Job ID = 2640399 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-08-24T07:00:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T07:06:14 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-08-24T07:14:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 50,955,543 reads read : 50,955,543 reads written : 50,955,543 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 00:21:18 50955543 reads; of these: 50955543 (100.00%) were unpaired; of these: 170067 (0.33%) aligned 0 times 46087737 (90.45%) aligned exactly 1 time 4697739 (9.22%) aligned >1 times 99.67% overall alignment rate Time searching: 00:21:21 Overall time: 00:21:21 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 24 files... [bam_rmdupse_core] 1088 / 50785476 = 0.0000 in library ' ' BAM に変換しました。 Bed ファイルを作成中... INFO @ Sat, 24 Aug 2019 16:50:30: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 16:50:30: #1 read tag files... INFO @ Sat, 24 Aug 2019 16:50:30: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 16:50:34: 1000000 INFO @ Sat, 24 Aug 2019 16:50:39: 2000000 INFO @ Sat, 24 Aug 2019 16:50:42: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 16:50:42: #1 read tag files... INFO @ Sat, 24 Aug 2019 16:50:42: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 16:50:43: 3000000 INFO @ Sat, 24 Aug 2019 16:50:47: 1000000 INFO @ Sat, 24 Aug 2019 16:50:48: 4000000 INFO @ Sat, 24 Aug 2019 16:50:52: 2000000 INFO @ Sat, 24 Aug 2019 16:50:53: 5000000 INFO @ Sat, 24 Aug 2019 16:50:56: 3000000 INFO @ Sat, 24 Aug 2019 16:50:58: 6000000 BedGraph に変換中... INFO @ Sat, 24 Aug 2019 16:51:00: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Sat, 24 Aug 2019 16:51:00: #1 read tag files... INFO @ Sat, 24 Aug 2019 16:51:00: #1 read treatment tags... INFO @ Sat, 24 Aug 2019 16:51:01: 4000000 INFO @ Sat, 24 Aug 2019 16:51:03: 7000000 INFO @ Sat, 24 Aug 2019 16:51:05: 1000000 INFO @ Sat, 24 Aug 2019 16:51:06: 5000000 INFO @ Sat, 24 Aug 2019 16:51:07: 8000000 INFO @ Sat, 24 Aug 2019 16:51:10: 2000000 INFO @ Sat, 24 Aug 2019 16:51:10: 6000000 INFO @ Sat, 24 Aug 2019 16:51:13: 9000000 INFO @ Sat, 24 Aug 2019 16:51:15: 7000000 INFO @ Sat, 24 Aug 2019 16:51:15: 3000000 INFO @ Sat, 24 Aug 2019 16:51:17: 10000000 INFO @ Sat, 24 Aug 2019 16:51:19: 8000000 INFO @ Sat, 24 Aug 2019 16:51:20: 4000000 INFO @ Sat, 24 Aug 2019 16:51:22: 11000000 INFO @ Sat, 24 Aug 2019 16:51:24: 9000000 INFO @ Sat, 24 Aug 2019 16:51:25: 5000000 INFO @ Sat, 24 Aug 2019 16:51:26: 12000000 INFO @ Sat, 24 Aug 2019 16:51:28: 10000000 INFO @ Sat, 24 Aug 2019 16:51:31: 6000000 INFO @ Sat, 24 Aug 2019 16:51:31: 13000000 INFO @ Sat, 24 Aug 2019 16:51:33: 11000000 INFO @ Sat, 24 Aug 2019 16:51:36: 14000000 INFO @ Sat, 24 Aug 2019 16:51:36: 7000000 INFO @ Sat, 24 Aug 2019 16:51:37: 12000000 INFO @ Sat, 24 Aug 2019 16:51:40: 15000000 INFO @ Sat, 24 Aug 2019 16:51:41: 8000000 INFO @ Sat, 24 Aug 2019 16:51:42: 13000000 INFO @ Sat, 24 Aug 2019 16:51:45: 16000000 INFO @ Sat, 24 Aug 2019 16:51:46: 9000000 INFO @ Sat, 24 Aug 2019 16:51:46: 14000000 INFO @ Sat, 24 Aug 2019 16:51:50: 17000000 INFO @ Sat, 24 Aug 2019 16:51:51: 15000000 INFO @ Sat, 24 Aug 2019 16:51:51: 10000000 INFO @ Sat, 24 Aug 2019 16:51:54: 18000000 INFO @ Sat, 24 Aug 2019 16:51:55: 16000000 INFO @ Sat, 24 Aug 2019 16:51:57: 11000000 INFO @ Sat, 24 Aug 2019 16:51:59: 19000000 INFO @ Sat, 24 Aug 2019 16:52:00: 17000000 INFO @ Sat, 24 Aug 2019 16:52:02: 12000000 INFO @ Sat, 24 Aug 2019 16:52:04: 20000000 INFO @ Sat, 24 Aug 2019 16:52:04: 18000000 INFO @ Sat, 24 Aug 2019 16:52:07: 13000000 INFO @ Sat, 24 Aug 2019 16:52:09: 21000000 INFO @ Sat, 24 Aug 2019 16:52:09: 19000000 INFO @ Sat, 24 Aug 2019 16:52:12: 14000000 INFO @ Sat, 24 Aug 2019 16:52:13: 22000000 INFO @ Sat, 24 Aug 2019 16:52:13: 20000000 INFO @ Sat, 24 Aug 2019 16:52:17: 15000000 INFO @ Sat, 24 Aug 2019 16:52:18: 23000000 INFO @ Sat, 24 Aug 2019 16:52:18: 21000000 INFO @ Sat, 24 Aug 2019 16:52:22: 24000000 INFO @ Sat, 24 Aug 2019 16:52:22: 16000000 INFO @ Sat, 24 Aug 2019 16:52:22: 22000000 INFO @ Sat, 24 Aug 2019 16:52:27: 25000000 INFO @ Sat, 24 Aug 2019 16:52:27: 23000000 INFO @ Sat, 24 Aug 2019 16:52:27: 17000000 INFO @ Sat, 24 Aug 2019 16:52:31: 26000000 INFO @ Sat, 24 Aug 2019 16:52:32: 24000000 INFO @ Sat, 24 Aug 2019 16:52:33: 18000000 INFO @ Sat, 24 Aug 2019 16:52:36: 27000000 INFO @ Sat, 24 Aug 2019 16:52:36: 25000000 INFO @ Sat, 24 Aug 2019 16:52:38: 19000000 INFO @ Sat, 24 Aug 2019 16:52:41: 26000000 INFO @ Sat, 24 Aug 2019 16:52:41: 28000000 INFO @ Sat, 24 Aug 2019 16:52:43: 20000000 INFO @ Sat, 24 Aug 2019 16:52:45: 27000000 INFO @ Sat, 24 Aug 2019 16:52:45: 29000000 INFO @ Sat, 24 Aug 2019 16:52:48: 21000000 INFO @ Sat, 24 Aug 2019 16:52:50: 28000000 INFO @ Sat, 24 Aug 2019 16:52:50: 30000000 INFO @ Sat, 24 Aug 2019 16:52:53: 22000000 INFO @ Sat, 24 Aug 2019 16:52:54: 29000000 INFO @ Sat, 24 Aug 2019 16:52:55: 31000000 INFO @ Sat, 24 Aug 2019 16:52:58: 23000000 INFO @ Sat, 24 Aug 2019 16:52:59: 30000000 INFO @ Sat, 24 Aug 2019 16:52:59: 32000000 INFO @ Sat, 24 Aug 2019 16:53:03: 31000000 INFO @ Sat, 24 Aug 2019 16:53:03: 24000000 INFO @ Sat, 24 Aug 2019 16:53:04: 33000000 INFO @ Sat, 24 Aug 2019 16:53:08: 32000000 INFO @ Sat, 24 Aug 2019 16:53:08: 25000000 INFO @ Sat, 24 Aug 2019 16:53:09: 34000000 INFO @ Sat, 24 Aug 2019 16:53:12: 33000000 INFO @ Sat, 24 Aug 2019 16:53:13: 35000000 INFO @ Sat, 24 Aug 2019 16:53:13: 26000000 INFO @ Sat, 24 Aug 2019 16:53:17: 34000000 INFO @ Sat, 24 Aug 2019 16:53:18: 36000000 INFO @ Sat, 24 Aug 2019 16:53:19: 27000000 INFO @ Sat, 24 Aug 2019 16:53:21: 35000000 INFO @ Sat, 24 Aug 2019 16:53:23: 37000000 INFO @ Sat, 24 Aug 2019 16:53:24: 28000000 INFO @ Sat, 24 Aug 2019 16:53:26: 36000000 INFO @ Sat, 24 Aug 2019 16:53:28: 38000000 INFO @ Sat, 24 Aug 2019 16:53:28: 29000000 INFO @ Sat, 24 Aug 2019 16:53:30: 37000000 INFO @ Sat, 24 Aug 2019 16:53:32: 39000000 INFO @ Sat, 24 Aug 2019 16:53:34: 30000000 INFO @ Sat, 24 Aug 2019 16:53:35: 38000000 INFO @ Sat, 24 Aug 2019 16:53:37: 40000000 INFO @ Sat, 24 Aug 2019 16:53:39: 31000000 INFO @ Sat, 24 Aug 2019 16:53:39: 39000000 INFO @ Sat, 24 Aug 2019 16:53:41: 41000000 INFO @ Sat, 24 Aug 2019 16:53:44: 32000000 INFO @ Sat, 24 Aug 2019 16:53:44: 40000000 INFO @ Sat, 24 Aug 2019 16:53:46: 42000000 INFO @ Sat, 24 Aug 2019 16:53:48: 41000000 INFO @ Sat, 24 Aug 2019 16:53:49: 33000000 INFO @ Sat, 24 Aug 2019 16:53:51: 43000000 INFO @ Sat, 24 Aug 2019 16:53:53: 42000000 INFO @ Sat, 24 Aug 2019 16:53:54: 34000000 INFO @ Sat, 24 Aug 2019 16:53:55: 44000000 INFO @ Sat, 24 Aug 2019 16:53:57: 43000000 INFO @ Sat, 24 Aug 2019 16:53:59: 35000000 INFO @ Sat, 24 Aug 2019 16:54:00: 45000000 INFO @ Sat, 24 Aug 2019 16:54:02: 44000000 INFO @ Sat, 24 Aug 2019 16:54:04: 36000000 INFO @ Sat, 24 Aug 2019 16:54:04: 46000000 INFO @ Sat, 24 Aug 2019 16:54:06: 45000000 INFO @ Sat, 24 Aug 2019 16:54:09: 37000000 INFO @ Sat, 24 Aug 2019 16:54:09: 47000000 INFO @ Sat, 24 Aug 2019 16:54:11: 46000000 INFO @ Sat, 24 Aug 2019 16:54:14: 48000000 INFO @ Sat, 24 Aug 2019 16:54:14: 38000000 INFO @ Sat, 24 Aug 2019 16:54:15: 47000000 INFO @ Sat, 24 Aug 2019 16:54:19: 49000000 INFO @ Sat, 24 Aug 2019 16:54:19: 39000000 INFO @ Sat, 24 Aug 2019 16:54:20: 48000000 INFO @ Sat, 24 Aug 2019 16:54:23: 50000000 INFO @ Sat, 24 Aug 2019 16:54:24: 49000000 INFO @ Sat, 24 Aug 2019 16:54:24: 40000000 INFO @ Sat, 24 Aug 2019 16:54:27: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 16:54:27: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 16:54:27: #1 total tags in treatment: 50784388 INFO @ Sat, 24 Aug 2019 16:54:27: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 16:54:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 16:54:28: #1 tags after filtering in treatment: 50784264 INFO @ Sat, 24 Aug 2019 16:54:28: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 16:54:28: #1 finished! INFO @ Sat, 24 Aug 2019 16:54:28: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 16:54:28: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 16:54:29: 50000000 INFO @ Sat, 24 Aug 2019 16:54:30: 41000000 INFO @ Sat, 24 Aug 2019 16:54:31: #2 number of paired peaks: 562 WARNING @ Sat, 24 Aug 2019 16:54:31: Fewer paired peaks (562) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 562 pairs to build model! INFO @ Sat, 24 Aug 2019 16:54:31: start model_add_line... INFO @ Sat, 24 Aug 2019 16:54:32: start X-correlation... INFO @ Sat, 24 Aug 2019 16:54:32: end of X-cor INFO @ Sat, 24 Aug 2019 16:54:32: #2 finished! INFO @ Sat, 24 Aug 2019 16:54:32: #2 predicted fragment length is 51 bps INFO @ Sat, 24 Aug 2019 16:54:32: #2 alternative fragment length(s) may be 51,552 bps INFO @ Sat, 24 Aug 2019 16:54:32: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.10_model.r WARNING @ Sat, 24 Aug 2019 16:54:32: #2 Since the d (51) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 24 Aug 2019 16:54:32: #2 You may need to consider one of the other alternative d(s): 51,552 WARNING @ Sat, 24 Aug 2019 16:54:32: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 24 Aug 2019 16:54:32: #3 Call peaks... INFO @ Sat, 24 Aug 2019 16:54:32: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 16:54:33: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 16:54:33: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 16:54:33: #1 total tags in treatment: 50784388 INFO @ Sat, 24 Aug 2019 16:54:33: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 16:54:33: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 16:54:34: #1 tags after filtering in treatment: 50784264 INFO @ Sat, 24 Aug 2019 16:54:34: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 16:54:34: #1 finished! INFO @ Sat, 24 Aug 2019 16:54:34: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 16:54:34: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 16:54:34: 42000000 INFO @ Sat, 24 Aug 2019 16:54:37: #2 number of paired peaks: 562 WARNING @ Sat, 24 Aug 2019 16:54:37: Fewer paired peaks (562) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 562 pairs to build model! INFO @ Sat, 24 Aug 2019 16:54:37: start model_add_line... INFO @ Sat, 24 Aug 2019 16:54:37: start X-correlation... INFO @ Sat, 24 Aug 2019 16:54:37: end of X-cor INFO @ Sat, 24 Aug 2019 16:54:37: #2 finished! INFO @ Sat, 24 Aug 2019 16:54:37: #2 predicted fragment length is 51 bps INFO @ Sat, 24 Aug 2019 16:54:37: #2 alternative fragment length(s) may be 51,552 bps INFO @ Sat, 24 Aug 2019 16:54:37: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.05_model.r WARNING @ Sat, 24 Aug 2019 16:54:37: #2 Since the d (51) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 24 Aug 2019 16:54:37: #2 You may need to consider one of the other alternative d(s): 51,552 WARNING @ Sat, 24 Aug 2019 16:54:37: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 24 Aug 2019 16:54:37: #3 Call peaks... INFO @ Sat, 24 Aug 2019 16:54:37: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 16:54:39: 43000000 INFO @ Sat, 24 Aug 2019 16:54:43: 44000000 INFO @ Sat, 24 Aug 2019 16:54:48: 45000000 INFO @ Sat, 24 Aug 2019 16:54:52: 46000000 INFO @ Sat, 24 Aug 2019 16:54:57: 47000000 INFO @ Sat, 24 Aug 2019 16:55:01: 48000000 INFO @ Sat, 24 Aug 2019 16:55:05: 49000000 INFO @ Sat, 24 Aug 2019 16:55:10: 50000000 INFO @ Sat, 24 Aug 2019 16:55:14: #1 tag size is determined as 51 bps INFO @ Sat, 24 Aug 2019 16:55:14: #1 tag size = 51 INFO @ Sat, 24 Aug 2019 16:55:14: #1 total tags in treatment: 50784388 INFO @ Sat, 24 Aug 2019 16:55:14: #1 user defined the maximum tags... INFO @ Sat, 24 Aug 2019 16:55:14: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Sat, 24 Aug 2019 16:55:15: #1 tags after filtering in treatment: 50784264 INFO @ Sat, 24 Aug 2019 16:55:15: #1 Redundant rate of treatment: 0.00 INFO @ Sat, 24 Aug 2019 16:55:15: #1 finished! INFO @ Sat, 24 Aug 2019 16:55:15: #2 Build Peak Model... INFO @ Sat, 24 Aug 2019 16:55:15: #2 looking for paired plus/minus strand peaks... INFO @ Sat, 24 Aug 2019 16:55:18: #2 number of paired peaks: 562 WARNING @ Sat, 24 Aug 2019 16:55:18: Fewer paired peaks (562) than 1000! Model may not be build well! Lower your MFOLD parameter may erase this warning. Now I will use 562 pairs to build model! INFO @ Sat, 24 Aug 2019 16:55:18: start model_add_line... INFO @ Sat, 24 Aug 2019 16:55:18: start X-correlation... INFO @ Sat, 24 Aug 2019 16:55:18: end of X-cor INFO @ Sat, 24 Aug 2019 16:55:18: #2 finished! INFO @ Sat, 24 Aug 2019 16:55:18: #2 predicted fragment length is 51 bps INFO @ Sat, 24 Aug 2019 16:55:18: #2 alternative fragment length(s) may be 51,552 bps INFO @ Sat, 24 Aug 2019 16:55:18: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.20_model.r WARNING @ Sat, 24 Aug 2019 16:55:18: #2 Since the d (51) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Sat, 24 Aug 2019 16:55:18: #2 You may need to consider one of the other alternative d(s): 51,552 WARNING @ Sat, 24 Aug 2019 16:55:18: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Sat, 24 Aug 2019 16:55:18: #3 Call peaks... INFO @ Sat, 24 Aug 2019 16:55:18: #3 Pre-compute pvalue-qvalue table... INFO @ Sat, 24 Aug 2019 16:55:47: #3 Call peaks for each chromosome... INFO @ Sat, 24 Aug 2019 16:55:51: #3 Call peaks for each chromosome... INFO @ Sat, 24 Aug 2019 16:56:28: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.10_peaks.xls INFO @ Sat, 24 Aug 2019 16:56:28: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.10_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 16:56:28: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.10_summits.bed INFO @ Sat, 24 Aug 2019 16:56:28: Done! pass1 - making usageList (21 chroms): 1 millis pass2 - checking and writing primary data (376 records, 4 fields): 3 millis CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 16:56:32: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.05_peaks.xls INFO @ Sat, 24 Aug 2019 16:56:32: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.05_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 16:56:32: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.05_summits.bed INFO @ Sat, 24 Aug 2019 16:56:32: Done! pass1 - making usageList (23 chroms): 1 millis pass2 - checking and writing primary data (757 records, 4 fields): 2 millis CompletedMACS2peakCalling INFO @ Sat, 24 Aug 2019 16:56:33: #3 Call peaks for each chromosome... INFO @ Sat, 24 Aug 2019 16:57:14: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.20_peaks.xls INFO @ Sat, 24 Aug 2019 16:57:14: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.20_peaks.narrowPeak INFO @ Sat, 24 Aug 2019 16:57:14: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2901253/ERX2901253.20_summits.bed INFO @ Sat, 24 Aug 2019 16:57:14: Done! pass1 - making usageList (16 chroms): 1 millis pass2 - checking and writing primary data (109 records, 4 fields): 1 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。