Job ID = 2001541 sra ファイルのダウンロード中... Read layout: SINGLE fastq に変換中... 2019-07-04T19:32:38 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:33:24 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:41:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:41:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:41:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:54:50 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T19:57:46 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:03:41 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:03:41 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:04:34 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:05:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:05:42 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:11:04 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:12:39 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:12:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:12:43 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:12:49 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) 2019-07-04T20:31:46 fasterq-dump.2.9.6 sys: timeout exhausted while reading file within network system module - mbedtls_ssl_read returned -76 ( NET - Reading information from the socket failed ) spots read : 177,242,583 reads read : 177,242,583 reads written : 177,242,583 rm: cannot remove ‘[DSE]RR*’: No such file or directory fastq に変換しました。 bowtie でマッピング中... Time loading reference: 00:00:01 Time loading forward index: 00:00:00 Time loading mirror index: 00:00:01 Multiseed full-index search: 02:34:48 177242583 reads; of these: 177242583 (100.00%) were unpaired; of these: 7387074 (4.17%) aligned 0 times 123678464 (69.78%) aligned exactly 1 time 46177045 (26.05%) aligned >1 times 95.83% overall alignment rate Time searching: 02:34:50 Overall time: 02:34:50 マッピングが完了しました。 samtools でBAM に変換中... [samopen] SAM header is present: 953 sequences. [bam_sort_core] merging from 72 files... [bam_rmdupse_core] 24968222 / 169855509 = 0.1470 in library ' ' BAM に変換しました。 Bed ファイルを作成中... BedGraph に変換中... INFO @ Fri, 05 Jul 2019 09:52:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.10 -q 1e-10 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.10 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-10 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:52:03: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:52:03: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:52:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.05 -q 1e-05 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.05 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-05 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:52:03: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:52:03: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:52:03: # Command line: callpeak -t /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.bam -f BAM -g 2.15e9 -n /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.20 -q 1e-20 # ARGUMENTS LIST: # name = /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.20 # format = BAM # ChIP-seq file = ['/home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.bam'] # control file = None # effective genome size = 2.15e+09 # band width = 300 # model fold = [5, 50] # qvalue cutoff = 1.00e-20 # Larger dataset will be scaled towards smaller dataset. # Range for calculating regional lambda is: 10000 bps # Broad region calling is off # Paired-End mode is off INFO @ Fri, 05 Jul 2019 09:52:03: #1 read tag files... INFO @ Fri, 05 Jul 2019 09:52:03: #1 read treatment tags... INFO @ Fri, 05 Jul 2019 09:52:12: 1000000 INFO @ Fri, 05 Jul 2019 09:52:12: 1000000 INFO @ Fri, 05 Jul 2019 09:52:12: 1000000 INFO @ Fri, 05 Jul 2019 09:52:20: 2000000 INFO @ Fri, 05 Jul 2019 09:52:22: 2000000 INFO @ Fri, 05 Jul 2019 09:52:22: 2000000 INFO @ Fri, 05 Jul 2019 09:52:28: 3000000 INFO @ Fri, 05 Jul 2019 09:52:31: 3000000 INFO @ Fri, 05 Jul 2019 09:52:31: 3000000 INFO @ Fri, 05 Jul 2019 09:52:37: 4000000 INFO @ Fri, 05 Jul 2019 09:52:39: 4000000 INFO @ Fri, 05 Jul 2019 09:52:39: 4000000 INFO @ Fri, 05 Jul 2019 09:52:45: 5000000 INFO @ Fri, 05 Jul 2019 09:52:48: 5000000 INFO @ Fri, 05 Jul 2019 09:52:48: 5000000 INFO @ Fri, 05 Jul 2019 09:52:53: 6000000 INFO @ Fri, 05 Jul 2019 09:52:56: 6000000 INFO @ Fri, 05 Jul 2019 09:52:57: 6000000 INFO @ Fri, 05 Jul 2019 09:53:02: 7000000 INFO @ Fri, 05 Jul 2019 09:53:05: 7000000 INFO @ Fri, 05 Jul 2019 09:53:06: 7000000 INFO @ Fri, 05 Jul 2019 09:53:10: 8000000 INFO @ Fri, 05 Jul 2019 09:53:13: 8000000 INFO @ Fri, 05 Jul 2019 09:53:14: 8000000 INFO @ Fri, 05 Jul 2019 09:53:18: 9000000 INFO @ Fri, 05 Jul 2019 09:53:22: 9000000 INFO @ Fri, 05 Jul 2019 09:53:23: 9000000 INFO @ Fri, 05 Jul 2019 09:53:26: 10000000 INFO @ Fri, 05 Jul 2019 09:53:30: 10000000 INFO @ Fri, 05 Jul 2019 09:53:31: 10000000 INFO @ Fri, 05 Jul 2019 09:53:35: 11000000 INFO @ Fri, 05 Jul 2019 09:53:38: 11000000 INFO @ Fri, 05 Jul 2019 09:53:40: 11000000 INFO @ Fri, 05 Jul 2019 09:53:43: 12000000 INFO @ Fri, 05 Jul 2019 09:53:47: 12000000 INFO @ Fri, 05 Jul 2019 09:53:48: 12000000 INFO @ Fri, 05 Jul 2019 09:53:51: 13000000 INFO @ Fri, 05 Jul 2019 09:53:56: 13000000 INFO @ Fri, 05 Jul 2019 09:53:57: 13000000 INFO @ Fri, 05 Jul 2019 09:53:59: 14000000 INFO @ Fri, 05 Jul 2019 09:54:04: 14000000 INFO @ Fri, 05 Jul 2019 09:54:05: 14000000 INFO @ Fri, 05 Jul 2019 09:54:07: 15000000 INFO @ Fri, 05 Jul 2019 09:54:12: 15000000 INFO @ Fri, 05 Jul 2019 09:54:14: 15000000 INFO @ Fri, 05 Jul 2019 09:54:16: 16000000 INFO @ Fri, 05 Jul 2019 09:54:20: 16000000 INFO @ Fri, 05 Jul 2019 09:54:23: 16000000 INFO @ Fri, 05 Jul 2019 09:54:23: 17000000 INFO @ Fri, 05 Jul 2019 09:54:28: 17000000 INFO @ Fri, 05 Jul 2019 09:54:30: 17000000 INFO @ Fri, 05 Jul 2019 09:54:30: 18000000 INFO @ Fri, 05 Jul 2019 09:54:36: 18000000 INFO @ Fri, 05 Jul 2019 09:54:39: 19000000 INFO @ Fri, 05 Jul 2019 09:54:39: 18000000 INFO @ Fri, 05 Jul 2019 09:54:44: 19000000 INFO @ Fri, 05 Jul 2019 09:54:47: 20000000 INFO @ Fri, 05 Jul 2019 09:54:48: 19000000 INFO @ Fri, 05 Jul 2019 09:54:53: 20000000 INFO @ Fri, 05 Jul 2019 09:54:55: 21000000 INFO @ Fri, 05 Jul 2019 09:54:56: 20000000 INFO @ Fri, 05 Jul 2019 09:55:02: 21000000 INFO @ Fri, 05 Jul 2019 09:55:03: 22000000 INFO @ Fri, 05 Jul 2019 09:55:05: 21000000 INFO @ Fri, 05 Jul 2019 09:55:10: 22000000 INFO @ Fri, 05 Jul 2019 09:55:11: 23000000 INFO @ Fri, 05 Jul 2019 09:55:13: 22000000 INFO @ Fri, 05 Jul 2019 09:55:18: 23000000 INFO @ Fri, 05 Jul 2019 09:55:19: 24000000 INFO @ Fri, 05 Jul 2019 09:55:22: 23000000 INFO @ Fri, 05 Jul 2019 09:55:26: 24000000 INFO @ Fri, 05 Jul 2019 09:55:27: 25000000 INFO @ Fri, 05 Jul 2019 09:55:31: 24000000 INFO @ Fri, 05 Jul 2019 09:55:35: 25000000 INFO @ Fri, 05 Jul 2019 09:55:36: 26000000 INFO @ Fri, 05 Jul 2019 09:55:40: 25000000 INFO @ Fri, 05 Jul 2019 09:55:44: 26000000 INFO @ Fri, 05 Jul 2019 09:55:45: 27000000 INFO @ Fri, 05 Jul 2019 09:55:49: 26000000 INFO @ Fri, 05 Jul 2019 09:55:52: 27000000 INFO @ Fri, 05 Jul 2019 09:55:53: 28000000 INFO @ Fri, 05 Jul 2019 09:55:58: 27000000 INFO @ Fri, 05 Jul 2019 09:56:00: 28000000 INFO @ Fri, 05 Jul 2019 09:56:01: 29000000 INFO @ Fri, 05 Jul 2019 09:56:07: 28000000 INFO @ Fri, 05 Jul 2019 09:56:09: 29000000 INFO @ Fri, 05 Jul 2019 09:56:09: 30000000 INFO @ Fri, 05 Jul 2019 09:56:16: 29000000 INFO @ Fri, 05 Jul 2019 09:56:17: 30000000 INFO @ Fri, 05 Jul 2019 09:56:18: 31000000 INFO @ Fri, 05 Jul 2019 09:56:25: 30000000 INFO @ Fri, 05 Jul 2019 09:56:26: 31000000 INFO @ Fri, 05 Jul 2019 09:56:26: 32000000 INFO @ Fri, 05 Jul 2019 09:56:34: 31000000 INFO @ Fri, 05 Jul 2019 09:56:34: 33000000 INFO @ Fri, 05 Jul 2019 09:56:34: 32000000 INFO @ Fri, 05 Jul 2019 09:56:42: 34000000 INFO @ Fri, 05 Jul 2019 09:56:42: 33000000 INFO @ Fri, 05 Jul 2019 09:56:43: 32000000 INFO @ Fri, 05 Jul 2019 09:56:50: 35000000 INFO @ Fri, 05 Jul 2019 09:56:51: 34000000 INFO @ Fri, 05 Jul 2019 09:56:51: 33000000 INFO @ Fri, 05 Jul 2019 09:56:59: 36000000 INFO @ Fri, 05 Jul 2019 09:56:59: 35000000 INFO @ Fri, 05 Jul 2019 09:57:00: 34000000 INFO @ Fri, 05 Jul 2019 09:57:07: 37000000 INFO @ Fri, 05 Jul 2019 09:57:08: 36000000 INFO @ Fri, 05 Jul 2019 09:57:09: 35000000 INFO @ Fri, 05 Jul 2019 09:57:15: 38000000 INFO @ Fri, 05 Jul 2019 09:57:16: 37000000 INFO @ Fri, 05 Jul 2019 09:57:17: 36000000 INFO @ Fri, 05 Jul 2019 09:57:23: 39000000 INFO @ Fri, 05 Jul 2019 09:57:24: 38000000 INFO @ Fri, 05 Jul 2019 09:57:26: 37000000 INFO @ Fri, 05 Jul 2019 09:57:31: 40000000 INFO @ Fri, 05 Jul 2019 09:57:33: 39000000 INFO @ Fri, 05 Jul 2019 09:57:34: 38000000 INFO @ Fri, 05 Jul 2019 09:57:39: 41000000 INFO @ Fri, 05 Jul 2019 09:57:40: 40000000 INFO @ Fri, 05 Jul 2019 09:57:43: 39000000 INFO @ Fri, 05 Jul 2019 09:57:47: 42000000 INFO @ Fri, 05 Jul 2019 09:57:49: 41000000 INFO @ Fri, 05 Jul 2019 09:57:51: 40000000 INFO @ Fri, 05 Jul 2019 09:57:55: 43000000 INFO @ Fri, 05 Jul 2019 09:57:57: 42000000 INFO @ Fri, 05 Jul 2019 09:58:00: 41000000 INFO @ Fri, 05 Jul 2019 09:58:03: 44000000 INFO @ Fri, 05 Jul 2019 09:58:05: 43000000 INFO @ Fri, 05 Jul 2019 09:58:09: 42000000 INFO @ Fri, 05 Jul 2019 09:58:11: 45000000 INFO @ Fri, 05 Jul 2019 09:58:13: 44000000 INFO @ Fri, 05 Jul 2019 09:58:18: 43000000 INFO @ Fri, 05 Jul 2019 09:58:20: 46000000 INFO @ Fri, 05 Jul 2019 09:58:21: 45000000 INFO @ Fri, 05 Jul 2019 09:58:26: 44000000 INFO @ Fri, 05 Jul 2019 09:58:28: 47000000 INFO @ Fri, 05 Jul 2019 09:58:28: 46000000 INFO @ Fri, 05 Jul 2019 09:58:35: 45000000 INFO @ Fri, 05 Jul 2019 09:58:36: 48000000 INFO @ Fri, 05 Jul 2019 09:58:36: 47000000 INFO @ Fri, 05 Jul 2019 09:58:44: 49000000 INFO @ Fri, 05 Jul 2019 09:58:44: 46000000 INFO @ Fri, 05 Jul 2019 09:58:44: 48000000 INFO @ Fri, 05 Jul 2019 09:58:52: 50000000 INFO @ Fri, 05 Jul 2019 09:58:52: 49000000 INFO @ Fri, 05 Jul 2019 09:58:53: 47000000 INFO @ Fri, 05 Jul 2019 09:59:00: 51000000 INFO @ Fri, 05 Jul 2019 09:59:01: 50000000 INFO @ Fri, 05 Jul 2019 09:59:01: 48000000 INFO @ Fri, 05 Jul 2019 09:59:08: 52000000 INFO @ Fri, 05 Jul 2019 09:59:10: 49000000 INFO @ Fri, 05 Jul 2019 09:59:10: 51000000 INFO @ Fri, 05 Jul 2019 09:59:17: 53000000 INFO @ Fri, 05 Jul 2019 09:59:18: 50000000 INFO @ Fri, 05 Jul 2019 09:59:18: 52000000 INFO @ Fri, 05 Jul 2019 09:59:25: 54000000 INFO @ Fri, 05 Jul 2019 09:59:26: 53000000 INFO @ Fri, 05 Jul 2019 09:59:26: 51000000 INFO @ Fri, 05 Jul 2019 09:59:32: 55000000 INFO @ Fri, 05 Jul 2019 09:59:34: 54000000 INFO @ Fri, 05 Jul 2019 09:59:35: 52000000 INFO @ Fri, 05 Jul 2019 09:59:41: 56000000 INFO @ Fri, 05 Jul 2019 09:59:45: 55000000 INFO @ Fri, 05 Jul 2019 09:59:45: 53000000 INFO @ Fri, 05 Jul 2019 09:59:49: 57000000 INFO @ Fri, 05 Jul 2019 09:59:53: 56000000 INFO @ Fri, 05 Jul 2019 09:59:54: 54000000 INFO @ Fri, 05 Jul 2019 09:59:57: 58000000 INFO @ Fri, 05 Jul 2019 10:00:01: 57000000 INFO @ Fri, 05 Jul 2019 10:00:02: 55000000 INFO @ Fri, 05 Jul 2019 10:00:05: 59000000 INFO @ Fri, 05 Jul 2019 10:00:09: 58000000 INFO @ Fri, 05 Jul 2019 10:00:11: 56000000 INFO @ Fri, 05 Jul 2019 10:00:13: 60000000 INFO @ Fri, 05 Jul 2019 10:00:17: 59000000 INFO @ Fri, 05 Jul 2019 10:00:19: 57000000 INFO @ Fri, 05 Jul 2019 10:00:21: 61000000 INFO @ Fri, 05 Jul 2019 10:00:25: 60000000 INFO @ Fri, 05 Jul 2019 10:00:28: 58000000 INFO @ Fri, 05 Jul 2019 10:00:29: 62000000 INFO @ Fri, 05 Jul 2019 10:00:33: 61000000 INFO @ Fri, 05 Jul 2019 10:00:36: 59000000 INFO @ Fri, 05 Jul 2019 10:00:37: 63000000 INFO @ Fri, 05 Jul 2019 10:00:41: 62000000 INFO @ Fri, 05 Jul 2019 10:00:45: 64000000 INFO @ Fri, 05 Jul 2019 10:00:45: 60000000 INFO @ Fri, 05 Jul 2019 10:00:49: 63000000 INFO @ Fri, 05 Jul 2019 10:00:54: 65000000 INFO @ Fri, 05 Jul 2019 10:00:55: 61000000 INFO @ Fri, 05 Jul 2019 10:00:57: 64000000 INFO @ Fri, 05 Jul 2019 10:01:02: 66000000 INFO @ Fri, 05 Jul 2019 10:01:03: 62000000 INFO @ Fri, 05 Jul 2019 10:01:05: 65000000 INFO @ Fri, 05 Jul 2019 10:01:11: 67000000 INFO @ Fri, 05 Jul 2019 10:01:12: 63000000 INFO @ Fri, 05 Jul 2019 10:01:13: 66000000 INFO @ Fri, 05 Jul 2019 10:01:20: 68000000 INFO @ Fri, 05 Jul 2019 10:01:20: 64000000 INFO @ Fri, 05 Jul 2019 10:01:21: 67000000 INFO @ Fri, 05 Jul 2019 10:01:28: 65000000 INFO @ Fri, 05 Jul 2019 10:01:28: 69000000 INFO @ Fri, 05 Jul 2019 10:01:29: 68000000 INFO @ Fri, 05 Jul 2019 10:01:36: 66000000 INFO @ Fri, 05 Jul 2019 10:01:37: 70000000 INFO @ Fri, 05 Jul 2019 10:01:37: 69000000 INFO @ Fri, 05 Jul 2019 10:01:45: 67000000 INFO @ Fri, 05 Jul 2019 10:01:46: 71000000 INFO @ Fri, 05 Jul 2019 10:01:46: 70000000 INFO @ Fri, 05 Jul 2019 10:01:54: 68000000 INFO @ Fri, 05 Jul 2019 10:01:54: 72000000 INFO @ Fri, 05 Jul 2019 10:01:55: 71000000 INFO @ Fri, 05 Jul 2019 10:02:03: 69000000 INFO @ Fri, 05 Jul 2019 10:02:03: 73000000 INFO @ Fri, 05 Jul 2019 10:02:04: 72000000 INFO @ Fri, 05 Jul 2019 10:02:13: 70000000 INFO @ Fri, 05 Jul 2019 10:02:13: 74000000 INFO @ Fri, 05 Jul 2019 10:02:14: 73000000 INFO @ Fri, 05 Jul 2019 10:02:23: 71000000 INFO @ Fri, 05 Jul 2019 10:02:23: 75000000 INFO @ Fri, 05 Jul 2019 10:02:24: 74000000 INFO @ Fri, 05 Jul 2019 10:02:33: 72000000 INFO @ Fri, 05 Jul 2019 10:02:33: 76000000 INFO @ Fri, 05 Jul 2019 10:02:34: 75000000 INFO @ Fri, 05 Jul 2019 10:02:43: 73000000 INFO @ Fri, 05 Jul 2019 10:02:43: 77000000 INFO @ Fri, 05 Jul 2019 10:02:44: 76000000 INFO @ Fri, 05 Jul 2019 10:02:52: 78000000 INFO @ Fri, 05 Jul 2019 10:02:53: 74000000 INFO @ Fri, 05 Jul 2019 10:02:53: 77000000 INFO @ Fri, 05 Jul 2019 10:03:01: 79000000 INFO @ Fri, 05 Jul 2019 10:03:01: 75000000 INFO @ Fri, 05 Jul 2019 10:03:01: 78000000 INFO @ Fri, 05 Jul 2019 10:03:09: 80000000 INFO @ Fri, 05 Jul 2019 10:03:09: 79000000 INFO @ Fri, 05 Jul 2019 10:03:09: 76000000 INFO @ Fri, 05 Jul 2019 10:03:17: 81000000 INFO @ Fri, 05 Jul 2019 10:03:18: 80000000 INFO @ Fri, 05 Jul 2019 10:03:18: 77000000 INFO @ Fri, 05 Jul 2019 10:03:25: 82000000 INFO @ Fri, 05 Jul 2019 10:03:27: 78000000 INFO @ Fri, 05 Jul 2019 10:03:27: 81000000 INFO @ Fri, 05 Jul 2019 10:03:34: 83000000 INFO @ Fri, 05 Jul 2019 10:03:36: 79000000 INFO @ Fri, 05 Jul 2019 10:03:36: 82000000 INFO @ Fri, 05 Jul 2019 10:03:42: 84000000 INFO @ Fri, 05 Jul 2019 10:03:44: 80000000 INFO @ Fri, 05 Jul 2019 10:03:45: 83000000 INFO @ Fri, 05 Jul 2019 10:03:51: 85000000 INFO @ Fri, 05 Jul 2019 10:03:53: 81000000 INFO @ Fri, 05 Jul 2019 10:03:55: 84000000 INFO @ Fri, 05 Jul 2019 10:03:59: 86000000 INFO @ Fri, 05 Jul 2019 10:04:01: 82000000 INFO @ Fri, 05 Jul 2019 10:04:04: 85000000 INFO @ Fri, 05 Jul 2019 10:04:07: 87000000 INFO @ Fri, 05 Jul 2019 10:04:10: 83000000 INFO @ Fri, 05 Jul 2019 10:04:13: 86000000 INFO @ Fri, 05 Jul 2019 10:04:15: 88000000 INFO @ Fri, 05 Jul 2019 10:04:19: 84000000 INFO @ Fri, 05 Jul 2019 10:04:23: 87000000 INFO @ Fri, 05 Jul 2019 10:04:24: 89000000 INFO @ Fri, 05 Jul 2019 10:04:28: 85000000 INFO @ Fri, 05 Jul 2019 10:04:32: 88000000 INFO @ Fri, 05 Jul 2019 10:04:33: 90000000 INFO @ Fri, 05 Jul 2019 10:04:37: 86000000 INFO @ Fri, 05 Jul 2019 10:04:42: 89000000 INFO @ Fri, 05 Jul 2019 10:04:42: 91000000 INFO @ Fri, 05 Jul 2019 10:04:46: 87000000 INFO @ Fri, 05 Jul 2019 10:04:51: 92000000 INFO @ Fri, 05 Jul 2019 10:04:51: 90000000 INFO @ Fri, 05 Jul 2019 10:04:55: 88000000 INFO @ Fri, 05 Jul 2019 10:05:00: 93000000 INFO @ Fri, 05 Jul 2019 10:05:01: 91000000 INFO @ Fri, 05 Jul 2019 10:05:03: 89000000 INFO @ Fri, 05 Jul 2019 10:05:08: 94000000 INFO @ Fri, 05 Jul 2019 10:05:10: 92000000 INFO @ Fri, 05 Jul 2019 10:05:12: 90000000 INFO @ Fri, 05 Jul 2019 10:05:17: 95000000 INFO @ Fri, 05 Jul 2019 10:05:19: 93000000 INFO @ Fri, 05 Jul 2019 10:05:20: 91000000 INFO @ Fri, 05 Jul 2019 10:05:26: 96000000 INFO @ Fri, 05 Jul 2019 10:05:28: 94000000 INFO @ Fri, 05 Jul 2019 10:05:29: 92000000 INFO @ Fri, 05 Jul 2019 10:05:35: 97000000 INFO @ Fri, 05 Jul 2019 10:05:38: 95000000 INFO @ Fri, 05 Jul 2019 10:05:39: 93000000 INFO @ Fri, 05 Jul 2019 10:05:43: 98000000 INFO @ Fri, 05 Jul 2019 10:05:47: 96000000 INFO @ Fri, 05 Jul 2019 10:05:49: 94000000 INFO @ Fri, 05 Jul 2019 10:05:52: 99000000 INFO @ Fri, 05 Jul 2019 10:05:57: 97000000 INFO @ Fri, 05 Jul 2019 10:05:58: 95000000 INFO @ Fri, 05 Jul 2019 10:06:00: 100000000 INFO @ Fri, 05 Jul 2019 10:06:07: 98000000 INFO @ Fri, 05 Jul 2019 10:06:08: 96000000 INFO @ Fri, 05 Jul 2019 10:06:08: 101000000 INFO @ Fri, 05 Jul 2019 10:06:16: 99000000 INFO @ Fri, 05 Jul 2019 10:06:17: 102000000 INFO @ Fri, 05 Jul 2019 10:06:17: 97000000 INFO @ Fri, 05 Jul 2019 10:06:25: 103000000 INFO @ Fri, 05 Jul 2019 10:06:26: 100000000 INFO @ Fri, 05 Jul 2019 10:06:27: 98000000 INFO @ Fri, 05 Jul 2019 10:06:33: 104000000 INFO @ Fri, 05 Jul 2019 10:06:35: 101000000 INFO @ Fri, 05 Jul 2019 10:06:36: 99000000 INFO @ Fri, 05 Jul 2019 10:06:42: 105000000 INFO @ Fri, 05 Jul 2019 10:06:47: 102000000 INFO @ Fri, 05 Jul 2019 10:06:47: 100000000 INFO @ Fri, 05 Jul 2019 10:06:50: 106000000 INFO @ Fri, 05 Jul 2019 10:06:56: 103000000 INFO @ Fri, 05 Jul 2019 10:06:56: 101000000 INFO @ Fri, 05 Jul 2019 10:06:58: 107000000 INFO @ Fri, 05 Jul 2019 10:07:05: 104000000 INFO @ Fri, 05 Jul 2019 10:07:05: 102000000 INFO @ Fri, 05 Jul 2019 10:07:06: 108000000 INFO @ Fri, 05 Jul 2019 10:07:14: 105000000 INFO @ Fri, 05 Jul 2019 10:07:15: 109000000 INFO @ Fri, 05 Jul 2019 10:07:15: 103000000 INFO @ Fri, 05 Jul 2019 10:07:23: 110000000 INFO @ Fri, 05 Jul 2019 10:07:25: 106000000 INFO @ Fri, 05 Jul 2019 10:07:25: 104000000 INFO @ Fri, 05 Jul 2019 10:07:31: 111000000 INFO @ Fri, 05 Jul 2019 10:07:34: 107000000 INFO @ Fri, 05 Jul 2019 10:07:35: 105000000 INFO @ Fri, 05 Jul 2019 10:07:40: 112000000 INFO @ Fri, 05 Jul 2019 10:07:45: 108000000 INFO @ Fri, 05 Jul 2019 10:07:45: 106000000 INFO @ Fri, 05 Jul 2019 10:07:48: 113000000 INFO @ Fri, 05 Jul 2019 10:07:55: 109000000 INFO @ Fri, 05 Jul 2019 10:07:55: 107000000 INFO @ Fri, 05 Jul 2019 10:07:57: 114000000 INFO @ Fri, 05 Jul 2019 10:08:05: 110000000 INFO @ Fri, 05 Jul 2019 10:08:05: 108000000 INFO @ Fri, 05 Jul 2019 10:08:05: 115000000 INFO @ Fri, 05 Jul 2019 10:08:14: 116000000 INFO @ Fri, 05 Jul 2019 10:08:14: 111000000 INFO @ Fri, 05 Jul 2019 10:08:15: 109000000 INFO @ Fri, 05 Jul 2019 10:08:22: 117000000 INFO @ Fri, 05 Jul 2019 10:08:23: 112000000 INFO @ Fri, 05 Jul 2019 10:08:24: 110000000 INFO @ Fri, 05 Jul 2019 10:08:30: 118000000 INFO @ Fri, 05 Jul 2019 10:08:34: 113000000 INFO @ Fri, 05 Jul 2019 10:08:34: 111000000 INFO @ Fri, 05 Jul 2019 10:08:39: 119000000 INFO @ Fri, 05 Jul 2019 10:08:43: 112000000 INFO @ Fri, 05 Jul 2019 10:08:44: 114000000 INFO @ Fri, 05 Jul 2019 10:08:47: 120000000 INFO @ Fri, 05 Jul 2019 10:08:53: 113000000 INFO @ Fri, 05 Jul 2019 10:08:54: 115000000 INFO @ Fri, 05 Jul 2019 10:08:55: 121000000 INFO @ Fri, 05 Jul 2019 10:09:03: 114000000 INFO @ Fri, 05 Jul 2019 10:09:04: 116000000 INFO @ Fri, 05 Jul 2019 10:09:04: 122000000 INFO @ Fri, 05 Jul 2019 10:09:12: 123000000 INFO @ Fri, 05 Jul 2019 10:09:12: 115000000 INFO @ Fri, 05 Jul 2019 10:09:13: 117000000 INFO @ Fri, 05 Jul 2019 10:09:20: 124000000 INFO @ Fri, 05 Jul 2019 10:09:21: 116000000 INFO @ Fri, 05 Jul 2019 10:09:23: 118000000 INFO @ Fri, 05 Jul 2019 10:09:28: 125000000 INFO @ Fri, 05 Jul 2019 10:09:31: 117000000 INFO @ Fri, 05 Jul 2019 10:09:32: 119000000 INFO @ Fri, 05 Jul 2019 10:09:36: 126000000 INFO @ Fri, 05 Jul 2019 10:09:40: 118000000 INFO @ Fri, 05 Jul 2019 10:09:41: 120000000 INFO @ Fri, 05 Jul 2019 10:09:44: 127000000 INFO @ Fri, 05 Jul 2019 10:09:50: 119000000 INFO @ Fri, 05 Jul 2019 10:09:51: 121000000 INFO @ Fri, 05 Jul 2019 10:09:52: 128000000 INFO @ Fri, 05 Jul 2019 10:09:59: 120000000 INFO @ Fri, 05 Jul 2019 10:10:00: 129000000 INFO @ Fri, 05 Jul 2019 10:10:00: 122000000 INFO @ Fri, 05 Jul 2019 10:10:08: 130000000 INFO @ Fri, 05 Jul 2019 10:10:08: 121000000 INFO @ Fri, 05 Jul 2019 10:10:10: 123000000 INFO @ Fri, 05 Jul 2019 10:10:16: 131000000 INFO @ Fri, 05 Jul 2019 10:10:17: 122000000 INFO @ Fri, 05 Jul 2019 10:10:20: 124000000 INFO @ Fri, 05 Jul 2019 10:10:25: 132000000 INFO @ Fri, 05 Jul 2019 10:10:26: 123000000 INFO @ Fri, 05 Jul 2019 10:10:30: 125000000 INFO @ Fri, 05 Jul 2019 10:10:33: 133000000 INFO @ Fri, 05 Jul 2019 10:10:35: 124000000 INFO @ Fri, 05 Jul 2019 10:10:40: 126000000 INFO @ Fri, 05 Jul 2019 10:10:42: 134000000 INFO @ Fri, 05 Jul 2019 10:10:45: 125000000 INFO @ Fri, 05 Jul 2019 10:10:50: 127000000 INFO @ Fri, 05 Jul 2019 10:10:50: 135000000 INFO @ Fri, 05 Jul 2019 10:10:54: 126000000 INFO @ Fri, 05 Jul 2019 10:10:58: 136000000 INFO @ Fri, 05 Jul 2019 10:10:59: 128000000 INFO @ Fri, 05 Jul 2019 10:11:04: 127000000 INFO @ Fri, 05 Jul 2019 10:11:07: 137000000 INFO @ Fri, 05 Jul 2019 10:11:08: 129000000 INFO @ Fri, 05 Jul 2019 10:11:14: 128000000 INFO @ Fri, 05 Jul 2019 10:11:15: 138000000 INFO @ Fri, 05 Jul 2019 10:11:18: 130000000 INFO @ Fri, 05 Jul 2019 10:11:23: 139000000 INFO @ Fri, 05 Jul 2019 10:11:24: 129000000 INFO @ Fri, 05 Jul 2019 10:11:29: 131000000 INFO @ Fri, 05 Jul 2019 10:11:32: 140000000 INFO @ Fri, 05 Jul 2019 10:11:34: 130000000 INFO @ Fri, 05 Jul 2019 10:11:39: 132000000 INFO @ Fri, 05 Jul 2019 10:11:41: 141000000 INFO @ Fri, 05 Jul 2019 10:11:44: 131000000 INFO @ Fri, 05 Jul 2019 10:11:49: 133000000 INFO @ Fri, 05 Jul 2019 10:11:50: 142000000 INFO @ Fri, 05 Jul 2019 10:11:55: 132000000 INFO @ Fri, 05 Jul 2019 10:11:59: 143000000 INFO @ Fri, 05 Jul 2019 10:12:00: 134000000 INFO @ Fri, 05 Jul 2019 10:12:05: 133000000 INFO @ Fri, 05 Jul 2019 10:12:08: 144000000 INFO @ Fri, 05 Jul 2019 10:12:10: 135000000 INFO @ Fri, 05 Jul 2019 10:12:15: 134000000 INFO @ Fri, 05 Jul 2019 10:12:18: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:12:18: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:12:18: #1 total tags in treatment: 144887287 INFO @ Fri, 05 Jul 2019 10:12:18: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:12:18: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:12:21: 136000000 INFO @ Fri, 05 Jul 2019 10:12:22: #1 tags after filtering in treatment: 144887262 INFO @ Fri, 05 Jul 2019 10:12:22: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:12:22: #1 finished! INFO @ Fri, 05 Jul 2019 10:12:22: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:12:22: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:12:25: 135000000 INFO @ Fri, 05 Jul 2019 10:12:31: 137000000 INFO @ Fri, 05 Jul 2019 10:12:35: 136000000 INFO @ Fri, 05 Jul 2019 10:12:36: #2 number of paired peaks: 6416 INFO @ Fri, 05 Jul 2019 10:12:36: start model_add_line... INFO @ Fri, 05 Jul 2019 10:12:37: start X-correlation... INFO @ Fri, 05 Jul 2019 10:12:38: end of X-cor INFO @ Fri, 05 Jul 2019 10:12:38: #2 finished! INFO @ Fri, 05 Jul 2019 10:12:38: #2 predicted fragment length is 113 bps INFO @ Fri, 05 Jul 2019 10:12:38: #2 alternative fragment length(s) may be 3,113 bps INFO @ Fri, 05 Jul 2019 10:12:38: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.05_model.r INFO @ Fri, 05 Jul 2019 10:12:38: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:12:38: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:12:41: 138000000 INFO @ Fri, 05 Jul 2019 10:12:45: 137000000 INFO @ Fri, 05 Jul 2019 10:12:51: 139000000 INFO @ Fri, 05 Jul 2019 10:12:55: 138000000 INFO @ Fri, 05 Jul 2019 10:13:02: 140000000 INFO @ Fri, 05 Jul 2019 10:13:04: 139000000 INFO @ Fri, 05 Jul 2019 10:13:12: 141000000 INFO @ Fri, 05 Jul 2019 10:13:15: 140000000 INFO @ Fri, 05 Jul 2019 10:13:23: 142000000 INFO @ Fri, 05 Jul 2019 10:13:26: 141000000 INFO @ Fri, 05 Jul 2019 10:13:34: 143000000 INFO @ Fri, 05 Jul 2019 10:13:37: 142000000 INFO @ Fri, 05 Jul 2019 10:13:45: 144000000 INFO @ Fri, 05 Jul 2019 10:13:47: 143000000 INFO @ Fri, 05 Jul 2019 10:13:56: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:13:56: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:13:56: #1 total tags in treatment: 144887287 INFO @ Fri, 05 Jul 2019 10:13:56: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:13:56: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:13:58: 144000000 INFO @ Fri, 05 Jul 2019 10:14:00: #1 tags after filtering in treatment: 144887262 INFO @ Fri, 05 Jul 2019 10:14:00: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:14:00: #1 finished! INFO @ Fri, 05 Jul 2019 10:14:00: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:14:00: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:14:08: #1 tag size is determined as 51 bps INFO @ Fri, 05 Jul 2019 10:14:08: #1 tag size = 51 INFO @ Fri, 05 Jul 2019 10:14:08: #1 total tags in treatment: 144887287 INFO @ Fri, 05 Jul 2019 10:14:08: #1 user defined the maximum tags... INFO @ Fri, 05 Jul 2019 10:14:08: #1 filter out redundant tags at the same location and the same strand by allowing at most 1 tag(s) INFO @ Fri, 05 Jul 2019 10:14:11: #1 tags after filtering in treatment: 144887262 INFO @ Fri, 05 Jul 2019 10:14:11: #1 Redundant rate of treatment: 0.00 INFO @ Fri, 05 Jul 2019 10:14:11: #1 finished! INFO @ Fri, 05 Jul 2019 10:14:11: #2 Build Peak Model... INFO @ Fri, 05 Jul 2019 10:14:11: #2 looking for paired plus/minus strand peaks... INFO @ Fri, 05 Jul 2019 10:14:13: #2 number of paired peaks: 6416 INFO @ Fri, 05 Jul 2019 10:14:13: start model_add_line... INFO @ Fri, 05 Jul 2019 10:14:15: start X-correlation... INFO @ Fri, 05 Jul 2019 10:14:15: end of X-cor INFO @ Fri, 05 Jul 2019 10:14:15: #2 finished! INFO @ Fri, 05 Jul 2019 10:14:15: #2 predicted fragment length is 113 bps INFO @ Fri, 05 Jul 2019 10:14:15: #2 alternative fragment length(s) may be 3,113 bps INFO @ Fri, 05 Jul 2019 10:14:15: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.10_model.r INFO @ Fri, 05 Jul 2019 10:14:16: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:14:16: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:14:25: #2 number of paired peaks: 6416 INFO @ Fri, 05 Jul 2019 10:14:25: start model_add_line... INFO @ Fri, 05 Jul 2019 10:14:27: start X-correlation... INFO @ Fri, 05 Jul 2019 10:14:27: end of X-cor INFO @ Fri, 05 Jul 2019 10:14:27: #2 finished! INFO @ Fri, 05 Jul 2019 10:14:27: #2 predicted fragment length is 113 bps INFO @ Fri, 05 Jul 2019 10:14:27: #2 alternative fragment length(s) may be 3,113 bps INFO @ Fri, 05 Jul 2019 10:14:27: #2.2 Generate R script for model : /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.20_model.r INFO @ Fri, 05 Jul 2019 10:14:27: #3 Call peaks... INFO @ Fri, 05 Jul 2019 10:14:27: #3 Pre-compute pvalue-qvalue table... INFO @ Fri, 05 Jul 2019 10:20:08: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:21:54: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:21:54: #3 Call peaks for each chromosome... INFO @ Fri, 05 Jul 2019 10:24:05: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.05_peaks.xls INFO @ Fri, 05 Jul 2019 10:24:06: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.05_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:24:06: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.05_summits.bed INFO @ Fri, 05 Jul 2019 10:24:06: Done! pass1 - making usageList (128 chroms): 6 millis pass2 - checking and writing primary data (15904 records, 4 fields): 30 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 10:25:43: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.20_peaks.xls INFO @ Fri, 05 Jul 2019 10:25:43: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.20_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:25:43: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.20_summits.bed INFO @ Fri, 05 Jul 2019 10:25:43: Done! pass1 - making usageList (39 chroms): 1 millis pass2 - checking and writing primary data (685 records, 4 fields): 8 millis CompletedMACS2peakCalling INFO @ Fri, 05 Jul 2019 10:25:47: #4 Write output xls file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.10_peaks.xls INFO @ Fri, 05 Jul 2019 10:25:47: #4 Write peak in narrowPeak format file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.10_peaks.narrowPeak INFO @ Fri, 05 Jul 2019 10:25:47: #4 Write summits bed file... /home/okishinya/chipatlas/results/rn6/ERX101884/ERX101884.10_summits.bed INFO @ Fri, 05 Jul 2019 10:25:47: Done! pass1 - making usageList (66 chroms): 2 millis pass2 - checking and writing primary data (3220 records, 4 fields): 86 millis CompletedMACS2peakCalling BedGraph に変換しました。 BigWig に変換中... BigWig に変換しました。