Job ID = 10223667 SRX = ERX2745141 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-10-15T20:35:54 prefetch.2.10.7: 1) Downloading 'ERR2731916'... 2020-10-15T20:35:54 prefetch.2.10.7: Downloading via HTTPS... 2020-10-15T20:41:13 prefetch.2.10.7: HTTPS download succeed 2020-10-15T20:41:13 prefetch.2.10.7: 1) 'ERR2731916' was downloaded successfully Read 234446163 spots for ERR2731916/ERR2731916.sra Written 234446163 spots for ERR2731916/ERR2731916.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:04 Time loading mirror index: 00:00:01 Multiseed full-index search: 02:51:55 234446163 reads; of these: 234446163 (100.00%) were unpaired; of these: 4453857 (1.90%) aligned 0 times 162820394 (69.45%) aligned exactly 1 time 67171912 (28.65%) aligned >1 times 98.10% overall alignment rate Time searching: 02:52:02 Overall time: 02:52:02 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 96 files... [bam_rmdupse_core] 77809128 / 229992306 = 0.3383 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 09:16:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 09:16:47: #1 read tag files... INFO @ Fri, 16 Oct 2020 09:16:47: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 09:16:52: 1000000 INFO @ Fri, 16 Oct 2020 09:16:58: 2000000 INFO @ Fri, 16 Oct 2020 09:17:04: 3000000 INFO @ Fri, 16 Oct 2020 09:17:10: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 09:17:16: 5000000 INFO @ Fri, 16 Oct 2020 09:17:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 09:17:17: #1 read tag files... INFO @ Fri, 16 Oct 2020 09:17:17: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 09:17:22: 6000000 INFO @ Fri, 16 Oct 2020 09:17:23: 1000000 INFO @ Fri, 16 Oct 2020 09:17:28: 2000000 INFO @ Fri, 16 Oct 2020 09:17:29: 7000000 INFO @ Fri, 16 Oct 2020 09:17:34: 3000000 INFO @ Fri, 16 Oct 2020 09:17:35: 8000000 INFO @ Fri, 16 Oct 2020 09:17:40: 4000000 INFO @ Fri, 16 Oct 2020 09:17:41: 9000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 09:17:46: 5000000 INFO @ Fri, 16 Oct 2020 09:17:47: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 09:17:47: #1 read tag files... INFO @ Fri, 16 Oct 2020 09:17:47: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 09:17:47: 10000000 INFO @ Fri, 16 Oct 2020 09:17:51: 6000000 INFO @ Fri, 16 Oct 2020 09:17:53: 1000000 INFO @ Fri, 16 Oct 2020 09:17:54: 11000000 INFO @ Fri, 16 Oct 2020 09:17:57: 7000000 INFO @ Fri, 16 Oct 2020 09:17:59: 2000000 INFO @ Fri, 16 Oct 2020 09:18:00: 12000000 INFO @ Fri, 16 Oct 2020 09:18:03: 8000000 INFO @ Fri, 16 Oct 2020 09:18:06: 3000000 INFO @ Fri, 16 Oct 2020 09:18:06: 13000000 INFO @ Fri, 16 Oct 2020 09:18:09: 9000000 INFO @ Fri, 16 Oct 2020 09:18:12: 4000000 INFO @ Fri, 16 Oct 2020 09:18:13: 14000000 INFO @ Fri, 16 Oct 2020 09:18:14: 10000000 INFO @ Fri, 16 Oct 2020 09:18:18: 5000000 INFO @ Fri, 16 Oct 2020 09:18:19: 15000000 INFO @ Fri, 16 Oct 2020 09:18:20: 11000000 INFO @ Fri, 16 Oct 2020 09:18:25: 6000000 INFO @ Fri, 16 Oct 2020 09:18:26: 16000000 INFO @ Fri, 16 Oct 2020 09:18:26: 12000000 INFO @ Fri, 16 Oct 2020 09:18:31: 7000000 INFO @ Fri, 16 Oct 2020 09:18:32: 13000000 INFO @ Fri, 16 Oct 2020 09:18:32: 17000000 INFO @ Fri, 16 Oct 2020 09:18:37: 8000000 INFO @ Fri, 16 Oct 2020 09:18:37: 14000000 INFO @ Fri, 16 Oct 2020 09:18:38: 18000000 INFO @ Fri, 16 Oct 2020 09:18:43: 15000000 INFO @ Fri, 16 Oct 2020 09:18:44: 9000000 INFO @ Fri, 16 Oct 2020 09:18:45: 19000000 INFO @ Fri, 16 Oct 2020 09:18:49: 16000000 INFO @ Fri, 16 Oct 2020 09:18:51: 10000000 INFO @ Fri, 16 Oct 2020 09:18:51: 20000000 INFO @ Fri, 16 Oct 2020 09:18:55: 17000000 INFO @ Fri, 16 Oct 2020 09:18:57: 11000000 INFO @ Fri, 16 Oct 2020 09:18:57: 21000000 INFO @ Fri, 16 Oct 2020 09:19:00: 18000000 INFO @ Fri, 16 Oct 2020 09:19:03: 22000000 INFO @ Fri, 16 Oct 2020 09:19:04: 12000000 INFO @ Fri, 16 Oct 2020 09:19:06: 19000000 INFO @ Fri, 16 Oct 2020 09:19:10: 23000000 INFO @ Fri, 16 Oct 2020 09:19:10: 13000000 INFO @ Fri, 16 Oct 2020 09:19:12: 20000000 INFO @ Fri, 16 Oct 2020 09:19:16: 24000000 INFO @ Fri, 16 Oct 2020 09:19:17: 14000000 INFO @ Fri, 16 Oct 2020 09:19:18: 21000000 INFO @ Fri, 16 Oct 2020 09:19:22: 25000000 INFO @ Fri, 16 Oct 2020 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INFO @ Fri, 16 Oct 2020 09:21:02: 39000000 INFO @ Fri, 16 Oct 2020 09:21:03: 41000000 INFO @ Fri, 16 Oct 2020 09:21:03: 30000000 INFO @ Fri, 16 Oct 2020 09:21:08: 40000000 INFO @ Fri, 16 Oct 2020 09:21:09: 42000000 INFO @ Fri, 16 Oct 2020 09:21:10: 31000000 INFO @ Fri, 16 Oct 2020 09:21:13: 41000000 INFO @ Fri, 16 Oct 2020 09:21:16: 43000000 INFO @ Fri, 16 Oct 2020 09:21:17: 32000000 INFO @ Fri, 16 Oct 2020 09:21:19: 42000000 INFO @ Fri, 16 Oct 2020 09:21:22: 44000000 INFO @ Fri, 16 Oct 2020 09:21:24: 33000000 INFO @ Fri, 16 Oct 2020 09:21:25: 43000000 INFO @ Fri, 16 Oct 2020 09:21:28: 45000000 INFO @ Fri, 16 Oct 2020 09:21:30: 34000000 INFO @ Fri, 16 Oct 2020 09:21:31: 44000000 INFO @ Fri, 16 Oct 2020 09:21:35: 46000000 INFO @ Fri, 16 Oct 2020 09:21:36: 45000000 INFO @ Fri, 16 Oct 2020 09:21:37: 35000000 INFO @ Fri, 16 Oct 2020 09:21:41: 47000000 INFO @ Fri, 16 Oct 2020 09:21:42: 46000000 INFO @ Fri, 16 Oct 2020 09:21:43: 36000000 INFO @ Fri, 16 Oct 2020 09:21:47: 48000000 INFO @ Fri, 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09:22:36: 44000000 INFO @ Fri, 16 Oct 2020 09:22:38: 56000000 INFO @ Fri, 16 Oct 2020 09:22:40: 56000000 INFO @ Fri, 16 Oct 2020 09:22:42: 45000000 INFO @ Fri, 16 Oct 2020 09:22:44: 57000000 INFO @ Fri, 16 Oct 2020 09:22:46: 57000000 INFO @ Fri, 16 Oct 2020 09:22:49: 46000000 INFO @ Fri, 16 Oct 2020 09:22:50: 58000000 INFO @ Fri, 16 Oct 2020 09:22:52: 58000000 INFO @ Fri, 16 Oct 2020 09:22:55: 47000000 INFO @ Fri, 16 Oct 2020 09:22:57: 59000000 INFO @ Fri, 16 Oct 2020 09:22:58: 59000000 INFO @ Fri, 16 Oct 2020 09:23:01: 48000000 INFO @ Fri, 16 Oct 2020 09:23:03: 60000000 INFO @ Fri, 16 Oct 2020 09:23:04: 60000000 INFO @ Fri, 16 Oct 2020 09:23:08: 49000000 INFO @ Fri, 16 Oct 2020 09:23:09: 61000000 INFO @ Fri, 16 Oct 2020 09:23:10: 61000000 INFO @ Fri, 16 Oct 2020 09:23:14: 50000000 INFO @ Fri, 16 Oct 2020 09:23:16: 62000000 INFO @ Fri, 16 Oct 2020 09:23:17: 62000000 INFO @ Fri, 16 Oct 2020 09:23:21: 51000000 INFO @ Fri, 16 Oct 2020 09:23:22: 63000000 INFO @ Fri, 16 Oct 2020 09:23:23: 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INFO @ Fri, 16 Oct 2020 09:24:14: 71000000 INFO @ Fri, 16 Oct 2020 09:24:18: 60000000 INFO @ Fri, 16 Oct 2020 09:24:20: 72000000 INFO @ Fri, 16 Oct 2020 09:24:21: 72000000 INFO @ Fri, 16 Oct 2020 09:24:25: 61000000 INFO @ Fri, 16 Oct 2020 09:24:26: 73000000 INFO @ Fri, 16 Oct 2020 09:24:27: 73000000 INFO @ Fri, 16 Oct 2020 09:24:31: 62000000 INFO @ Fri, 16 Oct 2020 09:24:32: 74000000 INFO @ Fri, 16 Oct 2020 09:24:33: 74000000 INFO @ Fri, 16 Oct 2020 09:24:38: 63000000 INFO @ Fri, 16 Oct 2020 09:24:39: 75000000 INFO @ Fri, 16 Oct 2020 09:24:40: 75000000 INFO @ Fri, 16 Oct 2020 09:24:45: 64000000 INFO @ Fri, 16 Oct 2020 09:24:45: 76000000 INFO @ Fri, 16 Oct 2020 09:24:46: 76000000 INFO @ Fri, 16 Oct 2020 09:24:51: 65000000 INFO @ Fri, 16 Oct 2020 09:24:52: 77000000 INFO @ Fri, 16 Oct 2020 09:24:53: 77000000 INFO @ Fri, 16 Oct 2020 09:24:58: 66000000 INFO @ Fri, 16 Oct 2020 09:24:58: 78000000 INFO @ Fri, 16 Oct 2020 09:24:59: 78000000 INFO @ Fri, 16 Oct 2020 09:25:05: 67000000 INFO @ Fri, 16 Oct 2020 09:25:05: 79000000 INFO @ Fri, 16 Oct 2020 09:25:05: 79000000 INFO @ Fri, 16 Oct 2020 09:25:11: 80000000 INFO @ Fri, 16 Oct 2020 09:25:11: 68000000 INFO @ Fri, 16 Oct 2020 09:25:12: 80000000 INFO @ Fri, 16 Oct 2020 09:25:17: 81000000 INFO @ Fri, 16 Oct 2020 09:25:17: 69000000 INFO @ Fri, 16 Oct 2020 09:25:18: 81000000 INFO @ Fri, 16 Oct 2020 09:25:23: 70000000 INFO @ Fri, 16 Oct 2020 09:25:24: 82000000 INFO @ Fri, 16 Oct 2020 09:25:25: 82000000 INFO @ Fri, 16 Oct 2020 09:25:29: 71000000 INFO @ Fri, 16 Oct 2020 09:25:30: 83000000 INFO @ Fri, 16 Oct 2020 09:25:31: 83000000 INFO @ Fri, 16 Oct 2020 09:25:35: 72000000 INFO @ Fri, 16 Oct 2020 09:25:37: 84000000 INFO @ Fri, 16 Oct 2020 09:25:38: 84000000 INFO @ Fri, 16 Oct 2020 09:25:41: 73000000 INFO @ Fri, 16 Oct 2020 09:25:43: 85000000 INFO @ Fri, 16 Oct 2020 09:25:44: 85000000 INFO @ Fri, 16 Oct 2020 09:25:47: 74000000 INFO @ Fri, 16 Oct 2020 09:25:50: 86000000 INFO @ Fri, 16 Oct 2020 09:25:51: 86000000 INFO @ Fri, 16 Oct 2020 09:25:52: 75000000 INFO @ Fri, 16 Oct 2020 09:25:56: 87000000 INFO @ Fri, 16 Oct 2020 09:25:57: 87000000 INFO @ Fri, 16 Oct 2020 09:25:58: 76000000 INFO @ Fri, 16 Oct 2020 09:26:03: 88000000 INFO @ Fri, 16 Oct 2020 09:26:03: 88000000 INFO @ Fri, 16 Oct 2020 09:26:04: 77000000 INFO @ Fri, 16 Oct 2020 09:26:09: 89000000 INFO @ Fri, 16 Oct 2020 09:26:10: 89000000 INFO @ Fri, 16 Oct 2020 09:26:10: 78000000 INFO @ Fri, 16 Oct 2020 09:26:15: 90000000 INFO @ Fri, 16 Oct 2020 09:26:16: 79000000 INFO @ Fri, 16 Oct 2020 09:26:16: 90000000 INFO @ Fri, 16 Oct 2020 09:26:22: 80000000 INFO @ Fri, 16 Oct 2020 09:26:22: 91000000 INFO @ Fri, 16 Oct 2020 09:26:23: 91000000 INFO @ Fri, 16 Oct 2020 09:26:27: 81000000 INFO @ Fri, 16 Oct 2020 09:26:28: 92000000 INFO @ Fri, 16 Oct 2020 09:26:29: 92000000 INFO @ Fri, 16 Oct 2020 09:26:33: 82000000 INFO @ Fri, 16 Oct 2020 09:26:34: 93000000 INFO @ Fri, 16 Oct 2020 09:26:35: 93000000 INFO @ Fri, 16 Oct 2020 09:26:39: 83000000 INFO @ Fri, 16 Oct 2020 09:26:41: 94000000 INFO @ Fri, 16 Oct 2020 09:26:42: 94000000 INFO @ Fri, 16 Oct 2020 09:26:45: 84000000 INFO @ Fri, 16 Oct 2020 09:26:47: 95000000 INFO @ Fri, 16 Oct 2020 09:26:48: 95000000 INFO @ Fri, 16 Oct 2020 09:26:50: 85000000 INFO @ Fri, 16 Oct 2020 09:26:53: 96000000 INFO @ Fri, 16 Oct 2020 09:26:54: 96000000 INFO @ Fri, 16 Oct 2020 09:26:56: 86000000 INFO @ Fri, 16 Oct 2020 09:27:00: 97000000 INFO @ Fri, 16 Oct 2020 09:27:01: 97000000 INFO @ Fri, 16 Oct 2020 09:27:02: 87000000 INFO @ Fri, 16 Oct 2020 09:27:06: 98000000 INFO @ Fri, 16 Oct 2020 09:27:07: 98000000 INFO @ Fri, 16 Oct 2020 09:27:08: 88000000 INFO @ Fri, 16 Oct 2020 09:27:13: 99000000 INFO @ Fri, 16 Oct 2020 09:27:13: 89000000 INFO @ Fri, 16 Oct 2020 09:27:14: 99000000 INFO @ Fri, 16 Oct 2020 09:27:19: 90000000 INFO @ Fri, 16 Oct 2020 09:27:19: 100000000 INFO @ Fri, 16 Oct 2020 09:27:20: 100000000 INFO @ Fri, 16 Oct 2020 09:27:25: 91000000 INFO @ Fri, 16 Oct 2020 09:27:26: 101000000 INFO @ Fri, 16 Oct 2020 09:27:26: 101000000 INFO @ Fri, 16 Oct 2020 09:27:31: 92000000 INFO @ Fri, 16 Oct 2020 09:27:32: 102000000 INFO @ Fri, 16 Oct 2020 09:27:33: 102000000 INFO @ Fri, 16 Oct 2020 09:27:38: 93000000 INFO @ Fri, 16 Oct 2020 09:27:38: 103000000 INFO @ Fri, 16 Oct 2020 09:27:39: 103000000 INFO @ Fri, 16 Oct 2020 09:27:44: 94000000 INFO @ Fri, 16 Oct 2020 09:27:44: 104000000 INFO @ Fri, 16 Oct 2020 09:27:45: 104000000 INFO @ Fri, 16 Oct 2020 09:27:50: 95000000 INFO @ Fri, 16 Oct 2020 09:27:51: 105000000 INFO @ Fri, 16 Oct 2020 09:27:52: 105000000 INFO @ Fri, 16 Oct 2020 09:27:55: 96000000 INFO @ Fri, 16 Oct 2020 09:27:57: 106000000 INFO @ Fri, 16 Oct 2020 09:27:58: 106000000 INFO @ Fri, 16 Oct 2020 09:28:01: 97000000 INFO @ Fri, 16 Oct 2020 09:28:03: 107000000 INFO @ Fri, 16 Oct 2020 09:28:04: 107000000 INFO @ Fri, 16 Oct 2020 09:28:07: 98000000 INFO @ Fri, 16 Oct 2020 09:28:10: 108000000 INFO @ Fri, 16 Oct 2020 09:28:11: 108000000 INFO @ Fri, 16 Oct 2020 09:28:13: 99000000 INFO @ Fri, 16 Oct 2020 09:28:16: 109000000 INFO @ Fri, 16 Oct 2020 09:28:17: 109000000 INFO @ Fri, 16 Oct 2020 09:28:19: 100000000 INFO @ Fri, 16 Oct 2020 09:28:22: 110000000 INFO @ Fri, 16 Oct 2020 09:28:23: 110000000 INFO @ Fri, 16 Oct 2020 09:28:24: 101000000 INFO @ Fri, 16 Oct 2020 09:28:28: 111000000 INFO @ Fri, 16 Oct 2020 09:28:29: 111000000 INFO @ Fri, 16 Oct 2020 09:28:30: 102000000 INFO @ Fri, 16 Oct 2020 09:28:35: 112000000 INFO @ Fri, 16 Oct 2020 09:28:36: 112000000 INFO @ Fri, 16 Oct 2020 09:28:36: 103000000 INFO @ Fri, 16 Oct 2020 09:28:41: 113000000 INFO @ Fri, 16 Oct 2020 09:28:42: 104000000 INFO @ Fri, 16 Oct 2020 09:28:42: 113000000 INFO @ Fri, 16 Oct 2020 09:28:47: 114000000 INFO @ Fri, 16 Oct 2020 09:28:47: 105000000 INFO @ Fri, 16 Oct 2020 09:28:48: 114000000 INFO @ Fri, 16 Oct 2020 09:28:53: 106000000 INFO @ Fri, 16 Oct 2020 09:28:53: 115000000 INFO @ Fri, 16 Oct 2020 09:28:54: 115000000 INFO @ Fri, 16 Oct 2020 09:28:59: 107000000 INFO @ Fri, 16 Oct 2020 09:29:00: 116000000 INFO @ Fri, 16 Oct 2020 09:29:00: 116000000 INFO @ Fri, 16 Oct 2020 09:29:05: 108000000 INFO @ Fri, 16 Oct 2020 09:29:06: 117000000 INFO @ Fri, 16 Oct 2020 09:29:07: 117000000 INFO @ Fri, 16 Oct 2020 09:29:10: 109000000 INFO @ Fri, 16 Oct 2020 09:29:12: 118000000 INFO @ Fri, 16 Oct 2020 09:29:13: 118000000 INFO @ Fri, 16 Oct 2020 09:29:16: 110000000 INFO @ Fri, 16 Oct 2020 09:29:18: 119000000 INFO @ Fri, 16 Oct 2020 09:29:19: 119000000 INFO @ Fri, 16 Oct 2020 09:29:22: 111000000 INFO @ Fri, 16 Oct 2020 09:29:24: 120000000 INFO @ Fri, 16 Oct 2020 09:29:25: 120000000 INFO @ Fri, 16 Oct 2020 09:29:27: 112000000 INFO @ Fri, 16 Oct 2020 09:29:31: 121000000 INFO @ Fri, 16 Oct 2020 09:29:32: 121000000 INFO @ Fri, 16 Oct 2020 09:29:33: 113000000 INFO @ Fri, 16 Oct 2020 09:29:37: 122000000 INFO @ Fri, 16 Oct 2020 09:29:38: 122000000 INFO @ Fri, 16 Oct 2020 09:29:39: 114000000 INFO @ Fri, 16 Oct 2020 09:29:43: 123000000 INFO @ Fri, 16 Oct 2020 09:29:44: 123000000 INFO @ Fri, 16 Oct 2020 09:29:44: 115000000 INFO @ Fri, 16 Oct 2020 09:29:50: 124000000 INFO @ Fri, 16 Oct 2020 09:29:50: 116000000 INFO @ Fri, 16 Oct 2020 09:29:50: 124000000 INFO @ Fri, 16 Oct 2020 09:29:56: 117000000 INFO @ Fri, 16 Oct 2020 09:29:56: 125000000 INFO @ Fri, 16 Oct 2020 09:29:57: 125000000 INFO @ Fri, 16 Oct 2020 09:30:01: 118000000 INFO @ Fri, 16 Oct 2020 09:30:02: 126000000 INFO @ Fri, 16 Oct 2020 09:30:03: 126000000 INFO @ Fri, 16 Oct 2020 09:30:07: 119000000 INFO @ Fri, 16 Oct 2020 09:30:09: 127000000 INFO @ Fri, 16 Oct 2020 09:30:09: 127000000 INFO @ Fri, 16 Oct 2020 09:30:13: 120000000 INFO @ Fri, 16 Oct 2020 09:30:15: 128000000 INFO @ Fri, 16 Oct 2020 09:30:16: 128000000 INFO @ Fri, 16 Oct 2020 09:30:18: 121000000 INFO @ Fri, 16 Oct 2020 09:30:21: 129000000 INFO @ Fri, 16 Oct 2020 09:30:22: 129000000 INFO @ Fri, 16 Oct 2020 09:30:24: 122000000 INFO @ Fri, 16 Oct 2020 09:30:28: 130000000 INFO @ Fri, 16 Oct 2020 09:30:29: 130000000 INFO @ Fri, 16 Oct 2020 09:30:30: 123000000 INFO @ Fri, 16 Oct 2020 09:30:34: 131000000 INFO @ Fri, 16 Oct 2020 09:30:35: 131000000 INFO @ Fri, 16 Oct 2020 09:30:36: 124000000 INFO @ Fri, 16 Oct 2020 09:30:40: 132000000 INFO @ Fri, 16 Oct 2020 09:30:41: 132000000 INFO @ Fri, 16 Oct 2020 09:30:41: 125000000 INFO @ Fri, 16 Oct 2020 09:30:47: 133000000 INFO @ Fri, 16 Oct 2020 09:30:47: 126000000 INFO @ Fri, 16 Oct 2020 09:30:48: 133000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 16 Oct 2020 09:30:53: 127000000 INFO @ Fri, 16 Oct 2020 09:30:53: 134000000 INFO @ Fri, 16 Oct 2020 09:30:54: 134000000 INFO @ Fri, 16 Oct 2020 09:30:59: 128000000 INFO @ Fri, 16 Oct 2020 09:31:00: 135000000 INFO @ Fri, 16 Oct 2020 09:31:01: 135000000 INFO @ Fri, 16 Oct 2020 09:31:04: 129000000 INFO @ Fri, 16 Oct 2020 09:31:06: 136000000 INFO @ Fri, 16 Oct 2020 09:31:07: 136000000 INFO @ Fri, 16 Oct 2020 09:31:10: 130000000 INFO @ Fri, 16 Oct 2020 09:31:12: 137000000 INFO @ Fri, 16 Oct 2020 09:31:13: 137000000 INFO @ Fri, 16 Oct 2020 09:31:16: 131000000 INFO @ Fri, 16 Oct 2020 09:31:19: 138000000 INFO @ Fri, 16 Oct 2020 09:31:20: 138000000 INFO @ Fri, 16 Oct 2020 09:31:22: 132000000 INFO @ Fri, 16 Oct 2020 09:31:25: 139000000 INFO @ Fri, 16 Oct 2020 09:31:26: 139000000 INFO @ Fri, 16 Oct 2020 09:31:28: 133000000 INFO @ Fri, 16 Oct 2020 09:31:31: 140000000 INFO @ Fri, 16 Oct 2020 09:31:32: 140000000 INFO @ Fri, 16 Oct 2020 09:31:33: 134000000 INFO @ Fri, 16 Oct 2020 09:31:38: 141000000 INFO @ Fri, 16 Oct 2020 09:31:39: 141000000 INFO @ Fri, 16 Oct 2020 09:31:39: 135000000 INFO @ Fri, 16 Oct 2020 09:31:44: 142000000 INFO @ Fri, 16 Oct 2020 09:31:45: 142000000 INFO @ Fri, 16 Oct 2020 09:31:45: 136000000 INFO @ Fri, 16 Oct 2020 09:31:51: 143000000 INFO @ Fri, 16 Oct 2020 09:31:51: 137000000 INFO @ Fri, 16 Oct 2020 09:31:51: 143000000 INFO @ Fri, 16 Oct 2020 09:31:57: 138000000 INFO @ Fri, 16 Oct 2020 09:31:57: 144000000 INFO @ Fri, 16 Oct 2020 09:31:58: 144000000 INFO @ Fri, 16 Oct 2020 09:32:02: 139000000 INFO @ Fri, 16 Oct 2020 09:32:03: 145000000 INFO @ Fri, 16 Oct 2020 09:32:04: 145000000 INFO @ Fri, 16 Oct 2020 09:32:08: 140000000 INFO @ Fri, 16 Oct 2020 09:32:10: 146000000 INFO @ Fri, 16 Oct 2020 09:32:10: 146000000 INFO @ Fri, 16 Oct 2020 09:32:14: 141000000 INFO @ Fri, 16 Oct 2020 09:32:16: 147000000 INFO @ Fri, 16 Oct 2020 09:32:17: 147000000 INFO @ Fri, 16 Oct 2020 09:32:20: 142000000 INFO @ Fri, 16 Oct 2020 09:32:22: 148000000 INFO @ Fri, 16 Oct 2020 09:32:23: 148000000 INFO @ Fri, 16 Oct 2020 09:32:25: 143000000 INFO @ Fri, 16 Oct 2020 09:32:29: 149000000 INFO @ Fri, 16 Oct 2020 09:32:30: 149000000 INFO @ Fri, 16 Oct 2020 09:32:31: 144000000 INFO @ Fri, 16 Oct 2020 09:32:35: 150000000 INFO @ Fri, 16 Oct 2020 09:32:36: 150000000 INFO @ Fri, 16 Oct 2020 09:32:37: 145000000 INFO @ Fri, 16 Oct 2020 09:32:42: 151000000 INFO @ Fri, 16 Oct 2020 09:32:43: 151000000 INFO @ Fri, 16 Oct 2020 09:32:43: 146000000 INFO @ Fri, 16 Oct 2020 09:32:48: 152000000 INFO @ Fri, 16 Oct 2020 09:32:49: 147000000 INFO @ Fri, 16 Oct 2020 09:32:49: 152000000 INFO @ Fri, 16 Oct 2020 09:32:50: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 09:32:50: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 09:32:50: #1 total tags in treatment: 152183178 INFO @ Fri, 16 Oct 2020 09:32:50: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 09:32:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 09:32:51: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 09:32:51: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 09:32:51: #1 total tags in treatment: 152183178 INFO @ Fri, 16 Oct 2020 09:32:51: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 09:32:51: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 09:32:53: #1 tags after filtering in treatment: 152183169 INFO @ Fri, 16 Oct 2020 09:32:53: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 09:32:53: #1 finished! INFO @ Fri, 16 Oct 2020 09:32:53: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 09:32:53: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 09:32:54: #1 tags after filtering in treatment: 152183169 INFO @ Fri, 16 Oct 2020 09:32:54: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 09:32:54: #1 finished! INFO @ Fri, 16 Oct 2020 09:32:54: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 09:32:54: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 09:32:54: 148000000 INFO @ Fri, 16 Oct 2020 09:33:00: 149000000 INFO @ Fri, 16 Oct 2020 09:33:03: #2 number of paired peaks: 5969 INFO @ Fri, 16 Oct 2020 09:33:03: start model_add_line... INFO @ Fri, 16 Oct 2020 09:33:04: #2 number of paired peaks: 5969 INFO @ Fri, 16 Oct 2020 09:33:04: start model_add_line... INFO @ Fri, 16 Oct 2020 09:33:04: start X-correlation... INFO @ Fri, 16 Oct 2020 09:33:04: end of X-cor INFO @ Fri, 16 Oct 2020 09:33:04: #2 finished! INFO @ Fri, 16 Oct 2020 09:33:04: #2 predicted fragment length is 49 bps INFO @ Fri, 16 Oct 2020 09:33:04: #2 alternative fragment length(s) may be 4,49 bps INFO @ Fri, 16 Oct 2020 09:33:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.05_model.r WARNING @ Fri, 16 Oct 2020 09:33:04: #2 Since the d (49) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 16 Oct 2020 09:33:04: #2 You may need to consider one of the other alternative d(s): 4,49 WARNING @ Fri, 16 Oct 2020 09:33:04: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 16 Oct 2020 09:33:04: #3 Call peaks... INFO @ Fri, 16 Oct 2020 09:33:04: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 16 Oct 2020 09:33:05: 150000000 INFO @ Fri, 16 Oct 2020 09:33:05: start X-correlation... INFO @ Fri, 16 Oct 2020 09:33:05: end of X-cor INFO @ Fri, 16 Oct 2020 09:33:05: #2 finished! INFO @ Fri, 16 Oct 2020 09:33:05: #2 predicted fragment length is 49 bps INFO @ Fri, 16 Oct 2020 09:33:05: #2 alternative fragment length(s) may be 4,49 bps INFO @ Fri, 16 Oct 2020 09:33:05: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.10_model.r WARNING @ Fri, 16 Oct 2020 09:33:05: #2 Since the d (49) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 16 Oct 2020 09:33:05: #2 You may need to consider one of the other alternative d(s): 4,49 WARNING @ Fri, 16 Oct 2020 09:33:05: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 16 Oct 2020 09:33:05: #3 Call peaks... INFO @ Fri, 16 Oct 2020 09:33:05: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 16 Oct 2020 09:33:11: 151000000 INFO @ Fri, 16 Oct 2020 09:33:16: 152000000 INFO @ Fri, 16 Oct 2020 09:33:18: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 09:33:18: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 09:33:18: #1 total tags in treatment: 152183178 INFO @ Fri, 16 Oct 2020 09:33:18: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 09:33:18: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 09:33:21: #1 tags after filtering in treatment: 152183169 INFO @ Fri, 16 Oct 2020 09:33:21: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 09:33:21: #1 finished! INFO @ Fri, 16 Oct 2020 09:33:21: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 09:33:21: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 09:33:31: #2 number of paired peaks: 5969 INFO @ Fri, 16 Oct 2020 09:33:31: start model_add_line... INFO @ Fri, 16 Oct 2020 09:33:32: start X-correlation... INFO @ Fri, 16 Oct 2020 09:33:32: end of X-cor INFO @ Fri, 16 Oct 2020 09:33:32: #2 finished! INFO @ Fri, 16 Oct 2020 09:33:32: #2 predicted fragment length is 49 bps INFO @ Fri, 16 Oct 2020 09:33:32: #2 alternative fragment length(s) may be 4,49 bps INFO @ Fri, 16 Oct 2020 09:33:32: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.20_model.r WARNING @ Fri, 16 Oct 2020 09:33:32: #2 Since the d (49) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 16 Oct 2020 09:33:32: #2 You may need to consider one of the other alternative d(s): 4,49 WARNING @ Fri, 16 Oct 2020 09:33:32: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 16 Oct 2020 09:33:32: #3 Call peaks... INFO @ Fri, 16 Oct 2020 09:33:32: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Fri, 16 Oct 2020 09:38:27: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 09:38:33: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 09:38:48: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 09:41:11: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.05_peaks.xls INFO @ Fri, 16 Oct 2020 09:41:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.05_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 09:41:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.05_summits.bed INFO @ Fri, 16 Oct 2020 09:41:11: Done! pass1 - making usageList (102 chroms): 2 millis pass2 - checking and writing primary data (6408 records, 4 fields): 9 millis CompletedMACS2peakCalling INFO @ Fri, 16 Oct 2020 09:41:13: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.10_peaks.xls INFO @ Fri, 16 Oct 2020 09:41:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.10_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 09:41:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.10_summits.bed INFO @ Fri, 16 Oct 2020 09:41:13: Done! pass1 - making usageList (73 chroms): 1 millis pass2 - checking and writing primary data (2913 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Fri, 16 Oct 2020 09:41:30: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.20_peaks.xls INFO @ Fri, 16 Oct 2020 09:41:30: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.20_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 09:41:30: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745141/ERX2745141.20_summits.bed INFO @ Fri, 16 Oct 2020 09:41:30: Done! pass1 - making usageList (49 chroms): 1 millis pass2 - checking and writing primary data (1100 records, 4 fields): 4 millis CompletedMACS2peakCalling