Job ID = 2001623 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-04T22:05:28 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:07:09 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:07:53 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:07:59 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:11:33 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:11:45 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:12:16 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:12:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:13:41 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:15:00 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:23:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T22:24:34 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 187,847,137 reads read : 187,847,137 reads written : 187,847,137 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:01 Time loading mirror index: 00:00:01 Multiseed full-index search: 03:03:26 187847137 reads; of these: 187847137 (100.00%) were unpaired; of these: 4273913 (2.28%) aligned 0 times 131093612 (69.79%) aligned exactly 1 time 52479612 (27.94%) aligned >1 times 97.72% overall alignment rate Time searching: 03:03:29 Overall time: 03:03:29 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 76 files... [bam_rmdupse_core] 29374673 / 183573224 = 0.1600 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 12:42:02: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 12:42:02: #1 read tag files... INFO @ Fri, 05 Jul 2019 12:42:02: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 12:42:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 12:42:03: #1 read tag files... INFO @ Fri, 05 Jul 2019 12:42:03: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 12:42:04: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 12:42:04: #1 read tag files... INFO @ Fri, 05 Jul 2019 12:42:04: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 12:42:12: 1000000 INFO @ Fri, 05 Jul 2019 12:42:13: 1000000 INFO @ Fri, 05 Jul 2019 12:42:13: 1000000 INFO @ Fri, 05 Jul 2019 12:42:20: 2000000 INFO @ Fri, 05 Jul 2019 12:42:23: 2000000 INFO @ Fri, 05 Jul 2019 12:42:23: 2000000 INFO @ Fri, 05 Jul 2019 12:42:28: 3000000 INFO @ Fri, 05 Jul 2019 12:42:30: 3000000 INFO @ Fri, 05 Jul 2019 12:42:30: 3000000 INFO @ Fri, 05 Jul 2019 12:42:37: 4000000 INFO @ Fri, 05 Jul 2019 12:42:38: 4000000 INFO @ Fri, 05 Jul 2019 12:42:38: 4000000 INFO @ Fri, 05 Jul 2019 12:42:47: 5000000 INFO @ Fri, 05 Jul 2019 12:42:47: 5000000 INFO @ Fri, 05 Jul 2019 12:42:47: 5000000 INFO @ Fri, 05 Jul 2019 12:42:55: 6000000 INFO @ Fri, 05 Jul 2019 12:42:56: 6000000 INFO @ Fri, 05 Jul 2019 12:42:56: 6000000 INFO @ Fri, 05 Jul 2019 12:43:03: 7000000 INFO @ Fri, 05 Jul 2019 12:43:04: 7000000 INFO @ Fri, 05 Jul 2019 12:43:06: 7000000 INFO @ Fri, 05 Jul 2019 12:43:12: 8000000 INFO @ Fri, 05 Jul 2019 12:43:12: 8000000 INFO @ Fri, 05 Jul 2019 12:43:14: 8000000 INFO @ Fri, 05 Jul 2019 12:43:19: 9000000 INFO @ Fri, 05 Jul 2019 12:43:20: 9000000 INFO @ Fri, 05 Jul 2019 12:43:23: 9000000 INFO @ Fri, 05 Jul 2019 12:43:27: 10000000 INFO @ Fri, 05 Jul 2019 12:43:28: 10000000 INFO @ Fri, 05 Jul 2019 12:43:31: 10000000 INFO @ Fri, 05 Jul 2019 12:43:35: 11000000 INFO @ Fri, 05 Jul 2019 12:43:36: 11000000 INFO @ Fri, 05 Jul 2019 12:43:40: 11000000 INFO @ Fri, 05 Jul 2019 12:43:43: 12000000 INFO @ Fri, 05 Jul 2019 12:43:44: 12000000 INFO @ Fri, 05 Jul 2019 12:43:48: 12000000 INFO @ Fri, 05 Jul 2019 12:43:50: 13000000 INFO @ Fri, 05 Jul 2019 12:43:51: 13000000 INFO @ Fri, 05 Jul 2019 12:43:56: 13000000 INFO @ Fri, 05 Jul 2019 12:43:58: 14000000 INFO @ Fri, 05 Jul 2019 12:43:59: 14000000 INFO @ Fri, 05 Jul 2019 12:44:05: 14000000 INFO @ Fri, 05 Jul 2019 12:44:06: 15000000 INFO @ Fri, 05 Jul 2019 12:44:07: 15000000 INFO @ Fri, 05 Jul 2019 12:44:13: 16000000 INFO @ Fri, 05 Jul 2019 12:44:13: 15000000 INFO @ Fri, 05 Jul 2019 12:44:14: 16000000 INFO @ Fri, 05 Jul 2019 12:44:20: 17000000 INFO @ Fri, 05 Jul 2019 12:44:21: 16000000 INFO @ Fri, 05 Jul 2019 12:44:22: 17000000 INFO @ Fri, 05 Jul 2019 12:44:28: 18000000 INFO @ Fri, 05 Jul 2019 12:44:29: 17000000 INFO @ Fri, 05 Jul 2019 12:44:29: 18000000 INFO @ Fri, 05 Jul 2019 12:44:35: 19000000 INFO @ Fri, 05 Jul 2019 12:44:37: 19000000 INFO @ Fri, 05 Jul 2019 12:44:38: 18000000 INFO @ Fri, 05 Jul 2019 12:44:43: 20000000 INFO @ Fri, 05 Jul 2019 12:44:44: 20000000 INFO @ Fri, 05 Jul 2019 12:44:46: 19000000 INFO @ Fri, 05 Jul 2019 12:44:50: 21000000 INFO @ Fri, 05 Jul 2019 12:44:52: 21000000 INFO @ Fri, 05 Jul 2019 12:44:54: 20000000 INFO @ Fri, 05 Jul 2019 12:44:58: 22000000 INFO @ Fri, 05 Jul 2019 12:44:59: 22000000 INFO @ Fri, 05 Jul 2019 12:45:02: 21000000 INFO @ Fri, 05 Jul 2019 12:45:05: 23000000 INFO @ Fri, 05 Jul 2019 12:45:06: 23000000 INFO @ Fri, 05 Jul 2019 12:45:10: 22000000 INFO @ Fri, 05 Jul 2019 12:45:12: 24000000 INFO @ Fri, 05 Jul 2019 12:45:14: 24000000 INFO @ Fri, 05 Jul 2019 12:45:18: 23000000 INFO @ Fri, 05 Jul 2019 12:45:20: 25000000 INFO @ Fri, 05 Jul 2019 12:45:21: 25000000 INFO @ Fri, 05 Jul 2019 12:45:27: 24000000 INFO @ Fri, 05 Jul 2019 12:45:28: 26000000 INFO @ Fri, 05 Jul 2019 12:45:29: 26000000 INFO @ Fri, 05 Jul 2019 12:45:35: 25000000 INFO @ Fri, 05 Jul 2019 12:45:35: 27000000 INFO @ Fri, 05 Jul 2019 12:45:37: 27000000 INFO @ Fri, 05 Jul 2019 12:45:43: 28000000 INFO @ Fri, 05 Jul 2019 12:45:43: 26000000 INFO @ Fri, 05 Jul 2019 12:45:45: 28000000 INFO @ Fri, 05 Jul 2019 12:45:51: 29000000 INFO @ Fri, 05 Jul 2019 12:45:52: 27000000 INFO @ Fri, 05 Jul 2019 12:45:53: 29000000 INFO @ Fri, 05 Jul 2019 12:45:59: 30000000 INFO @ Fri, 05 Jul 2019 12:46:00: 30000000 INFO @ Fri, 05 Jul 2019 12:46:00: 28000000 INFO @ Fri, 05 Jul 2019 12:46:06: 31000000 INFO @ Fri, 05 Jul 2019 12:46:08: 31000000 INFO @ Fri, 05 Jul 2019 12:46:09: 29000000 INFO @ Fri, 05 Jul 2019 12:46:14: 32000000 INFO @ Fri, 05 Jul 2019 12:46:16: 32000000 INFO @ Fri, 05 Jul 2019 12:46:18: 30000000 INFO @ Fri, 05 Jul 2019 12:46:22: 33000000 INFO @ Fri, 05 Jul 2019 12:46:23: 33000000 INFO @ Fri, 05 Jul 2019 12:46:26: 31000000 INFO @ Fri, 05 Jul 2019 12:46:29: 34000000 INFO @ Fri, 05 Jul 2019 12:46:31: 34000000 INFO @ Fri, 05 Jul 2019 12:46:35: 32000000 INFO @ Fri, 05 Jul 2019 12:46:37: 35000000 INFO @ Fri, 05 Jul 2019 12:46:39: 35000000 INFO @ Fri, 05 Jul 2019 12:46:43: 33000000 INFO @ Fri, 05 Jul 2019 12:46:45: 36000000 INFO @ Fri, 05 Jul 2019 12:46:47: 36000000 INFO @ Fri, 05 Jul 2019 12:46:52: 34000000 INFO @ Fri, 05 Jul 2019 12:46:53: 37000000 INFO @ Fri, 05 Jul 2019 12:46:55: 37000000 INFO @ Fri, 05 Jul 2019 12:47:00: 35000000 INFO @ Fri, 05 Jul 2019 12:47:01: 38000000 INFO @ Fri, 05 Jul 2019 12:47:03: 38000000 INFO @ Fri, 05 Jul 2019 12:47:09: 36000000 INFO @ Fri, 05 Jul 2019 12:47:09: 39000000 INFO @ Fri, 05 Jul 2019 12:47:11: 39000000 INFO @ Fri, 05 Jul 2019 12:47:17: 40000000 INFO @ Fri, 05 Jul 2019 12:47:18: 37000000 INFO @ Fri, 05 Jul 2019 12:47:19: 40000000 INFO @ Fri, 05 Jul 2019 12:47:25: 41000000 INFO @ Fri, 05 Jul 2019 12:47:26: 41000000 INFO @ Fri, 05 Jul 2019 12:47:27: 38000000 INFO @ Fri, 05 Jul 2019 12:47:33: 42000000 INFO @ Fri, 05 Jul 2019 12:47:34: 42000000 INFO @ Fri, 05 Jul 2019 12:47:35: 39000000 INFO @ Fri, 05 Jul 2019 12:47:40: 43000000 INFO @ Fri, 05 Jul 2019 12:47:42: 43000000 INFO @ Fri, 05 Jul 2019 12:47:44: 40000000 INFO @ Fri, 05 Jul 2019 12:47:48: 44000000 INFO @ Fri, 05 Jul 2019 12:47:49: 44000000 INFO @ Fri, 05 Jul 2019 12:47:53: 41000000 INFO @ Fri, 05 Jul 2019 12:47:56: 45000000 INFO @ Fri, 05 Jul 2019 12:47:57: 45000000 INFO @ Fri, 05 Jul 2019 12:48:01: 42000000 INFO @ Fri, 05 Jul 2019 12:48:04: 46000000 INFO @ Fri, 05 Jul 2019 12:48:04: 46000000 INFO @ Fri, 05 Jul 2019 12:48:09: 43000000 INFO @ Fri, 05 Jul 2019 12:48:12: 47000000 INFO @ Fri, 05 Jul 2019 12:48:12: 47000000 INFO @ Fri, 05 Jul 2019 12:48:18: 44000000 INFO @ Fri, 05 Jul 2019 12:48:20: 48000000 INFO @ Fri, 05 Jul 2019 12:48:20: 48000000 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12:50:33: 60000000 INFO @ Fri, 05 Jul 2019 12:50:34: 64000000 INFO @ Fri, 05 Jul 2019 12:50:39: 65000000 INFO @ Fri, 05 Jul 2019 12:50:42: 61000000 INFO @ Fri, 05 Jul 2019 12:50:42: 65000000 INFO @ Fri, 05 Jul 2019 12:50:47: 66000000 INFO @ Fri, 05 Jul 2019 12:50:50: 66000000 INFO @ Fri, 05 Jul 2019 12:50:51: 62000000 INFO @ Fri, 05 Jul 2019 12:50:55: 67000000 INFO @ Fri, 05 Jul 2019 12:50:58: 67000000 INFO @ Fri, 05 Jul 2019 12:50:59: 63000000 INFO @ Fri, 05 Jul 2019 12:51:03: 68000000 INFO @ Fri, 05 Jul 2019 12:51:07: 68000000 INFO @ Fri, 05 Jul 2019 12:51:07: 64000000 INFO @ Fri, 05 Jul 2019 12:51:13: 69000000 INFO @ Fri, 05 Jul 2019 12:51:16: 65000000 INFO @ Fri, 05 Jul 2019 12:51:16: 69000000 INFO @ Fri, 05 Jul 2019 12:51:22: 70000000 INFO @ Fri, 05 Jul 2019 12:51:24: 66000000 INFO @ Fri, 05 Jul 2019 12:51:24: 70000000 INFO @ Fri, 05 Jul 2019 12:51:30: 71000000 INFO @ Fri, 05 Jul 2019 12:51:32: 67000000 INFO @ Fri, 05 Jul 2019 12:51:32: 71000000 INFO @ Fri, 05 Jul 2019 12:51:38: 72000000 INFO @ Fri, 05 Jul 2019 12:51:40: 72000000 INFO @ Fri, 05 Jul 2019 12:51:40: 68000000 INFO @ Fri, 05 Jul 2019 12:51:46: 73000000 INFO @ Fri, 05 Jul 2019 12:51:48: 69000000 INFO @ Fri, 05 Jul 2019 12:51:48: 73000000 INFO @ Fri, 05 Jul 2019 12:51:55: 74000000 INFO @ Fri, 05 Jul 2019 12:51:56: 70000000 INFO @ Fri, 05 Jul 2019 12:51:57: 74000000 INFO @ Fri, 05 Jul 2019 12:52:04: 75000000 INFO @ Fri, 05 Jul 2019 12:52:04: 71000000 INFO @ Fri, 05 Jul 2019 12:52:06: 75000000 INFO @ Fri, 05 Jul 2019 12:52:12: 76000000 INFO @ Fri, 05 Jul 2019 12:52:12: 72000000 INFO @ Fri, 05 Jul 2019 12:52:14: 76000000 INFO @ Fri, 05 Jul 2019 12:52:20: 77000000 INFO @ Fri, 05 Jul 2019 12:52:21: 73000000 INFO @ Fri, 05 Jul 2019 12:52:23: 77000000 INFO @ Fri, 05 Jul 2019 12:52:29: 78000000 INFO @ Fri, 05 Jul 2019 12:52:30: 74000000 INFO @ Fri, 05 Jul 2019 12:52:31: 78000000 INFO @ Fri, 05 Jul 2019 12:52:37: 79000000 INFO @ Fri, 05 Jul 2019 12:52:39: 75000000 INFO @ Fri, 05 Jul 2019 12:52:40: 79000000 INFO @ Fri, 05 Jul 2019 12:52:46: 80000000 INFO @ Fri, 05 Jul 2019 12:52:48: 76000000 INFO @ Fri, 05 Jul 2019 12:52:49: 80000000 INFO @ Fri, 05 Jul 2019 12:52:55: 81000000 INFO @ Fri, 05 Jul 2019 12:52:56: 77000000 INFO @ Fri, 05 Jul 2019 12:52:57: 81000000 INFO @ Fri, 05 Jul 2019 12:53:04: 82000000 INFO @ Fri, 05 Jul 2019 12:53:05: 78000000 INFO @ Fri, 05 Jul 2019 12:53:06: 82000000 INFO @ Fri, 05 Jul 2019 12:53:12: 83000000 INFO @ Fri, 05 Jul 2019 12:53:15: 79000000 INFO @ Fri, 05 Jul 2019 12:53:15: 83000000 INFO @ Fri, 05 Jul 2019 12:53:20: 84000000 INFO @ Fri, 05 Jul 2019 12:53:23: 84000000 INFO @ Fri, 05 Jul 2019 12:53:24: 80000000 INFO @ Fri, 05 Jul 2019 12:53:28: 85000000 INFO @ Fri, 05 Jul 2019 12:53:31: 85000000 INFO @ Fri, 05 Jul 2019 12:53:33: 81000000 INFO @ Fri, 05 Jul 2019 12:53:36: 86000000 INFO @ Fri, 05 Jul 2019 12:53:39: 86000000 INFO @ Fri, 05 Jul 2019 12:53:41: 82000000 INFO @ Fri, 05 Jul 2019 12:53:44: 87000000 INFO @ Fri, 05 Jul 2019 12:53:47: 87000000 INFO @ Fri, 05 Jul 2019 12:53:50: 83000000 INFO @ Fri, 05 Jul 2019 12:53:53: 88000000 INFO @ Fri, 05 Jul 2019 12:53:56: 88000000 INFO @ Fri, 05 Jul 2019 12:53:58: 84000000 INFO @ Fri, 05 Jul 2019 12:54:01: 89000000 INFO @ Fri, 05 Jul 2019 12:54:04: 89000000 INFO @ Fri, 05 Jul 2019 12:54:07: 85000000 INFO @ Fri, 05 Jul 2019 12:54:09: 90000000 INFO @ Fri, 05 Jul 2019 12:54:12: 90000000 INFO @ Fri, 05 Jul 2019 12:54:15: 86000000 INFO @ Fri, 05 Jul 2019 12:54:18: 91000000 INFO @ Fri, 05 Jul 2019 12:54:21: 91000000 INFO @ Fri, 05 Jul 2019 12:54:24: 87000000 INFO @ Fri, 05 Jul 2019 12:54:26: 92000000 INFO @ Fri, 05 Jul 2019 12:54:29: 92000000 INFO @ Fri, 05 Jul 2019 12:54:33: 88000000 INFO @ Fri, 05 Jul 2019 12:54:34: 93000000 INFO @ Fri, 05 Jul 2019 12:54:37: 93000000 INFO @ Fri, 05 Jul 2019 12:54:41: 89000000 INFO @ Fri, 05 Jul 2019 12:54:42: 94000000 INFO @ Fri, 05 Jul 2019 12:54:45: 94000000 INFO @ Fri, 05 Jul 2019 12:54:50: 90000000 INFO @ Fri, 05 Jul 2019 12:54:51: 95000000 INFO @ Fri, 05 Jul 2019 12:54:53: 95000000 INFO @ Fri, 05 Jul 2019 12:54:59: 91000000 INFO @ Fri, 05 Jul 2019 12:54:59: 96000000 INFO @ Fri, 05 Jul 2019 12:55:01: 96000000 INFO @ Fri, 05 Jul 2019 12:55:07: 97000000 INFO @ Fri, 05 Jul 2019 12:55:07: 92000000 INFO @ Fri, 05 Jul 2019 12:55:09: 97000000 INFO @ Fri, 05 Jul 2019 12:55:15: 98000000 INFO @ Fri, 05 Jul 2019 12:55:16: 93000000 INFO @ Fri, 05 Jul 2019 12:55:17: 98000000 INFO @ Fri, 05 Jul 2019 12:55:23: 99000000 INFO @ Fri, 05 Jul 2019 12:55:24: 94000000 INFO @ Fri, 05 Jul 2019 12:55:25: 99000000 INFO @ Fri, 05 Jul 2019 12:55:30: 100000000 INFO @ Fri, 05 Jul 2019 12:55:32: 95000000 INFO @ Fri, 05 Jul 2019 12:55:33: 100000000 INFO @ Fri, 05 Jul 2019 12:55:38: 101000000 INFO @ Fri, 05 Jul 2019 12:55:41: 96000000 INFO @ Fri, 05 Jul 2019 12:55:41: 101000000 INFO @ Fri, 05 Jul 2019 12:55:46: 102000000 INFO @ Fri, 05 Jul 2019 12:55:49: 102000000 INFO @ Fri, 05 Jul 2019 12:55:49: 97000000 INFO @ Fri, 05 Jul 2019 12:55:54: 103000000 INFO @ Fri, 05 Jul 2019 12:55:57: 103000000 INFO @ Fri, 05 Jul 2019 12:55:57: 98000000 INFO @ Fri, 05 Jul 2019 12:56:02: 104000000 INFO @ Fri, 05 Jul 2019 12:56:05: 104000000 INFO @ Fri, 05 Jul 2019 12:56:05: 99000000 INFO @ Fri, 05 Jul 2019 12:56:10: 105000000 INFO @ Fri, 05 Jul 2019 12:56:12: 105000000 INFO @ Fri, 05 Jul 2019 12:56:14: 100000000 INFO @ Fri, 05 Jul 2019 12:56:17: 106000000 INFO @ Fri, 05 Jul 2019 12:56:20: 106000000 INFO @ Fri, 05 Jul 2019 12:56:22: 101000000 INFO @ Fri, 05 Jul 2019 12:56:25: 107000000 INFO @ Fri, 05 Jul 2019 12:56:28: 107000000 INFO @ Fri, 05 Jul 2019 12:56:30: 102000000 INFO @ Fri, 05 Jul 2019 12:56:33: 108000000 INFO @ Fri, 05 Jul 2019 12:56:36: 108000000 INFO @ Fri, 05 Jul 2019 12:56:38: 103000000 INFO @ Fri, 05 Jul 2019 12:56:42: 109000000 INFO @ Fri, 05 Jul 2019 12:56:44: 109000000 INFO @ Fri, 05 Jul 2019 12:56:46: 104000000 INFO @ Fri, 05 Jul 2019 12:56:50: 110000000 INFO @ Fri, 05 Jul 2019 12:56:53: 110000000 INFO @ Fri, 05 Jul 2019 12:56:55: 105000000 INFO @ Fri, 05 Jul 2019 12:56:58: 111000000 INFO @ Fri, 05 Jul 2019 12:57:01: 111000000 INFO @ Fri, 05 Jul 2019 12:57:03: 106000000 INFO @ Fri, 05 Jul 2019 12:57:07: 112000000 INFO @ Fri, 05 Jul 2019 12:57:09: 112000000 INFO @ Fri, 05 Jul 2019 12:57:12: 107000000 INFO @ Fri, 05 Jul 2019 12:57:15: 113000000 INFO @ Fri, 05 Jul 2019 12:57:18: 113000000 INFO @ Fri, 05 Jul 2019 12:57:21: 108000000 INFO @ Fri, 05 Jul 2019 12:57:24: 114000000 INFO @ Fri, 05 Jul 2019 12:57:26: 114000000 INFO @ Fri, 05 Jul 2019 12:57:30: 109000000 INFO @ Fri, 05 Jul 2019 12:57:32: 115000000 INFO @ Fri, 05 Jul 2019 12:57:34: 115000000 INFO @ Fri, 05 Jul 2019 12:57:39: 110000000 INFO @ Fri, 05 Jul 2019 12:57:40: 116000000 INFO @ Fri, 05 Jul 2019 12:57:42: 116000000 INFO @ Fri, 05 Jul 2019 12:57:48: 111000000 INFO @ Fri, 05 Jul 2019 12:57:49: 117000000 INFO @ Fri, 05 Jul 2019 12:57:51: 117000000 INFO @ Fri, 05 Jul 2019 12:57:56: 118000000 INFO @ Fri, 05 Jul 2019 12:57:56: 112000000 INFO @ Fri, 05 Jul 2019 12:57:58: 118000000 INFO @ Fri, 05 Jul 2019 12:58:04: 119000000 INFO @ Fri, 05 Jul 2019 12:58:05: 113000000 INFO @ Fri, 05 Jul 2019 12:58:06: 119000000 INFO @ Fri, 05 Jul 2019 12:58:12: 120000000 INFO @ Fri, 05 Jul 2019 12:58:13: 114000000 INFO @ Fri, 05 Jul 2019 12:58:14: 120000000 INFO @ Fri, 05 Jul 2019 12:58:19: 121000000 INFO @ Fri, 05 Jul 2019 12:58:21: 121000000 INFO @ Fri, 05 Jul 2019 12:58:22: 115000000 INFO @ Fri, 05 Jul 2019 12:58:27: 122000000 INFO @ Fri, 05 Jul 2019 12:58:29: 122000000 INFO @ Fri, 05 Jul 2019 12:58:30: 116000000 INFO @ Fri, 05 Jul 2019 12:58:35: 123000000 INFO @ Fri, 05 Jul 2019 12:58:37: 123000000 INFO @ Fri, 05 Jul 2019 12:58:38: 117000000 INFO @ Fri, 05 Jul 2019 12:58:43: 124000000 INFO @ Fri, 05 Jul 2019 12:58:45: 124000000 INFO @ Fri, 05 Jul 2019 12:58:47: 118000000 INFO @ Fri, 05 Jul 2019 12:58:51: 125000000 INFO @ Fri, 05 Jul 2019 12:58:53: 125000000 INFO @ Fri, 05 Jul 2019 12:58:55: 119000000 INFO @ Fri, 05 Jul 2019 12:58:58: 126000000 INFO @ Fri, 05 Jul 2019 12:59:00: 126000000 INFO @ Fri, 05 Jul 2019 12:59:03: 120000000 INFO @ Fri, 05 Jul 2019 12:59:06: 127000000 INFO @ Fri, 05 Jul 2019 12:59:08: 127000000 INFO @ Fri, 05 Jul 2019 12:59:12: 121000000 INFO @ Fri, 05 Jul 2019 12:59:13: 128000000 INFO @ Fri, 05 Jul 2019 12:59:15: 128000000 INFO @ Fri, 05 Jul 2019 12:59:20: 122000000 INFO @ Fri, 05 Jul 2019 12:59:21: 129000000 INFO @ Fri, 05 Jul 2019 12:59:22: 129000000 INFO @ Fri, 05 Jul 2019 12:59:28: 130000000 INFO @ Fri, 05 Jul 2019 12:59:29: 123000000 INFO @ Fri, 05 Jul 2019 12:59:30: 130000000 INFO @ Fri, 05 Jul 2019 12:59:35: 131000000 INFO @ Fri, 05 Jul 2019 12:59:37: 124000000 INFO @ Fri, 05 Jul 2019 12:59:37: 131000000 INFO @ Fri, 05 Jul 2019 12:59:43: 132000000 INFO @ Fri, 05 Jul 2019 12:59:45: 132000000 INFO @ Fri, 05 Jul 2019 12:59:45: 125000000 INFO @ Fri, 05 Jul 2019 12:59:51: 133000000 INFO @ Fri, 05 Jul 2019 12:59:52: 133000000 INFO @ Fri, 05 Jul 2019 12:59:53: 126000000 INFO @ Fri, 05 Jul 2019 12:59:58: 134000000 INFO @ Fri, 05 Jul 2019 13:00:00: 134000000 INFO @ Fri, 05 Jul 2019 13:00:01: 127000000 INFO @ Fri, 05 Jul 2019 13:00:07: 135000000 INFO @ Fri, 05 Jul 2019 13:00:08: 135000000 INFO @ Fri, 05 Jul 2019 13:00:10: 128000000 INFO @ Fri, 05 Jul 2019 13:00:14: 136000000 INFO @ Fri, 05 Jul 2019 13:00:16: 136000000 INFO @ Fri, 05 Jul 2019 13:00:18: 129000000 INFO @ Fri, 05 Jul 2019 13:00:22: 137000000 INFO @ Fri, 05 Jul 2019 13:00:24: 137000000 INFO @ Fri, 05 Jul 2019 13:00:26: 130000000 INFO @ Fri, 05 Jul 2019 13:00:29: 138000000 INFO @ Fri, 05 Jul 2019 13:00:31: 138000000 INFO @ Fri, 05 Jul 2019 13:00:34: 131000000 INFO @ Fri, 05 Jul 2019 13:00:37: 139000000 INFO @ Fri, 05 Jul 2019 13:00:39: 139000000 INFO @ Fri, 05 Jul 2019 13:00:42: 132000000 INFO @ Fri, 05 Jul 2019 13:00:45: 140000000 INFO @ Fri, 05 Jul 2019 13:00:47: 140000000 INFO @ Fri, 05 Jul 2019 13:00:50: 133000000 INFO @ Fri, 05 Jul 2019 13:00:54: 141000000 INFO @ Fri, 05 Jul 2019 13:00:56: 141000000 INFO @ Fri, 05 Jul 2019 13:00:58: 134000000 INFO @ Fri, 05 Jul 2019 13:01:02: 142000000 INFO @ Fri, 05 Jul 2019 13:01:04: 142000000 INFO @ Fri, 05 Jul 2019 13:01:07: 135000000 INFO @ Fri, 05 Jul 2019 13:01:09: 143000000 INFO @ Fri, 05 Jul 2019 13:01:11: 143000000 INFO @ Fri, 05 Jul 2019 13:01:15: 136000000 INFO @ Fri, 05 Jul 2019 13:01:17: 144000000 INFO @ Fri, 05 Jul 2019 13:01:19: 144000000 INFO @ Fri, 05 Jul 2019 13:01:23: 137000000 INFO @ Fri, 05 Jul 2019 13:01:24: 145000000 INFO @ Fri, 05 Jul 2019 13:01:26: 145000000 INFO @ Fri, 05 Jul 2019 13:01:31: 138000000 INFO @ Fri, 05 Jul 2019 13:01:32: 146000000 INFO @ Fri, 05 Jul 2019 13:01:34: 146000000 INFO @ Fri, 05 Jul 2019 13:01:40: 147000000 INFO @ Fri, 05 Jul 2019 13:01:40: 139000000 INFO @ Fri, 05 Jul 2019 13:01:41: 147000000 INFO @ Fri, 05 Jul 2019 13:01:47: 148000000 INFO @ Fri, 05 Jul 2019 13:01:47: 140000000 INFO @ Fri, 05 Jul 2019 13:01:49: 148000000 INFO @ Fri, 05 Jul 2019 13:01:55: 149000000 INFO @ Fri, 05 Jul 2019 13:01:55: 141000000 INFO @ Fri, 05 Jul 2019 13:01:57: 149000000 INFO @ Fri, 05 Jul 2019 13:02:02: 150000000 INFO @ Fri, 05 Jul 2019 13:02:03: 142000000 INFO @ Fri, 05 Jul 2019 13:02:04: 150000000 INFO @ Fri, 05 Jul 2019 13:02:10: 151000000 INFO @ Fri, 05 Jul 2019 13:02:11: 143000000 INFO @ Fri, 05 Jul 2019 13:02:12: 151000000 INFO @ Fri, 05 Jul 2019 13:02:17: 152000000 INFO @ Fri, 05 Jul 2019 13:02:19: 152000000 INFO @ Fri, 05 Jul 2019 13:02:19: 144000000 INFO @ Fri, 05 Jul 2019 13:02:25: 153000000 INFO @ Fri, 05 Jul 2019 13:02:27: 153000000 INFO @ Fri, 05 Jul 2019 13:02:28: 145000000 INFO @ Fri, 05 Jul 2019 13:02:33: 154000000 INFO @ Fri, 05 Jul 2019 13:02:35: 154000000 INFO @ Fri, 05 Jul 2019 13:02:36: 146000000 INFO @ Fri, 05 Jul 2019 13:02:37: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 13:02:37: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 13:02:37: #1 total tags in treatment: 154198551 INFO @ Fri, 05 Jul 2019 13:02:37: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 13:02:37: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 13:02:39: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 13:02:39: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 13:02:39: #1 total tags in treatment: 154198551 INFO @ Fri, 05 Jul 2019 13:02:39: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 13:02:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 13:02:40: #1 tags after filtering in treatment: 154198522 INFO @ Fri, 05 Jul 2019 13:02:40: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 13:02:40: #1 finished! INFO @ Fri, 05 Jul 2019 13:02:40: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 13:02:40: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 13:02:42: #1 tags after filtering in treatment: 154198522 INFO @ Fri, 05 Jul 2019 13:02:42: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 13:02:42: #1 finished! INFO @ Fri, 05 Jul 2019 13:02:42: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 13:02:42: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 13:02:44: 147000000 INFO @ Fri, 05 Jul 2019 13:02:52: 148000000 INFO @ Fri, 05 Jul 2019 13:02:54: #2 number of paired peaks: 5765 INFO @ Fri, 05 Jul 2019 13:02:54: start model_add_line... INFO @ Fri, 05 Jul 2019 13:02:56: start X-correlation... INFO @ Fri, 05 Jul 2019 13:02:56: end of X-cor INFO @ Fri, 05 Jul 2019 13:02:56: #2 finished! INFO @ Fri, 05 Jul 2019 13:02:56: #2 predicted fragment length is 104 bps INFO @ Fri, 05 Jul 2019 13:02:56: #2 alternative fragment length(s) may be 4,104 bps INFO @ Fri, 05 Jul 2019 13:02:56: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.20_model.r INFO @ Fri, 05 Jul 2019 13:02:56: #3 Call peaks... INFO @ Fri, 05 Jul 2019 13:02:56: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 13:02:56: #2 number of paired peaks: 5765 INFO @ Fri, 05 Jul 2019 13:02:56: start model_add_line... INFO @ Fri, 05 Jul 2019 13:02:58: start X-correlation... INFO @ Fri, 05 Jul 2019 13:02:58: end of X-cor INFO @ Fri, 05 Jul 2019 13:02:58: #2 finished! INFO @ Fri, 05 Jul 2019 13:02:58: #2 predicted fragment length is 104 bps INFO @ Fri, 05 Jul 2019 13:02:58: #2 alternative fragment length(s) may be 4,104 bps INFO @ Fri, 05 Jul 2019 13:02:58: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.10_model.r INFO @ Fri, 05 Jul 2019 13:02:58: #3 Call peaks... INFO @ Fri, 05 Jul 2019 13:02:58: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 13:03:00: 149000000 INFO @ Fri, 05 Jul 2019 13:03:08: 150000000 INFO @ Fri, 05 Jul 2019 13:03:16: 151000000 INFO @ Fri, 05 Jul 2019 13:03:24: 152000000 INFO @ Fri, 05 Jul 2019 13:03:32: 153000000 INFO @ Fri, 05 Jul 2019 13:03:40: 154000000 INFO @ Fri, 05 Jul 2019 13:03:44: #1 tag size is determined as 50 bps INFO @ Fri, 05 Jul 2019 13:03:44: #1 tag size = 50 INFO @ Fri, 05 Jul 2019 13:03:44: #1 total tags in treatment: 154198551 INFO @ Fri, 05 Jul 2019 13:03:44: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 13:03:44: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 13:03:47: #1 tags after filtering in treatment: 154198522 INFO @ Fri, 05 Jul 2019 13:03:47: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 13:03:47: #1 finished! INFO @ Fri, 05 Jul 2019 13:03:47: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 13:03:47: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 13:04:02: #2 number of paired peaks: 5765 INFO @ Fri, 05 Jul 2019 13:04:02: start model_add_line... INFO @ Fri, 05 Jul 2019 13:04:03: start X-correlation... INFO @ Fri, 05 Jul 2019 13:04:03: end of X-cor INFO @ Fri, 05 Jul 2019 13:04:03: #2 finished! INFO @ Fri, 05 Jul 2019 13:04:03: #2 predicted fragment length is 104 bps INFO @ Fri, 05 Jul 2019 13:04:03: #2 alternative fragment length(s) may be 4,104 bps INFO @ Fri, 05 Jul 2019 13:04:03: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.05_model.r INFO @ Fri, 05 Jul 2019 13:04:03: #3 Call peaks... INFO @ Fri, 05 Jul 2019 13:04:03: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 13:10:32: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 13:10:36: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 13:11:44: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 13:14:23: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.20_peaks.xls INFO @ Fri, 05 Jul 2019 13:14:23: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 13:14:23: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.20_summits.bed INFO @ Fri, 05 Jul 2019 13:14:23: Done! pass1 - making usageList (47 chroms): 2 millis pass2 - checking and writing primary data (927 records, 4 fields): 11 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 13:14:27: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.10_peaks.xls INFO @ Fri, 05 Jul 2019 13:14:27: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 13:14:27: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.10_summits.bed INFO @ Fri, 05 Jul 2019 13:14:27: Done! pass1 - making usageList (86 chroms): 2 millis pass2 - checking and writing primary data (4993 records, 4 fields): 14 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 13:15:46: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.05_peaks.xls INFO @ Fri, 05 Jul 2019 13:15:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 13:15:47: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101945/ERX101945.05_summits.bed INFO @ Fri, 05 Jul 2019 13:15:47: Done! pass1 - making usageList (158 chroms): 5 millis pass2 - checking and writing primary data (21318 records, 4 fields): 35 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。