Job ID = 2001549 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-04T19:41:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:47:58 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:59:37 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:12:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:12:49 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:59:18 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 176,350,539 reads read : 176,350,539 reads written : 176,350,539 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:00 Time loading forward index: 00:00:02 Time loading mirror index: 00:00:01 Multiseed full-index search: 03:08:44 176350539 reads; of these: 176350539 (100.00%) were unpaired; of these: 5793252 (3.29%) aligned 0 times 122344248 (69.38%) aligned exactly 1 time 48213039 (27.34%) aligned >1 times 96.71% overall alignment rate Time searching: 03:08:47 Overall time: 03:08:47 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 72 files... [bam_rmdupse_core] 25263576 / 170557287 = 0.1481 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 10:26:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 10:26:13: #1 read tag files... INFO @ Fri, 05 Jul 2019 10:26:13: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 10:26:13: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 10:26:13: #1 read tag files... INFO @ Fri, 05 Jul 2019 10:26:13: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 10:26:14: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 10:26:14: #1 read tag files... INFO @ Fri, 05 Jul 2019 10:26:14: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 10:26:20: 1000000 INFO @ Fri, 05 Jul 2019 10:26:21: 1000000 INFO @ Fri, 05 Jul 2019 10:26:21: 1000000 INFO @ Fri, 05 Jul 2019 10:26:27: 2000000 INFO @ Fri, 05 Jul 2019 10:26:29: 2000000 INFO @ Fri, 05 Jul 2019 10:26:29: 2000000 INFO @ Fri, 05 Jul 2019 10:26:34: 3000000 INFO @ Fri, 05 Jul 2019 10:26:36: 3000000 INFO @ Fri, 05 Jul 2019 10:26:37: 3000000 INFO @ Fri, 05 Jul 2019 10:26:42: 4000000 INFO @ Fri, 05 Jul 2019 10:26:43: 4000000 INFO @ Fri, 05 Jul 2019 10:26:45: 4000000 INFO @ Fri, 05 Jul 2019 10:26:50: 5000000 INFO @ Fri, 05 Jul 2019 10:26:51: 5000000 INFO @ Fri, 05 Jul 2019 10:26:54: 5000000 INFO @ Fri, 05 Jul 2019 10:26:58: 6000000 INFO @ Fri, 05 Jul 2019 10:27:00: 6000000 INFO @ Fri, 05 Jul 2019 10:27:02: 6000000 INFO @ Fri, 05 Jul 2019 10:27:07: 7000000 INFO @ Fri, 05 Jul 2019 10:27:08: 7000000 INFO @ Fri, 05 Jul 2019 10:27:10: 7000000 INFO @ Fri, 05 Jul 2019 10:27:15: 8000000 INFO @ Fri, 05 Jul 2019 10:27:16: 8000000 INFO @ Fri, 05 Jul 2019 10:27:18: 8000000 INFO @ Fri, 05 Jul 2019 10:27:23: 9000000 INFO @ Fri, 05 Jul 2019 10:27:24: 9000000 INFO @ Fri, 05 Jul 2019 10:27:26: 9000000 INFO @ Fri, 05 Jul 2019 10:27:31: 10000000 INFO @ Fri, 05 Jul 2019 10:27:32: 10000000 INFO @ Fri, 05 Jul 2019 10:27:34: 10000000 INFO @ Fri, 05 Jul 2019 10:27:39: 11000000 INFO @ Fri, 05 Jul 2019 10:27:40: 11000000 INFO @ Fri, 05 Jul 2019 10:27:42: 11000000 INFO @ Fri, 05 Jul 2019 10:27:47: 12000000 INFO @ Fri, 05 Jul 2019 10:27:48: 12000000 INFO @ Fri, 05 Jul 2019 10:27:50: 12000000 INFO @ Fri, 05 Jul 2019 10:27:55: 13000000 INFO @ Fri, 05 Jul 2019 10:27:56: 13000000 INFO @ Fri, 05 Jul 2019 10:27:58: 13000000 INFO @ Fri, 05 Jul 2019 10:28:03: 14000000 INFO @ Fri, 05 Jul 2019 10:28:04: 14000000 INFO @ Fri, 05 Jul 2019 10:28:06: 14000000 INFO @ Fri, 05 Jul 2019 10:28:11: 15000000 INFO @ Fri, 05 Jul 2019 10:28:12: 15000000 INFO @ Fri, 05 Jul 2019 10:28:14: 15000000 INFO @ Fri, 05 Jul 2019 10:28:19: 16000000 INFO @ Fri, 05 Jul 2019 10:28:20: 16000000 INFO @ Fri, 05 Jul 2019 10:28:22: 16000000 INFO @ Fri, 05 Jul 2019 10:28:27: 17000000 INFO @ Fri, 05 Jul 2019 10:28:28: 17000000 INFO @ Fri, 05 Jul 2019 10:28:30: 17000000 INFO @ Fri, 05 Jul 2019 10:28:35: 18000000 INFO @ Fri, 05 Jul 2019 10:28:36: 18000000 INFO @ Fri, 05 Jul 2019 10:28:38: 18000000 INFO @ Fri, 05 Jul 2019 10:28:43: 19000000 INFO @ Fri, 05 Jul 2019 10:28:44: 19000000 INFO @ Fri, 05 Jul 2019 10:28:46: 19000000 INFO @ Fri, 05 Jul 2019 10:28:51: 20000000 INFO @ Fri, 05 Jul 2019 10:28:52: 20000000 INFO @ Fri, 05 Jul 2019 10:28:53: 20000000 INFO @ Fri, 05 Jul 2019 10:28:59: 21000000 INFO @ Fri, 05 Jul 2019 10:29:00: 21000000 INFO @ Fri, 05 Jul 2019 10:29:01: 21000000 INFO @ Fri, 05 Jul 2019 10:29:07: 22000000 INFO @ Fri, 05 Jul 2019 10:29:09: 22000000 INFO @ Fri, 05 Jul 2019 10:29:09: 22000000 INFO @ Fri, 05 Jul 2019 10:29:16: 23000000 INFO @ Fri, 05 Jul 2019 10:29:17: 23000000 INFO @ Fri, 05 Jul 2019 10:29:17: 23000000 INFO @ Fri, 05 Jul 2019 10:29:24: 24000000 INFO @ Fri, 05 Jul 2019 10:29:25: 24000000 INFO @ Fri, 05 Jul 2019 10:29:26: 24000000 INFO @ Fri, 05 Jul 2019 10:29:33: 25000000 INFO @ Fri, 05 Jul 2019 10:29:33: 25000000 INFO @ Fri, 05 Jul 2019 10:29:35: 25000000 INFO @ Fri, 05 Jul 2019 10:29:41: 26000000 INFO @ Fri, 05 Jul 2019 10:29:42: 26000000 INFO @ Fri, 05 Jul 2019 10:29:43: 26000000 INFO @ Fri, 05 Jul 2019 10:29:49: 27000000 INFO @ Fri, 05 Jul 2019 10:29:50: 27000000 INFO @ Fri, 05 Jul 2019 10:29:52: 27000000 INFO @ Fri, 05 Jul 2019 10:29:57: 28000000 INFO @ Fri, 05 Jul 2019 10:29:59: 28000000 INFO @ Fri, 05 Jul 2019 10:30:00: 28000000 INFO @ Fri, 05 Jul 2019 10:30:05: 29000000 INFO @ Fri, 05 Jul 2019 10:30:07: 29000000 INFO @ Fri, 05 Jul 2019 10:30:08: 29000000 INFO @ Fri, 05 Jul 2019 10:30:13: 30000000 INFO @ Fri, 05 Jul 2019 10:30:15: 30000000 INFO @ Fri, 05 Jul 2019 10:30:17: 30000000 INFO @ Fri, 05 Jul 2019 10:30:21: 31000000 INFO @ Fri, 05 Jul 2019 10:30:24: 31000000 INFO @ Fri, 05 Jul 2019 10:30:25: 31000000 INFO @ Fri, 05 Jul 2019 10:30:29: 32000000 INFO @ Fri, 05 Jul 2019 10:30:32: 32000000 INFO @ Fri, 05 Jul 2019 10:30:34: 32000000 INFO @ Fri, 05 Jul 2019 10:30:36: 33000000 INFO @ Fri, 05 Jul 2019 10:30:41: 33000000 INFO @ Fri, 05 Jul 2019 10:30:42: 33000000 INFO @ Fri, 05 Jul 2019 10:30:44: 34000000 INFO @ Fri, 05 Jul 2019 10:30:49: 34000000 INFO @ Fri, 05 Jul 2019 10:30:50: 34000000 INFO @ Fri, 05 Jul 2019 10:30:52: 35000000 INFO @ Fri, 05 Jul 2019 10:30:58: 35000000 INFO @ Fri, 05 Jul 2019 10:30:59: 35000000 INFO @ Fri, 05 Jul 2019 10:30:59: 36000000 INFO @ Fri, 05 Jul 2019 10:31:06: 36000000 INFO @ Fri, 05 Jul 2019 10:31:07: 36000000 INFO @ Fri, 05 Jul 2019 10:31:07: 37000000 INFO @ Fri, 05 Jul 2019 10:31:14: 37000000 INFO @ Fri, 05 Jul 2019 10:31:15: 38000000 INFO @ Fri, 05 Jul 2019 10:31:15: 37000000 INFO @ Fri, 05 Jul 2019 10:31:23: 38000000 INFO @ Fri, 05 Jul 2019 10:31:23: 39000000 INFO @ Fri, 05 Jul 2019 10:31:23: 38000000 INFO @ Fri, 05 Jul 2019 10:31:32: 40000000 INFO @ Fri, 05 Jul 2019 10:31:32: 39000000 INFO @ Fri, 05 Jul 2019 10:31:32: 39000000 INFO @ Fri, 05 Jul 2019 10:31:39: 41000000 INFO @ Fri, 05 Jul 2019 10:31:40: 40000000 INFO @ Fri, 05 Jul 2019 10:31:40: 40000000 INFO @ Fri, 05 Jul 2019 10:31:47: 42000000 INFO @ Fri, 05 Jul 2019 10:31:49: 41000000 INFO @ Fri, 05 Jul 2019 10:31:49: 41000000 INFO @ Fri, 05 Jul 2019 10:31:54: 43000000 INFO @ Fri, 05 Jul 2019 10:31:57: 42000000 INFO @ Fri, 05 Jul 2019 10:31:57: 42000000 INFO @ Fri, 05 Jul 2019 10:32:02: 44000000 INFO @ Fri, 05 Jul 2019 10:32:05: 43000000 INFO @ Fri, 05 Jul 2019 10:32:05: 43000000 INFO @ Fri, 05 Jul 2019 10:32:09: 45000000 INFO @ Fri, 05 Jul 2019 10:32:13: 44000000 INFO @ Fri, 05 Jul 2019 10:32:13: 44000000 INFO @ Fri, 05 Jul 2019 10:32:16: 46000000 INFO @ Fri, 05 Jul 2019 10:32:20: 45000000 INFO @ Fri, 05 Jul 2019 10:32:21: 45000000 INFO @ Fri, 05 Jul 2019 10:32:24: 47000000 INFO @ Fri, 05 Jul 2019 10:32:28: 46000000 INFO @ Fri, 05 Jul 2019 10:32:29: 46000000 INFO @ Fri, 05 Jul 2019 10:32:31: 48000000 INFO @ Fri, 05 Jul 2019 10:32:36: 47000000 INFO @ Fri, 05 Jul 2019 10:32:37: 47000000 INFO @ Fri, 05 Jul 2019 10:32:39: 49000000 INFO @ Fri, 05 Jul 2019 10:32:44: 48000000 INFO @ Fri, 05 Jul 2019 10:32:45: 48000000 INFO @ Fri, 05 Jul 2019 10:32:47: 50000000 INFO @ Fri, 05 Jul 2019 10:32:53: 49000000 INFO @ Fri, 05 Jul 2019 10:32:53: 49000000 INFO @ Fri, 05 Jul 2019 10:32:54: 51000000 INFO @ Fri, 05 Jul 2019 10:33:01: 50000000 INFO @ Fri, 05 Jul 2019 10:33:01: 50000000 INFO @ Fri, 05 Jul 2019 10:33:01: 52000000 INFO @ Fri, 05 Jul 2019 10:33:09: 53000000 INFO @ Fri, 05 Jul 2019 10:33:09: 51000000 INFO @ Fri, 05 Jul 2019 10:33:09: 51000000 INFO @ Fri, 05 Jul 2019 10:33:16: 54000000 INFO @ Fri, 05 Jul 2019 10:33:17: 52000000 INFO @ Fri, 05 Jul 2019 10:33:17: 52000000 INFO @ Fri, 05 Jul 2019 10:33:23: 55000000 INFO @ Fri, 05 Jul 2019 10:33:24: 53000000 INFO @ Fri, 05 Jul 2019 10:33:25: 53000000 INFO @ Fri, 05 Jul 2019 10:33:30: 56000000 INFO @ Fri, 05 Jul 2019 10:33:32: 54000000 INFO @ Fri, 05 Jul 2019 10:33:33: 54000000 INFO @ Fri, 05 Jul 2019 10:33:38: 57000000 INFO @ Fri, 05 Jul 2019 10:33:40: 55000000 INFO @ Fri, 05 Jul 2019 10:33:40: 55000000 INFO @ Fri, 05 Jul 2019 10:33:45: 58000000 INFO @ Fri, 05 Jul 2019 10:33:48: 56000000 INFO @ Fri, 05 Jul 2019 10:33:48: 56000000 INFO @ Fri, 05 Jul 2019 10:33:52: 59000000 INFO @ Fri, 05 Jul 2019 10:33:56: 57000000 INFO @ Fri, 05 Jul 2019 10:33:56: 57000000 INFO @ Fri, 05 Jul 2019 10:33:59: 60000000 INFO @ Fri, 05 Jul 2019 10:34:03: 58000000 INFO @ Fri, 05 Jul 2019 10:34:04: 58000000 INFO @ Fri, 05 Jul 2019 10:34:07: 61000000 INFO @ Fri, 05 Jul 2019 10:34:11: 59000000 INFO @ Fri, 05 Jul 2019 10:34:12: 59000000 INFO @ Fri, 05 Jul 2019 10:34:14: 62000000 INFO @ Fri, 05 Jul 2019 10:34:19: 60000000 INFO @ Fri, 05 Jul 2019 10:34:19: 60000000 INFO @ Fri, 05 Jul 2019 10:34:22: 63000000 INFO @ Fri, 05 Jul 2019 10:34:27: 61000000 INFO @ Fri, 05 Jul 2019 10:34:27: 61000000 INFO @ Fri, 05 Jul 2019 10:34:29: 64000000 INFO @ Fri, 05 Jul 2019 10:34:34: 62000000 INFO @ Fri, 05 Jul 2019 10:34:35: 62000000 INFO @ Fri, 05 Jul 2019 10:34:36: 65000000 INFO @ Fri, 05 Jul 2019 10:34:42: 63000000 INFO @ Fri, 05 Jul 2019 10:34:43: 63000000 INFO @ Fri, 05 Jul 2019 10:34:44: 66000000 INFO @ Fri, 05 Jul 2019 10:34:50: 64000000 INFO @ Fri, 05 Jul 2019 10:34:50: 64000000 INFO @ Fri, 05 Jul 2019 10:34:51: 67000000 INFO @ Fri, 05 Jul 2019 10:34:58: 65000000 INFO @ Fri, 05 Jul 2019 10:34:58: 68000000 INFO @ Fri, 05 Jul 2019 10:34:58: 65000000 INFO @ Fri, 05 Jul 2019 10:35:05: 69000000 INFO @ Fri, 05 Jul 2019 10:35:05: 66000000 INFO @ Fri, 05 Jul 2019 10:35:06: 66000000 INFO @ Fri, 05 Jul 2019 10:35:13: 70000000 INFO @ Fri, 05 Jul 2019 10:35:13: 67000000 INFO @ Fri, 05 Jul 2019 10:35:14: 67000000 INFO @ Fri, 05 Jul 2019 10:35:20: 71000000 INFO @ Fri, 05 Jul 2019 10:35:21: 68000000 INFO @ Fri, 05 Jul 2019 10:35:22: 68000000 INFO @ Fri, 05 Jul 2019 10:35:27: 72000000 INFO @ Fri, 05 Jul 2019 10:35:29: 69000000 INFO @ Fri, 05 Jul 2019 10:35:30: 69000000 INFO @ Fri, 05 Jul 2019 10:35:35: 73000000 INFO @ Fri, 05 Jul 2019 10:35:37: 70000000 INFO @ Fri, 05 Jul 2019 10:35:38: 70000000 INFO @ Fri, 05 Jul 2019 10:35:42: 74000000 INFO @ Fri, 05 Jul 2019 10:35:45: 71000000 INFO @ Fri, 05 Jul 2019 10:35:46: 71000000 INFO @ Fri, 05 Jul 2019 10:35:49: 75000000 INFO @ Fri, 05 Jul 2019 10:35:53: 72000000 INFO @ Fri, 05 Jul 2019 10:35:53: 72000000 INFO @ Fri, 05 Jul 2019 10:35:56: 76000000 INFO @ Fri, 05 Jul 2019 10:36:01: 73000000 INFO @ Fri, 05 Jul 2019 10:36:01: 73000000 INFO @ Fri, 05 Jul 2019 10:36:04: 77000000 INFO @ Fri, 05 Jul 2019 10:36:09: 74000000 INFO @ Fri, 05 Jul 2019 10:36:09: 74000000 INFO @ Fri, 05 Jul 2019 10:36:11: 78000000 INFO @ Fri, 05 Jul 2019 10:36:17: 75000000 INFO @ Fri, 05 Jul 2019 10:36:17: 75000000 INFO @ Fri, 05 Jul 2019 10:36:18: 79000000 INFO @ Fri, 05 Jul 2019 10:36:25: 76000000 INFO @ Fri, 05 Jul 2019 10:36:25: 76000000 INFO @ Fri, 05 Jul 2019 10:36:26: 80000000 INFO @ Fri, 05 Jul 2019 10:36:33: 77000000 INFO @ Fri, 05 Jul 2019 10:36:33: 81000000 INFO @ Fri, 05 Jul 2019 10:36:33: 77000000 INFO @ Fri, 05 Jul 2019 10:36:41: 82000000 INFO @ Fri, 05 Jul 2019 10:36:41: 78000000 INFO @ Fri, 05 Jul 2019 10:36:41: 78000000 INFO @ Fri, 05 Jul 2019 10:36:48: 83000000 INFO @ Fri, 05 Jul 2019 10:36:49: 79000000 INFO @ Fri, 05 Jul 2019 10:36:50: 79000000 INFO @ Fri, 05 Jul 2019 10:36:55: 84000000 INFO @ Fri, 05 Jul 2019 10:36:57: 80000000 INFO @ Fri, 05 Jul 2019 10:36:58: 80000000 INFO @ Fri, 05 Jul 2019 10:37:03: 85000000 INFO @ Fri, 05 Jul 2019 10:37:05: 81000000 INFO @ Fri, 05 Jul 2019 10:37:06: 81000000 INFO @ Fri, 05 Jul 2019 10:37:10: 86000000 INFO @ Fri, 05 Jul 2019 10:37:13: 82000000 INFO @ Fri, 05 Jul 2019 10:37:14: 82000000 INFO @ Fri, 05 Jul 2019 10:37:18: 87000000 INFO @ Fri, 05 Jul 2019 10:37:21: 83000000 INFO @ Fri, 05 Jul 2019 10:37:23: 83000000 INFO @ Fri, 05 Jul 2019 10:37:25: 88000000 INFO @ Fri, 05 Jul 2019 10:37:29: 84000000 INFO @ Fri, 05 Jul 2019 10:37:31: 84000000 INFO @ Fri, 05 Jul 2019 10:37:32: 89000000 INFO @ Fri, 05 Jul 2019 10:37:38: 85000000 INFO @ Fri, 05 Jul 2019 10:37:40: 85000000 INFO @ Fri, 05 Jul 2019 10:37:40: 90000000 INFO @ Fri, 05 Jul 2019 10:37:46: 86000000 INFO @ Fri, 05 Jul 2019 10:37:47: 91000000 INFO @ Fri, 05 Jul 2019 10:37:49: 86000000 INFO @ Fri, 05 Jul 2019 10:37:55: 92000000 INFO @ Fri, 05 Jul 2019 10:37:55: 87000000 INFO @ Fri, 05 Jul 2019 10:37:58: 87000000 INFO @ Fri, 05 Jul 2019 10:38:02: 93000000 INFO @ Fri, 05 Jul 2019 10:38:03: 88000000 INFO @ Fri, 05 Jul 2019 10:38:06: 88000000 INFO @ Fri, 05 Jul 2019 10:38:09: 94000000 INFO @ Fri, 05 Jul 2019 10:38:12: 89000000 INFO @ Fri, 05 Jul 2019 10:38:15: 89000000 INFO @ Fri, 05 Jul 2019 10:38:17: 95000000 INFO @ Fri, 05 Jul 2019 10:38:21: 90000000 INFO @ Fri, 05 Jul 2019 10:38:24: 90000000 INFO @ Fri, 05 Jul 2019 10:38:24: 96000000 INFO @ Fri, 05 Jul 2019 10:38:30: 91000000 INFO @ Fri, 05 Jul 2019 10:38:31: 97000000 INFO @ Fri, 05 Jul 2019 10:38:33: 91000000 INFO @ Fri, 05 Jul 2019 10:38:38: 92000000 INFO @ Fri, 05 Jul 2019 10:38:39: 98000000 INFO @ Fri, 05 Jul 2019 10:38:41: 92000000 INFO @ Fri, 05 Jul 2019 10:38:47: 99000000 INFO @ Fri, 05 Jul 2019 10:38:47: 93000000 INFO @ Fri, 05 Jul 2019 10:38:50: 93000000 INFO @ Fri, 05 Jul 2019 10:38:54: 100000000 INFO @ Fri, 05 Jul 2019 10:38:55: 94000000 INFO @ Fri, 05 Jul 2019 10:38:58: 94000000 INFO @ Fri, 05 Jul 2019 10:39:02: 101000000 INFO @ Fri, 05 Jul 2019 10:39:04: 95000000 INFO @ Fri, 05 Jul 2019 10:39:07: 95000000 INFO @ Fri, 05 Jul 2019 10:39:09: 102000000 INFO @ Fri, 05 Jul 2019 10:39:12: 96000000 INFO @ Fri, 05 Jul 2019 10:39:15: 96000000 INFO @ Fri, 05 Jul 2019 10:39:17: 103000000 INFO @ Fri, 05 Jul 2019 10:39:20: 97000000 INFO @ Fri, 05 Jul 2019 10:39:24: 97000000 INFO @ Fri, 05 Jul 2019 10:39:24: 104000000 INFO @ Fri, 05 Jul 2019 10:39:29: 98000000 INFO @ Fri, 05 Jul 2019 10:39:32: 98000000 INFO @ Fri, 05 Jul 2019 10:39:32: 105000000 INFO @ Fri, 05 Jul 2019 10:39:37: 99000000 INFO @ Fri, 05 Jul 2019 10:39:39: 106000000 INFO @ Fri, 05 Jul 2019 10:39:40: 99000000 INFO @ Fri, 05 Jul 2019 10:39:46: 100000000 INFO @ Fri, 05 Jul 2019 10:39:47: 107000000 INFO @ Fri, 05 Jul 2019 10:39:48: 100000000 INFO @ Fri, 05 Jul 2019 10:39:54: 101000000 INFO @ Fri, 05 Jul 2019 10:39:55: 108000000 INFO @ Fri, 05 Jul 2019 10:39:56: 101000000 INFO @ Fri, 05 Jul 2019 10:40:02: 102000000 INFO @ Fri, 05 Jul 2019 10:40:02: 109000000 INFO @ Fri, 05 Jul 2019 10:40:04: 102000000 INFO @ Fri, 05 Jul 2019 10:40:09: 110000000 INFO @ Fri, 05 Jul 2019 10:40:10: 103000000 INFO @ Fri, 05 Jul 2019 10:40:13: 103000000 INFO @ Fri, 05 Jul 2019 10:40:17: 111000000 INFO @ Fri, 05 Jul 2019 10:40:17: 104000000 INFO @ Fri, 05 Jul 2019 10:40:20: 104000000 INFO @ Fri, 05 Jul 2019 10:40:24: 112000000 INFO @ Fri, 05 Jul 2019 10:40:25: 105000000 INFO @ Fri, 05 Jul 2019 10:40:28: 105000000 INFO @ Fri, 05 Jul 2019 10:40:31: 113000000 INFO @ Fri, 05 Jul 2019 10:40:33: 106000000 INFO @ Fri, 05 Jul 2019 10:40:36: 106000000 INFO @ Fri, 05 Jul 2019 10:40:39: 114000000 INFO @ Fri, 05 Jul 2019 10:40:41: 107000000 INFO @ Fri, 05 Jul 2019 10:40:44: 107000000 INFO @ Fri, 05 Jul 2019 10:40:46: 115000000 INFO @ Fri, 05 Jul 2019 10:40:48: 108000000 INFO @ Fri, 05 Jul 2019 10:40:52: 108000000 INFO @ Fri, 05 Jul 2019 10:40:53: 116000000 INFO @ Fri, 05 Jul 2019 10:40:56: 109000000 INFO @ Fri, 05 Jul 2019 10:41:00: 109000000 INFO @ Fri, 05 Jul 2019 10:41:00: 117000000 INFO @ Fri, 05 Jul 2019 10:41:04: 110000000 INFO @ Fri, 05 Jul 2019 10:41:07: 110000000 INFO @ Fri, 05 Jul 2019 10:41:08: 118000000 INFO @ Fri, 05 Jul 2019 10:41:11: 111000000 INFO @ Fri, 05 Jul 2019 10:41:15: 119000000 INFO @ Fri, 05 Jul 2019 10:41:15: 111000000 INFO @ Fri, 05 Jul 2019 10:41:19: 112000000 INFO @ Fri, 05 Jul 2019 10:41:22: 120000000 INFO @ Fri, 05 Jul 2019 10:41:23: 112000000 INFO @ Fri, 05 Jul 2019 10:41:27: 113000000 INFO @ Fri, 05 Jul 2019 10:41:29: 121000000 INFO @ Fri, 05 Jul 2019 10:41:31: 113000000 INFO @ Fri, 05 Jul 2019 10:41:35: 114000000 INFO @ Fri, 05 Jul 2019 10:41:37: 122000000 INFO @ Fri, 05 Jul 2019 10:41:38: 114000000 INFO @ Fri, 05 Jul 2019 10:41:43: 115000000 INFO @ Fri, 05 Jul 2019 10:41:44: 123000000 INFO @ Fri, 05 Jul 2019 10:41:46: 115000000 INFO @ Fri, 05 Jul 2019 10:41:50: 116000000 INFO @ Fri, 05 Jul 2019 10:41:51: 124000000 INFO @ Fri, 05 Jul 2019 10:41:53: 116000000 INFO @ Fri, 05 Jul 2019 10:41:58: 117000000 INFO @ Fri, 05 Jul 2019 10:41:59: 125000000 INFO @ Fri, 05 Jul 2019 10:42:01: 117000000 INFO @ Fri, 05 Jul 2019 10:42:06: 118000000 INFO @ Fri, 05 Jul 2019 10:42:06: 126000000 INFO @ Fri, 05 Jul 2019 10:42:09: 118000000 INFO @ Fri, 05 Jul 2019 10:42:13: 119000000 INFO @ Fri, 05 Jul 2019 10:42:14: 127000000 INFO @ Fri, 05 Jul 2019 10:42:17: 119000000 INFO @ Fri, 05 Jul 2019 10:42:22: 128000000 INFO @ Fri, 05 Jul 2019 10:42:22: 120000000 INFO @ Fri, 05 Jul 2019 10:42:26: 120000000 INFO @ Fri, 05 Jul 2019 10:42:29: 129000000 INFO @ Fri, 05 Jul 2019 10:42:30: 121000000 INFO @ Fri, 05 Jul 2019 10:42:34: 121000000 INFO @ Fri, 05 Jul 2019 10:42:37: 130000000 INFO @ Fri, 05 Jul 2019 10:42:38: 122000000 INFO @ Fri, 05 Jul 2019 10:42:42: 122000000 INFO @ Fri, 05 Jul 2019 10:42:45: 131000000 INFO @ Fri, 05 Jul 2019 10:42:46: 123000000 INFO @ Fri, 05 Jul 2019 10:42:51: 123000000 INFO @ Fri, 05 Jul 2019 10:42:53: 132000000 INFO @ Fri, 05 Jul 2019 10:42:55: 124000000 INFO @ Fri, 05 Jul 2019 10:42:59: 124000000 INFO @ Fri, 05 Jul 2019 10:43:01: 133000000 INFO @ Fri, 05 Jul 2019 10:43:03: 125000000 INFO @ Fri, 05 Jul 2019 10:43:07: 125000000 INFO @ Fri, 05 Jul 2019 10:43:09: 134000000 INFO @ Fri, 05 Jul 2019 10:43:12: 126000000 INFO @ Fri, 05 Jul 2019 10:43:16: 126000000 INFO @ Fri, 05 Jul 2019 10:43:16: 135000000 INFO @ Fri, 05 Jul 2019 10:43:20: 127000000 INFO @ Fri, 05 Jul 2019 10:43:24: 127000000 INFO @ Fri, 05 Jul 2019 10:43:24: 136000000 INFO @ Fri, 05 Jul 2019 10:43:28: 128000000 INFO @ Fri, 05 Jul 2019 10:43:33: 128000000 INFO @ Fri, 05 Jul 2019 10:43:33: 137000000 INFO @ Fri, 05 Jul 2019 10:43:37: 129000000 INFO @ Fri, 05 Jul 2019 10:43:41: 129000000 INFO @ Fri, 05 Jul 2019 10:43:41: 138000000 INFO @ Fri, 05 Jul 2019 10:43:45: 130000000 INFO @ Fri, 05 Jul 2019 10:43:49: 139000000 INFO @ Fri, 05 Jul 2019 10:43:49: 130000000 INFO @ Fri, 05 Jul 2019 10:43:53: 131000000 INFO @ Fri, 05 Jul 2019 10:43:57: 140000000 INFO @ Fri, 05 Jul 2019 10:43:57: 131000000 INFO @ Fri, 05 Jul 2019 10:44:01: 132000000 INFO @ Fri, 05 Jul 2019 10:44:04: 132000000 INFO @ Fri, 05 Jul 2019 10:44:04: 141000000 INFO @ Fri, 05 Jul 2019 10:44:09: 133000000 INFO @ Fri, 05 Jul 2019 10:44:12: 142000000 INFO @ Fri, 05 Jul 2019 10:44:13: 133000000 INFO @ Fri, 05 Jul 2019 10:44:17: 134000000 INFO @ Fri, 05 Jul 2019 10:44:20: 143000000 INFO @ Fri, 05 Jul 2019 10:44:20: 134000000 INFO @ Fri, 05 Jul 2019 10:44:25: 135000000 INFO @ Fri, 05 Jul 2019 10:44:27: 144000000 INFO @ Fri, 05 Jul 2019 10:44:28: 135000000 INFO @ Fri, 05 Jul 2019 10:44:33: 136000000 INFO @ Fri, 05 Jul 2019 10:44:34: 145000000 INFO @ Fri, 05 Jul 2019 10:44:36: 136000000 INFO @ Fri, 05 Jul 2019 10:44:39: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:44:39: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:44:39: #1 total tags in treatment: 145293711 INFO @ Fri, 05 Jul 2019 10:44:39: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:44:39: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:44:40: 137000000 INFO @ Fri, 05 Jul 2019 10:44:42: #1 tags after filtering in treatment: 145293673 INFO @ Fri, 05 Jul 2019 10:44:42: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:44:42: #1 finished! INFO @ Fri, 05 Jul 2019 10:44:42: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:44:42: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:44:44: 137000000 INFO @ Fri, 05 Jul 2019 10:44:49: 138000000 INFO @ Fri, 05 Jul 2019 10:44:51: 138000000 INFO @ Fri, 05 Jul 2019 10:44:56: #2 number of paired peaks: 8851 INFO @ Fri, 05 Jul 2019 10:44:56: start model_add_line... INFO @ Fri, 05 Jul 2019 10:44:57: 139000000 INFO @ Fri, 05 Jul 2019 10:44:57: start X-correlation... INFO @ Fri, 05 Jul 2019 10:44:57: end of X-cor INFO @ Fri, 05 Jul 2019 10:44:57: #2 finished! INFO @ Fri, 05 Jul 2019 10:44:57: #2 predicted fragment length is 113 bps INFO @ Fri, 05 Jul 2019 10:44:57: #2 alternative fragment length(s) may be 3,113 bps INFO @ Fri, 05 Jul 2019 10:44:57: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.10_model.r INFO @ Fri, 05 Jul 2019 10:44:57: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:44:57: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:44:59: 139000000 INFO @ Fri, 05 Jul 2019 10:45:05: 140000000 INFO @ Fri, 05 Jul 2019 10:45:08: 140000000 INFO @ Fri, 05 Jul 2019 10:45:14: 141000000 INFO @ Fri, 05 Jul 2019 10:45:16: 141000000 INFO @ Fri, 05 Jul 2019 10:45:22: 142000000 INFO @ Fri, 05 Jul 2019 10:45:24: 142000000 INFO @ Fri, 05 Jul 2019 10:45:29: 143000000 INFO @ Fri, 05 Jul 2019 10:45:34: 143000000 INFO @ Fri, 05 Jul 2019 10:45:37: 144000000 INFO @ Fri, 05 Jul 2019 10:45:42: 144000000 INFO @ Fri, 05 Jul 2019 10:45:45: 145000000 INFO @ Fri, 05 Jul 2019 10:45:49: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:45:49: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:45:49: #1 total tags in treatment: 145293711 INFO @ Fri, 05 Jul 2019 10:45:49: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:45:49: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:45:50: 145000000 INFO @ Fri, 05 Jul 2019 10:45:52: #1 tags after filtering in treatment: 145293673 INFO @ Fri, 05 Jul 2019 10:45:52: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:45:52: #1 finished! INFO @ Fri, 05 Jul 2019 10:45:52: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:45:52: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:45:54: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:45:54: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:45:54: #1 total tags in treatment: 145293711 INFO @ Fri, 05 Jul 2019 10:45:54: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:45:54: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:45:57: #1 tags after filtering in treatment: 145293673 INFO @ Fri, 05 Jul 2019 10:45:57: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:45:57: #1 finished! INFO @ Fri, 05 Jul 2019 10:45:57: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:45:57: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:46:06: #2 number of paired peaks: 8851 INFO @ Fri, 05 Jul 2019 10:46:06: start model_add_line... INFO @ Fri, 05 Jul 2019 10:46:08: start X-correlation... INFO @ Fri, 05 Jul 2019 10:46:08: end of X-cor INFO @ Fri, 05 Jul 2019 10:46:08: #2 finished! INFO @ Fri, 05 Jul 2019 10:46:08: #2 predicted fragment length is 113 bps INFO @ Fri, 05 Jul 2019 10:46:08: #2 alternative fragment length(s) may be 3,113 bps INFO @ Fri, 05 Jul 2019 10:46:08: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.20_model.r INFO @ Fri, 05 Jul 2019 10:46:08: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:46:08: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:46:12: #2 number of paired peaks: 8851 INFO @ Fri, 05 Jul 2019 10:46:12: start model_add_line... INFO @ Fri, 05 Jul 2019 10:46:13: start X-correlation... INFO @ Fri, 05 Jul 2019 10:46:13: end of X-cor INFO @ Fri, 05 Jul 2019 10:46:13: #2 finished! INFO @ Fri, 05 Jul 2019 10:46:13: #2 predicted fragment length is 113 bps INFO @ Fri, 05 Jul 2019 10:46:13: #2 alternative fragment length(s) may be 3,113 bps INFO @ Fri, 05 Jul 2019 10:46:13: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.05_model.r INFO @ Fri, 05 Jul 2019 10:46:13: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:46:13: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:52:17: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:53:33: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:53:38: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:56:11: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.10_peaks.xls INFO @ Fri, 05 Jul 2019 10:56:11: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:56:11: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.10_summits.bed INFO @ Fri, 05 Jul 2019 10:56:11: Done! pass1 - making usageList (92 chroms): 2 millis pass2 - checking and writing primary data (5123 records, 4 fields): 12 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 10:57:37: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.20_peaks.xls INFO @ Fri, 05 Jul 2019 10:57:37: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:57:37: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.20_summits.bed INFO @ Fri, 05 Jul 2019 10:57:37: Done! pass1 - making usageList (49 chroms): 2 millis pass2 - checking and writing primary data (1017 records, 4 fields): 6 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 10:57:40: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.05_peaks.xls INFO @ Fri, 05 Jul 2019 10:57:40: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:57:40: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101892/ERX101892.05_summits.bed INFO @ Fri, 05 Jul 2019 10:57:41: Done! pass1 - making usageList (157 chroms): 5 millis pass2 - checking and writing primary data (20527 records, 4 fields): 31 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。