Job ID = 10223638 SRX = ERX2745119 Genome = rn6 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2020-10-15T19:42:04 prefetch.2.10.7: 1) Downloading 'ERR2731894'... 2020-10-15T19:42:05 prefetch.2.10.7: Downloading via HTTPS... 2020-10-15T19:45:50 prefetch.2.10.7: HTTPS download succeed 2020-10-15T19:45:50 prefetch.2.10.7: 1) 'ERR2731894' was downloaded successfully Read 131295661 spots for ERR2731894/ERR2731894.sra Written 131295661 spots for ERR2731894/ERR2731894.sra fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:03 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:27:43 131295661 reads; of these: 131295661 (100.00%) were unpaired; of these: 3148758 (2.40%) aligned 0 times 108279362 (82.47%) aligned exactly 1 time 19867541 (15.13%) aligned >1 times 97.60% overall alignment rate Time searching: 01:27:48 Overall time: 01:27:48 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 56 files... [bam_rmdupse_core] 37072187 / 128146903 = 0.2893 in library ' ' BAM に変換しました。 Bed ファイルを作成中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 06:41:00: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 06:41:00: #1 read tag files... INFO @ Fri, 16 Oct 2020 06:41:00: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 06:41:05: 1000000 INFO @ Fri, 16 Oct 2020 06:41:11: 2000000 INFO @ Fri, 16 Oct 2020 06:41:16: 3000000 INFO @ Fri, 16 Oct 2020 06:41:21: 4000000 WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 06:41:24: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 06:41:24: #1 read tag files... INFO @ Fri, 16 Oct 2020 06:41:24: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 06:41:26: 5000000 INFO @ Fri, 16 Oct 2020 06:41:29: 1000000 INFO @ Fri, 16 Oct 2020 06:41:32: 6000000 INFO @ Fri, 16 Oct 2020 06:41:35: 2000000 INFO @ Fri, 16 Oct 2020 06:41:37: 7000000 INFO @ Fri, 16 Oct 2020 06:41:40: 3000000 INFO @ Fri, 16 Oct 2020 06:41:43: 8000000 INFO @ Fri, 16 Oct 2020 06:41:46: 4000000 INFO @ Fri, 16 Oct 2020 06:41:48: 9000000 INFO @ Fri, 16 Oct 2020 06:41:51: 5000000 BedGraph に変換中... WARNING: Skipping mount /opt/pkg/singularity/3.5.2/var/singularity/mnt/session/etc/resolv.conf [files]: /etc/resolv.conf doesn't exist in container INFO @ Fri, 16 Oct 2020 06:41:54: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 16 Oct 2020 06:41:54: #1 read tag files... INFO @ Fri, 16 Oct 2020 06:41:54: #1 read treatment tags... INFO @ Fri, 16 Oct 2020 06:41:54: 10000000 INFO @ Fri, 16 Oct 2020 06:41:57: 6000000 INFO @ Fri, 16 Oct 2020 06:41:59: 1000000 INFO @ Fri, 16 Oct 2020 06:41:59: 11000000 INFO @ Fri, 16 Oct 2020 06:42:03: 7000000 INFO @ Fri, 16 Oct 2020 06:42:05: 12000000 INFO @ Fri, 16 Oct 2020 06:42:05: 2000000 INFO @ Fri, 16 Oct 2020 06:42:08: 8000000 INFO @ Fri, 16 Oct 2020 06:42:10: 13000000 INFO @ Fri, 16 Oct 2020 06:42:10: 3000000 INFO @ Fri, 16 Oct 2020 06:42:14: 9000000 INFO @ Fri, 16 Oct 2020 06:42:16: 14000000 INFO @ Fri, 16 Oct 2020 06:42:16: 4000000 INFO @ Fri, 16 Oct 2020 06:42:19: 10000000 INFO @ Fri, 16 Oct 2020 06:42:21: 15000000 INFO @ Fri, 16 Oct 2020 06:42:22: 5000000 INFO @ Fri, 16 Oct 2020 06:42:25: 11000000 INFO @ Fri, 16 Oct 2020 06:42:27: 16000000 INFO @ Fri, 16 Oct 2020 06:42:27: 6000000 INFO @ Fri, 16 Oct 2020 06:42:30: 12000000 INFO @ Fri, 16 Oct 2020 06:42:32: 17000000 INFO @ Fri, 16 Oct 2020 06:42:33: 7000000 INFO @ Fri, 16 Oct 2020 06:42:36: 13000000 INFO @ Fri, 16 Oct 2020 06:42:38: 18000000 INFO @ Fri, 16 Oct 2020 06:42:38: 8000000 INFO @ Fri, 16 Oct 2020 06:42:41: 14000000 INFO @ Fri, 16 Oct 2020 06:42:44: 19000000 INFO @ Fri, 16 Oct 2020 06:42:44: 9000000 INFO @ Fri, 16 Oct 2020 06:42:47: 15000000 INFO @ Fri, 16 Oct 2020 06:42:49: 20000000 INFO @ Fri, 16 Oct 2020 06:42:49: 10000000 INFO @ Fri, 16 Oct 2020 06:42:52: 16000000 INFO @ Fri, 16 Oct 2020 06:42:55: 21000000 INFO @ Fri, 16 Oct 2020 06:42:55: 11000000 INFO @ Fri, 16 Oct 2020 06:42:58: 17000000 INFO @ Fri, 16 Oct 2020 06:43:00: 22000000 INFO @ Fri, 16 Oct 2020 06:43:00: 12000000 INFO @ Fri, 16 Oct 2020 06:43:03: 18000000 INFO @ Fri, 16 Oct 2020 06:43:06: 23000000 INFO @ Fri, 16 Oct 2020 06:43:06: 13000000 INFO @ Fri, 16 Oct 2020 06:43:09: 19000000 INFO @ Fri, 16 Oct 2020 06:43:11: 14000000 INFO @ Fri, 16 Oct 2020 06:43:11: 24000000 INFO @ Fri, 16 Oct 2020 06:43:14: 20000000 INFO @ Fri, 16 Oct 2020 06:43:17: 15000000 INFO @ Fri, 16 Oct 2020 06:43:17: 25000000 INFO @ Fri, 16 Oct 2020 06:43:19: 21000000 INFO @ Fri, 16 Oct 2020 06:43:22: 16000000 INFO @ Fri, 16 Oct 2020 06:43:22: 26000000 INFO @ Fri, 16 Oct 2020 06:43:25: 22000000 INFO @ Fri, 16 Oct 2020 06:43:28: 17000000 INFO @ Fri, 16 Oct 2020 06:43:28: 27000000 INFO @ Fri, 16 Oct 2020 06:43:31: 23000000 INFO @ Fri, 16 Oct 2020 06:43:34: 18000000 INFO @ Fri, 16 Oct 2020 06:43:34: 28000000 INFO @ Fri, 16 Oct 2020 06:43:37: 24000000 INFO @ Fri, 16 Oct 2020 06:43:39: 29000000 INFO @ Fri, 16 Oct 2020 06:43:40: 19000000 INFO @ Fri, 16 Oct 2020 06:43:43: 25000000 INFO @ Fri, 16 Oct 2020 06:43:46: 30000000 INFO @ Fri, 16 Oct 2020 06:43:46: 20000000 INFO @ Fri, 16 Oct 2020 06:43:49: 26000000 INFO @ Fri, 16 Oct 2020 06:43:52: 21000000 INFO @ Fri, 16 Oct 2020 06:43:52: 31000000 INFO @ Fri, 16 Oct 2020 06:43:55: 27000000 INFO @ Fri, 16 Oct 2020 06:43:58: 32000000 INFO @ Fri, 16 Oct 2020 06:43:58: 22000000 INFO @ Fri, 16 Oct 2020 06:44:00: 28000000 INFO @ Fri, 16 Oct 2020 06:44:03: 33000000 INFO @ Fri, 16 Oct 2020 06:44:04: 23000000 INFO @ Fri, 16 Oct 2020 06:44:06: 29000000 INFO @ Fri, 16 Oct 2020 06:44:10: 34000000 INFO @ Fri, 16 Oct 2020 06:44:10: 24000000 INFO @ Fri, 16 Oct 2020 06:44:12: 30000000 INFO @ Fri, 16 Oct 2020 06:44:16: 25000000 INFO @ Fri, 16 Oct 2020 06:44:16: 35000000 INFO @ Fri, 16 Oct 2020 06:44:18: 31000000 INFO @ Fri, 16 Oct 2020 06:44:22: 26000000 INFO @ Fri, 16 Oct 2020 06:44:22: 36000000 INFO @ Fri, 16 Oct 2020 06:44:24: 32000000 INFO @ Fri, 16 Oct 2020 06:44:27: 27000000 INFO @ Fri, 16 Oct 2020 06:44:28: 37000000 INFO @ Fri, 16 Oct 2020 06:44:30: 33000000 INFO @ Fri, 16 Oct 2020 06:44:33: 28000000 INFO @ Fri, 16 Oct 2020 06:44:35: 38000000 INFO @ Fri, 16 Oct 2020 06:44:36: 34000000 INFO @ Fri, 16 Oct 2020 06:44:39: 29000000 INFO @ Fri, 16 Oct 2020 06:44:41: 39000000 INFO @ Fri, 16 Oct 2020 06:44:42: 35000000 INFO @ Fri, 16 Oct 2020 06:44:44: 30000000 INFO @ Fri, 16 Oct 2020 06:44:47: 40000000 INFO @ Fri, 16 Oct 2020 06:44:49: 36000000 INFO @ Fri, 16 Oct 2020 06:44:50: 31000000 INFO @ Fri, 16 Oct 2020 06:44:53: 41000000 INFO @ Fri, 16 Oct 2020 06:44:55: 37000000 INFO @ Fri, 16 Oct 2020 06:44:56: 32000000 INFO @ Fri, 16 Oct 2020 06:44:59: 42000000 INFO @ Fri, 16 Oct 2020 06:45:00: 38000000 INFO @ Fri, 16 Oct 2020 06:45:02: 33000000 INFO @ Fri, 16 Oct 2020 06:45:05: 43000000 INFO @ Fri, 16 Oct 2020 06:45:06: 39000000 INFO @ Fri, 16 Oct 2020 06:45:07: 34000000 INFO @ Fri, 16 Oct 2020 06:45:11: 44000000 INFO @ Fri, 16 Oct 2020 06:45:12: 40000000 INFO @ Fri, 16 Oct 2020 06:45:13: 35000000 INFO @ Fri, 16 Oct 2020 06:45:16: 45000000 INFO @ Fri, 16 Oct 2020 06:45:18: 41000000 INFO @ Fri, 16 Oct 2020 06:45:19: 36000000 INFO @ Fri, 16 Oct 2020 06:45:22: 46000000 INFO @ Fri, 16 Oct 2020 06:45:24: 42000000 INFO @ Fri, 16 Oct 2020 06:45:25: 37000000 INFO @ Fri, 16 Oct 2020 06:45:28: 47000000 INFO @ Fri, 16 Oct 2020 06:45:30: 43000000 INFO @ Fri, 16 Oct 2020 06:45:30: 38000000 INFO @ Fri, 16 Oct 2020 06:45:33: 48000000 INFO @ Fri, 16 Oct 2020 06:45:35: 44000000 INFO @ Fri, 16 Oct 2020 06:45:36: 39000000 INFO @ Fri, 16 Oct 2020 06:45:39: 49000000 INFO @ Fri, 16 Oct 2020 06:45:41: 45000000 INFO @ Fri, 16 Oct 2020 06:45:42: 40000000 INFO @ Fri, 16 Oct 2020 06:45:45: 50000000 INFO @ Fri, 16 Oct 2020 06:45:47: 46000000 INFO @ Fri, 16 Oct 2020 06:45:47: 41000000 INFO @ Fri, 16 Oct 2020 06:45:50: 51000000 INFO @ Fri, 16 Oct 2020 06:45:52: 47000000 INFO @ Fri, 16 Oct 2020 06:45:53: 42000000 INFO @ Fri, 16 Oct 2020 06:45:56: 52000000 INFO @ Fri, 16 Oct 2020 06:45:58: 48000000 INFO @ Fri, 16 Oct 2020 06:45:59: 43000000 INFO @ Fri, 16 Oct 2020 06:46:02: 53000000 INFO @ Fri, 16 Oct 2020 06:46:04: 49000000 INFO @ Fri, 16 Oct 2020 06:46:05: 44000000 INFO @ Fri, 16 Oct 2020 06:46:08: 54000000 INFO @ Fri, 16 Oct 2020 06:46:10: 50000000 INFO @ Fri, 16 Oct 2020 06:46:10: 45000000 INFO @ Fri, 16 Oct 2020 06:46:14: 55000000 INFO @ Fri, 16 Oct 2020 06:46:15: 51000000 INFO @ Fri, 16 Oct 2020 06:46:16: 46000000 INFO @ Fri, 16 Oct 2020 06:46:20: 56000000 INFO @ Fri, 16 Oct 2020 06:46:21: 52000000 INFO @ Fri, 16 Oct 2020 06:46:22: 47000000 INFO @ Fri, 16 Oct 2020 06:46:26: 57000000 INFO @ Fri, 16 Oct 2020 06:46:27: 53000000 INFO @ Fri, 16 Oct 2020 06:46:28: 48000000 INFO @ Fri, 16 Oct 2020 06:46:32: 58000000 INFO @ Fri, 16 Oct 2020 06:46:32: 54000000 INFO @ Fri, 16 Oct 2020 06:46:34: 49000000 INFO @ Fri, 16 Oct 2020 06:46:38: 59000000 INFO @ Fri, 16 Oct 2020 06:46:38: 55000000 INFO @ Fri, 16 Oct 2020 06:46:40: 50000000 INFO @ Fri, 16 Oct 2020 06:46:43: 60000000 INFO @ Fri, 16 Oct 2020 06:46:44: 56000000 INFO @ Fri, 16 Oct 2020 06:46:45: 51000000 INFO @ Fri, 16 Oct 2020 06:46:49: 61000000 INFO @ Fri, 16 Oct 2020 06:46:50: 57000000 INFO @ Fri, 16 Oct 2020 06:46:51: 52000000 INFO @ Fri, 16 Oct 2020 06:46:55: 62000000 INFO @ Fri, 16 Oct 2020 06:46:55: 58000000 INFO @ Fri, 16 Oct 2020 06:46:57: 53000000 INFO @ Fri, 16 Oct 2020 06:47:00: 63000000 INFO @ Fri, 16 Oct 2020 06:47:01: 59000000 INFO @ Fri, 16 Oct 2020 06:47:03: 54000000 INFO @ Fri, 16 Oct 2020 06:47:06: 64000000 INFO @ Fri, 16 Oct 2020 06:47:07: 60000000 INFO @ Fri, 16 Oct 2020 06:47:09: 55000000 INFO @ Fri, 16 Oct 2020 06:47:12: 65000000 INFO @ Fri, 16 Oct 2020 06:47:12: 61000000 INFO @ Fri, 16 Oct 2020 06:47:15: 56000000 INFO @ Fri, 16 Oct 2020 06:47:18: 66000000 INFO @ Fri, 16 Oct 2020 06:47:18: 62000000 INFO @ Fri, 16 Oct 2020 06:47:20: 57000000 INFO @ Fri, 16 Oct 2020 06:47:24: 67000000 INFO @ Fri, 16 Oct 2020 06:47:24: 63000000 INFO @ Fri, 16 Oct 2020 06:47:26: 58000000 INFO @ Fri, 16 Oct 2020 06:47:29: 68000000 INFO @ Fri, 16 Oct 2020 06:47:29: 64000000 INFO @ Fri, 16 Oct 2020 06:47:32: 59000000 INFO @ Fri, 16 Oct 2020 06:47:35: 65000000 INFO @ Fri, 16 Oct 2020 06:47:35: 69000000 INFO @ Fri, 16 Oct 2020 06:47:38: 60000000 INFO @ Fri, 16 Oct 2020 06:47:41: 70000000 INFO @ Fri, 16 Oct 2020 06:47:41: 66000000 INFO @ Fri, 16 Oct 2020 06:47:43: 61000000 INFO @ Fri, 16 Oct 2020 06:47:47: 71000000 INFO @ Fri, 16 Oct 2020 06:47:47: 67000000 INFO @ Fri, 16 Oct 2020 06:47:49: 62000000 INFO @ Fri, 16 Oct 2020 06:47:53: 72000000 INFO @ Fri, 16 Oct 2020 06:47:53: 68000000 INFO @ Fri, 16 Oct 2020 06:47:55: 63000000 INFO @ Fri, 16 Oct 2020 06:47:59: 73000000 INFO @ Fri, 16 Oct 2020 06:47:59: 69000000 INFO @ Fri, 16 Oct 2020 06:48:01: 64000000 INFO @ Fri, 16 Oct 2020 06:48:05: 70000000 INFO @ Fri, 16 Oct 2020 06:48:05: 74000000 INFO @ Fri, 16 Oct 2020 06:48:06: 65000000 INFO @ Fri, 16 Oct 2020 06:48:11: 71000000 INFO @ Fri, 16 Oct 2020 06:48:11: 75000000 INFO @ Fri, 16 Oct 2020 06:48:12: 66000000 INFO @ Fri, 16 Oct 2020 06:48:16: 72000000 INFO @ Fri, 16 Oct 2020 06:48:17: 76000000 INFO @ Fri, 16 Oct 2020 06:48:18: 67000000 INFO @ Fri, 16 Oct 2020 06:48:22: 73000000 INFO @ Fri, 16 Oct 2020 06:48:23: 77000000 INFO @ Fri, 16 Oct 2020 06:48:24: 68000000 INFO @ Fri, 16 Oct 2020 06:48:28: 74000000 INFO @ Fri, 16 Oct 2020 06:48:29: 78000000 INFO @ Fri, 16 Oct 2020 06:48:29: 69000000 INFO @ Fri, 16 Oct 2020 06:48:34: 75000000 INFO @ Fri, 16 Oct 2020 06:48:35: 79000000 INFO @ Fri, 16 Oct 2020 06:48:35: 70000000 BedGraph に変換しました。 BigWig に変換中... INFO @ Fri, 16 Oct 2020 06:48:40: 76000000 INFO @ Fri, 16 Oct 2020 06:48:41: 80000000 INFO @ Fri, 16 Oct 2020 06:48:41: 71000000 INFO @ Fri, 16 Oct 2020 06:48:45: 77000000 INFO @ Fri, 16 Oct 2020 06:48:47: 81000000 INFO @ Fri, 16 Oct 2020 06:48:47: 72000000 INFO @ Fri, 16 Oct 2020 06:48:51: 78000000 INFO @ Fri, 16 Oct 2020 06:48:52: 82000000 INFO @ Fri, 16 Oct 2020 06:48:52: 73000000 INFO @ Fri, 16 Oct 2020 06:48:57: 79000000 INFO @ Fri, 16 Oct 2020 06:48:58: 83000000 INFO @ Fri, 16 Oct 2020 06:48:58: 74000000 INFO @ Fri, 16 Oct 2020 06:49:02: 80000000 INFO @ Fri, 16 Oct 2020 06:49:04: 84000000 INFO @ Fri, 16 Oct 2020 06:49:04: 75000000 INFO @ Fri, 16 Oct 2020 06:49:08: 81000000 INFO @ Fri, 16 Oct 2020 06:49:09: 85000000 INFO @ Fri, 16 Oct 2020 06:49:10: 76000000 INFO @ Fri, 16 Oct 2020 06:49:14: 82000000 INFO @ Fri, 16 Oct 2020 06:49:15: 86000000 INFO @ Fri, 16 Oct 2020 06:49:15: 77000000 INFO @ Fri, 16 Oct 2020 06:49:19: 83000000 INFO @ Fri, 16 Oct 2020 06:49:21: 87000000 INFO @ Fri, 16 Oct 2020 06:49:21: 78000000 INFO @ Fri, 16 Oct 2020 06:49:25: 84000000 INFO @ Fri, 16 Oct 2020 06:49:27: 79000000 INFO @ Fri, 16 Oct 2020 06:49:27: 88000000 INFO @ Fri, 16 Oct 2020 06:49:31: 85000000 INFO @ Fri, 16 Oct 2020 06:49:33: 80000000 INFO @ Fri, 16 Oct 2020 06:49:33: 89000000 INFO @ Fri, 16 Oct 2020 06:49:37: 86000000 INFO @ Fri, 16 Oct 2020 06:49:38: 81000000 INFO @ Fri, 16 Oct 2020 06:49:39: 90000000 INFO @ Fri, 16 Oct 2020 06:49:42: 87000000 INFO @ Fri, 16 Oct 2020 06:49:44: 82000000 INFO @ Fri, 16 Oct 2020 06:49:46: 91000000 INFO @ Fri, 16 Oct 2020 06:49:47: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 06:49:47: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 06:49:47: #1 total tags in treatment: 91074716 INFO @ Fri, 16 Oct 2020 06:49:47: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 06:49:47: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 06:49:48: 88000000 INFO @ Fri, 16 Oct 2020 06:49:49: #1 tags after filtering in treatment: 91074651 INFO @ Fri, 16 Oct 2020 06:49:49: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 06:49:49: #1 finished! INFO @ Fri, 16 Oct 2020 06:49:49: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 06:49:49: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 06:49:50: 83000000 INFO @ Fri, 16 Oct 2020 06:49:54: 89000000 INFO @ Fri, 16 Oct 2020 06:49:56: 84000000 INFO @ Fri, 16 Oct 2020 06:49:59: #2 number of paired peaks: 92262 INFO @ Fri, 16 Oct 2020 06:49:59: start model_add_line... INFO @ Fri, 16 Oct 2020 06:50:00: 90000000 INFO @ Fri, 16 Oct 2020 06:50:00: start X-correlation... INFO @ Fri, 16 Oct 2020 06:50:00: end of X-cor INFO @ Fri, 16 Oct 2020 06:50:00: #2 finished! INFO @ Fri, 16 Oct 2020 06:50:00: #2 predicted fragment length is 245 bps INFO @ Fri, 16 Oct 2020 06:50:00: #2 alternative fragment length(s) may be 3,245 bps INFO @ Fri, 16 Oct 2020 06:50:00: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.05_model.r INFO @ Fri, 16 Oct 2020 06:50:00: #3 Call peaks... INFO @ Fri, 16 Oct 2020 06:50:00: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 16 Oct 2020 06:50:01: 85000000 INFO @ Fri, 16 Oct 2020 06:50:06: 91000000 INFO @ Fri, 16 Oct 2020 06:50:07: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 06:50:07: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 06:50:07: #1 total tags in treatment: 91074716 INFO @ Fri, 16 Oct 2020 06:50:07: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 06:50:07: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 06:50:07: 86000000 INFO @ Fri, 16 Oct 2020 06:50:08: #1 tags after filtering in treatment: 91074651 INFO @ Fri, 16 Oct 2020 06:50:08: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 06:50:08: #1 finished! INFO @ Fri, 16 Oct 2020 06:50:08: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 06:50:08: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 06:50:13: 87000000 INFO @ Fri, 16 Oct 2020 06:50:19: 88000000 INFO @ Fri, 16 Oct 2020 06:50:19: #2 number of paired peaks: 92262 INFO @ Fri, 16 Oct 2020 06:50:19: start model_add_line... INFO @ Fri, 16 Oct 2020 06:50:20: start X-correlation... INFO @ Fri, 16 Oct 2020 06:50:20: end of X-cor INFO @ Fri, 16 Oct 2020 06:50:20: #2 finished! INFO @ Fri, 16 Oct 2020 06:50:20: #2 predicted fragment length is 245 bps INFO @ Fri, 16 Oct 2020 06:50:20: #2 alternative fragment length(s) may be 3,245 bps INFO @ Fri, 16 Oct 2020 06:50:20: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.10_model.r INFO @ Fri, 16 Oct 2020 06:50:20: #3 Call peaks... INFO @ Fri, 16 Oct 2020 06:50:20: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 16 Oct 2020 06:50:24: 89000000 INFO @ Fri, 16 Oct 2020 06:50:30: 90000000 INFO @ Fri, 16 Oct 2020 06:50:35: 91000000 INFO @ Fri, 16 Oct 2020 06:50:36: #1 tag size is determined as 50 bps INFO @ Fri, 16 Oct 2020 06:50:36: #1 tag size = 50 INFO @ Fri, 16 Oct 2020 06:50:36: #1 total tags in treatment: 91074716 INFO @ Fri, 16 Oct 2020 06:50:36: #1 user defined the maximum tags... INFO @ Fri, 16 Oct 2020 06:50:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 16 Oct 2020 06:50:38: #1 tags after filtering in treatment: 91074651 INFO @ Fri, 16 Oct 2020 06:50:38: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 16 Oct 2020 06:50:38: #1 finished! INFO @ Fri, 16 Oct 2020 06:50:38: #2 Build Peak Model... INFO @ Fri, 16 Oct 2020 06:50:38: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 16 Oct 2020 06:50:48: #2 number of paired peaks: 92262 INFO @ Fri, 16 Oct 2020 06:50:48: start model_add_line... INFO @ Fri, 16 Oct 2020 06:50:49: start X-correlation... INFO @ Fri, 16 Oct 2020 06:50:50: end of X-cor INFO @ Fri, 16 Oct 2020 06:50:50: #2 finished! INFO @ Fri, 16 Oct 2020 06:50:50: #2 predicted fragment length is 245 bps INFO @ Fri, 16 Oct 2020 06:50:50: #2 alternative fragment length(s) may be 3,245 bps INFO @ Fri, 16 Oct 2020 06:50:50: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.20_model.r INFO @ Fri, 16 Oct 2020 06:50:50: #3 Call peaks... INFO @ Fri, 16 Oct 2020 06:50:50: #3 Pre-compute pvalue-qvalue table... BigWig に変換しました。 INFO @ Fri, 16 Oct 2020 06:53:35: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 06:53:43: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 06:54:34: #3 Call peaks for each chromosome... INFO @ Fri, 16 Oct 2020 06:55:40: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.05_peaks.xls INFO @ Fri, 16 Oct 2020 06:55:40: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.10_peaks.xls INFO @ Fri, 16 Oct 2020 06:55:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.10_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 06:55:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.10_summits.bed INFO @ Fri, 16 Oct 2020 06:55:41: Done! INFO @ Fri, 16 Oct 2020 06:55:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.05_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 06:55:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.05_summits.bed INFO @ Fri, 16 Oct 2020 06:55:41: Done! pass1 - making usageList (102 chroms): 4 millis pass2 - checking and writing primary data (19786 records, 4 fields): 21 millis CompletedMACS2peakCalling pass1 - making usageList (164 chroms): 8 millis pass2 - checking and writing primary data (58125 records, 4 fields): 52 millis CompletedMACS2peakCalling INFO @ Fri, 16 Oct 2020 06:56:41: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.20_peaks.xls INFO @ Fri, 16 Oct 2020 06:56:41: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.20_peaks.narrowPeak INFO @ Fri, 16 Oct 2020 06:56:41: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX2745119/ERX2745119.20_summits.bed INFO @ Fri, 16 Oct 2020 06:56:41: Done! pass1 - making usageList (53 chroms): 1 millis pass2 - checking and writing primary data (2653 records, 4 fields): 5 millis CompletedMACS2peakCalling