Job ID = 2640384 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-08-24T07:14:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T07:14:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 55,474,205 reads read : 55,474,205 reads written : 55,474,205 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:31:37 55474205 reads; of these: 55474205 (100.00%) were unpaired; of these: 181019 (0.33%) aligned 0 times 50343464 (90.75%) aligned exactly 1 time 4949722 (8.92%) aligned >1 times 99.67% overall alignment rate Time searching: 00:31:40 Overall time: 00:31:41 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 24 files... [bam_rmdupse_core] 993 / 55293186 = 0.0000 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Sat, 24 Aug 2019 17:06:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 17:06:42: #1 read tag files... INFO @ Sat, 24 Aug 2019 17:06:42: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 17:06:50: 1000000 INFO @ Sat, 24 Aug 2019 17:06:57: 2000000 INFO @ Sat, 24 Aug 2019 17:07:05: 3000000 INFO @ Sat, 24 Aug 2019 17:07:11: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 17:07:11: #1 read tag files... INFO @ Sat, 24 Aug 2019 17:07:11: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 17:07:12: 4000000 INFO @ Sat, 24 Aug 2019 17:07:19: 1000000 INFO @ Sat, 24 Aug 2019 17:07:20: 5000000 INFO @ Sat, 24 Aug 2019 17:07:27: 2000000 INFO @ Sat, 24 Aug 2019 17:07:28: 6000000 INFO @ Sat, 24 Aug 2019 17:07:35: 3000000 INFO @ Sat, 24 Aug 2019 17:07:36: 7000000 BedGraph に変換中... INFO @ Sat, 24 Aug 2019 17:07:41: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 17:07:41: #1 read tag files... INFO @ Sat, 24 Aug 2019 17:07:41: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 17:07:43: 4000000 INFO @ Sat, 24 Aug 2019 17:07:43: 8000000 INFO @ Sat, 24 Aug 2019 17:07:49: 1000000 INFO @ Sat, 24 Aug 2019 17:07:51: 5000000 INFO @ Sat, 24 Aug 2019 17:07:51: 9000000 INFO @ Sat, 24 Aug 2019 17:07:56: 2000000 INFO @ Sat, 24 Aug 2019 17:07:58: 6000000 INFO @ Sat, 24 Aug 2019 17:07:58: 10000000 INFO @ Sat, 24 Aug 2019 17:08:04: 3000000 INFO @ Sat, 24 Aug 2019 17:08:06: 11000000 INFO @ Sat, 24 Aug 2019 17:08:06: 7000000 INFO @ Sat, 24 Aug 2019 17:08:12: 4000000 INFO @ Sat, 24 Aug 2019 17:08:14: 12000000 INFO @ Sat, 24 Aug 2019 17:08:14: 8000000 INFO @ Sat, 24 Aug 2019 17:08:20: 5000000 INFO @ Sat, 24 Aug 2019 17:08:22: 13000000 INFO @ Sat, 24 Aug 2019 17:08:22: 9000000 INFO @ Sat, 24 Aug 2019 17:08:28: 6000000 INFO @ Sat, 24 Aug 2019 17:08:29: 14000000 INFO @ Sat, 24 Aug 2019 17:08:30: 10000000 INFO @ Sat, 24 Aug 2019 17:08:36: 7000000 INFO @ Sat, 24 Aug 2019 17:08:37: 15000000 INFO @ Sat, 24 Aug 2019 17:08:38: 11000000 INFO @ Sat, 24 Aug 2019 17:08:44: 8000000 INFO @ Sat, 24 Aug 2019 17:08:45: 16000000 INFO @ Sat, 24 Aug 2019 17:08:46: 12000000 INFO @ Sat, 24 Aug 2019 17:08:52: 9000000 INFO @ Sat, 24 Aug 2019 17:08:52: 17000000 INFO @ Sat, 24 Aug 2019 17:08:54: 13000000 INFO @ Sat, 24 Aug 2019 17:09:00: 10000000 INFO @ Sat, 24 Aug 2019 17:09:00: 18000000 INFO @ Sat, 24 Aug 2019 17:09:02: 14000000 INFO @ Sat, 24 Aug 2019 17:09:08: 11000000 INFO @ Sat, 24 Aug 2019 17:09:09: 19000000 INFO @ Sat, 24 Aug 2019 17:09:11: 15000000 INFO @ Sat, 24 Aug 2019 17:09:17: 12000000 INFO @ Sat, 24 Aug 2019 17:09:18: 20000000 INFO @ Sat, 24 Aug 2019 17:09:20: 16000000 INFO @ Sat, 24 Aug 2019 17:09:26: 13000000 INFO @ Sat, 24 Aug 2019 17:09:26: 21000000 INFO @ Sat, 24 Aug 2019 17:09:29: 17000000 INFO @ Sat, 24 Aug 2019 17:09:34: 14000000 INFO @ Sat, 24 Aug 2019 17:09:35: 22000000 INFO @ Sat, 24 Aug 2019 17:09:37: 18000000 INFO @ Sat, 24 Aug 2019 17:09:43: 15000000 INFO @ Sat, 24 Aug 2019 17:09:43: 23000000 INFO @ Sat, 24 Aug 2019 17:09:46: 19000000 INFO @ Sat, 24 Aug 2019 17:09:51: 16000000 INFO @ Sat, 24 Aug 2019 17:09:51: 24000000 INFO @ Sat, 24 Aug 2019 17:09:55: 20000000 INFO @ Sat, 24 Aug 2019 17:09:59: 17000000 INFO @ Sat, 24 Aug 2019 17:10:00: 25000000 INFO @ Sat, 24 Aug 2019 17:10:03: 21000000 INFO @ Sat, 24 Aug 2019 17:10:07: 18000000 INFO @ Sat, 24 Aug 2019 17:10:08: 26000000 INFO @ Sat, 24 Aug 2019 17:10:11: 22000000 INFO @ Sat, 24 Aug 2019 17:10:16: 19000000 INFO @ Sat, 24 Aug 2019 17:10:17: 27000000 INFO @ Sat, 24 Aug 2019 17:10:19: 23000000 INFO @ Sat, 24 Aug 2019 17:10:25: 20000000 INFO @ Sat, 24 Aug 2019 17:10:25: 28000000 INFO @ Sat, 24 Aug 2019 17:10:28: 24000000 INFO @ Sat, 24 Aug 2019 17:10:33: 21000000 INFO @ Sat, 24 Aug 2019 17:10:33: 29000000 INFO @ Sat, 24 Aug 2019 17:10:36: 25000000 INFO @ Sat, 24 Aug 2019 17:10:41: 22000000 INFO @ Sat, 24 Aug 2019 17:10:42: 30000000 INFO @ Sat, 24 Aug 2019 17:10:44: 26000000 INFO @ Sat, 24 Aug 2019 17:10:48: 23000000 INFO @ Sat, 24 Aug 2019 17:10:49: 31000000 INFO @ Sat, 24 Aug 2019 17:10:52: 27000000 INFO @ Sat, 24 Aug 2019 17:10:56: 24000000 INFO @ Sat, 24 Aug 2019 17:10:57: 32000000 INFO @ Sat, 24 Aug 2019 17:11:00: 28000000 INFO @ Sat, 24 Aug 2019 17:11:04: 25000000 INFO @ Sat, 24 Aug 2019 17:11:05: 33000000 INFO @ Sat, 24 Aug 2019 17:11:08: 29000000 INFO @ Sat, 24 Aug 2019 17:11:12: 26000000 INFO @ Sat, 24 Aug 2019 17:11:12: 34000000 INFO @ Sat, 24 Aug 2019 17:11:17: 30000000 INFO @ Sat, 24 Aug 2019 17:11:20: 27000000 INFO @ Sat, 24 Aug 2019 17:11:20: 35000000 INFO @ Sat, 24 Aug 2019 17:11:25: 31000000 INFO @ Sat, 24 Aug 2019 17:11:28: 28000000 INFO @ Sat, 24 Aug 2019 17:11:28: 36000000 INFO @ Sat, 24 Aug 2019 17:11:33: 32000000 INFO @ Sat, 24 Aug 2019 17:11:36: 29000000 INFO @ Sat, 24 Aug 2019 17:11:36: 37000000 INFO @ Sat, 24 Aug 2019 17:11:41: 33000000 INFO @ Sat, 24 Aug 2019 17:11:43: 38000000 INFO @ Sat, 24 Aug 2019 17:11:44: 30000000 INFO @ Sat, 24 Aug 2019 17:11:49: 34000000 INFO @ Sat, 24 Aug 2019 17:11:51: 39000000 INFO @ Sat, 24 Aug 2019 17:11:52: 31000000 INFO @ Sat, 24 Aug 2019 17:11:56: 35000000 INFO @ Sat, 24 Aug 2019 17:11:58: 40000000 INFO @ Sat, 24 Aug 2019 17:11:59: 32000000 INFO @ Sat, 24 Aug 2019 17:12:04: 36000000 INFO @ Sat, 24 Aug 2019 17:12:06: 41000000 INFO @ Sat, 24 Aug 2019 17:12:07: 33000000 INFO @ Sat, 24 Aug 2019 17:12:12: 37000000 INFO @ Sat, 24 Aug 2019 17:12:14: 42000000 INFO @ Sat, 24 Aug 2019 17:12:15: 34000000 INFO @ Sat, 24 Aug 2019 17:12:20: 38000000 INFO @ Sat, 24 Aug 2019 17:12:21: 43000000 INFO @ Sat, 24 Aug 2019 17:12:22: 35000000 INFO @ Sat, 24 Aug 2019 17:12:28: 39000000 INFO @ Sat, 24 Aug 2019 17:12:29: 44000000 INFO @ Sat, 24 Aug 2019 17:12:29: 36000000 INFO @ Sat, 24 Aug 2019 17:12:35: 40000000 INFO @ Sat, 24 Aug 2019 17:12:37: 45000000 INFO @ Sat, 24 Aug 2019 17:12:37: 37000000 INFO @ Sat, 24 Aug 2019 17:12:43: 41000000 INFO @ Sat, 24 Aug 2019 17:12:44: 38000000 INFO @ Sat, 24 Aug 2019 17:12:44: 46000000 INFO @ Sat, 24 Aug 2019 17:12:51: 42000000 INFO @ Sat, 24 Aug 2019 17:12:51: 39000000 INFO @ Sat, 24 Aug 2019 17:12:52: 47000000 INFO @ Sat, 24 Aug 2019 17:12:58: 43000000 INFO @ Sat, 24 Aug 2019 17:12:59: 40000000 INFO @ Sat, 24 Aug 2019 17:12:59: 48000000 INFO @ Sat, 24 Aug 2019 17:13:06: 44000000 INFO @ Sat, 24 Aug 2019 17:13:06: 41000000 INFO @ Sat, 24 Aug 2019 17:13:07: 49000000 INFO @ Sat, 24 Aug 2019 17:13:14: 45000000 INFO @ Sat, 24 Aug 2019 17:13:14: 42000000 INFO @ Sat, 24 Aug 2019 17:13:14: 50000000 INFO @ Sat, 24 Aug 2019 17:13:21: 43000000 INFO @ Sat, 24 Aug 2019 17:13:21: 46000000 INFO @ Sat, 24 Aug 2019 17:13:22: 51000000 INFO @ Sat, 24 Aug 2019 17:13:29: 44000000 INFO @ Sat, 24 Aug 2019 17:13:29: 47000000 INFO @ Sat, 24 Aug 2019 17:13:29: 52000000 INFO @ Sat, 24 Aug 2019 17:13:36: 45000000 INFO @ Sat, 24 Aug 2019 17:13:37: 53000000 INFO @ Sat, 24 Aug 2019 17:13:37: 48000000 INFO @ Sat, 24 Aug 2019 17:13:44: 46000000 INFO @ Sat, 24 Aug 2019 17:13:45: 54000000 INFO @ Sat, 24 Aug 2019 17:13:45: 49000000 INFO @ Sat, 24 Aug 2019 17:13:52: 47000000 INFO @ Sat, 24 Aug 2019 17:13:52: 55000000 INFO @ Sat, 24 Aug 2019 17:13:53: 50000000 INFO @ Sat, 24 Aug 2019 17:13:55: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 17:13:55: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 17:13:55: #1 total tags in treatment: 55292193 INFO @ Sat, 24 Aug 2019 17:13:55: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 17:13:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 17:13:56: #1 tags after filtering in treatment: 55292094 INFO @ Sat, 24 Aug 2019 17:13:56: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 17:13:56: #1 finished! INFO @ Sat, 24 Aug 2019 17:13:56: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 17:13:56: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 17:13:59: 48000000 INFO @ Sat, 24 Aug 2019 17:14:00: 51000000 INFO @ Sat, 24 Aug 2019 17:14:02: #2 number of paired peaks: 502 WARNING @ Sat, 24 Aug 2019 17:14:02: Fewer paired peaks (502) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 502 pairs to build model! INFO @ Sat, 24 Aug 2019 17:14:02: start model_add_line... INFO @ Sat, 24 Aug 2019 17:14:03: start X-correlation... INFO @ Sat, 24 Aug 2019 17:14:03: end of X-cor INFO @ Sat, 24 Aug 2019 17:14:03: #2 finished! INFO @ Sat, 24 Aug 2019 17:14:03: #2 predicted fragment length is 50 bps INFO @ Sat, 24 Aug 2019 17:14:03: #2 alternative fragment length(s) may be 50,525,542,567 bps INFO @ Sat, 24 Aug 2019 17:14:03: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.05_model.r WARNING @ Sat, 24 Aug 2019 17:14:03: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 24 Aug 2019 17:14:03: #2 You may need to consider one of the other alternative d(s): 50,525,542,567 WARNING @ Sat, 24 Aug 2019 17:14:03: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 24 Aug 2019 17:14:03: #3 Call peaks... INFO @ Sat, 24 Aug 2019 17:14:03: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 17:14:07: 49000000 INFO @ Sat, 24 Aug 2019 17:14:08: 52000000 INFO @ Sat, 24 Aug 2019 17:14:14: 50000000 INFO @ Sat, 24 Aug 2019 17:14:15: 53000000 INFO @ Sat, 24 Aug 2019 17:14:21: 51000000 INFO @ Sat, 24 Aug 2019 17:14:24: 54000000 INFO @ Sat, 24 Aug 2019 17:14:29: 52000000 INFO @ Sat, 24 Aug 2019 17:14:32: 55000000 INFO @ Sat, 24 Aug 2019 17:14:36: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 17:14:36: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 17:14:36: #1 total tags in treatment: 55292193 INFO @ Sat, 24 Aug 2019 17:14:36: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 17:14:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 17:14:37: 53000000 INFO @ Sat, 24 Aug 2019 17:14:37: #1 tags after filtering in treatment: 55292094 INFO @ Sat, 24 Aug 2019 17:14:37: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 17:14:37: #1 finished! INFO @ Sat, 24 Aug 2019 17:14:37: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 17:14:37: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 17:14:43: #2 number of paired peaks: 502 WARNING @ Sat, 24 Aug 2019 17:14:43: Fewer paired peaks (502) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 502 pairs to build model! INFO @ Sat, 24 Aug 2019 17:14:43: start model_add_line... INFO @ Sat, 24 Aug 2019 17:14:44: start X-correlation... INFO @ Sat, 24 Aug 2019 17:14:44: end of X-cor INFO @ Sat, 24 Aug 2019 17:14:44: #2 finished! INFO @ Sat, 24 Aug 2019 17:14:44: #2 predicted fragment length is 50 bps INFO @ Sat, 24 Aug 2019 17:14:44: #2 alternative fragment length(s) may be 50,525,542,567 bps INFO @ Sat, 24 Aug 2019 17:14:44: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.10_model.r WARNING @ Sat, 24 Aug 2019 17:14:44: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 24 Aug 2019 17:14:44: #2 You may need to consider one of the other alternative d(s): 50,525,542,567 WARNING @ Sat, 24 Aug 2019 17:14:44: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 24 Aug 2019 17:14:44: #3 Call peaks... INFO @ Sat, 24 Aug 2019 17:14:44: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 17:14:44: 54000000 INFO @ Sat, 24 Aug 2019 17:14:52: 55000000 INFO @ Sat, 24 Aug 2019 17:14:55: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 17:14:55: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 17:14:55: #1 total tags in treatment: 55292193 INFO @ Sat, 24 Aug 2019 17:14:55: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 17:14:55: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 17:14:56: #1 tags after filtering in treatment: 55292094 INFO @ Sat, 24 Aug 2019 17:14:56: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 17:14:56: #1 finished! INFO @ Sat, 24 Aug 2019 17:14:56: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 17:14:56: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 17:15:02: #2 number of paired peaks: 502 WARNING @ Sat, 24 Aug 2019 17:15:02: Fewer paired peaks (502) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 502 pairs to build model! INFO @ Sat, 24 Aug 2019 17:15:02: start model_add_line... INFO @ Sat, 24 Aug 2019 17:15:02: start X-correlation... INFO @ Sat, 24 Aug 2019 17:15:02: end of X-cor INFO @ Sat, 24 Aug 2019 17:15:02: #2 finished! INFO @ Sat, 24 Aug 2019 17:15:02: #2 predicted fragment length is 50 bps INFO @ Sat, 24 Aug 2019 17:15:02: #2 alternative fragment length(s) may be 50,525,542,567 bps INFO @ Sat, 24 Aug 2019 17:15:02: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.20_model.r WARNING @ Sat, 24 Aug 2019 17:15:02: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 24 Aug 2019 17:15:02: #2 You may need to consider one of the other alternative d(s): 50,525,542,567 WARNING @ Sat, 24 Aug 2019 17:15:02: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 24 Aug 2019 17:15:02: #3 Call peaks... INFO @ Sat, 24 Aug 2019 17:15:02: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 17:16:53: #3 Call peaks for each chromosome... INFO @ Sat, 24 Aug 2019 17:17:36: #3 Call peaks for each chromosome... INFO @ Sat, 24 Aug 2019 17:17:51: #3 Call peaks for each chromosome... INFO @ Sat, 24 Aug 2019 17:18:18: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.05_peaks.xls INFO @ Sat, 24 Aug 2019 17:18:18: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.05_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 17:18:18: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.05_summits.bed INFO @ Sat, 24 Aug 2019 17:18:18: Done! pass1 - making usageList (24 chroms): 2 millis pass2 - checking and writing primary data (786 records, 4 fields): 7 millis CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 17:19:02: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.10_peaks.xls INFO @ Sat, 24 Aug 2019 17:19:02: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.10_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 17:19:02: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.10_summits.bed INFO @ Sat, 24 Aug 2019 17:19:02: Done! pass1 - making usageList (22 chroms): 2 millis pass2 - checking and writing primary data (376 records, 4 fields): 5 millis CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 17:19:20: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.20_peaks.xls INFO @ Sat, 24 Aug 2019 17:19:20: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.20_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 17:19:20: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2901256/ERX2901256.20_summits.bed INFO @ Sat, 24 Aug 2019 17:19:20: Done! pass1 - making usageList (17 chroms): 1 millis pass2 - checking and writing primary data (118 records, 4 fields): 3 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。