Job ID = 10223661 SRX = ERX2745136 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-10-15T20:19:58 prefetch.2.10.7: 1) Downloading 'ERR2731911'... 2020-10-15T20:19:58 prefetch.2.10.7: Downloading via HTTPS... 2020-10-15T20:22:15 prefetch.2.10.7: HTTPS download succeed 2020-10-15T20:22:15 prefetch.2.10.7: 1) 'ERR2731911' was downloaded successfully Read 121237708 spots for ERR2731911/ERR2731911.sra Written 121237708 spots for ERR2731911/ERR2731911.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:29:42 121237708 reads; of these: 121237708 (100.00%) were unpaired; of these: 3343751 (2.76%) aligned 0 times 82033535 (67.66%) aligned exactly 1 time 35860422 (29.58%) aligned >1 times 97.24% overall alignment rate Time searching: 01:29:45 Overall time: 01:29:46 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 52 files... [bam_rmdupse_core] 22582731 / 117893957 = 0.1916 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 07:17:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 07:17:56: #1 read tag files... INFO @ Fri, 16 Oct 2020 07:17:56: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 07:18:03: 1000000 INFO @ Fri, 16 Oct 2020 07:18:09: 2000000 INFO @ Fri, 16 Oct 2020 07:18:15: 3000000 INFO @ Fri, 16 Oct 2020 07:18:21: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 07:18:26: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 07:18:26: #1 read tag files... INFO @ Fri, 16 Oct 2020 07:18:26: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 07:18:27: 5000000 INFO @ Fri, 16 Oct 2020 07:18:33: 1000000 INFO @ Fri, 16 Oct 2020 07:18:35: 6000000 INFO @ Fri, 16 Oct 2020 07:18:40: 2000000 INFO @ Fri, 16 Oct 2020 07:18:42: 7000000 INFO @ Fri, 16 Oct 2020 07:18:47: 3000000 INFO @ Fri, 16 Oct 2020 07:18:49: 8000000 INFO @ Fri, 16 Oct 2020 07:18:54: 4000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 07:18:56: 9000000 INFO @ Fri, 16 Oct 2020 07:18:56: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 07:18:56: #1 read tag files... INFO @ Fri, 16 Oct 2020 07:18:56: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 07:19:01: 5000000 INFO @ Fri, 16 Oct 2020 07:19:03: 10000000 INFO @ Fri, 16 Oct 2020 07:19:04: 1000000 INFO @ Fri, 16 Oct 2020 07:19:09: 6000000 INFO @ Fri, 16 Oct 2020 07:19:11: 11000000 INFO @ Fri, 16 Oct 2020 07:19:12: 2000000 INFO @ Fri, 16 Oct 2020 07:19:16: 7000000 INFO @ Fri, 16 Oct 2020 07:19:18: 12000000 INFO @ Fri, 16 Oct 2020 07:19:20: 3000000 INFO @ Fri, 16 Oct 2020 07:19:24: 8000000 INFO @ Fri, 16 Oct 2020 07:19:26: 13000000 INFO @ Fri, 16 Oct 2020 07:19:28: 4000000 INFO @ Fri, 16 Oct 2020 07:19:31: 9000000 INFO @ Fri, 16 Oct 2020 07:19:33: 14000000 INFO @ Fri, 16 Oct 2020 07:19:36: 5000000 INFO @ Fri, 16 Oct 2020 07:19:39: 10000000 INFO @ Fri, 16 Oct 2020 07:19:41: 15000000 INFO @ Fri, 16 Oct 2020 07:19:44: 6000000 INFO @ Fri, 16 Oct 2020 07:19:46: 11000000 INFO @ Fri, 16 Oct 2020 07:19:48: 16000000 INFO @ Fri, 16 Oct 2020 07:19:52: 7000000 INFO @ Fri, 16 Oct 2020 07:19:54: 12000000 INFO @ Fri, 16 Oct 2020 07:19:56: 17000000 INFO @ Fri, 16 Oct 2020 07:20:00: 8000000 INFO @ Fri, 16 Oct 2020 07:20:01: 13000000 INFO @ Fri, 16 Oct 2020 07:20:03: 18000000 INFO @ Fri, 16 Oct 2020 07:20:08: 14000000 INFO @ Fri, 16 Oct 2020 07:20:08: 9000000 INFO @ Fri, 16 Oct 2020 07:20:10: 19000000 INFO @ Fri, 16 Oct 2020 07:20:16: 15000000 INFO @ Fri, 16 Oct 2020 07:20:17: 10000000 INFO @ Fri, 16 Oct 2020 07:20:18: 20000000 INFO @ Fri, 16 Oct 2020 07:20:23: 16000000 INFO @ Fri, 16 Oct 2020 07:20:25: 11000000 INFO @ Fri, 16 Oct 2020 07:20:25: 21000000 INFO @ Fri, 16 Oct 2020 07:20:30: 17000000 INFO @ Fri, 16 Oct 2020 07:20:33: 22000000 INFO @ Fri, 16 Oct 2020 07:20:33: 12000000 INFO @ Fri, 16 Oct 2020 07:20:37: 18000000 INFO @ Fri, 16 Oct 2020 07:20:40: 23000000 INFO @ Fri, 16 Oct 2020 07:20:41: 13000000 INFO @ Fri, 16 Oct 2020 07:20:45: 19000000 INFO @ Fri, 16 Oct 2020 07:20:47: 24000000 INFO @ Fri, 16 Oct 2020 07:20:49: 14000000 INFO @ Fri, 16 Oct 2020 07:20:52: 20000000 INFO @ Fri, 16 Oct 2020 07:20:55: 25000000 INFO @ Fri, 16 Oct 2020 07:20:57: 15000000 INFO @ Fri, 16 Oct 2020 07:20:59: 21000000 INFO @ Fri, 16 Oct 2020 07:21:02: 26000000 INFO @ Fri, 16 Oct 2020 07:21:05: 16000000 INFO @ Fri, 16 Oct 2020 07:21:07: 22000000 INFO @ Fri, 16 Oct 2020 07:21:09: 27000000 INFO @ Fri, 16 Oct 2020 07:21:13: 17000000 INFO @ Fri, 16 Oct 2020 07:21:14: 23000000 INFO @ Fri, 16 Oct 2020 07:21:17: 28000000 INFO @ Fri, 16 Oct 2020 07:21:21: 18000000 INFO @ Fri, 16 Oct 2020 07:21:21: 24000000 INFO @ Fri, 16 Oct 2020 07:21:24: 29000000 INFO @ Fri, 16 Oct 2020 07:21:29: 25000000 INFO @ Fri, 16 Oct 2020 07:21:29: 19000000 INFO @ Fri, 16 Oct 2020 07:21:32: 30000000 INFO @ Fri, 16 Oct 2020 07:21:36: 26000000 INFO @ Fri, 16 Oct 2020 07:21:37: 20000000 INFO @ Fri, 16 Oct 2020 07:21:39: 31000000 INFO @ Fri, 16 Oct 2020 07:21:43: 27000000 INFO @ Fri, 16 Oct 2020 07:21:45: 21000000 INFO @ Fri, 16 Oct 2020 07:21:47: 32000000 INFO @ Fri, 16 Oct 2020 07:21:50: 28000000 INFO @ Fri, 16 Oct 2020 07:21:53: 22000000 INFO @ Fri, 16 Oct 2020 07:21:54: 33000000 INFO @ Fri, 16 Oct 2020 07:21:58: 29000000 INFO @ Fri, 16 Oct 2020 07:22:01: 23000000 INFO @ Fri, 16 Oct 2020 07:22:02: 34000000 INFO @ Fri, 16 Oct 2020 07:22:05: 30000000 INFO @ Fri, 16 Oct 2020 07:22:08: 24000000 INFO @ Fri, 16 Oct 2020 07:22:09: 35000000 INFO @ Fri, 16 Oct 2020 07:22:12: 31000000 INFO @ Fri, 16 Oct 2020 07:22:16: 36000000 INFO @ Fri, 16 Oct 2020 07:22:16: 25000000 INFO @ Fri, 16 Oct 2020 07:22:20: 32000000 INFO @ Fri, 16 Oct 2020 07:22:23: 37000000 INFO @ Fri, 16 Oct 2020 07:22:24: 26000000 INFO @ Fri, 16 Oct 2020 07:22:27: 33000000 INFO @ Fri, 16 Oct 2020 07:22:31: 38000000 INFO @ Fri, 16 Oct 2020 07:22:32: 27000000 INFO @ Fri, 16 Oct 2020 07:22:34: 34000000 INFO @ Fri, 16 Oct 2020 07:22:38: 39000000 INFO @ Fri, 16 Oct 2020 07:22:40: 28000000 INFO @ Fri, 16 Oct 2020 07:22:42: 35000000 INFO @ Fri, 16 Oct 2020 07:22:46: 40000000 INFO @ Fri, 16 Oct 2020 07:22:48: 29000000 INFO @ Fri, 16 Oct 2020 07:22:49: 36000000 INFO @ Fri, 16 Oct 2020 07:22:53: 41000000 INFO @ Fri, 16 Oct 2020 07:22:56: 30000000 INFO @ Fri, 16 Oct 2020 07:22:57: 37000000 INFO @ Fri, 16 Oct 2020 07:23:01: 42000000 INFO @ Fri, 16 Oct 2020 07:23:04: 31000000 INFO @ Fri, 16 Oct 2020 07:23:04: 38000000 INFO @ Fri, 16 Oct 2020 07:23:08: 43000000 INFO @ Fri, 16 Oct 2020 07:23:12: 32000000 INFO @ Fri, 16 Oct 2020 07:23:12: 39000000 INFO @ Fri, 16 Oct 2020 07:23:16: 44000000 INFO @ Fri, 16 Oct 2020 07:23:19: 33000000 INFO @ Fri, 16 Oct 2020 07:23:19: 40000000 INFO @ Fri, 16 Oct 2020 07:23:23: 45000000 INFO @ Fri, 16 Oct 2020 07:23:27: 41000000 INFO @ Fri, 16 Oct 2020 07:23:27: 34000000 INFO @ Fri, 16 Oct 2020 07:23:31: 46000000 INFO @ Fri, 16 Oct 2020 07:23:35: 42000000 INFO @ Fri, 16 Oct 2020 07:23:38: 47000000 INFO @ Fri, 16 Oct 2020 07:23:42: 43000000 INFO @ Fri, 16 Oct 2020 07:23:44: 35000000 INFO @ Fri, 16 Oct 2020 07:23:46: 48000000 INFO @ Fri, 16 Oct 2020 07:23:49: 44000000 INFO @ Fri, 16 Oct 2020 07:23:53: 49000000 INFO @ Fri, 16 Oct 2020 07:23:56: 45000000 INFO @ Fri, 16 Oct 2020 07:24:00: 50000000 INFO @ Fri, 16 Oct 2020 07:24:04: 46000000 INFO @ Fri, 16 Oct 2020 07:24:07: 51000000 INFO @ Fri, 16 Oct 2020 07:24:11: 47000000 INFO @ Fri, 16 Oct 2020 07:24:14: 36000000 INFO @ Fri, 16 Oct 2020 07:24:15: 52000000 INFO @ Fri, 16 Oct 2020 07:24:19: 48000000 INFO @ Fri, 16 Oct 2020 07:24:22: 37000000 INFO @ Fri, 16 Oct 2020 07:24:22: 53000000 INFO @ Fri, 16 Oct 2020 07:24:26: 49000000 INFO @ Fri, 16 Oct 2020 07:24:30: 54000000 INFO @ Fri, 16 Oct 2020 07:24:30: 38000000 INFO @ Fri, 16 Oct 2020 07:24:34: 50000000 INFO @ Fri, 16 Oct 2020 07:24:38: 55000000 INFO @ Fri, 16 Oct 2020 07:24:39: 39000000 INFO @ Fri, 16 Oct 2020 07:24:41: 51000000 INFO @ Fri, 16 Oct 2020 07:24:45: 56000000 INFO @ Fri, 16 Oct 2020 07:24:46: 40000000 INFO @ Fri, 16 Oct 2020 07:24:49: 52000000 INFO @ Fri, 16 Oct 2020 07:24:53: 57000000 INFO @ Fri, 16 Oct 2020 07:24:54: 41000000 INFO @ Fri, 16 Oct 2020 07:24:57: 53000000 INFO @ Fri, 16 Oct 2020 07:25:00: 58000000 INFO @ Fri, 16 Oct 2020 07:25:02: 42000000 INFO @ Fri, 16 Oct 2020 07:25:04: 54000000 INFO @ Fri, 16 Oct 2020 07:25:08: 59000000 INFO @ Fri, 16 Oct 2020 07:25:09: 43000000 INFO @ Fri, 16 Oct 2020 07:25:12: 55000000 INFO @ Fri, 16 Oct 2020 07:25:16: 60000000 INFO @ Fri, 16 Oct 2020 07:25:17: 44000000 INFO @ Fri, 16 Oct 2020 07:25:19: 56000000 INFO @ Fri, 16 Oct 2020 07:25:23: 61000000 INFO @ Fri, 16 Oct 2020 07:25:25: 45000000 INFO @ Fri, 16 Oct 2020 07:25:27: 57000000 INFO @ Fri, 16 Oct 2020 07:25:31: 62000000 INFO @ Fri, 16 Oct 2020 07:25:33: 46000000 INFO @ Fri, 16 Oct 2020 07:25:34: 58000000 INFO @ Fri, 16 Oct 2020 07:25:38: 63000000 INFO @ Fri, 16 Oct 2020 07:25:40: 47000000 INFO @ Fri, 16 Oct 2020 07:25:42: 59000000 INFO @ Fri, 16 Oct 2020 07:25:46: 64000000 INFO @ Fri, 16 Oct 2020 07:25:48: 48000000 INFO @ Fri, 16 Oct 2020 07:25:49: 60000000 INFO @ Fri, 16 Oct 2020 07:25:53: 65000000 INFO @ Fri, 16 Oct 2020 07:25:56: 49000000 INFO @ Fri, 16 Oct 2020 07:25:57: 61000000 INFO @ Fri, 16 Oct 2020 07:26:01: 66000000 INFO @ Fri, 16 Oct 2020 07:26:04: 50000000 INFO @ Fri, 16 Oct 2020 07:26:04: 62000000 INFO @ Fri, 16 Oct 2020 07:26:08: 67000000 INFO @ Fri, 16 Oct 2020 07:26:12: 51000000 INFO @ Fri, 16 Oct 2020 07:26:12: 63000000 INFO @ Fri, 16 Oct 2020 07:26:16: 68000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 16 Oct 2020 07:26:20: 52000000 INFO @ Fri, 16 Oct 2020 07:26:20: 64000000 INFO @ Fri, 16 Oct 2020 07:26:23: 69000000 INFO @ Fri, 16 Oct 2020 07:26:27: 65000000 INFO @ Fri, 16 Oct 2020 07:26:27: 53000000 INFO @ Fri, 16 Oct 2020 07:26:31: 70000000 INFO @ Fri, 16 Oct 2020 07:26:35: 66000000 INFO @ Fri, 16 Oct 2020 07:26:35: 54000000 INFO @ Fri, 16 Oct 2020 07:26:39: 71000000 INFO @ Fri, 16 Oct 2020 07:26:42: 67000000 INFO @ Fri, 16 Oct 2020 07:26:43: 55000000 INFO @ Fri, 16 Oct 2020 07:26:46: 72000000 INFO @ Fri, 16 Oct 2020 07:26:50: 68000000 INFO @ Fri, 16 Oct 2020 07:26:50: 56000000 INFO @ Fri, 16 Oct 2020 07:26:54: 73000000 INFO @ Fri, 16 Oct 2020 07:26:57: 69000000 INFO @ Fri, 16 Oct 2020 07:26:58: 57000000 INFO @ Fri, 16 Oct 2020 07:27:01: 74000000 INFO @ Fri, 16 Oct 2020 07:27:05: 70000000 INFO @ Fri, 16 Oct 2020 07:27:06: 58000000 INFO @ Fri, 16 Oct 2020 07:27:09: 75000000 INFO @ Fri, 16 Oct 2020 07:27:12: 71000000 INFO @ Fri, 16 Oct 2020 07:27:15: 59000000 INFO @ Fri, 16 Oct 2020 07:27:16: 76000000 INFO @ Fri, 16 Oct 2020 07:27:20: 72000000 INFO @ Fri, 16 Oct 2020 07:27:23: 60000000 INFO @ Fri, 16 Oct 2020 07:27:24: 77000000 INFO @ Fri, 16 Oct 2020 07:27:28: 73000000 INFO @ Fri, 16 Oct 2020 07:27:31: 61000000 INFO @ Fri, 16 Oct 2020 07:27:31: 78000000 INFO @ Fri, 16 Oct 2020 07:27:35: 74000000 INFO @ Fri, 16 Oct 2020 07:27:39: 62000000 INFO @ Fri, 16 Oct 2020 07:27:39: 79000000 INFO @ Fri, 16 Oct 2020 07:27:43: 75000000 INFO @ Fri, 16 Oct 2020 07:27:46: 63000000 INFO @ Fri, 16 Oct 2020 07:27:46: 80000000 INFO @ Fri, 16 Oct 2020 07:27:50: 76000000 INFO @ Fri, 16 Oct 2020 07:27:54: 81000000 INFO @ Fri, 16 Oct 2020 07:27:54: 64000000 INFO @ Fri, 16 Oct 2020 07:27:58: 77000000 INFO @ Fri, 16 Oct 2020 07:28:02: 82000000 INFO @ Fri, 16 Oct 2020 07:28:02: 65000000 INFO @ Fri, 16 Oct 2020 07:28:05: 78000000 INFO @ Fri, 16 Oct 2020 07:28:09: 83000000 INFO @ Fri, 16 Oct 2020 07:28:10: 66000000 INFO @ Fri, 16 Oct 2020 07:28:13: 79000000 INFO @ Fri, 16 Oct 2020 07:28:17: 84000000 INFO @ Fri, 16 Oct 2020 07:28:17: 67000000 INFO @ Fri, 16 Oct 2020 07:28:21: 80000000 INFO @ Fri, 16 Oct 2020 07:28:24: 85000000 INFO @ Fri, 16 Oct 2020 07:28:25: 68000000 INFO @ Fri, 16 Oct 2020 07:28:28: 81000000 INFO @ Fri, 16 Oct 2020 07:28:32: 86000000 INFO @ Fri, 16 Oct 2020 07:28:33: 69000000 INFO @ Fri, 16 Oct 2020 07:28:36: 82000000 INFO @ Fri, 16 Oct 2020 07:28:39: 87000000 INFO @ Fri, 16 Oct 2020 07:28:41: 70000000 INFO @ Fri, 16 Oct 2020 07:28:43: 83000000 INFO @ Fri, 16 Oct 2020 07:28:47: 88000000 INFO @ Fri, 16 Oct 2020 07:28:48: 71000000 INFO @ Fri, 16 Oct 2020 07:28:51: 84000000 INFO @ Fri, 16 Oct 2020 07:28:55: 89000000 INFO @ Fri, 16 Oct 2020 07:28:56: 72000000 INFO @ Fri, 16 Oct 2020 07:28:58: 85000000 INFO @ Fri, 16 Oct 2020 07:29:02: 90000000 INFO @ Fri, 16 Oct 2020 07:29:04: 73000000 INFO @ Fri, 16 Oct 2020 07:29:06: 86000000 INFO @ Fri, 16 Oct 2020 07:29:10: 91000000 INFO @ Fri, 16 Oct 2020 07:29:12: 74000000 INFO @ Fri, 16 Oct 2020 07:29:13: 87000000 INFO @ Fri, 16 Oct 2020 07:29:17: 92000000 INFO @ Fri, 16 Oct 2020 07:29:19: 75000000 INFO @ Fri, 16 Oct 2020 07:29:21: 88000000 INFO @ Fri, 16 Oct 2020 07:29:25: 93000000 INFO @ Fri, 16 Oct 2020 07:29:27: 76000000 INFO @ Fri, 16 Oct 2020 07:29:28: 89000000 INFO @ Fri, 16 Oct 2020 07:29:33: 94000000 INFO @ Fri, 16 Oct 2020 07:29:35: 77000000 INFO @ Fri, 16 Oct 2020 07:29:36: 90000000 INFO @ Fri, 16 Oct 2020 07:29:40: 95000000 INFO @ Fri, 16 Oct 2020 07:29:43: 78000000 INFO @ Fri, 16 Oct 2020 07:29:43: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 07:29:43: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 07:29:43: #1 total tags in treatment: 95311226 INFO @ Fri, 16 Oct 2020 07:29:43: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 07:29:43: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 07:29:44: 91000000 INFO @ Fri, 16 Oct 2020 07:29:45: #1 tags after filtering in treatment: 95311213 INFO @ Fri, 16 Oct 2020 07:29:45: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 07:29:45: #1 finished! INFO @ Fri, 16 Oct 2020 07:29:45: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 07:29:45: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 07:29:50: 79000000 INFO @ Fri, 16 Oct 2020 07:29:51: 92000000 INFO @ Fri, 16 Oct 2020 07:29:52: #2 number of paired peaks: 6584 INFO @ Fri, 16 Oct 2020 07:29:52: start model_add_line... INFO @ Fri, 16 Oct 2020 07:29:52: start X-correlation... INFO @ Fri, 16 Oct 2020 07:29:53: end of X-cor INFO @ Fri, 16 Oct 2020 07:29:53: #2 finished! INFO @ Fri, 16 Oct 2020 07:29:53: #2 predicted fragment length is 50 bps INFO @ Fri, 16 Oct 2020 07:29:53: #2 alternative fragment length(s) may be 50 bps INFO @ Fri, 16 Oct 2020 07:29:53: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.05_model.r WARNING @ Fri, 16 Oct 2020 07:29:53: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 16 Oct 2020 07:29:53: #2 You may need to consider one of the other alternative d(s): 50 WARNING @ Fri, 16 Oct 2020 07:29:53: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 16 Oct 2020 07:29:53: #3 Call peaks... INFO @ Fri, 16 Oct 2020 07:29:53: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 16 Oct 2020 07:29:58: 93000000 INFO @ Fri, 16 Oct 2020 07:29:58: 80000000 INFO @ Fri, 16 Oct 2020 07:30:05: 94000000 INFO @ Fri, 16 Oct 2020 07:30:06: 81000000 BigWig に変換しました。 INFO @ Fri, 16 Oct 2020 07:30:13: 95000000 INFO @ Fri, 16 Oct 2020 07:30:14: 82000000 INFO @ Fri, 16 Oct 2020 07:30:15: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 07:30:15: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 07:30:15: #1 total tags in treatment: 95311226 INFO @ Fri, 16 Oct 2020 07:30:15: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 07:30:15: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 07:30:17: #1 tags after filtering in treatment: 95311213 INFO @ Fri, 16 Oct 2020 07:30:17: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 07:30:17: #1 finished! INFO @ Fri, 16 Oct 2020 07:30:17: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 07:30:17: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 07:30:21: 83000000 INFO @ Fri, 16 Oct 2020 07:30:24: #2 number of paired peaks: 6584 INFO @ Fri, 16 Oct 2020 07:30:24: start model_add_line... INFO @ Fri, 16 Oct 2020 07:30:25: start X-correlation... INFO @ Fri, 16 Oct 2020 07:30:25: end of X-cor INFO @ Fri, 16 Oct 2020 07:30:25: #2 finished! INFO @ Fri, 16 Oct 2020 07:30:25: #2 predicted fragment length is 50 bps INFO @ Fri, 16 Oct 2020 07:30:25: #2 alternative fragment length(s) may be 50 bps INFO @ Fri, 16 Oct 2020 07:30:25: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.10_model.r WARNING @ Fri, 16 Oct 2020 07:30:25: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 16 Oct 2020 07:30:25: #2 You may need to consider one of the other alternative d(s): 50 WARNING @ Fri, 16 Oct 2020 07:30:25: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 16 Oct 2020 07:30:25: #3 Call peaks... INFO @ Fri, 16 Oct 2020 07:30:25: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 16 Oct 2020 07:30:29: 84000000 INFO @ Fri, 16 Oct 2020 07:30:36: 85000000 INFO @ Fri, 16 Oct 2020 07:30:43: 86000000 INFO @ Fri, 16 Oct 2020 07:30:50: 87000000 INFO @ Fri, 16 Oct 2020 07:30:57: 88000000 INFO @ Fri, 16 Oct 2020 07:31:04: 89000000 INFO @ Fri, 16 Oct 2020 07:31:11: 90000000 INFO @ Fri, 16 Oct 2020 07:31:18: 91000000 INFO @ Fri, 16 Oct 2020 07:31:26: 92000000 INFO @ Fri, 16 Oct 2020 07:31:33: 93000000 INFO @ Fri, 16 Oct 2020 07:31:40: 94000000 INFO @ Fri, 16 Oct 2020 07:31:47: 95000000 INFO @ Fri, 16 Oct 2020 07:31:50: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 07:31:50: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 07:31:50: #1 total tags in treatment: 95311226 INFO @ Fri, 16 Oct 2020 07:31:50: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 07:31:50: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 07:31:52: #1 tags after filtering in treatment: 95311213 INFO @ Fri, 16 Oct 2020 07:31:52: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 07:31:52: #1 finished! INFO @ Fri, 16 Oct 2020 07:31:52: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 07:31:52: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 07:31:59: #2 number of paired peaks: 6584 INFO @ Fri, 16 Oct 2020 07:31:59: start model_add_line... INFO @ Fri, 16 Oct 2020 07:32:00: start X-correlation... INFO @ Fri, 16 Oct 2020 07:32:00: end of X-cor INFO @ Fri, 16 Oct 2020 07:32:00: #2 finished! INFO @ Fri, 16 Oct 2020 07:32:00: #2 predicted fragment length is 50 bps INFO @ Fri, 16 Oct 2020 07:32:00: #2 alternative fragment length(s) may be 50 bps INFO @ Fri, 16 Oct 2020 07:32:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.20_model.r WARNING @ Fri, 16 Oct 2020 07:32:00: #2 Since the d (50) calculated from paired-peaks are smaller than 2*tag length, it may be influenced by unknown sequencing problem! WARNING @ Fri, 16 Oct 2020 07:32:00: #2 You may need to consider one of the other alternative d(s): 50 WARNING @ Fri, 16 Oct 2020 07:32:00: #2 You can restart the process with --nomodel --extsize XXX with your choice or an arbitrary number. Nontheless, MACS will continute computing. INFO @ Fri, 16 Oct 2020 07:32:00: #3 Call peaks... INFO @ Fri, 16 Oct 2020 07:32:00: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 16 Oct 2020 07:33:26: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 07:33:52: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 07:35:12: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.05_peaks.xls INFO @ Fri, 16 Oct 2020 07:35:13: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.05_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 07:35:13: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.05_summits.bed INFO @ Fri, 16 Oct 2020 07:35:13: Done! pass1 - making usageList (92 chroms): 2 millis pass2 - checking and writing primary data (4740 records, 4 fields): 21 millis CompletedMACS2peakCalling INFO @ Fri, 16 Oct 2020 07:35:32: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 07:35:42: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.10_peaks.xls INFO @ Fri, 16 Oct 2020 07:35:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.10_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 07:35:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.10_summits.bed INFO @ Fri, 16 Oct 2020 07:35:42: Done! pass1 - making usageList (66 chroms): 1 millis pass2 - checking and writing primary data (2294 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Fri, 16 Oct 2020 07:37:17: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.20_peaks.xls INFO @ Fri, 16 Oct 2020 07:37:17: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.20_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 07:37:17: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745136/ERX2745136.20_summits.bed INFO @ Fri, 16 Oct 2020 07:37:17: Done! pass1 - making usageList (50 chroms): 1 millis pass2 - checking and writing primary data (921 records, 4 fields): 4 millis CompletedMACS2peakCalling