Job ID = 2002128 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-05T00:48:52 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T01:36:06 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T01:36:48 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 159,296,072 reads read : 159,296,072 reads written : 159,296,072 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 02:54:53 159296072 reads; of these: 159296072 (100.00%) were unpaired; of these: 3615881 (2.27%) aligned 0 times 112002571 (70.31%) aligned exactly 1 time 43677620 (27.42%) aligned >1 times 97.73% overall alignment rate Time searching: 02:54:56 Overall time: 02:54:56 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 64 files... [bam_rmdupse_core] 21384079 / 155680191 = 0.1374 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 15:27:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 15:27:33: #1 read tag files... INFO @ Fri, 05 Jul 2019 15:27:33: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 15:27:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 15:27:33: #1 read tag files... INFO @ Fri, 05 Jul 2019 15:27:33: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 15:27:33: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 15:27:33: #1 read tag files... INFO @ Fri, 05 Jul 2019 15:27:33: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 15:27:40: 1000000 INFO @ Fri, 05 Jul 2019 15:27:41: 1000000 INFO @ Fri, 05 Jul 2019 15:27:41: 1000000 INFO @ Fri, 05 Jul 2019 15:27:48: 2000000 INFO @ Fri, 05 Jul 2019 15:27:49: 2000000 INFO @ Fri, 05 Jul 2019 15:27:49: 2000000 INFO @ Fri, 05 Jul 2019 15:27:55: 3000000 INFO @ Fri, 05 Jul 2019 15:27:57: 3000000 INFO @ Fri, 05 Jul 2019 15:27:57: 3000000 INFO @ Fri, 05 Jul 2019 15:28:02: 4000000 INFO @ Fri, 05 Jul 2019 15:28:04: 4000000 INFO @ Fri, 05 Jul 2019 15:28:05: 4000000 INFO @ Fri, 05 Jul 2019 15:28:09: 5000000 INFO @ Fri, 05 Jul 2019 15:28:12: 5000000 INFO @ Fri, 05 Jul 2019 15:28:13: 5000000 INFO @ Fri, 05 Jul 2019 15:28:17: 6000000 INFO @ Fri, 05 Jul 2019 15:28:20: 6000000 INFO @ Fri, 05 Jul 2019 15:28:21: 6000000 INFO @ Fri, 05 Jul 2019 15:28:24: 7000000 INFO @ Fri, 05 Jul 2019 15:28:28: 7000000 INFO @ Fri, 05 Jul 2019 15:28:29: 7000000 INFO @ Fri, 05 Jul 2019 15:28:31: 8000000 INFO @ Fri, 05 Jul 2019 15:28:36: 8000000 INFO @ Fri, 05 Jul 2019 15:28:36: 8000000 INFO @ Fri, 05 Jul 2019 15:28:38: 9000000 INFO @ Fri, 05 Jul 2019 15:28:43: 9000000 INFO @ Fri, 05 Jul 2019 15:28:44: 9000000 INFO @ Fri, 05 Jul 2019 15:28:46: 10000000 INFO @ Fri, 05 Jul 2019 15:28:51: 10000000 INFO @ Fri, 05 Jul 2019 15:28:52: 10000000 INFO @ Fri, 05 Jul 2019 15:28:53: 11000000 INFO @ Fri, 05 Jul 2019 15:28:59: 11000000 INFO @ Fri, 05 Jul 2019 15:29:00: 11000000 INFO @ Fri, 05 Jul 2019 15:29:01: 12000000 INFO @ Fri, 05 Jul 2019 15:29:07: 12000000 INFO @ Fri, 05 Jul 2019 15:29:08: 13000000 INFO @ Fri, 05 Jul 2019 15:29:08: 12000000 INFO @ Fri, 05 Jul 2019 15:29:14: 13000000 INFO @ Fri, 05 Jul 2019 15:29:15: 14000000 INFO @ Fri, 05 Jul 2019 15:29:16: 13000000 INFO @ Fri, 05 Jul 2019 15:29:22: 14000000 INFO @ Fri, 05 Jul 2019 15:29:22: 15000000 INFO @ Fri, 05 Jul 2019 15:29:24: 14000000 INFO @ Fri, 05 Jul 2019 15:29:29: 16000000 INFO @ Fri, 05 Jul 2019 15:29:30: 15000000 INFO @ Fri, 05 Jul 2019 15:29:31: 15000000 INFO @ Fri, 05 Jul 2019 15:29:36: 17000000 INFO @ Fri, 05 Jul 2019 15:29:37: 16000000 INFO @ Fri, 05 Jul 2019 15:29:39: 16000000 INFO @ Fri, 05 Jul 2019 15:29:44: 18000000 INFO @ Fri, 05 Jul 2019 15:29:45: 17000000 INFO @ Fri, 05 Jul 2019 15:29:47: 17000000 INFO @ Fri, 05 Jul 2019 15:29:51: 19000000 INFO @ Fri, 05 Jul 2019 15:29:53: 18000000 INFO @ Fri, 05 Jul 2019 15:29:55: 18000000 INFO @ Fri, 05 Jul 2019 15:29:58: 20000000 INFO @ Fri, 05 Jul 2019 15:30:00: 19000000 INFO @ Fri, 05 Jul 2019 15:30:02: 19000000 INFO @ Fri, 05 Jul 2019 15:30:05: 21000000 INFO @ Fri, 05 Jul 2019 15:30:08: 20000000 INFO @ Fri, 05 Jul 2019 15:30:10: 20000000 INFO @ Fri, 05 Jul 2019 15:30:14: 22000000 INFO @ Fri, 05 Jul 2019 15:30:16: 21000000 INFO @ Fri, 05 Jul 2019 15:30:19: 21000000 INFO @ Fri, 05 Jul 2019 15:30:23: 23000000 INFO @ Fri, 05 Jul 2019 15:30:23: 22000000 INFO @ Fri, 05 Jul 2019 15:30:27: 22000000 INFO @ Fri, 05 Jul 2019 15:30:30: 24000000 INFO @ Fri, 05 Jul 2019 15:30:31: 23000000 INFO @ Fri, 05 Jul 2019 15:30:35: 23000000 INFO @ Fri, 05 Jul 2019 15:30:37: 25000000 INFO @ Fri, 05 Jul 2019 15:30:39: 24000000 INFO @ Fri, 05 Jul 2019 15:30:43: 24000000 INFO @ Fri, 05 Jul 2019 15:30:45: 26000000 INFO @ Fri, 05 Jul 2019 15:30:46: 25000000 INFO @ Fri, 05 Jul 2019 15:30:50: 25000000 INFO @ Fri, 05 Jul 2019 15:30:52: 27000000 INFO @ Fri, 05 Jul 2019 15:30:54: 26000000 INFO @ Fri, 05 Jul 2019 15:30:58: 26000000 INFO @ Fri, 05 Jul 2019 15:30:59: 28000000 INFO @ Fri, 05 Jul 2019 15:31:02: 27000000 INFO @ Fri, 05 Jul 2019 15:31:06: 27000000 INFO @ Fri, 05 Jul 2019 15:31:07: 29000000 INFO @ Fri, 05 Jul 2019 15:31:09: 28000000 INFO @ Fri, 05 Jul 2019 15:31:14: 28000000 INFO @ Fri, 05 Jul 2019 15:31:14: 30000000 INFO @ Fri, 05 Jul 2019 15:31:17: 29000000 INFO @ Fri, 05 Jul 2019 15:31:21: 31000000 INFO @ Fri, 05 Jul 2019 15:31:22: 29000000 INFO @ Fri, 05 Jul 2019 15:31:25: 30000000 INFO @ Fri, 05 Jul 2019 15:31:28: 32000000 INFO @ Fri, 05 Jul 2019 15:31:29: 30000000 INFO @ Fri, 05 Jul 2019 15:31:32: 31000000 INFO @ Fri, 05 Jul 2019 15:31:35: 33000000 INFO @ Fri, 05 Jul 2019 15:31:37: 31000000 INFO @ Fri, 05 Jul 2019 15:31:40: 32000000 INFO @ Fri, 05 Jul 2019 15:31:43: 34000000 INFO @ Fri, 05 Jul 2019 15:31:45: 32000000 INFO @ Fri, 05 Jul 2019 15:31:48: 33000000 INFO @ Fri, 05 Jul 2019 15:31:50: 35000000 INFO @ Fri, 05 Jul 2019 15:31:53: 33000000 INFO @ Fri, 05 Jul 2019 15:31:55: 34000000 INFO @ Fri, 05 Jul 2019 15:31:57: 36000000 INFO @ Fri, 05 Jul 2019 15:32:00: 34000000 INFO @ Fri, 05 Jul 2019 15:32:03: 35000000 INFO @ Fri, 05 Jul 2019 15:32:04: 37000000 INFO @ Fri, 05 Jul 2019 15:32:08: 35000000 INFO @ Fri, 05 Jul 2019 15:32:11: 36000000 INFO @ Fri, 05 Jul 2019 15:32:11: 38000000 INFO @ Fri, 05 Jul 2019 15:32:16: 36000000 INFO @ Fri, 05 Jul 2019 15:32:18: 37000000 INFO @ Fri, 05 Jul 2019 15:32:19: 39000000 INFO @ Fri, 05 Jul 2019 15:32:24: 37000000 INFO @ Fri, 05 Jul 2019 15:32:26: 40000000 INFO @ Fri, 05 Jul 2019 15:32:26: 38000000 INFO @ Fri, 05 Jul 2019 15:32:32: 38000000 INFO @ Fri, 05 Jul 2019 15:32:33: 41000000 INFO @ Fri, 05 Jul 2019 15:32:34: 39000000 INFO @ Fri, 05 Jul 2019 15:32:40: 39000000 INFO @ Fri, 05 Jul 2019 15:32:41: 42000000 INFO @ Fri, 05 Jul 2019 15:32:42: 40000000 INFO @ Fri, 05 Jul 2019 15:32:48: 40000000 INFO @ Fri, 05 Jul 2019 15:32:49: 43000000 INFO @ Fri, 05 Jul 2019 15:32:49: 41000000 INFO @ Fri, 05 Jul 2019 15:32:55: 41000000 INFO @ Fri, 05 Jul 2019 15:32:56: 44000000 INFO @ Fri, 05 Jul 2019 15:32:57: 42000000 INFO @ Fri, 05 Jul 2019 15:33:03: 45000000 INFO @ Fri, 05 Jul 2019 15:33:03: 42000000 INFO @ Fri, 05 Jul 2019 15:33:05: 43000000 INFO @ Fri, 05 Jul 2019 15:33:10: 46000000 INFO @ Fri, 05 Jul 2019 15:33:11: 43000000 INFO @ Fri, 05 Jul 2019 15:33:12: 44000000 INFO @ Fri, 05 Jul 2019 15:33:18: 47000000 INFO @ Fri, 05 Jul 2019 15:33:19: 44000000 INFO @ Fri, 05 Jul 2019 15:33:20: 45000000 INFO @ Fri, 05 Jul 2019 15:33:25: 48000000 INFO @ Fri, 05 Jul 2019 15:33:27: 45000000 INFO @ Fri, 05 Jul 2019 15:33:28: 46000000 INFO @ Fri, 05 Jul 2019 15:33:32: 49000000 INFO @ Fri, 05 Jul 2019 15:33:35: 46000000 INFO @ Fri, 05 Jul 2019 15:33:36: 47000000 INFO @ Fri, 05 Jul 2019 15:33:39: 50000000 INFO @ Fri, 05 Jul 2019 15:33:43: 47000000 INFO @ Fri, 05 Jul 2019 15:33:43: 48000000 INFO @ Fri, 05 Jul 2019 15:33:47: 51000000 INFO @ Fri, 05 Jul 2019 15:33:50: 48000000 INFO @ Fri, 05 Jul 2019 15:33:51: 49000000 INFO @ Fri, 05 Jul 2019 15:33:56: 52000000 INFO @ Fri, 05 Jul 2019 15:33:58: 49000000 INFO @ Fri, 05 Jul 2019 15:33:59: 50000000 INFO @ Fri, 05 Jul 2019 15:34:04: 53000000 INFO @ Fri, 05 Jul 2019 15:34:06: 50000000 INFO @ Fri, 05 Jul 2019 15:34:07: 51000000 INFO @ Fri, 05 Jul 2019 15:34:11: 54000000 INFO @ Fri, 05 Jul 2019 15:34:14: 51000000 INFO @ Fri, 05 Jul 2019 15:34:14: 52000000 INFO @ Fri, 05 Jul 2019 15:34:19: 55000000 INFO @ Fri, 05 Jul 2019 15:34:22: 53000000 INFO @ Fri, 05 Jul 2019 15:34:22: 52000000 INFO @ Fri, 05 Jul 2019 15:34:27: 56000000 INFO @ Fri, 05 Jul 2019 15:34:29: 54000000 INFO @ Fri, 05 Jul 2019 15:34:29: 53000000 INFO @ Fri, 05 Jul 2019 15:34:35: 57000000 INFO @ Fri, 05 Jul 2019 15:34:36: 55000000 INFO @ Fri, 05 Jul 2019 15:34:36: 54000000 INFO @ Fri, 05 Jul 2019 15:34:43: 58000000 INFO @ Fri, 05 Jul 2019 15:34:43: 56000000 INFO @ Fri, 05 Jul 2019 15:34:43: 55000000 INFO @ Fri, 05 Jul 2019 15:34:50: 57000000 INFO @ Fri, 05 Jul 2019 15:34:50: 56000000 INFO @ Fri, 05 Jul 2019 15:34:51: 59000000 INFO @ Fri, 05 Jul 2019 15:34:57: 58000000 INFO @ Fri, 05 Jul 2019 15:34:57: 57000000 INFO @ Fri, 05 Jul 2019 15:34:58: 60000000 INFO @ Fri, 05 Jul 2019 15:35:04: 59000000 INFO @ Fri, 05 Jul 2019 15:35:05: 58000000 INFO @ Fri, 05 Jul 2019 15:35:06: 61000000 INFO @ Fri, 05 Jul 2019 15:35:12: 59000000 INFO @ Fri, 05 Jul 2019 15:35:12: 60000000 INFO @ Fri, 05 Jul 2019 15:35:14: 62000000 INFO @ Fri, 05 Jul 2019 15:35:19: 60000000 INFO @ Fri, 05 Jul 2019 15:35:19: 61000000 INFO @ Fri, 05 Jul 2019 15:35:22: 63000000 INFO @ Fri, 05 Jul 2019 15:35:26: 61000000 INFO @ Fri, 05 Jul 2019 15:35:26: 62000000 INFO @ Fri, 05 Jul 2019 15:35:30: 64000000 INFO @ Fri, 05 Jul 2019 15:35:33: 62000000 INFO @ Fri, 05 Jul 2019 15:35:33: 63000000 INFO @ Fri, 05 Jul 2019 15:35:38: 65000000 INFO @ Fri, 05 Jul 2019 15:35:40: 63000000 INFO @ Fri, 05 Jul 2019 15:35:40: 64000000 INFO @ Fri, 05 Jul 2019 15:35:45: 66000000 INFO @ Fri, 05 Jul 2019 15:35:47: 64000000 INFO @ Fri, 05 Jul 2019 15:35:47: 65000000 INFO @ Fri, 05 Jul 2019 15:35:53: 67000000 INFO @ Fri, 05 Jul 2019 15:35:54: 65000000 INFO @ Fri, 05 Jul 2019 15:35:54: 66000000 INFO @ Fri, 05 Jul 2019 15:36:01: 68000000 INFO @ Fri, 05 Jul 2019 15:36:01: 66000000 INFO @ Fri, 05 Jul 2019 15:36:02: 67000000 INFO @ Fri, 05 Jul 2019 15:36:08: 67000000 INFO @ Fri, 05 Jul 2019 15:36:09: 68000000 INFO @ Fri, 05 Jul 2019 15:36:09: 69000000 INFO @ Fri, 05 Jul 2019 15:36:16: 68000000 INFO @ Fri, 05 Jul 2019 15:36:16: 69000000 INFO @ Fri, 05 Jul 2019 15:36:17: 70000000 INFO @ Fri, 05 Jul 2019 15:36:23: 69000000 INFO @ Fri, 05 Jul 2019 15:36:23: 70000000 INFO @ Fri, 05 Jul 2019 15:36:24: 71000000 INFO @ Fri, 05 Jul 2019 15:36:30: 70000000 INFO @ Fri, 05 Jul 2019 15:36:30: 71000000 INFO @ Fri, 05 Jul 2019 15:36:31: 72000000 INFO @ Fri, 05 Jul 2019 15:36:37: 71000000 INFO @ Fri, 05 Jul 2019 15:36:37: 72000000 INFO @ Fri, 05 Jul 2019 15:36:39: 73000000 INFO @ Fri, 05 Jul 2019 15:36:44: 73000000 INFO @ Fri, 05 Jul 2019 15:36:44: 72000000 INFO @ Fri, 05 Jul 2019 15:36:47: 74000000 INFO @ Fri, 05 Jul 2019 15:36:51: 73000000 INFO @ Fri, 05 Jul 2019 15:36:51: 74000000 INFO @ Fri, 05 Jul 2019 15:36:55: 75000000 INFO @ Fri, 05 Jul 2019 15:36:58: 74000000 INFO @ Fri, 05 Jul 2019 15:36:58: 75000000 INFO @ Fri, 05 Jul 2019 15:37:03: 76000000 INFO @ Fri, 05 Jul 2019 15:37:05: 75000000 INFO @ Fri, 05 Jul 2019 15:37:05: 76000000 INFO @ Fri, 05 Jul 2019 15:37:10: 77000000 INFO @ Fri, 05 Jul 2019 15:37:12: 76000000 INFO @ Fri, 05 Jul 2019 15:37:12: 77000000 INFO @ Fri, 05 Jul 2019 15:37:18: 78000000 INFO @ Fri, 05 Jul 2019 15:37:19: 77000000 INFO @ Fri, 05 Jul 2019 15:37:19: 78000000 INFO @ Fri, 05 Jul 2019 15:37:26: 79000000 INFO @ Fri, 05 Jul 2019 15:37:26: 78000000 INFO @ Fri, 05 Jul 2019 15:37:26: 79000000 INFO @ Fri, 05 Jul 2019 15:37:33: 79000000 INFO @ Fri, 05 Jul 2019 15:37:33: 80000000 INFO @ Fri, 05 Jul 2019 15:37:34: 80000000 INFO @ Fri, 05 Jul 2019 15:37:40: 80000000 INFO @ Fri, 05 Jul 2019 15:37:40: 81000000 INFO @ Fri, 05 Jul 2019 15:37:41: 81000000 INFO @ Fri, 05 Jul 2019 15:37:47: 81000000 INFO @ Fri, 05 Jul 2019 15:37:47: 82000000 INFO @ Fri, 05 Jul 2019 15:37:49: 82000000 INFO @ Fri, 05 Jul 2019 15:37:54: 82000000 INFO @ Fri, 05 Jul 2019 15:37:54: 83000000 INFO @ Fri, 05 Jul 2019 15:37:57: 83000000 INFO @ Fri, 05 Jul 2019 15:38:01: 83000000 INFO @ Fri, 05 Jul 2019 15:38:01: 84000000 INFO @ Fri, 05 Jul 2019 15:38:05: 84000000 INFO @ Fri, 05 Jul 2019 15:38:08: 84000000 INFO @ Fri, 05 Jul 2019 15:38:08: 85000000 INFO @ Fri, 05 Jul 2019 15:38:12: 85000000 INFO @ Fri, 05 Jul 2019 15:38:15: 85000000 INFO @ Fri, 05 Jul 2019 15:38:15: 86000000 INFO @ Fri, 05 Jul 2019 15:38:20: 86000000 INFO @ Fri, 05 Jul 2019 15:38:22: 86000000 INFO @ Fri, 05 Jul 2019 15:38:22: 87000000 INFO @ Fri, 05 Jul 2019 15:38:28: 87000000 INFO @ Fri, 05 Jul 2019 15:38:29: 87000000 INFO @ Fri, 05 Jul 2019 15:38:29: 88000000 INFO @ Fri, 05 Jul 2019 15:38:36: 88000000 INFO @ Fri, 05 Jul 2019 15:38:36: 88000000 INFO @ Fri, 05 Jul 2019 15:38:36: 89000000 INFO @ Fri, 05 Jul 2019 15:38:43: 90000000 INFO @ Fri, 05 Jul 2019 15:38:43: 89000000 INFO @ Fri, 05 Jul 2019 15:38:43: 89000000 INFO @ Fri, 05 Jul 2019 15:38:50: 91000000 INFO @ Fri, 05 Jul 2019 15:38:50: 90000000 INFO @ Fri, 05 Jul 2019 15:38:51: 90000000 INFO @ Fri, 05 Jul 2019 15:38:57: 92000000 INFO @ Fri, 05 Jul 2019 15:38:57: 91000000 INFO @ Fri, 05 Jul 2019 15:38:59: 91000000 INFO @ Fri, 05 Jul 2019 15:39:04: 93000000 INFO @ Fri, 05 Jul 2019 15:39:04: 92000000 INFO @ Fri, 05 Jul 2019 15:39:06: 92000000 INFO @ Fri, 05 Jul 2019 15:39:11: 94000000 INFO @ Fri, 05 Jul 2019 15:39:11: 93000000 INFO @ Fri, 05 Jul 2019 15:39:14: 93000000 INFO @ Fri, 05 Jul 2019 15:39:18: 95000000 INFO @ Fri, 05 Jul 2019 15:39:18: 94000000 INFO @ Fri, 05 Jul 2019 15:39:22: 94000000 INFO @ Fri, 05 Jul 2019 15:39:25: 96000000 INFO @ Fri, 05 Jul 2019 15:39:25: 95000000 INFO @ Fri, 05 Jul 2019 15:39:30: 95000000 INFO @ Fri, 05 Jul 2019 15:39:32: 97000000 INFO @ Fri, 05 Jul 2019 15:39:33: 96000000 INFO @ Fri, 05 Jul 2019 15:39:37: 96000000 INFO @ Fri, 05 Jul 2019 15:39:39: 98000000 INFO @ Fri, 05 Jul 2019 15:39:40: 97000000 INFO @ Fri, 05 Jul 2019 15:39:45: 97000000 INFO @ Fri, 05 Jul 2019 15:39:46: 99000000 INFO @ Fri, 05 Jul 2019 15:39:47: 98000000 INFO @ Fri, 05 Jul 2019 15:39:53: 98000000 INFO @ Fri, 05 Jul 2019 15:39:53: 100000000 INFO @ Fri, 05 Jul 2019 15:39:54: 99000000 INFO @ Fri, 05 Jul 2019 15:40:00: 101000000 INFO @ Fri, 05 Jul 2019 15:40:01: 100000000 INFO @ Fri, 05 Jul 2019 15:40:01: 99000000 INFO @ Fri, 05 Jul 2019 15:40:07: 102000000 INFO @ Fri, 05 Jul 2019 15:40:08: 101000000 INFO @ Fri, 05 Jul 2019 15:40:08: 100000000 INFO @ Fri, 05 Jul 2019 15:40:14: 103000000 INFO @ Fri, 05 Jul 2019 15:40:15: 102000000 INFO @ Fri, 05 Jul 2019 15:40:16: 101000000 INFO @ Fri, 05 Jul 2019 15:40:21: 104000000 INFO @ Fri, 05 Jul 2019 15:40:22: 103000000 INFO @ Fri, 05 Jul 2019 15:40:24: 102000000 INFO @ Fri, 05 Jul 2019 15:40:28: 105000000 INFO @ Fri, 05 Jul 2019 15:40:29: 104000000 INFO @ Fri, 05 Jul 2019 15:40:32: 103000000 INFO @ Fri, 05 Jul 2019 15:40:35: 106000000 INFO @ Fri, 05 Jul 2019 15:40:36: 105000000 INFO @ Fri, 05 Jul 2019 15:40:39: 104000000 INFO @ Fri, 05 Jul 2019 15:40:42: 107000000 INFO @ Fri, 05 Jul 2019 15:40:43: 106000000 INFO @ Fri, 05 Jul 2019 15:40:47: 105000000 INFO @ Fri, 05 Jul 2019 15:40:49: 108000000 INFO @ Fri, 05 Jul 2019 15:40:50: 107000000 INFO @ Fri, 05 Jul 2019 15:40:55: 106000000 INFO @ Fri, 05 Jul 2019 15:40:57: 109000000 INFO @ Fri, 05 Jul 2019 15:40:57: 108000000 INFO @ Fri, 05 Jul 2019 15:41:03: 107000000 INFO @ Fri, 05 Jul 2019 15:41:04: 110000000 INFO @ Fri, 05 Jul 2019 15:41:04: 109000000 INFO @ Fri, 05 Jul 2019 15:41:10: 108000000 INFO @ Fri, 05 Jul 2019 15:41:11: 111000000 INFO @ Fri, 05 Jul 2019 15:41:11: 110000000 INFO @ Fri, 05 Jul 2019 15:41:17: 109000000 INFO @ Fri, 05 Jul 2019 15:41:18: 112000000 INFO @ Fri, 05 Jul 2019 15:41:18: 111000000 INFO @ Fri, 05 Jul 2019 15:41:25: 112000000 INFO @ Fri, 05 Jul 2019 15:41:25: 113000000 INFO @ Fri, 05 Jul 2019 15:41:25: 110000000 INFO @ Fri, 05 Jul 2019 15:41:32: 113000000 INFO @ Fri, 05 Jul 2019 15:41:32: 114000000 INFO @ Fri, 05 Jul 2019 15:41:33: 111000000 INFO @ Fri, 05 Jul 2019 15:41:40: 115000000 INFO @ Fri, 05 Jul 2019 15:41:40: 114000000 INFO @ Fri, 05 Jul 2019 15:41:41: 112000000 INFO @ Fri, 05 Jul 2019 15:41:47: 115000000 INFO @ Fri, 05 Jul 2019 15:41:47: 116000000 INFO @ Fri, 05 Jul 2019 15:41:49: 113000000 INFO @ Fri, 05 Jul 2019 15:41:54: 117000000 INFO @ Fri, 05 Jul 2019 15:41:54: 116000000 INFO @ Fri, 05 Jul 2019 15:41:57: 114000000 INFO @ Fri, 05 Jul 2019 15:42:01: 118000000 INFO @ Fri, 05 Jul 2019 15:42:01: 117000000 INFO @ Fri, 05 Jul 2019 15:42:04: 115000000 INFO @ Fri, 05 Jul 2019 15:42:08: 119000000 INFO @ Fri, 05 Jul 2019 15:42:08: 118000000 INFO @ Fri, 05 Jul 2019 15:42:12: 116000000 INFO @ Fri, 05 Jul 2019 15:42:15: 120000000 INFO @ Fri, 05 Jul 2019 15:42:15: 119000000 INFO @ Fri, 05 Jul 2019 15:42:20: 117000000 INFO @ Fri, 05 Jul 2019 15:42:22: 121000000 INFO @ Fri, 05 Jul 2019 15:42:22: 120000000 INFO @ Fri, 05 Jul 2019 15:42:28: 118000000 INFO @ Fri, 05 Jul 2019 15:42:29: 121000000 INFO @ Fri, 05 Jul 2019 15:42:29: 122000000 INFO @ Fri, 05 Jul 2019 15:42:35: 119000000 INFO @ Fri, 05 Jul 2019 15:42:36: 122000000 INFO @ Fri, 05 Jul 2019 15:42:36: 123000000 INFO @ Fri, 05 Jul 2019 15:42:43: 120000000 INFO @ Fri, 05 Jul 2019 15:42:43: 124000000 INFO @ Fri, 05 Jul 2019 15:42:43: 123000000 INFO @ Fri, 05 Jul 2019 15:42:50: 125000000 INFO @ Fri, 05 Jul 2019 15:42:50: 124000000 INFO @ Fri, 05 Jul 2019 15:42:51: 121000000 INFO @ Fri, 05 Jul 2019 15:42:57: 126000000 INFO @ Fri, 05 Jul 2019 15:42:57: 125000000 INFO @ Fri, 05 Jul 2019 15:42:58: 122000000 INFO @ Fri, 05 Jul 2019 15:43:04: 127000000 INFO @ Fri, 05 Jul 2019 15:43:04: 126000000 INFO @ Fri, 05 Jul 2019 15:43:06: 123000000 INFO @ Fri, 05 Jul 2019 15:43:11: 128000000 INFO @ Fri, 05 Jul 2019 15:43:11: 127000000 INFO @ Fri, 05 Jul 2019 15:43:14: 124000000 INFO @ Fri, 05 Jul 2019 15:43:18: 128000000 INFO @ Fri, 05 Jul 2019 15:43:18: 129000000 INFO @ Fri, 05 Jul 2019 15:43:22: 125000000 INFO @ Fri, 05 Jul 2019 15:43:26: 130000000 INFO @ Fri, 05 Jul 2019 15:43:26: 129000000 INFO @ Fri, 05 Jul 2019 15:43:29: 126000000 INFO @ Fri, 05 Jul 2019 15:43:33: 131000000 INFO @ Fri, 05 Jul 2019 15:43:33: 130000000 INFO @ Fri, 05 Jul 2019 15:43:37: 127000000 INFO @ Fri, 05 Jul 2019 15:43:40: 132000000 INFO @ Fri, 05 Jul 2019 15:43:40: 131000000 INFO @ Fri, 05 Jul 2019 15:43:45: 128000000 INFO @ Fri, 05 Jul 2019 15:43:47: 132000000 INFO @ Fri, 05 Jul 2019 15:43:47: 133000000 INFO @ Fri, 05 Jul 2019 15:43:53: 129000000 INFO @ Fri, 05 Jul 2019 15:43:54: 133000000 INFO @ Fri, 05 Jul 2019 15:43:54: 134000000 INFO @ Fri, 05 Jul 2019 15:43:58: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 15:43:58: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 15:43:58: #1 total tags in treatment: 134296112 INFO @ Fri, 05 Jul 2019 15:43:58: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 15:43:58: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 15:44:00: 130000000 INFO @ Fri, 05 Jul 2019 15:44:01: #1 tags after filtering in treatment: 134296079 INFO @ Fri, 05 Jul 2019 15:44:01: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 15:44:01: #1 finished! INFO @ Fri, 05 Jul 2019 15:44:01: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 15:44:01: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 15:44:01: 134000000 INFO @ Fri, 05 Jul 2019 15:44:05: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 15:44:05: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 15:44:05: #1 total tags in treatment: 134296112 INFO @ Fri, 05 Jul 2019 15:44:05: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 15:44:05: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 15:44:08: #1 tags after filtering in treatment: 134296079 INFO @ Fri, 05 Jul 2019 15:44:08: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 15:44:08: #1 finished! INFO @ Fri, 05 Jul 2019 15:44:08: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 15:44:08: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 15:44:08: 131000000 INFO @ Fri, 05 Jul 2019 15:44:14: #2 number of paired peaks: 7250 INFO @ Fri, 05 Jul 2019 15:44:14: start model_add_line... INFO @ Fri, 05 Jul 2019 15:44:15: start X-correlation... INFO @ Fri, 05 Jul 2019 15:44:15: end of X-cor INFO @ Fri, 05 Jul 2019 15:44:15: #2 finished! INFO @ Fri, 05 Jul 2019 15:44:15: #2 predicted fragment length is 105 bps INFO @ Fri, 05 Jul 2019 15:44:15: #2 alternative fragment length(s) may be 3,105 bps INFO @ Fri, 05 Jul 2019 15:44:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.20_model.r INFO @ Fri, 05 Jul 2019 15:44:15: #3 Call peaks... INFO @ Fri, 05 Jul 2019 15:44:15: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 15:44:16: 132000000 INFO @ Fri, 05 Jul 2019 15:44:21: #2 number of paired peaks: 7250 INFO @ Fri, 05 Jul 2019 15:44:21: start model_add_line... INFO @ Fri, 05 Jul 2019 15:44:22: start X-correlation... INFO @ Fri, 05 Jul 2019 15:44:22: end of X-cor INFO @ Fri, 05 Jul 2019 15:44:22: #2 finished! INFO @ Fri, 05 Jul 2019 15:44:22: #2 predicted fragment length is 105 bps INFO @ Fri, 05 Jul 2019 15:44:22: #2 alternative fragment length(s) may be 3,105 bps INFO @ Fri, 05 Jul 2019 15:44:22: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.05_model.r INFO @ Fri, 05 Jul 2019 15:44:22: #3 Call peaks... INFO @ Fri, 05 Jul 2019 15:44:22: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 15:44:24: 133000000 INFO @ Fri, 05 Jul 2019 15:44:32: 134000000 INFO @ Fri, 05 Jul 2019 15:44:36: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 15:44:36: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 15:44:36: #1 total tags in treatment: 134296112 INFO @ Fri, 05 Jul 2019 15:44:36: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 15:44:36: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 15:44:38: #1 tags after filtering in treatment: 134296079 INFO @ Fri, 05 Jul 2019 15:44:38: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 15:44:38: #1 finished! INFO @ Fri, 05 Jul 2019 15:44:38: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 15:44:38: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 15:44:51: #2 number of paired peaks: 7250 INFO @ Fri, 05 Jul 2019 15:44:51: start model_add_line... INFO @ Fri, 05 Jul 2019 15:44:53: start X-correlation... INFO @ Fri, 05 Jul 2019 15:44:53: end of X-cor INFO @ Fri, 05 Jul 2019 15:44:53: #2 finished! INFO @ Fri, 05 Jul 2019 15:44:53: #2 predicted fragment length is 105 bps INFO @ Fri, 05 Jul 2019 15:44:53: #2 alternative fragment length(s) may be 3,105 bps INFO @ Fri, 05 Jul 2019 15:44:53: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.10_model.r INFO @ Fri, 05 Jul 2019 15:44:53: #3 Call peaks... INFO @ Fri, 05 Jul 2019 15:44:53: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 15:50:56: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 15:50:58: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 15:51:32: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 15:54:24: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.20_peaks.xls INFO @ Fri, 05 Jul 2019 15:54:24: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 15:54:24: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.20_summits.bed INFO @ Fri, 05 Jul 2019 15:54:24: Done! pass1 - making usageList (45 chroms): 2 millis pass2 - checking and writing primary data (745 records, 4 fields): 12 millis INFO @ Fri, 05 Jul 2019 15:54:28: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.05_peaks.xls INFO @ Fri, 05 Jul 2019 15:54:28: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 15:54:28: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.05_summits.bed INFO @ Fri, 05 Jul 2019 15:54:28: Done! pass1 - making usageList (130 chroms): 6 millis pass2 - checking and writing primary data (13401 records, 4 fields): 25 millis CompletedMACS2peakCalling CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 15:55:04: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.10_peaks.xls INFO @ Fri, 05 Jul 2019 15:55:04: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 15:55:04: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX102030/ERX102030.10_summits.bed INFO @ Fri, 05 Jul 2019 15:55:04: Done! pass1 - making usageList (77 chroms): 3 millis pass2 - checking and writing primary data (3296 records, 4 fields): 15 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。