Job ID = 2001642 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-04T21:52:06 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:04:55 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:06:05 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:06:05 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:08:09 fasterq-dump.2.9.6 sys: error unknown while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:09:24 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:10:08 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:13:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:15:00 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 87,834,872 reads read : 87,834,872 reads written : 87,834,872 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 01:24:12 87834872 reads; of these: 87834872 (100.00%) were unpaired; of these: 1903975 (2.17%) aligned 0 times 71931880 (81.89%) aligned exactly 1 time 13999017 (15.94%) aligned >1 times 97.83% overall alignment rate Time searching: 01:24:13 Overall time: 01:24:13 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 36 files... [bam_rmdupse_core] 24480747 / 85930897 = 0.2849 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 09:14:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:14:40: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:14:40: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:14:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:14:40: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:14:40: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:14:40: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:14:40: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:14:40: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:14:47: 1000000 INFO @ Fri, 05 Jul 2019 09:14:48: 1000000 INFO @ Fri, 05 Jul 2019 09:14:49: 1000000 INFO @ Fri, 05 Jul 2019 09:14:54: 2000000 INFO @ Fri, 05 Jul 2019 09:14:56: 2000000 INFO @ Fri, 05 Jul 2019 09:14:57: 2000000 INFO @ Fri, 05 Jul 2019 09:15:00: 3000000 INFO @ Fri, 05 Jul 2019 09:15:04: 3000000 INFO @ Fri, 05 Jul 2019 09:15:05: 3000000 INFO @ Fri, 05 Jul 2019 09:15:07: 4000000 INFO @ Fri, 05 Jul 2019 09:15:12: 4000000 INFO @ Fri, 05 Jul 2019 09:15:13: 4000000 INFO @ Fri, 05 Jul 2019 09:15:14: 5000000 INFO @ Fri, 05 Jul 2019 09:15:20: 5000000 INFO @ Fri, 05 Jul 2019 09:15:20: 6000000 INFO @ Fri, 05 Jul 2019 09:15:21: 5000000 INFO @ Fri, 05 Jul 2019 09:15:27: 7000000 INFO @ Fri, 05 Jul 2019 09:15:28: 6000000 INFO @ Fri, 05 Jul 2019 09:15:29: 6000000 INFO @ Fri, 05 Jul 2019 09:15:33: 8000000 INFO @ Fri, 05 Jul 2019 09:15:36: 7000000 INFO @ Fri, 05 Jul 2019 09:15:37: 7000000 INFO @ Fri, 05 Jul 2019 09:15:40: 9000000 INFO @ Fri, 05 Jul 2019 09:15:44: 8000000 INFO @ Fri, 05 Jul 2019 09:15:46: 8000000 INFO @ Fri, 05 Jul 2019 09:15:47: 10000000 INFO @ Fri, 05 Jul 2019 09:15:51: 9000000 INFO @ Fri, 05 Jul 2019 09:15:53: 11000000 INFO @ Fri, 05 Jul 2019 09:15:54: 9000000 INFO @ Fri, 05 Jul 2019 09:15:59: 10000000 INFO @ Fri, 05 Jul 2019 09:16:00: 12000000 INFO @ Fri, 05 Jul 2019 09:16:02: 10000000 INFO @ Fri, 05 Jul 2019 09:16:07: 13000000 INFO @ Fri, 05 Jul 2019 09:16:07: 11000000 INFO @ Fri, 05 Jul 2019 09:16:10: 11000000 INFO @ Fri, 05 Jul 2019 09:16:13: 14000000 INFO @ Fri, 05 Jul 2019 09:16:15: 12000000 INFO @ Fri, 05 Jul 2019 09:16:18: 12000000 INFO @ Fri, 05 Jul 2019 09:16:20: 15000000 INFO @ Fri, 05 Jul 2019 09:16:24: 13000000 INFO @ Fri, 05 Jul 2019 09:16:26: 16000000 INFO @ Fri, 05 Jul 2019 09:16:26: 13000000 INFO @ Fri, 05 Jul 2019 09:16:31: 14000000 INFO @ Fri, 05 Jul 2019 09:16:33: 17000000 INFO @ Fri, 05 Jul 2019 09:16:35: 14000000 INFO @ Fri, 05 Jul 2019 09:16:39: 15000000 INFO @ Fri, 05 Jul 2019 09:16:40: 18000000 INFO @ Fri, 05 Jul 2019 09:16:43: 15000000 INFO @ Fri, 05 Jul 2019 09:16:46: 19000000 INFO @ Fri, 05 Jul 2019 09:16:47: 16000000 INFO @ Fri, 05 Jul 2019 09:16:51: 16000000 INFO @ Fri, 05 Jul 2019 09:16:53: 20000000 INFO @ Fri, 05 Jul 2019 09:16:55: 17000000 INFO @ Fri, 05 Jul 2019 09:16:59: 17000000 INFO @ Fri, 05 Jul 2019 09:17:02: 21000000 INFO @ Fri, 05 Jul 2019 09:17:03: 18000000 INFO @ Fri, 05 Jul 2019 09:17:07: 18000000 INFO @ Fri, 05 Jul 2019 09:17:09: 22000000 INFO @ Fri, 05 Jul 2019 09:17:10: 19000000 INFO @ Fri, 05 Jul 2019 09:17:15: 19000000 INFO @ Fri, 05 Jul 2019 09:17:16: 23000000 INFO @ Fri, 05 Jul 2019 09:17:18: 20000000 INFO @ Fri, 05 Jul 2019 09:17:23: 24000000 INFO @ Fri, 05 Jul 2019 09:17:23: 20000000 INFO @ Fri, 05 Jul 2019 09:17:26: 21000000 INFO @ Fri, 05 Jul 2019 09:17:30: 25000000 INFO @ Fri, 05 Jul 2019 09:17:31: 21000000 INFO @ Fri, 05 Jul 2019 09:17:34: 22000000 INFO @ Fri, 05 Jul 2019 09:17:36: 26000000 INFO @ Fri, 05 Jul 2019 09:17:40: 22000000 INFO @ Fri, 05 Jul 2019 09:17:42: 23000000 INFO @ Fri, 05 Jul 2019 09:17:43: 27000000 INFO @ Fri, 05 Jul 2019 09:17:48: 23000000 INFO @ Fri, 05 Jul 2019 09:17:49: 24000000 INFO @ Fri, 05 Jul 2019 09:17:50: 28000000 INFO @ Fri, 05 Jul 2019 09:17:56: 24000000 INFO @ Fri, 05 Jul 2019 09:17:57: 25000000 INFO @ Fri, 05 Jul 2019 09:17:57: 29000000 INFO @ Fri, 05 Jul 2019 09:18:04: 25000000 INFO @ Fri, 05 Jul 2019 09:18:04: 30000000 INFO @ Fri, 05 Jul 2019 09:18:05: 26000000 INFO @ Fri, 05 Jul 2019 09:18:11: 31000000 INFO @ Fri, 05 Jul 2019 09:18:12: 26000000 INFO @ Fri, 05 Jul 2019 09:18:13: 27000000 INFO @ Fri, 05 Jul 2019 09:18:19: 32000000 INFO @ Fri, 05 Jul 2019 09:18:20: 27000000 INFO @ Fri, 05 Jul 2019 09:18:21: 28000000 INFO @ Fri, 05 Jul 2019 09:18:26: 33000000 INFO @ Fri, 05 Jul 2019 09:18:29: 28000000 INFO @ Fri, 05 Jul 2019 09:18:29: 29000000 INFO @ Fri, 05 Jul 2019 09:18:32: 34000000 INFO @ Fri, 05 Jul 2019 09:18:37: 29000000 INFO @ Fri, 05 Jul 2019 09:18:38: 30000000 INFO @ Fri, 05 Jul 2019 09:18:39: 35000000 INFO @ Fri, 05 Jul 2019 09:18:45: 30000000 INFO @ Fri, 05 Jul 2019 09:18:46: 36000000 INFO @ Fri, 05 Jul 2019 09:18:46: 31000000 INFO @ Fri, 05 Jul 2019 09:18:52: 37000000 INFO @ Fri, 05 Jul 2019 09:18:53: 31000000 INFO @ Fri, 05 Jul 2019 09:18:55: 32000000 INFO @ Fri, 05 Jul 2019 09:18:59: 38000000 INFO @ Fri, 05 Jul 2019 09:19:01: 32000000 INFO @ Fri, 05 Jul 2019 09:19:03: 33000000 INFO @ Fri, 05 Jul 2019 09:19:06: 39000000 INFO @ Fri, 05 Jul 2019 09:19:09: 33000000 INFO @ Fri, 05 Jul 2019 09:19:11: 34000000 INFO @ Fri, 05 Jul 2019 09:19:12: 40000000 INFO @ Fri, 05 Jul 2019 09:19:17: 34000000 INFO @ Fri, 05 Jul 2019 09:19:19: 41000000 INFO @ Fri, 05 Jul 2019 09:19:19: 35000000 INFO @ Fri, 05 Jul 2019 09:19:25: 35000000 INFO @ Fri, 05 Jul 2019 09:19:26: 42000000 INFO @ Fri, 05 Jul 2019 09:19:27: 36000000 INFO @ Fri, 05 Jul 2019 09:19:33: 43000000 INFO @ Fri, 05 Jul 2019 09:19:33: 36000000 INFO @ Fri, 05 Jul 2019 09:19:36: 37000000 INFO @ Fri, 05 Jul 2019 09:19:39: 44000000 INFO @ Fri, 05 Jul 2019 09:19:41: 37000000 INFO @ Fri, 05 Jul 2019 09:19:44: 38000000 INFO @ Fri, 05 Jul 2019 09:19:46: 45000000 INFO @ Fri, 05 Jul 2019 09:19:50: 38000000 INFO @ Fri, 05 Jul 2019 09:19:52: 39000000 INFO @ Fri, 05 Jul 2019 09:19:53: 46000000 INFO @ Fri, 05 Jul 2019 09:19:58: 39000000 INFO @ Fri, 05 Jul 2019 09:19:59: 47000000 INFO @ Fri, 05 Jul 2019 09:20:01: 40000000 INFO @ Fri, 05 Jul 2019 09:20:06: 40000000 INFO @ Fri, 05 Jul 2019 09:20:06: 48000000 INFO @ Fri, 05 Jul 2019 09:20:09: 41000000 INFO @ Fri, 05 Jul 2019 09:20:13: 49000000 INFO @ Fri, 05 Jul 2019 09:20:14: 41000000 INFO @ Fri, 05 Jul 2019 09:20:17: 42000000 INFO @ Fri, 05 Jul 2019 09:20:19: 50000000 INFO @ Fri, 05 Jul 2019 09:20:22: 42000000 INFO @ Fri, 05 Jul 2019 09:20:25: 43000000 INFO @ Fri, 05 Jul 2019 09:20:26: 51000000 INFO @ Fri, 05 Jul 2019 09:20:30: 43000000 INFO @ Fri, 05 Jul 2019 09:20:33: 52000000 INFO @ Fri, 05 Jul 2019 09:20:33: 44000000 INFO @ Fri, 05 Jul 2019 09:20:39: 44000000 INFO @ Fri, 05 Jul 2019 09:20:39: 53000000 INFO @ Fri, 05 Jul 2019 09:20:42: 45000000 INFO @ Fri, 05 Jul 2019 09:20:46: 54000000 INFO @ Fri, 05 Jul 2019 09:20:47: 45000000 INFO @ Fri, 05 Jul 2019 09:20:51: 46000000 INFO @ Fri, 05 Jul 2019 09:20:53: 55000000 INFO @ Fri, 05 Jul 2019 09:20:55: 46000000 INFO @ Fri, 05 Jul 2019 09:20:59: 47000000 INFO @ Fri, 05 Jul 2019 09:21:00: 56000000 INFO @ Fri, 05 Jul 2019 09:21:03: 47000000 INFO @ Fri, 05 Jul 2019 09:21:07: 57000000 INFO @ Fri, 05 Jul 2019 09:21:07: 48000000 INFO @ Fri, 05 Jul 2019 09:21:11: 48000000 INFO @ Fri, 05 Jul 2019 09:21:14: 58000000 INFO @ Fri, 05 Jul 2019 09:21:15: 49000000 INFO @ Fri, 05 Jul 2019 09:21:20: 49000000 INFO @ Fri, 05 Jul 2019 09:21:21: 59000000 INFO @ Fri, 05 Jul 2019 09:21:24: 50000000 INFO @ Fri, 05 Jul 2019 09:21:28: 50000000 INFO @ Fri, 05 Jul 2019 09:21:28: 60000000 INFO @ Fri, 05 Jul 2019 09:21:32: 51000000 INFO @ Fri, 05 Jul 2019 09:21:35: 61000000 INFO @ Fri, 05 Jul 2019 09:21:36: 51000000 INFO @ Fri, 05 Jul 2019 09:21:39: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 09:21:39: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 09:21:39: #1 total tags in treatment: 61450150 INFO @ Fri, 05 Jul 2019 09:21:39: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 09:21:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 09:21:40: 52000000 INFO @ Fri, 05 Jul 2019 09:21:40: #1 tags after filtering in treatment: 61450030 INFO @ Fri, 05 Jul 2019 09:21:40: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 09:21:40: #1 finished! INFO @ Fri, 05 Jul 2019 09:21:40: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 09:21:40: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 09:21:44: 52000000 INFO @ Fri, 05 Jul 2019 09:21:48: 53000000 INFO @ Fri, 05 Jul 2019 09:21:52: 53000000 INFO @ Fri, 05 Jul 2019 09:21:52: #2 number of paired peaks: 112601 INFO @ Fri, 05 Jul 2019 09:21:52: start model_add_line... INFO @ Fri, 05 Jul 2019 09:21:54: start X-correlation... INFO @ Fri, 05 Jul 2019 09:21:54: end of X-cor INFO @ Fri, 05 Jul 2019 09:21:54: #2 finished! INFO @ Fri, 05 Jul 2019 09:21:54: #2 predicted fragment length is 123 bps INFO @ Fri, 05 Jul 2019 09:21:54: #2 alternative fragment length(s) may be 123 bps INFO @ Fri, 05 Jul 2019 09:21:54: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.10_model.r INFO @ Fri, 05 Jul 2019 09:21:54: #3 Call peaks... INFO @ Fri, 05 Jul 2019 09:21:54: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 09:21:57: 54000000 INFO @ Fri, 05 Jul 2019 09:22:00: 54000000 INFO @ Fri, 05 Jul 2019 09:22:05: 55000000 INFO @ Fri, 05 Jul 2019 09:22:08: 55000000 INFO @ Fri, 05 Jul 2019 09:22:14: 56000000 INFO @ Fri, 05 Jul 2019 09:22:16: 56000000 INFO @ Fri, 05 Jul 2019 09:22:22: 57000000 INFO @ Fri, 05 Jul 2019 09:22:25: 57000000 INFO @ Fri, 05 Jul 2019 09:22:30: 58000000 INFO @ Fri, 05 Jul 2019 09:22:33: 58000000 INFO @ Fri, 05 Jul 2019 09:22:38: 59000000 INFO @ Fri, 05 Jul 2019 09:22:41: 59000000 INFO @ Fri, 05 Jul 2019 09:22:46: 60000000 INFO @ Fri, 05 Jul 2019 09:22:49: 60000000 INFO @ Fri, 05 Jul 2019 09:22:55: 61000000 INFO @ Fri, 05 Jul 2019 09:22:58: 61000000 INFO @ Fri, 05 Jul 2019 09:22:59: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 09:22:59: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 09:22:59: #1 total tags in treatment: 61450150 INFO @ Fri, 05 Jul 2019 09:22:59: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 09:22:59: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 09:23:01: #1 tags after filtering in treatment: 61450030 INFO @ Fri, 05 Jul 2019 09:23:01: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 09:23:01: #1 finished! INFO @ Fri, 05 Jul 2019 09:23:01: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 09:23:01: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 09:23:02: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 09:23:02: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 09:23:02: #1 total tags in treatment: 61450150 INFO @ Fri, 05 Jul 2019 09:23:02: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 09:23:02: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 09:23:04: #1 tags after filtering in treatment: 61450030 INFO @ Fri, 05 Jul 2019 09:23:04: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 09:23:04: #1 finished! INFO @ Fri, 05 Jul 2019 09:23:04: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 09:23:04: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 09:23:13: #2 number of paired peaks: 112601 INFO @ Fri, 05 Jul 2019 09:23:13: start model_add_line... INFO @ Fri, 05 Jul 2019 09:23:14: start X-correlation... INFO @ Fri, 05 Jul 2019 09:23:14: end of X-cor INFO @ Fri, 05 Jul 2019 09:23:14: #2 finished! INFO @ Fri, 05 Jul 2019 09:23:14: #2 predicted fragment length is 123 bps INFO @ Fri, 05 Jul 2019 09:23:14: #2 alternative fragment length(s) may be 123 bps INFO @ Fri, 05 Jul 2019 09:23:14: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.05_model.r INFO @ Fri, 05 Jul 2019 09:23:14: #3 Call peaks... INFO @ Fri, 05 Jul 2019 09:23:14: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 09:23:16: #2 number of paired peaks: 112601 INFO @ Fri, 05 Jul 2019 09:23:16: start model_add_line... INFO @ Fri, 05 Jul 2019 09:23:17: start X-correlation... INFO @ Fri, 05 Jul 2019 09:23:17: end of X-cor INFO @ Fri, 05 Jul 2019 09:23:17: #2 finished! INFO @ Fri, 05 Jul 2019 09:23:17: #2 predicted fragment length is 123 bps INFO @ Fri, 05 Jul 2019 09:23:17: #2 alternative fragment length(s) may be 123 bps INFO @ Fri, 05 Jul 2019 09:23:17: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.20_model.r INFO @ Fri, 05 Jul 2019 09:23:17: #3 Call peaks... INFO @ Fri, 05 Jul 2019 09:23:17: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 09:25:03: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 09:26:23: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 09:26:28: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 09:26:42: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.10_peaks.xls INFO @ Fri, 05 Jul 2019 09:26:42: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 09:26:42: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.10_summits.bed INFO @ Fri, 05 Jul 2019 09:26:43: Done! pass1 - making usageList (91 chroms): 7 millis pass2 - checking and writing primary data (18609 records, 4 fields): 30 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 09:28:05: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.05_peaks.xls INFO @ Fri, 05 Jul 2019 09:28:05: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 09:28:06: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.05_summits.bed INFO @ Fri, 05 Jul 2019 09:28:06: Done! INFO @ Fri, 05 Jul 2019 09:28:07: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.20_peaks.xls INFO @ Fri, 05 Jul 2019 09:28:07: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 09:28:07: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101957/ERX101957.20_summits.bed INFO @ Fri, 05 Jul 2019 09:28:07: Done! pass1 - making usageList (41 chroms): 2 millis pass2 - checking and writing primary data (2665 records, 4 fields): 6 millis CompletedMACS2peakCalling pass1 - making usageList (155 chroms): 17 millis pass2 - checking and writing primary data (70715 records, 4 fields): 88 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。