Job ID = 2001660 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-04T22:42:41 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:58:20 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T23:18:43 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T23:24:27 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T23:24:59 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-05T00:07:44 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 179,675,908 reads read : 179,675,908 reads written : 179,675,908 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 02:55:13 179675908 reads; of these: 179675908 (100.00%) were unpaired; of these: 7430827 (4.14%) aligned 0 times 123516872 (68.74%) aligned exactly 1 time 48728209 (27.12%) aligned >1 times 95.86% overall alignment rate Time searching: 02:55:18 Overall time: 02:55:18 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 72 files... [bam_rmdupse_core] 23058595 / 172245081 = 0.1339 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 13:47:15: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 13:47:15: #1 read tag files... INFO @ Fri, 05 Jul 2019 13:47:15: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 13:47:16: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 13:47:16: #1 read tag files... INFO @ Fri, 05 Jul 2019 13:47:16: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 13:47:17: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 13:47:17: #1 read tag files... INFO @ Fri, 05 Jul 2019 13:47:17: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 13:47:24: 1000000 INFO @ Fri, 05 Jul 2019 13:47:25: 1000000 INFO @ Fri, 05 Jul 2019 13:47:26: 1000000 INFO @ Fri, 05 Jul 2019 13:47:33: 2000000 INFO @ Fri, 05 Jul 2019 13:47:34: 2000000 INFO @ Fri, 05 Jul 2019 13:47:35: 2000000 INFO @ Fri, 05 Jul 2019 13:47:42: 3000000 INFO @ Fri, 05 Jul 2019 13:47:43: 3000000 INFO @ Fri, 05 Jul 2019 13:47:43: 3000000 INFO @ Fri, 05 Jul 2019 13:47:51: 4000000 INFO @ Fri, 05 Jul 2019 13:47:53: 4000000 INFO @ Fri, 05 Jul 2019 13:47:53: 4000000 INFO @ Fri, 05 Jul 2019 13:48:00: 5000000 INFO @ Fri, 05 Jul 2019 13:48:02: 5000000 INFO @ Fri, 05 Jul 2019 13:48:02: 5000000 INFO @ Fri, 05 Jul 2019 13:48:08: 6000000 INFO @ Fri, 05 Jul 2019 13:48:10: 6000000 INFO @ Fri, 05 Jul 2019 13:48:10: 6000000 INFO @ Fri, 05 Jul 2019 13:48:17: 7000000 INFO @ Fri, 05 Jul 2019 13:48:19: 7000000 INFO @ Fri, 05 Jul 2019 13:48:19: 7000000 INFO @ Fri, 05 Jul 2019 13:48:26: 8000000 INFO @ Fri, 05 Jul 2019 13:48:28: 8000000 INFO @ Fri, 05 Jul 2019 13:48:28: 8000000 INFO @ Fri, 05 Jul 2019 13:48:34: 9000000 INFO @ Fri, 05 Jul 2019 13:48:36: 9000000 INFO @ Fri, 05 Jul 2019 13:48:37: 9000000 INFO @ Fri, 05 Jul 2019 13:48:43: 10000000 INFO @ Fri, 05 Jul 2019 13:48:45: 10000000 INFO @ Fri, 05 Jul 2019 13:48:45: 10000000 INFO @ Fri, 05 Jul 2019 13:48:51: 11000000 INFO @ Fri, 05 Jul 2019 13:48:54: 11000000 INFO @ Fri, 05 Jul 2019 13:48:54: 11000000 INFO @ Fri, 05 Jul 2019 13:49:00: 12000000 INFO @ Fri, 05 Jul 2019 13:49:02: 12000000 INFO @ Fri, 05 Jul 2019 13:49:02: 12000000 INFO @ Fri, 05 Jul 2019 13:49:08: 13000000 INFO @ Fri, 05 Jul 2019 13:49:11: 13000000 INFO @ Fri, 05 Jul 2019 13:49:11: 13000000 INFO @ Fri, 05 Jul 2019 13:49:17: 14000000 INFO @ Fri, 05 Jul 2019 13:49:19: 14000000 INFO @ Fri, 05 Jul 2019 13:49:20: 14000000 INFO @ Fri, 05 Jul 2019 13:49:25: 15000000 INFO @ Fri, 05 Jul 2019 13:49:28: 15000000 INFO @ Fri, 05 Jul 2019 13:49:28: 15000000 INFO @ Fri, 05 Jul 2019 13:49:33: 16000000 INFO @ Fri, 05 Jul 2019 13:49:37: 16000000 INFO @ Fri, 05 Jul 2019 13:49:37: 16000000 INFO @ Fri, 05 Jul 2019 13:49:42: 17000000 INFO @ Fri, 05 Jul 2019 13:49:45: 17000000 INFO @ Fri, 05 Jul 2019 13:49:46: 17000000 INFO @ Fri, 05 Jul 2019 13:49:51: 18000000 INFO @ Fri, 05 Jul 2019 13:49:54: 18000000 INFO @ Fri, 05 Jul 2019 13:49:54: 18000000 INFO @ Fri, 05 Jul 2019 13:49:59: 19000000 INFO @ Fri, 05 Jul 2019 13:50:02: 19000000 INFO @ Fri, 05 Jul 2019 13:50:03: 19000000 INFO @ Fri, 05 Jul 2019 13:50:08: 20000000 INFO @ Fri, 05 Jul 2019 13:50:10: 20000000 INFO @ Fri, 05 Jul 2019 13:50:12: 20000000 INFO @ Fri, 05 Jul 2019 13:50:17: 21000000 INFO @ Fri, 05 Jul 2019 13:50:18: 21000000 INFO @ Fri, 05 Jul 2019 13:50:20: 21000000 INFO @ Fri, 05 Jul 2019 13:50:25: 22000000 INFO @ Fri, 05 Jul 2019 13:50:26: 22000000 INFO @ Fri, 05 Jul 2019 13:50:29: 22000000 INFO @ Fri, 05 Jul 2019 13:50:35: 23000000 INFO @ Fri, 05 Jul 2019 13:50:35: 23000000 INFO @ Fri, 05 Jul 2019 13:50:38: 23000000 INFO @ Fri, 05 Jul 2019 13:50:44: 24000000 INFO @ Fri, 05 Jul 2019 13:50:44: 24000000 INFO @ Fri, 05 Jul 2019 13:50:47: 24000000 INFO @ Fri, 05 Jul 2019 13:50:53: 25000000 INFO @ Fri, 05 Jul 2019 13:50:53: 25000000 INFO @ Fri, 05 Jul 2019 13:50:55: 25000000 INFO @ Fri, 05 Jul 2019 13:51:02: 26000000 INFO @ Fri, 05 Jul 2019 13:51:02: 26000000 INFO @ Fri, 05 Jul 2019 13:51:04: 26000000 INFO @ Fri, 05 Jul 2019 13:51:11: 27000000 INFO @ Fri, 05 Jul 2019 13:51:11: 27000000 INFO @ Fri, 05 Jul 2019 13:51:13: 27000000 INFO @ Fri, 05 Jul 2019 13:51:20: 28000000 INFO @ Fri, 05 Jul 2019 13:51:21: 28000000 INFO @ Fri, 05 Jul 2019 13:51:21: 28000000 INFO @ Fri, 05 Jul 2019 13:51:29: 29000000 INFO @ Fri, 05 Jul 2019 13:51:30: 29000000 INFO @ Fri, 05 Jul 2019 13:51:30: 29000000 INFO @ Fri, 05 Jul 2019 13:51:38: 30000000 INFO @ Fri, 05 Jul 2019 13:51:39: 30000000 INFO @ Fri, 05 Jul 2019 13:51:39: 30000000 INFO @ Fri, 05 Jul 2019 13:51:46: 31000000 INFO @ Fri, 05 Jul 2019 13:51:47: 31000000 INFO @ Fri, 05 Jul 2019 13:51:48: 31000000 INFO @ Fri, 05 Jul 2019 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39000000 INFO @ Fri, 05 Jul 2019 13:53:02: 40000000 INFO @ Fri, 05 Jul 2019 13:53:05: 40000000 INFO @ Fri, 05 Jul 2019 13:53:06: 40000000 INFO @ Fri, 05 Jul 2019 13:53:10: 41000000 INFO @ Fri, 05 Jul 2019 13:53:14: 41000000 INFO @ Fri, 05 Jul 2019 13:53:15: 41000000 INFO @ Fri, 05 Jul 2019 13:53:18: 42000000 INFO @ Fri, 05 Jul 2019 13:53:22: 42000000 INFO @ Fri, 05 Jul 2019 13:53:23: 42000000 INFO @ Fri, 05 Jul 2019 13:53:27: 43000000 INFO @ Fri, 05 Jul 2019 13:53:30: 43000000 INFO @ Fri, 05 Jul 2019 13:53:32: 43000000 INFO @ Fri, 05 Jul 2019 13:53:35: 44000000 INFO @ Fri, 05 Jul 2019 13:53:39: 44000000 INFO @ Fri, 05 Jul 2019 13:53:41: 44000000 INFO @ Fri, 05 Jul 2019 13:53:43: 45000000 INFO @ Fri, 05 Jul 2019 13:53:47: 45000000 INFO @ Fri, 05 Jul 2019 13:53:49: 45000000 INFO @ Fri, 05 Jul 2019 13:53:51: 46000000 INFO @ Fri, 05 Jul 2019 13:53:56: 46000000 INFO @ Fri, 05 Jul 2019 13:53:58: 46000000 INFO @ Fri, 05 Jul 2019 13:53:59: 47000000 INFO @ Fri, 05 Jul 2019 13:54:04: 47000000 INFO @ Fri, 05 Jul 2019 13:54:07: 47000000 INFO @ Fri, 05 Jul 2019 13:54:08: 48000000 INFO @ Fri, 05 Jul 2019 13:54:12: 48000000 INFO @ Fri, 05 Jul 2019 13:54:15: 48000000 INFO @ Fri, 05 Jul 2019 13:54:16: 49000000 INFO @ Fri, 05 Jul 2019 13:54:21: 49000000 INFO @ Fri, 05 Jul 2019 13:54:24: 49000000 INFO @ Fri, 05 Jul 2019 13:54:24: 50000000 INFO @ Fri, 05 Jul 2019 13:54:29: 50000000 INFO @ Fri, 05 Jul 2019 13:54:32: 51000000 INFO @ Fri, 05 Jul 2019 13:54:33: 50000000 INFO @ Fri, 05 Jul 2019 13:54:37: 51000000 INFO @ Fri, 05 Jul 2019 13:54:41: 52000000 INFO @ Fri, 05 Jul 2019 13:54:41: 51000000 INFO @ Fri, 05 Jul 2019 13:54:46: 52000000 INFO @ Fri, 05 Jul 2019 13:54:49: 53000000 INFO @ Fri, 05 Jul 2019 13:54:50: 52000000 INFO @ Fri, 05 Jul 2019 13:54:54: 53000000 INFO @ Fri, 05 Jul 2019 13:54:57: 54000000 INFO @ Fri, 05 Jul 2019 13:54:59: 53000000 INFO @ Fri, 05 Jul 2019 13:55:03: 54000000 INFO @ Fri, 05 Jul 2019 13:55:05: 55000000 INFO @ Fri, 05 Jul 2019 13:55:07: 54000000 INFO @ Fri, 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70000000 INFO @ Fri, 05 Jul 2019 13:57:24: 70000000 INFO @ Fri, 05 Jul 2019 13:57:30: 72000000 INFO @ Fri, 05 Jul 2019 13:57:30: 71000000 INFO @ Fri, 05 Jul 2019 13:57:33: 71000000 INFO @ Fri, 05 Jul 2019 13:57:38: 73000000 INFO @ Fri, 05 Jul 2019 13:57:40: 72000000 INFO @ Fri, 05 Jul 2019 13:57:42: 72000000 INFO @ Fri, 05 Jul 2019 13:57:48: 74000000 INFO @ Fri, 05 Jul 2019 13:57:49: 73000000 INFO @ Fri, 05 Jul 2019 13:57:52: 73000000 INFO @ Fri, 05 Jul 2019 13:57:57: 74000000 INFO @ Fri, 05 Jul 2019 13:57:58: 75000000 INFO @ Fri, 05 Jul 2019 13:58:00: 74000000 INFO @ Fri, 05 Jul 2019 13:58:06: 75000000 INFO @ Fri, 05 Jul 2019 13:58:06: 76000000 INFO @ Fri, 05 Jul 2019 13:58:09: 75000000 INFO @ Fri, 05 Jul 2019 13:58:14: 76000000 INFO @ Fri, 05 Jul 2019 13:58:15: 77000000 INFO @ Fri, 05 Jul 2019 13:58:18: 76000000 INFO @ Fri, 05 Jul 2019 13:58:23: 77000000 INFO @ Fri, 05 Jul 2019 13:58:24: 78000000 INFO @ Fri, 05 Jul 2019 13:58:26: 77000000 INFO @ Fri, 05 Jul 2019 13:58:31: 78000000 INFO @ Fri, 05 Jul 2019 13:58:32: 79000000 INFO @ Fri, 05 Jul 2019 13:58:34: 78000000 INFO @ Fri, 05 Jul 2019 13:58:39: 79000000 INFO @ Fri, 05 Jul 2019 13:58:41: 80000000 INFO @ Fri, 05 Jul 2019 13:58:43: 79000000 INFO @ Fri, 05 Jul 2019 13:58:48: 80000000 INFO @ Fri, 05 Jul 2019 13:58:49: 81000000 INFO @ Fri, 05 Jul 2019 13:58:51: 80000000 INFO @ Fri, 05 Jul 2019 13:58:56: 81000000 INFO @ Fri, 05 Jul 2019 13:58:57: 82000000 INFO @ Fri, 05 Jul 2019 13:59:00: 81000000 INFO @ Fri, 05 Jul 2019 13:59:05: 82000000 INFO @ Fri, 05 Jul 2019 13:59:06: 83000000 INFO @ Fri, 05 Jul 2019 13:59:08: 82000000 INFO @ Fri, 05 Jul 2019 13:59:13: 83000000 INFO @ Fri, 05 Jul 2019 13:59:15: 84000000 INFO @ Fri, 05 Jul 2019 13:59:17: 83000000 INFO @ Fri, 05 Jul 2019 13:59:22: 84000000 INFO @ Fri, 05 Jul 2019 13:59:23: 85000000 INFO @ Fri, 05 Jul 2019 13:59:26: 84000000 INFO @ Fri, 05 Jul 2019 13:59:31: 85000000 INFO @ Fri, 05 Jul 2019 13:59:31: 86000000 INFO @ Fri, 05 Jul 2019 13:59:34: 85000000 INFO @ Fri, 05 Jul 2019 13:59:40: 86000000 INFO @ Fri, 05 Jul 2019 13:59:40: 87000000 INFO @ Fri, 05 Jul 2019 13:59:43: 86000000 INFO @ Fri, 05 Jul 2019 13:59:48: 87000000 INFO @ Fri, 05 Jul 2019 13:59:48: 88000000 INFO @ Fri, 05 Jul 2019 13:59:51: 87000000 INFO @ Fri, 05 Jul 2019 13:59:56: 88000000 INFO @ Fri, 05 Jul 2019 13:59:57: 89000000 INFO @ Fri, 05 Jul 2019 14:00:00: 88000000 INFO @ Fri, 05 Jul 2019 14:00:05: 89000000 INFO @ Fri, 05 Jul 2019 14:00:05: 90000000 INFO @ Fri, 05 Jul 2019 14:00:09: 89000000 INFO @ Fri, 05 Jul 2019 14:00:13: 90000000 INFO @ Fri, 05 Jul 2019 14:00:14: 91000000 INFO @ Fri, 05 Jul 2019 14:00:18: 90000000 INFO @ Fri, 05 Jul 2019 14:00:22: 91000000 INFO @ Fri, 05 Jul 2019 14:00:22: 92000000 INFO @ Fri, 05 Jul 2019 14:00:26: 91000000 INFO @ Fri, 05 Jul 2019 14:00:30: 92000000 INFO @ Fri, 05 Jul 2019 14:00:31: 93000000 INFO @ Fri, 05 Jul 2019 14:00:35: 92000000 INFO @ Fri, 05 Jul 2019 14:00:39: 93000000 INFO @ Fri, 05 Jul 2019 14:00:39: 94000000 INFO @ Fri, 05 Jul 2019 14:00:44: 93000000 INFO @ Fri, 05 Jul 2019 14:00:47: 94000000 INFO @ Fri, 05 Jul 2019 14:00:48: 95000000 INFO @ Fri, 05 Jul 2019 14:00:53: 94000000 INFO @ Fri, 05 Jul 2019 14:00:56: 95000000 INFO @ Fri, 05 Jul 2019 14:00:56: 96000000 INFO @ Fri, 05 Jul 2019 14:01:01: 95000000 INFO @ Fri, 05 Jul 2019 14:01:04: 96000000 INFO @ Fri, 05 Jul 2019 14:01:05: 97000000 INFO @ Fri, 05 Jul 2019 14:01:10: 96000000 INFO @ Fri, 05 Jul 2019 14:01:13: 97000000 INFO @ Fri, 05 Jul 2019 14:01:13: 98000000 INFO @ Fri, 05 Jul 2019 14:01:19: 97000000 INFO @ Fri, 05 Jul 2019 14:01:21: 98000000 INFO @ Fri, 05 Jul 2019 14:01:22: 99000000 INFO @ Fri, 05 Jul 2019 14:01:28: 98000000 INFO @ Fri, 05 Jul 2019 14:01:30: 99000000 INFO @ Fri, 05 Jul 2019 14:01:30: 100000000 INFO @ Fri, 05 Jul 2019 14:01:36: 99000000 INFO @ Fri, 05 Jul 2019 14:01:38: 100000000 INFO @ Fri, 05 Jul 2019 14:01:38: 101000000 INFO @ Fri, 05 Jul 2019 14:01:44: 100000000 INFO @ Fri, 05 Jul 2019 14:01:46: 101000000 INFO @ Fri, 05 Jul 2019 14:01:47: 102000000 INFO @ Fri, 05 Jul 2019 14:01:52: 101000000 INFO @ Fri, 05 Jul 2019 14:01:54: 102000000 INFO @ Fri, 05 Jul 2019 14:01:55: 103000000 INFO @ Fri, 05 Jul 2019 14:02:01: 102000000 INFO @ Fri, 05 Jul 2019 14:02:03: 103000000 INFO @ Fri, 05 Jul 2019 14:02:04: 104000000 INFO @ Fri, 05 Jul 2019 14:02:10: 103000000 INFO @ Fri, 05 Jul 2019 14:02:12: 104000000 INFO @ Fri, 05 Jul 2019 14:02:12: 105000000 INFO @ Fri, 05 Jul 2019 14:02:18: 104000000 INFO @ Fri, 05 Jul 2019 14:02:20: 105000000 INFO @ Fri, 05 Jul 2019 14:02:21: 106000000 INFO @ Fri, 05 Jul 2019 14:02:27: 105000000 INFO @ Fri, 05 Jul 2019 14:02:29: 106000000 INFO @ Fri, 05 Jul 2019 14:02:29: 107000000 INFO @ Fri, 05 Jul 2019 14:02:36: 106000000 INFO @ Fri, 05 Jul 2019 14:02:37: 107000000 INFO @ Fri, 05 Jul 2019 14:02:38: 108000000 INFO @ Fri, 05 Jul 2019 14:02:44: 107000000 INFO @ Fri, 05 Jul 2019 14:02:46: 108000000 INFO @ Fri, 05 Jul 2019 14:02:47: 109000000 INFO @ Fri, 05 Jul 2019 14:02:52: 108000000 INFO @ Fri, 05 Jul 2019 14:02:54: 109000000 INFO @ Fri, 05 Jul 2019 14:02:56: 110000000 INFO @ Fri, 05 Jul 2019 14:03:01: 109000000 INFO @ Fri, 05 Jul 2019 14:03:02: 110000000 INFO @ Fri, 05 Jul 2019 14:03:04: 111000000 INFO @ Fri, 05 Jul 2019 14:03:10: 110000000 INFO @ Fri, 05 Jul 2019 14:03:11: 111000000 INFO @ Fri, 05 Jul 2019 14:03:14: 112000000 INFO @ Fri, 05 Jul 2019 14:03:18: 111000000 INFO @ Fri, 05 Jul 2019 14:03:20: 112000000 INFO @ Fri, 05 Jul 2019 14:03:23: 113000000 INFO @ Fri, 05 Jul 2019 14:03:27: 112000000 INFO @ Fri, 05 Jul 2019 14:03:29: 113000000 INFO @ Fri, 05 Jul 2019 14:03:31: 114000000 INFO @ Fri, 05 Jul 2019 14:03:37: 113000000 INFO @ Fri, 05 Jul 2019 14:03:38: 114000000 INFO @ Fri, 05 Jul 2019 14:03:40: 115000000 INFO @ Fri, 05 Jul 2019 14:03:46: 114000000 INFO @ Fri, 05 Jul 2019 14:03:46: 115000000 INFO @ Fri, 05 Jul 2019 14:03:48: 116000000 INFO @ Fri, 05 Jul 2019 14:03:54: 115000000 INFO @ Fri, 05 Jul 2019 14:03:55: 116000000 INFO @ Fri, 05 Jul 2019 14:03:57: 117000000 INFO @ Fri, 05 Jul 2019 14:04:03: 117000000 INFO @ Fri, 05 Jul 2019 14:04:03: 116000000 INFO @ Fri, 05 Jul 2019 14:04:05: 118000000 INFO @ Fri, 05 Jul 2019 14:04:10: 118000000 INFO @ Fri, 05 Jul 2019 14:04:11: 117000000 INFO @ Fri, 05 Jul 2019 14:04:13: 119000000 INFO @ Fri, 05 Jul 2019 14:04:19: 118000000 INFO @ Fri, 05 Jul 2019 14:04:19: 119000000 INFO @ Fri, 05 Jul 2019 14:04:22: 120000000 INFO @ Fri, 05 Jul 2019 14:04:28: 119000000 INFO @ Fri, 05 Jul 2019 14:04:28: 120000000 INFO @ Fri, 05 Jul 2019 14:04:30: 121000000 INFO @ Fri, 05 Jul 2019 14:04:36: 121000000 INFO @ Fri, 05 Jul 2019 14:04:36: 120000000 INFO @ Fri, 05 Jul 2019 14:04:39: 122000000 INFO @ Fri, 05 Jul 2019 14:04:44: 122000000 INFO @ Fri, 05 Jul 2019 14:04:45: 121000000 INFO @ Fri, 05 Jul 2019 14:04:47: 123000000 INFO @ Fri, 05 Jul 2019 14:04:53: 123000000 INFO @ Fri, 05 Jul 2019 14:04:55: 122000000 INFO @ Fri, 05 Jul 2019 14:04:55: 124000000 INFO @ Fri, 05 Jul 2019 14:05:01: 124000000 INFO @ Fri, 05 Jul 2019 14:05:03: 123000000 INFO @ Fri, 05 Jul 2019 14:05:04: 125000000 INFO @ Fri, 05 Jul 2019 14:05:09: 125000000 INFO @ Fri, 05 Jul 2019 14:05:11: 124000000 INFO @ Fri, 05 Jul 2019 14:05:12: 126000000 INFO @ Fri, 05 Jul 2019 14:05:17: 126000000 INFO @ Fri, 05 Jul 2019 14:05:20: 125000000 INFO @ Fri, 05 Jul 2019 14:05:20: 127000000 INFO @ Fri, 05 Jul 2019 14:05:26: 127000000 INFO @ Fri, 05 Jul 2019 14:05:28: 126000000 INFO @ Fri, 05 Jul 2019 14:05:28: 128000000 INFO @ Fri, 05 Jul 2019 14:05:34: 128000000 INFO @ Fri, 05 Jul 2019 14:05:36: 127000000 INFO @ Fri, 05 Jul 2019 14:05:36: 129000000 INFO @ Fri, 05 Jul 2019 14:05:42: 129000000 INFO @ Fri, 05 Jul 2019 14:05:44: 130000000 INFO @ Fri, 05 Jul 2019 14:05:45: 128000000 INFO @ Fri, 05 Jul 2019 14:05:51: 130000000 INFO @ Fri, 05 Jul 2019 14:05:52: 131000000 INFO @ Fri, 05 Jul 2019 14:05:53: 129000000 INFO @ Fri, 05 Jul 2019 14:05:58: 131000000 INFO @ Fri, 05 Jul 2019 14:06:00: 132000000 INFO @ Fri, 05 Jul 2019 14:06:01: 130000000 INFO @ Fri, 05 Jul 2019 14:06:06: 132000000 INFO @ Fri, 05 Jul 2019 14:06:08: 133000000 INFO @ Fri, 05 Jul 2019 14:06:09: 131000000 INFO @ Fri, 05 Jul 2019 14:06:15: 133000000 INFO @ Fri, 05 Jul 2019 14:06:16: 134000000 INFO @ Fri, 05 Jul 2019 14:06:17: 132000000 INFO @ Fri, 05 Jul 2019 14:06:23: 134000000 INFO @ Fri, 05 Jul 2019 14:06:25: 135000000 INFO @ Fri, 05 Jul 2019 14:06:26: 133000000 INFO @ Fri, 05 Jul 2019 14:06:31: 135000000 INFO @ Fri, 05 Jul 2019 14:06:33: 136000000 INFO @ Fri, 05 Jul 2019 14:06:34: 134000000 INFO @ Fri, 05 Jul 2019 14:06:40: 136000000 INFO @ Fri, 05 Jul 2019 14:06:41: 137000000 INFO @ Fri, 05 Jul 2019 14:06:42: 135000000 INFO @ Fri, 05 Jul 2019 14:06:48: 137000000 INFO @ Fri, 05 Jul 2019 14:06:49: 138000000 INFO @ Fri, 05 Jul 2019 14:06:51: 136000000 INFO @ Fri, 05 Jul 2019 14:06:56: 138000000 INFO @ Fri, 05 Jul 2019 14:06:57: 139000000 INFO @ Fri, 05 Jul 2019 14:07:00: 137000000 INFO @ Fri, 05 Jul 2019 14:07:05: 139000000 INFO @ Fri, 05 Jul 2019 14:07:06: 140000000 INFO @ Fri, 05 Jul 2019 14:07:08: 138000000 INFO @ Fri, 05 Jul 2019 14:07:13: 140000000 INFO @ Fri, 05 Jul 2019 14:07:14: 141000000 INFO @ Fri, 05 Jul 2019 14:07:17: 139000000 INFO @ Fri, 05 Jul 2019 14:07:21: 141000000 INFO @ Fri, 05 Jul 2019 14:07:22: 142000000 INFO @ Fri, 05 Jul 2019 14:07:25: 140000000 INFO @ Fri, 05 Jul 2019 14:07:29: 142000000 INFO @ Fri, 05 Jul 2019 14:07:30: 143000000 INFO @ Fri, 05 Jul 2019 14:07:33: 141000000 INFO @ Fri, 05 Jul 2019 14:07:37: 143000000 INFO @ Fri, 05 Jul 2019 14:07:38: 144000000 INFO @ Fri, 05 Jul 2019 14:07:41: 142000000 INFO @ Fri, 05 Jul 2019 14:07:46: 144000000 INFO @ Fri, 05 Jul 2019 14:07:46: 145000000 INFO @ Fri, 05 Jul 2019 14:07:50: 143000000 INFO @ Fri, 05 Jul 2019 14:07:54: 145000000 INFO @ Fri, 05 Jul 2019 14:07:54: 146000000 INFO @ Fri, 05 Jul 2019 14:07:58: 144000000 INFO @ Fri, 05 Jul 2019 14:08:02: 146000000 INFO @ Fri, 05 Jul 2019 14:08:02: 147000000 INFO @ Fri, 05 Jul 2019 14:08:07: 145000000 INFO @ Fri, 05 Jul 2019 14:08:11: 148000000 INFO @ Fri, 05 Jul 2019 14:08:11: 147000000 INFO @ Fri, 05 Jul 2019 14:08:15: 146000000 INFO @ Fri, 05 Jul 2019 14:08:19: 149000000 INFO @ Fri, 05 Jul 2019 14:08:19: 148000000 INFO @ Fri, 05 Jul 2019 14:08:22: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 14:08:22: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 14:08:22: #1 total tags in treatment: 149186486 INFO @ Fri, 05 Jul 2019 14:08:22: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 14:08:22: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 14:08:25: 147000000 INFO @ Fri, 05 Jul 2019 14:08:25: #1 tags after filtering in treatment: 149186452 INFO @ Fri, 05 Jul 2019 14:08:25: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 14:08:25: #1 finished! INFO @ Fri, 05 Jul 2019 14:08:25: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 14:08:25: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 14:08:27: 149000000 INFO @ Fri, 05 Jul 2019 14:08:30: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 14:08:30: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 14:08:30: #1 total tags in treatment: 149186486 INFO @ Fri, 05 Jul 2019 14:08:30: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 14:08:30: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 14:08:33: 148000000 INFO @ Fri, 05 Jul 2019 14:08:34: #1 tags after filtering in treatment: 149186452 INFO @ Fri, 05 Jul 2019 14:08:34: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 14:08:34: #1 finished! INFO @ Fri, 05 Jul 2019 14:08:34: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 14:08:34: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 14:08:40: #2 number of paired peaks: 7161 INFO @ Fri, 05 Jul 2019 14:08:40: start model_add_line... INFO @ Fri, 05 Jul 2019 14:08:41: start X-correlation... INFO @ Fri, 05 Jul 2019 14:08:41: end of X-cor INFO @ Fri, 05 Jul 2019 14:08:41: #2 finished! INFO @ Fri, 05 Jul 2019 14:08:41: #2 predicted fragment length is 112 bps INFO @ Fri, 05 Jul 2019 14:08:41: #2 alternative fragment length(s) may be 4,112 bps INFO @ Fri, 05 Jul 2019 14:08:41: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.10_model.r INFO @ Fri, 05 Jul 2019 14:08:41: #3 Call peaks... INFO @ Fri, 05 Jul 2019 14:08:41: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 14:08:42: 149000000 INFO @ Fri, 05 Jul 2019 14:08:45: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 14:08:45: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 14:08:45: #1 total tags in treatment: 149186486 INFO @ Fri, 05 Jul 2019 14:08:45: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 14:08:45: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 14:08:48: #2 number of paired peaks: 7161 INFO @ Fri, 05 Jul 2019 14:08:48: start model_add_line... INFO @ Fri, 05 Jul 2019 14:08:48: #1 tags after filtering in treatment: 149186452 INFO @ Fri, 05 Jul 2019 14:08:48: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 14:08:48: #1 finished! INFO @ Fri, 05 Jul 2019 14:08:48: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 14:08:48: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 14:08:49: start X-correlation... INFO @ Fri, 05 Jul 2019 14:08:49: end of X-cor INFO @ Fri, 05 Jul 2019 14:08:49: #2 finished! INFO @ Fri, 05 Jul 2019 14:08:49: #2 predicted fragment length is 112 bps INFO @ Fri, 05 Jul 2019 14:08:49: #2 alternative fragment length(s) may be 4,112 bps INFO @ Fri, 05 Jul 2019 14:08:49: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.20_model.r INFO @ Fri, 05 Jul 2019 14:08:49: #3 Call peaks... INFO @ Fri, 05 Jul 2019 14:08:49: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 14:09:02: #2 number of paired peaks: 7161 INFO @ Fri, 05 Jul 2019 14:09:02: start model_add_line... INFO @ Fri, 05 Jul 2019 14:09:04: start X-correlation... INFO @ Fri, 05 Jul 2019 14:09:04: end of X-cor INFO @ Fri, 05 Jul 2019 14:09:04: #2 finished! INFO @ Fri, 05 Jul 2019 14:09:04: #2 predicted fragment length is 112 bps INFO @ Fri, 05 Jul 2019 14:09:04: #2 alternative fragment length(s) may be 4,112 bps INFO @ Fri, 05 Jul 2019 14:09:04: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.05_model.r INFO @ Fri, 05 Jul 2019 14:09:04: #3 Call peaks... INFO @ Fri, 05 Jul 2019 14:09:04: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 14:16:03: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 14:16:19: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 14:16:26: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 14:19:53: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.10_peaks.xls INFO @ Fri, 05 Jul 2019 14:19:53: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 14:19:53: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.10_summits.bed INFO @ Fri, 05 Jul 2019 14:19:53: Done! pass1 - making usageList (87 chroms): 4 millis pass2 - checking and writing primary data (5140 records, 4 fields): 16 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 14:20:15: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.20_peaks.xls INFO @ Fri, 05 Jul 2019 14:20:16: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 14:20:16: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.20_summits.bed INFO @ Fri, 05 Jul 2019 14:20:16: Done! pass1 - making usageList (49 chroms): 2 millis pass2 - checking and writing primary data (987 records, 4 fields): 11 millis INFO @ Fri, 05 Jul 2019 14:20:19: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.05_peaks.xls INFO @ Fri, 05 Jul 2019 14:20:19: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 14:20:19: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101975/ERX101975.05_summits.bed INFO @ Fri, 05 Jul 2019 14:20:19: Done! pass1 - making usageList (147 chroms): 9 millis pass2 - checking and writing primary data (20758 records, 4 fields): 31 millis CompletedMACS2peakCalling CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。