Job ID = 2001703 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-05T01:36:06 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 162,116,733 reads read : 162,116,733 reads written : 162,116,733 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:00 Multiseed full-index search: 02:41:41 162116733 reads; of these: 162116733 (100.00%) were unpaired; of these: 4004673 (2.47%) aligned 0 times 112502729 (69.40%) aligned exactly 1 time 45609331 (28.13%) aligned >1 times 97.53% overall alignment rate Time searching: 02:41:41 Overall time: 02:41:41 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 68 files... [bam_rmdupse_core] 22766769 / 158112060 = 0.1440 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 16:13:43: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 16:13:43: #1 read tag files... INFO @ Fri, 05 Jul 2019 16:13:43: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 16:13:44: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 16:13:44: #1 read tag files... INFO @ Fri, 05 Jul 2019 16:13:44: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 16:13:45: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 16:13:45: #1 read tag files... INFO @ Fri, 05 Jul 2019 16:13:45: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 16:13:51: 1000000 INFO @ Fri, 05 Jul 2019 16:13:51: 1000000 INFO @ Fri, 05 Jul 2019 16:13:52: 1000000 INFO @ Fri, 05 Jul 2019 16:13:59: 2000000 INFO @ Fri, 05 Jul 2019 16:13:59: 2000000 INFO @ Fri, 05 Jul 2019 16:14:00: 2000000 INFO @ Fri, 05 Jul 2019 16:14:08: 3000000 INFO @ Fri, 05 Jul 2019 16:14:08: 3000000 INFO @ Fri, 05 Jul 2019 16:14:08: 3000000 INFO @ Fri, 05 Jul 2019 16:14:16: 4000000 INFO @ Fri, 05 Jul 2019 16:14:16: 4000000 INFO @ Fri, 05 Jul 2019 16:14:16: 4000000 INFO @ Fri, 05 Jul 2019 16:14:24: 5000000 INFO @ Fri, 05 Jul 2019 16:14:24: 5000000 INFO @ Fri, 05 Jul 2019 16:14:24: 5000000 INFO @ Fri, 05 Jul 2019 16:14:31: 6000000 INFO @ Fri, 05 Jul 2019 16:14:32: 6000000 INFO @ Fri, 05 Jul 2019 16:14:32: 6000000 INFO @ Fri, 05 Jul 2019 16:14:38: 7000000 INFO @ Fri, 05 Jul 2019 16:14:39: 7000000 INFO @ Fri, 05 Jul 2019 16:14:40: 7000000 INFO @ Fri, 05 Jul 2019 16:14:46: 8000000 INFO @ Fri, 05 Jul 2019 16:14:46: 8000000 INFO @ Fri, 05 Jul 2019 16:14:48: 8000000 INFO @ Fri, 05 Jul 2019 16:14:53: 9000000 INFO @ Fri, 05 Jul 2019 16:14:54: 9000000 INFO @ Fri, 05 Jul 2019 16:14:56: 9000000 INFO @ Fri, 05 Jul 2019 16:15:00: 10000000 INFO @ Fri, 05 Jul 2019 16:15:01: 10000000 INFO @ Fri, 05 Jul 2019 16:15:04: 10000000 INFO @ Fri, 05 Jul 2019 16:15:07: 11000000 INFO @ Fri, 05 Jul 2019 16:15:08: 11000000 INFO @ Fri, 05 Jul 2019 16:15:12: 11000000 INFO @ Fri, 05 Jul 2019 16:15:15: 12000000 INFO @ Fri, 05 Jul 2019 16:15:15: 12000000 INFO @ Fri, 05 Jul 2019 16:15:20: 12000000 INFO @ Fri, 05 Jul 2019 16:15:22: 13000000 INFO @ Fri, 05 Jul 2019 16:15:23: 13000000 INFO @ Fri, 05 Jul 2019 16:15:27: 13000000 INFO @ Fri, 05 Jul 2019 16:15:29: 14000000 INFO @ Fri, 05 Jul 2019 16:15:30: 14000000 INFO @ Fri, 05 Jul 2019 16:15:35: 14000000 INFO @ Fri, 05 Jul 2019 16:15:36: 15000000 INFO @ Fri, 05 Jul 2019 16:15:37: 15000000 INFO @ Fri, 05 Jul 2019 16:15:44: 15000000 INFO @ Fri, 05 Jul 2019 16:15:44: 16000000 INFO @ Fri, 05 Jul 2019 16:15:45: 16000000 INFO @ Fri, 05 Jul 2019 16:15:51: 17000000 INFO @ Fri, 05 Jul 2019 16:15:52: 17000000 INFO @ Fri, 05 Jul 2019 16:15:52: 16000000 INFO @ Fri, 05 Jul 2019 16:15:58: 18000000 INFO @ Fri, 05 Jul 2019 16:15:59: 18000000 INFO @ Fri, 05 Jul 2019 16:16:00: 17000000 INFO @ Fri, 05 Jul 2019 16:16:05: 19000000 INFO @ Fri, 05 Jul 2019 16:16:06: 19000000 INFO @ Fri, 05 Jul 2019 16:16:08: 18000000 INFO @ Fri, 05 Jul 2019 16:16:13: 20000000 INFO @ Fri, 05 Jul 2019 16:16:13: 20000000 INFO @ Fri, 05 Jul 2019 16:16:16: 19000000 INFO @ Fri, 05 Jul 2019 16:16:20: 21000000 INFO @ Fri, 05 Jul 2019 16:16:21: 21000000 INFO @ Fri, 05 Jul 2019 16:16:24: 20000000 INFO @ Fri, 05 Jul 2019 16:16:27: 22000000 INFO @ Fri, 05 Jul 2019 16:16:28: 22000000 INFO @ Fri, 05 Jul 2019 16:16:32: 21000000 INFO @ Fri, 05 Jul 2019 16:16:35: 23000000 INFO @ Fri, 05 Jul 2019 16:16:36: 23000000 INFO @ Fri, 05 Jul 2019 16:16:40: 22000000 INFO @ Fri, 05 Jul 2019 16:16:42: 24000000 INFO @ Fri, 05 Jul 2019 16:16:43: 24000000 INFO @ Fri, 05 Jul 2019 16:16:48: 23000000 INFO @ Fri, 05 Jul 2019 16:16:50: 25000000 INFO @ Fri, 05 Jul 2019 16:16:50: 25000000 INFO @ Fri, 05 Jul 2019 16:16:56: 24000000 INFO @ Fri, 05 Jul 2019 16:16:58: 26000000 INFO @ Fri, 05 Jul 2019 16:16:58: 26000000 INFO @ Fri, 05 Jul 2019 16:17:05: 25000000 INFO @ Fri, 05 Jul 2019 16:17:05: 27000000 INFO @ Fri, 05 Jul 2019 16:17:06: 27000000 INFO @ Fri, 05 Jul 2019 16:17:13: 28000000 INFO @ Fri, 05 Jul 2019 16:17:13: 26000000 INFO @ Fri, 05 Jul 2019 16:17:13: 28000000 INFO @ Fri, 05 Jul 2019 16:17:20: 29000000 INFO @ Fri, 05 Jul 2019 16:17:21: 29000000 INFO @ Fri, 05 Jul 2019 16:17:21: 27000000 INFO @ Fri, 05 Jul 2019 16:17:27: 30000000 INFO @ Fri, 05 Jul 2019 16:17:28: 30000000 INFO @ Fri, 05 Jul 2019 16:17:29: 28000000 INFO @ Fri, 05 Jul 2019 16:17:35: 31000000 INFO @ Fri, 05 Jul 2019 16:17:35: 31000000 INFO @ Fri, 05 Jul 2019 16:17:37: 29000000 INFO @ Fri, 05 Jul 2019 16:17:42: 32000000 INFO @ Fri, 05 Jul 2019 16:17:43: 32000000 INFO @ Fri, 05 Jul 2019 16:17:45: 30000000 INFO @ Fri, 05 Jul 2019 16:17:50: 33000000 INFO @ Fri, 05 Jul 2019 16:17:50: 33000000 INFO @ Fri, 05 Jul 2019 16:17:53: 31000000 INFO @ Fri, 05 Jul 2019 16:17:57: 34000000 INFO @ Fri, 05 Jul 2019 16:17:57: 34000000 INFO @ Fri, 05 Jul 2019 16:18:01: 32000000 INFO @ Fri, 05 Jul 2019 16:18:04: 35000000 INFO @ Fri, 05 Jul 2019 16:18:05: 35000000 INFO @ Fri, 05 Jul 2019 16:18:09: 33000000 INFO @ Fri, 05 Jul 2019 16:18:12: 36000000 INFO @ Fri, 05 Jul 2019 16:18:12: 36000000 INFO @ Fri, 05 Jul 2019 16:18:17: 34000000 INFO @ Fri, 05 Jul 2019 16:18:19: 37000000 INFO @ Fri, 05 Jul 2019 16:18:19: 37000000 INFO @ Fri, 05 Jul 2019 16:18:25: 35000000 INFO @ Fri, 05 Jul 2019 16:18:26: 38000000 INFO @ Fri, 05 Jul 2019 16:18:27: 38000000 INFO @ Fri, 05 Jul 2019 16:18:33: 36000000 INFO @ Fri, 05 Jul 2019 16:18:34: 39000000 INFO @ Fri, 05 Jul 2019 16:18:34: 39000000 INFO @ Fri, 05 Jul 2019 16:18:41: 40000000 INFO @ Fri, 05 Jul 2019 16:18:41: 37000000 INFO @ Fri, 05 Jul 2019 16:18:41: 40000000 INFO @ Fri, 05 Jul 2019 16:18:48: 41000000 INFO @ Fri, 05 Jul 2019 16:18:49: 41000000 INFO @ Fri, 05 Jul 2019 16:18:49: 38000000 INFO @ Fri, 05 Jul 2019 16:18:56: 42000000 INFO @ Fri, 05 Jul 2019 16:18:56: 42000000 INFO @ Fri, 05 Jul 2019 16:18:57: 39000000 INFO @ Fri, 05 Jul 2019 16:19:03: 43000000 INFO @ Fri, 05 Jul 2019 16:19:03: 43000000 INFO @ Fri, 05 Jul 2019 16:19:05: 40000000 INFO @ Fri, 05 Jul 2019 16:19:10: 44000000 INFO @ Fri, 05 Jul 2019 16:19:10: 44000000 INFO @ Fri, 05 Jul 2019 16:19:13: 41000000 INFO @ Fri, 05 Jul 2019 16:19:18: 45000000 INFO @ Fri, 05 Jul 2019 16:19:18: 45000000 INFO @ Fri, 05 Jul 2019 16:19:21: 42000000 INFO @ Fri, 05 Jul 2019 16:19:25: 46000000 INFO @ Fri, 05 Jul 2019 16:19:25: 46000000 INFO @ Fri, 05 Jul 2019 16:19:29: 43000000 INFO @ Fri, 05 Jul 2019 16:19:32: 47000000 INFO @ Fri, 05 Jul 2019 16:19:32: 47000000 INFO @ Fri, 05 Jul 2019 16:19:37: 44000000 INFO @ Fri, 05 Jul 2019 16:19:40: 48000000 INFO @ Fri, 05 Jul 2019 16:19:40: 48000000 INFO @ Fri, 05 Jul 2019 16:19:45: 45000000 INFO @ Fri, 05 Jul 2019 16:19:50: 49000000 INFO @ Fri, 05 Jul 2019 16:19:50: 49000000 INFO @ Fri, 05 Jul 2019 16:19:53: 46000000 INFO @ Fri, 05 Jul 2019 16:19:59: 50000000 INFO @ Fri, 05 Jul 2019 16:19:59: 50000000 INFO @ Fri, 05 Jul 2019 16:20:00: 47000000 INFO @ Fri, 05 Jul 2019 16:20:06: 51000000 INFO @ Fri, 05 Jul 2019 16:20:07: 51000000 INFO @ Fri, 05 Jul 2019 16:20:08: 48000000 INFO @ Fri, 05 Jul 2019 16:20:14: 52000000 INFO @ Fri, 05 Jul 2019 16:20:15: 52000000 INFO @ Fri, 05 Jul 2019 16:20:18: 49000000 INFO @ Fri, 05 Jul 2019 16:20:21: 53000000 INFO @ Fri, 05 Jul 2019 16:20:24: 53000000 INFO @ Fri, 05 Jul 2019 16:20:27: 50000000 INFO @ Fri, 05 Jul 2019 16:20:29: 54000000 INFO @ Fri, 05 Jul 2019 16:20:33: 54000000 INFO @ Fri, 05 Jul 2019 16:20:35: 51000000 INFO @ Fri, 05 Jul 2019 16:20:36: 55000000 INFO @ Fri, 05 Jul 2019 16:20:43: 52000000 INFO @ Fri, 05 Jul 2019 16:20:43: 55000000 INFO @ Fri, 05 Jul 2019 16:20:43: 56000000 INFO @ Fri, 05 Jul 2019 16:20:51: 53000000 INFO @ Fri, 05 Jul 2019 16:20:51: 57000000 INFO @ Fri, 05 Jul 2019 16:20:52: 56000000 INFO @ Fri, 05 Jul 2019 16:20:58: 58000000 INFO @ Fri, 05 Jul 2019 16:20:59: 54000000 INFO @ Fri, 05 Jul 2019 16:21:01: 57000000 INFO @ Fri, 05 Jul 2019 16:21:06: 59000000 INFO @ Fri, 05 Jul 2019 16:21:07: 55000000 INFO @ Fri, 05 Jul 2019 16:21:11: 58000000 INFO @ Fri, 05 Jul 2019 16:21:14: 60000000 INFO @ Fri, 05 Jul 2019 16:21:15: 56000000 INFO @ Fri, 05 Jul 2019 16:21:21: 59000000 INFO @ Fri, 05 Jul 2019 16:21:21: 61000000 INFO @ Fri, 05 Jul 2019 16:21:23: 57000000 INFO @ Fri, 05 Jul 2019 16:21:29: 62000000 INFO @ Fri, 05 Jul 2019 16:21:31: 60000000 INFO @ Fri, 05 Jul 2019 16:21:31: 58000000 INFO @ Fri, 05 Jul 2019 16:21:36: 63000000 INFO @ Fri, 05 Jul 2019 16:21:40: 59000000 INFO @ Fri, 05 Jul 2019 16:21:40: 61000000 INFO @ Fri, 05 Jul 2019 16:21:44: 64000000 INFO @ Fri, 05 Jul 2019 16:21:48: 60000000 INFO @ Fri, 05 Jul 2019 16:21:50: 62000000 INFO @ Fri, 05 Jul 2019 16:21:51: 65000000 INFO @ Fri, 05 Jul 2019 16:21:56: 61000000 INFO @ Fri, 05 Jul 2019 16:21:59: 66000000 INFO @ Fri, 05 Jul 2019 16:22:01: 63000000 INFO @ Fri, 05 Jul 2019 16:22:04: 62000000 INFO @ Fri, 05 Jul 2019 16:22:06: 67000000 INFO @ Fri, 05 Jul 2019 16:22:10: 64000000 INFO @ Fri, 05 Jul 2019 16:22:12: 63000000 INFO @ Fri, 05 Jul 2019 16:22:14: 68000000 INFO @ Fri, 05 Jul 2019 16:22:20: 65000000 INFO @ Fri, 05 Jul 2019 16:22:20: 64000000 INFO @ Fri, 05 Jul 2019 16:22:21: 69000000 INFO @ Fri, 05 Jul 2019 16:22:28: 70000000 INFO @ Fri, 05 Jul 2019 16:22:28: 65000000 INFO @ Fri, 05 Jul 2019 16:22:30: 66000000 INFO @ Fri, 05 Jul 2019 16:22:36: 71000000 INFO @ Fri, 05 Jul 2019 16:22:37: 66000000 INFO @ Fri, 05 Jul 2019 16:22:39: 67000000 INFO @ Fri, 05 Jul 2019 16:22:43: 72000000 INFO @ Fri, 05 Jul 2019 16:22:45: 67000000 INFO @ Fri, 05 Jul 2019 16:22:49: 68000000 INFO @ Fri, 05 Jul 2019 16:22:50: 73000000 INFO @ Fri, 05 Jul 2019 16:22:53: 68000000 INFO @ Fri, 05 Jul 2019 16:22:57: 74000000 INFO @ Fri, 05 Jul 2019 16:22:58: 69000000 INFO @ Fri, 05 Jul 2019 16:23:01: 69000000 INFO @ Fri, 05 Jul 2019 16:23:05: 75000000 INFO @ Fri, 05 Jul 2019 16:23:08: 70000000 INFO @ Fri, 05 Jul 2019 16:23:09: 70000000 INFO @ Fri, 05 Jul 2019 16:23:12: 76000000 INFO @ Fri, 05 Jul 2019 16:23:17: 71000000 INFO @ Fri, 05 Jul 2019 16:23:17: 71000000 INFO @ Fri, 05 Jul 2019 16:23:19: 77000000 INFO @ Fri, 05 Jul 2019 16:23:25: 72000000 INFO @ Fri, 05 Jul 2019 16:23:27: 72000000 INFO @ Fri, 05 Jul 2019 16:23:28: 78000000 INFO @ Fri, 05 Jul 2019 16:23:33: 73000000 INFO @ Fri, 05 Jul 2019 16:23:35: 79000000 INFO @ Fri, 05 Jul 2019 16:23:36: 73000000 INFO @ Fri, 05 Jul 2019 16:23:41: 74000000 INFO @ Fri, 05 Jul 2019 16:23:42: 80000000 INFO @ Fri, 05 Jul 2019 16:23:45: 74000000 INFO @ Fri, 05 Jul 2019 16:23:49: 75000000 INFO @ Fri, 05 Jul 2019 16:23:49: 81000000 INFO @ Fri, 05 Jul 2019 16:23:55: 75000000 INFO @ Fri, 05 Jul 2019 16:23:57: 82000000 INFO @ Fri, 05 Jul 2019 16:23:57: 76000000 INFO @ Fri, 05 Jul 2019 16:24:04: 83000000 INFO @ Fri, 05 Jul 2019 16:24:04: 76000000 INFO @ Fri, 05 Jul 2019 16:24:05: 77000000 INFO @ Fri, 05 Jul 2019 16:24:11: 84000000 INFO @ Fri, 05 Jul 2019 16:24:14: 77000000 INFO @ Fri, 05 Jul 2019 16:24:14: 78000000 INFO @ Fri, 05 Jul 2019 16:24:18: 85000000 INFO @ Fri, 05 Jul 2019 16:24:22: 79000000 INFO @ Fri, 05 Jul 2019 16:24:23: 78000000 INFO @ Fri, 05 Jul 2019 16:24:26: 86000000 INFO @ Fri, 05 Jul 2019 16:24:30: 80000000 INFO @ Fri, 05 Jul 2019 16:24:32: 79000000 INFO @ Fri, 05 Jul 2019 16:24:33: 87000000 INFO @ Fri, 05 Jul 2019 16:24:38: 81000000 INFO @ Fri, 05 Jul 2019 16:24:40: 88000000 INFO @ Fri, 05 Jul 2019 16:24:42: 80000000 INFO @ Fri, 05 Jul 2019 16:24:46: 82000000 INFO @ Fri, 05 Jul 2019 16:24:47: 89000000 INFO @ Fri, 05 Jul 2019 16:24:51: 81000000 INFO @ Fri, 05 Jul 2019 16:24:54: 83000000 INFO @ Fri, 05 Jul 2019 16:24:54: 90000000 INFO @ Fri, 05 Jul 2019 16:25:00: 82000000 INFO @ Fri, 05 Jul 2019 16:25:02: 84000000 INFO @ Fri, 05 Jul 2019 16:25:02: 91000000 INFO @ Fri, 05 Jul 2019 16:25:09: 92000000 INFO @ Fri, 05 Jul 2019 16:25:09: 83000000 INFO @ Fri, 05 Jul 2019 16:25:10: 85000000 INFO @ Fri, 05 Jul 2019 16:25:16: 93000000 INFO @ Fri, 05 Jul 2019 16:25:18: 86000000 INFO @ Fri, 05 Jul 2019 16:25:19: 84000000 INFO @ Fri, 05 Jul 2019 16:25:23: 94000000 INFO @ Fri, 05 Jul 2019 16:25:25: 87000000 INFO @ Fri, 05 Jul 2019 16:25:28: 85000000 INFO @ Fri, 05 Jul 2019 16:25:31: 95000000 INFO @ Fri, 05 Jul 2019 16:25:33: 88000000 INFO @ Fri, 05 Jul 2019 16:25:37: 86000000 INFO @ Fri, 05 Jul 2019 16:25:39: 96000000 INFO @ Fri, 05 Jul 2019 16:25:41: 89000000 INFO @ Fri, 05 Jul 2019 16:25:46: 97000000 INFO @ Fri, 05 Jul 2019 16:25:47: 87000000 INFO @ Fri, 05 Jul 2019 16:25:49: 90000000 INFO @ Fri, 05 Jul 2019 16:25:53: 98000000 INFO @ Fri, 05 Jul 2019 16:25:56: 88000000 INFO @ Fri, 05 Jul 2019 16:25:57: 91000000 INFO @ Fri, 05 Jul 2019 16:26:00: 99000000 INFO @ Fri, 05 Jul 2019 16:26:05: 92000000 INFO @ Fri, 05 Jul 2019 16:26:05: 89000000 INFO @ Fri, 05 Jul 2019 16:26:08: 100000000 INFO @ Fri, 05 Jul 2019 16:26:13: 93000000 INFO @ Fri, 05 Jul 2019 16:26:14: 90000000 INFO @ Fri, 05 Jul 2019 16:26:15: 101000000 INFO @ Fri, 05 Jul 2019 16:26:21: 94000000 INFO @ Fri, 05 Jul 2019 16:26:23: 102000000 INFO @ Fri, 05 Jul 2019 16:26:24: 91000000 INFO @ Fri, 05 Jul 2019 16:26:29: 95000000 INFO @ Fri, 05 Jul 2019 16:26:30: 103000000 INFO @ Fri, 05 Jul 2019 16:26:33: 92000000 INFO @ Fri, 05 Jul 2019 16:26:37: 104000000 INFO @ Fri, 05 Jul 2019 16:26:37: 96000000 INFO @ Fri, 05 Jul 2019 16:26:42: 93000000 INFO @ Fri, 05 Jul 2019 16:26:44: 105000000 INFO @ Fri, 05 Jul 2019 16:26:45: 97000000 INFO @ Fri, 05 Jul 2019 16:26:52: 94000000 INFO @ Fri, 05 Jul 2019 16:26:52: 106000000 INFO @ Fri, 05 Jul 2019 16:26:53: 98000000 INFO @ Fri, 05 Jul 2019 16:26:59: 107000000 INFO @ Fri, 05 Jul 2019 16:27:01: 95000000 INFO @ Fri, 05 Jul 2019 16:27:01: 99000000 INFO @ Fri, 05 Jul 2019 16:27:06: 108000000 INFO @ Fri, 05 Jul 2019 16:27:09: 100000000 INFO @ Fri, 05 Jul 2019 16:27:10: 96000000 INFO @ Fri, 05 Jul 2019 16:27:13: 109000000 INFO @ Fri, 05 Jul 2019 16:27:17: 101000000 INFO @ Fri, 05 Jul 2019 16:27:19: 97000000 INFO @ Fri, 05 Jul 2019 16:27:21: 110000000 INFO @ Fri, 05 Jul 2019 16:27:25: 102000000 INFO @ Fri, 05 Jul 2019 16:27:28: 111000000 INFO @ Fri, 05 Jul 2019 16:27:29: 98000000 INFO @ Fri, 05 Jul 2019 16:27:34: 103000000 INFO @ Fri, 05 Jul 2019 16:27:35: 112000000 INFO @ Fri, 05 Jul 2019 16:27:38: 99000000 INFO @ Fri, 05 Jul 2019 16:27:42: 104000000 INFO @ Fri, 05 Jul 2019 16:27:42: 113000000 INFO @ Fri, 05 Jul 2019 16:27:47: 100000000 INFO @ Fri, 05 Jul 2019 16:27:50: 114000000 INFO @ Fri, 05 Jul 2019 16:27:50: 105000000 INFO @ Fri, 05 Jul 2019 16:27:57: 101000000 INFO @ Fri, 05 Jul 2019 16:27:57: 115000000 INFO @ Fri, 05 Jul 2019 16:27:58: 106000000 INFO @ Fri, 05 Jul 2019 16:28:04: 116000000 INFO @ Fri, 05 Jul 2019 16:28:06: 102000000 INFO @ Fri, 05 Jul 2019 16:28:06: 107000000 INFO @ Fri, 05 Jul 2019 16:28:11: 117000000 INFO @ Fri, 05 Jul 2019 16:28:14: 108000000 INFO @ Fri, 05 Jul 2019 16:28:16: 103000000 INFO @ Fri, 05 Jul 2019 16:28:19: 118000000 INFO @ Fri, 05 Jul 2019 16:28:22: 109000000 INFO @ Fri, 05 Jul 2019 16:28:25: 104000000 INFO @ Fri, 05 Jul 2019 16:28:26: 119000000 INFO @ Fri, 05 Jul 2019 16:28:30: 110000000 INFO @ Fri, 05 Jul 2019 16:28:33: 120000000 INFO @ Fri, 05 Jul 2019 16:28:34: 105000000 INFO @ Fri, 05 Jul 2019 16:28:38: 111000000 INFO @ Fri, 05 Jul 2019 16:28:40: 121000000 INFO @ Fri, 05 Jul 2019 16:28:43: 106000000 INFO @ Fri, 05 Jul 2019 16:28:47: 112000000 INFO @ Fri, 05 Jul 2019 16:28:48: 122000000 INFO @ Fri, 05 Jul 2019 16:28:53: 107000000 INFO @ Fri, 05 Jul 2019 16:28:55: 113000000 INFO @ Fri, 05 Jul 2019 16:28:55: 123000000 INFO @ Fri, 05 Jul 2019 16:29:02: 108000000 INFO @ Fri, 05 Jul 2019 16:29:02: 124000000 INFO @ Fri, 05 Jul 2019 16:29:03: 114000000 INFO @ Fri, 05 Jul 2019 16:29:10: 125000000 INFO @ Fri, 05 Jul 2019 16:29:11: 115000000 INFO @ Fri, 05 Jul 2019 16:29:12: 109000000 INFO @ Fri, 05 Jul 2019 16:29:17: 126000000 INFO @ Fri, 05 Jul 2019 16:29:19: 116000000 INFO @ Fri, 05 Jul 2019 16:29:21: 110000000 INFO @ Fri, 05 Jul 2019 16:29:24: 127000000 INFO @ Fri, 05 Jul 2019 16:29:27: 117000000 INFO @ Fri, 05 Jul 2019 16:29:30: 111000000 INFO @ Fri, 05 Jul 2019 16:29:31: 128000000 INFO @ Fri, 05 Jul 2019 16:29:35: 118000000 INFO @ Fri, 05 Jul 2019 16:29:39: 129000000 INFO @ Fri, 05 Jul 2019 16:29:39: 112000000 INFO @ Fri, 05 Jul 2019 16:29:43: 119000000 INFO @ Fri, 05 Jul 2019 16:29:46: 130000000 INFO @ Fri, 05 Jul 2019 16:29:49: 113000000 INFO @ Fri, 05 Jul 2019 16:29:51: 120000000 INFO @ Fri, 05 Jul 2019 16:29:54: 131000000 INFO @ Fri, 05 Jul 2019 16:29:58: 114000000 INFO @ Fri, 05 Jul 2019 16:29:59: 121000000 INFO @ Fri, 05 Jul 2019 16:30:01: 132000000 INFO @ Fri, 05 Jul 2019 16:30:07: 122000000 INFO @ Fri, 05 Jul 2019 16:30:07: 115000000 INFO @ Fri, 05 Jul 2019 16:30:08: 133000000 INFO @ Fri, 05 Jul 2019 16:30:15: 123000000 INFO @ Fri, 05 Jul 2019 16:30:16: 134000000 INFO @ Fri, 05 Jul 2019 16:30:17: 116000000 INFO @ Fri, 05 Jul 2019 16:30:23: 135000000 INFO @ Fri, 05 Jul 2019 16:30:24: 124000000 INFO @ Fri, 05 Jul 2019 16:30:26: 117000000 INFO @ Fri, 05 Jul 2019 16:30:27: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 16:30:27: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 16:30:27: #1 total tags in treatment: 135345291 INFO @ Fri, 05 Jul 2019 16:30:27: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 16:30:27: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 16:30:30: #1 tags after filtering in treatment: 135345262 INFO @ Fri, 05 Jul 2019 16:30:30: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 16:30:30: #1 finished! INFO @ Fri, 05 Jul 2019 16:30:30: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 16:30:30: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 16:30:32: 125000000 INFO @ Fri, 05 Jul 2019 16:30:35: 118000000 INFO @ Fri, 05 Jul 2019 16:30:40: 126000000 INFO @ Fri, 05 Jul 2019 16:30:43: #2 number of paired peaks: 8065 INFO @ Fri, 05 Jul 2019 16:30:43: start model_add_line... INFO @ Fri, 05 Jul 2019 16:30:45: start X-correlation... INFO @ Fri, 05 Jul 2019 16:30:45: end of X-cor INFO @ Fri, 05 Jul 2019 16:30:45: #2 finished! INFO @ Fri, 05 Jul 2019 16:30:45: #2 predicted fragment length is 119 bps INFO @ Fri, 05 Jul 2019 16:30:45: #2 alternative fragment length(s) may be 3,119 bps INFO @ Fri, 05 Jul 2019 16:30:45: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.10_model.r INFO @ Fri, 05 Jul 2019 16:30:45: #3 Call peaks... INFO @ Fri, 05 Jul 2019 16:30:45: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 16:30:45: 119000000 INFO @ Fri, 05 Jul 2019 16:30:48: 127000000 INFO @ Fri, 05 Jul 2019 16:30:54: 120000000 INFO @ Fri, 05 Jul 2019 16:30:56: 128000000 INFO @ Fri, 05 Jul 2019 16:31:04: 121000000 INFO @ Fri, 05 Jul 2019 16:31:04: 129000000 INFO @ Fri, 05 Jul 2019 16:31:12: 130000000 INFO @ Fri, 05 Jul 2019 16:31:13: 122000000 INFO @ Fri, 05 Jul 2019 16:31:20: 131000000 INFO @ Fri, 05 Jul 2019 16:31:22: 123000000 INFO @ Fri, 05 Jul 2019 16:31:28: 132000000 INFO @ Fri, 05 Jul 2019 16:31:32: 124000000 INFO @ Fri, 05 Jul 2019 16:31:36: 133000000 INFO @ Fri, 05 Jul 2019 16:31:41: 125000000 INFO @ Fri, 05 Jul 2019 16:31:45: 134000000 INFO @ Fri, 05 Jul 2019 16:31:51: 126000000 INFO @ Fri, 05 Jul 2019 16:31:53: 135000000 INFO @ Fri, 05 Jul 2019 16:31:57: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 16:31:57: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 16:31:57: #1 total tags in treatment: 135345291 INFO @ Fri, 05 Jul 2019 16:31:57: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 16:31:57: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 16:32:00: 127000000 INFO @ Fri, 05 Jul 2019 16:32:00: #1 tags after filtering in treatment: 135345262 INFO @ Fri, 05 Jul 2019 16:32:00: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 16:32:00: #1 finished! INFO @ Fri, 05 Jul 2019 16:32:00: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 16:32:00: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 16:32:09: 128000000 INFO @ Fri, 05 Jul 2019 16:32:13: #2 number of paired peaks: 8065 INFO @ Fri, 05 Jul 2019 16:32:13: start model_add_line... INFO @ Fri, 05 Jul 2019 16:32:15: start X-correlation... INFO @ Fri, 05 Jul 2019 16:32:15: end of X-cor INFO @ Fri, 05 Jul 2019 16:32:15: #2 finished! INFO @ Fri, 05 Jul 2019 16:32:15: #2 predicted fragment length is 119 bps INFO @ Fri, 05 Jul 2019 16:32:15: #2 alternative fragment length(s) may be 3,119 bps INFO @ Fri, 05 Jul 2019 16:32:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.20_model.r INFO @ Fri, 05 Jul 2019 16:32:15: #3 Call peaks... INFO @ Fri, 05 Jul 2019 16:32:15: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 16:32:18: 129000000 INFO @ Fri, 05 Jul 2019 16:32:28: 130000000 INFO @ Fri, 05 Jul 2019 16:32:37: 131000000 INFO @ Fri, 05 Jul 2019 16:32:46: 132000000 INFO @ Fri, 05 Jul 2019 16:32:55: 133000000 INFO @ Fri, 05 Jul 2019 16:33:04: 134000000 INFO @ Fri, 05 Jul 2019 16:33:14: 135000000 INFO @ Fri, 05 Jul 2019 16:33:19: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 16:33:19: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 16:33:19: #1 total tags in treatment: 135345291 INFO @ Fri, 05 Jul 2019 16:33:19: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 16:33:19: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 16:33:22: #1 tags after filtering in treatment: 135345262 INFO @ Fri, 05 Jul 2019 16:33:22: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 16:33:22: #1 finished! INFO @ Fri, 05 Jul 2019 16:33:22: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 16:33:22: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 16:33:35: #2 number of paired peaks: 8065 INFO @ Fri, 05 Jul 2019 16:33:35: start model_add_line... INFO @ Fri, 05 Jul 2019 16:33:36: start X-correlation... INFO @ Fri, 05 Jul 2019 16:33:36: end of X-cor INFO @ Fri, 05 Jul 2019 16:33:36: #2 finished! INFO @ Fri, 05 Jul 2019 16:33:36: #2 predicted fragment length is 119 bps INFO @ Fri, 05 Jul 2019 16:33:36: #2 alternative fragment length(s) may be 3,119 bps INFO @ Fri, 05 Jul 2019 16:33:36: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.05_model.r INFO @ Fri, 05 Jul 2019 16:33:36: #3 Call peaks... INFO @ Fri, 05 Jul 2019 16:33:36: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 16:37:25: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 16:38:59: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 16:40:19: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 16:40:57: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.10_peaks.xls INFO @ Fri, 05 Jul 2019 16:40:57: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 16:40:57: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.10_summits.bed INFO @ Fri, 05 Jul 2019 16:40:57: Done! pass1 - making usageList (87 chroms): 2 millis pass2 - checking and writing primary data (4468 records, 4 fields): 13 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 16:42:31: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.20_peaks.xls INFO @ Fri, 05 Jul 2019 16:42:31: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 16:42:31: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.20_summits.bed INFO @ Fri, 05 Jul 2019 16:42:31: Done! pass1 - making usageList (48 chroms): 2 millis pass2 - checking and writing primary data (870 records, 4 fields): 10 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 16:43:51: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.05_peaks.xls INFO @ Fri, 05 Jul 2019 16:43:51: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 16:43:52: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX102013/ERX102013.05_summits.bed INFO @ Fri, 05 Jul 2019 16:43:52: Done! pass1 - making usageList (159 chroms): 4 millis pass2 - checking and writing primary data (19235 records, 4 fields): 33 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。