:46: #1 total tags in treatment: 53606673 INFO @ Fri, 05 Jul 2019 16:36:46: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 16:36:46: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 16:36:48: #1 tags after filtering in treatment: 53606616 INFO @ Fri, 05 Jul 2019 16:36:48: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 16:36:48: #1 finished! INFO @ Fri, 05 Jul 2019 16:36:48: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 16:36:48: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 16:36:50: #1 tag size is determined as 76 bps INFO @ Fri, 05 Jul 2019 16:36:50: #1 tag size = 76 INFO @ Fri, 05 Jul 2019 16:36:50: #1 total tags in treatment: 53606673 INFO @ Fri, 05 Jul 2019 16:36:50: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 16:36:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 16:36:51: #1 tags after filtering in treatment: 53606616 INFO @ Fri, 05 Jul 2019 16:36:51: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 16:36:51: #1 finished! INFO @ Fri, 05 Jul 2019 16:36:51: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 16:36:51: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 16:36:54: 45000000 INFO @ Fri, 05 Jul 2019 16:36:55: #2 number of paired peaks: 36873 INFO @ Fri, 05 Jul 2019 16:36:55: start model_add_line... INFO @ Fri, 05 Jul 2019 16:36:56: start X-correlation... INFO @ Fri, 05 Jul 2019 16:36:56: end of X-cor INFO @ Fri, 05 Jul 2019 16:36:56: #2 finished! INFO @ Fri, 05 Jul 2019 16:36:56: #2 predicted fragment length is 78 bps INFO @ Fri, 05 Jul 2019 16:36:56: #2 alternative fragment length(s) may be 78 bps INFO @ Fri, 05 Jul 2019 16:36:56: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.05_model.r WARNING @ Fri, 05 Jul 2019 16:36:56: #2 Since the d (78) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 05 Jul 2019 16:36:56: #2 You may need to consider one of the other alternative d(s): 78 WARNING @ Fri, 05 Jul 2019 16:36:56: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 05 Jul 2019 16:36:56: #3 Call peaks... INFO @ Fri, 05 Jul 2019 16:36:56: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 16:36:58: #2 number of paired peaks: 36873 INFO @ Fri, 05 Jul 2019 16:36:58: start model_add_line... INFO @ Fri, 05 Jul 2019 16:36:59: start X-correlation... INFO @ Fri, 05 Jul 2019 16:36:59: end of X-cor INFO @ Fri, 05 Jul 2019 16:36:59: #2 finished! INFO @ Fri, 05 Jul 2019 16:36:59: #2 predicted fragment length is 78 bps INFO @ Fri, 05 Jul 2019 16:36:59: #2 alternative fragment length(s) may be 78 bps INFO @ Fri, 05 Jul 2019 16:36:59: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.20_model.r WARNING @ Fri, 05 Jul 2019 16:36:59: #2 Since the d (78) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 05 Jul 2019 16:36:59: #2 You may need to consider one of the other alternative d(s): 78 WARNING @ Fri, 05 Jul 2019 16:36:59: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 05 Jul 2019 16:36:59: #3 Call peaks... INFO @ Fri, 05 Jul 2019 16:36:59: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 16:37:04: 46000000 INFO @ Fri, 05 Jul 2019 16:37:14: 47000000 INFO @ Fri, 05 Jul 2019 16:37:23: 48000000 INFO @ Fri, 05 Jul 2019 16:37:33: 49000000 INFO @ Fri, 05 Jul 2019 16:37:44: 50000000 INFO @ Fri, 05 Jul 2019 16:37:54: 51000000 INFO @ Fri, 05 Jul 2019 16:38:04: 52000000 INFO @ Fri, 05 Jul 2019 16:38:14: 53000000 INFO @ Fri, 05 Jul 2019 16:38:20: #1 tag size is determined as 76 bps INFO @ Fri, 05 Jul 2019 16:38:20: #1 tag size = 76 INFO @ Fri, 05 Jul 2019 16:38:20: #1 total tags in treatment: 53606673 INFO @ Fri, 05 Jul 2019 16:38:20: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 16:38:20: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 16:38:22: #1 tags after filtering in treatment: 53606616 INFO @ Fri, 05 Jul 2019 16:38:22: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 16:38:22: #1 finished! INFO @ Fri, 05 Jul 2019 16:38:22: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 16:38:22: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 16:38:29: #2 number of paired peaks: 36873 INFO @ Fri, 05 Jul 2019 16:38:29: start model_add_line... INFO @ Fri, 05 Jul 2019 16:38:30: start X-correlation... INFO @ Fri, 05 Jul 2019 16:38:30: end of X-cor INFO @ Fri, 05 Jul 2019 16:38:30: #2 finished! INFO @ Fri, 05 Jul 2019 16:38:30: #2 predicted fragment length is 78 bps INFO @ Fri, 05 Jul 2019 16:38:30: #2 alternative fragment length(s) may be 78 bps INFO @ Fri, 05 Jul 2019 16:38:30: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.10_model.r WARNING @ Fri, 05 Jul 2019 16:38:30: #2 Since the d (78) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 05 Jul 2019 16:38:30: #2 You may need to consider one of the other alternative d(s): 78 WARNING @ Fri, 05 Jul 2019 16:38:30: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 05 Jul 2019 16:38:30: #3 Call peaks... INFO @ Fri, 05 Jul 2019 16:38:30: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 16:39:46: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 16:39:48: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 16:41:12: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.05_peaks.xls INFO @ Fri, 05 Jul 2019 16:41:12: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 16:41:12: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.05_summits.bed INFO @ Fri, 05 Jul 2019 16:41:12: Done! pass1 - making usageList (158 chroms): 4 millis pass2 - checking and writing primary data (19814 records, 4 fields): 33 millis INFO @ Fri, 05 Jul 2019 16:41:13: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.20_peaks.xls INFO @ Fri, 05 Jul 2019 16:41:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 16:41:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.20_summits.bed INFO @ Fri, 05 Jul 2019 16:41:13: Done! pass1 - making usageList (67 chroms): 1 millis pass2 - checking and writing primary data (1429 records, 4 fields): 11 millis CompletedMACS2peakCalling CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 16:41:27: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 16:42:59: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.10_peaks.xls INFO @ Fri, 05 Jul 2019 16:42:59: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 16:42:59: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/SRX189938/SRX189938.10_summits.bed INFO @ Fri, 05 Jul 2019 16:42:59: Done! pass1 - making usageList (115 chroms): 1 millis pass2 - checking and writing primary data (5030 records, 4 fields): 15 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。