SRA SRX MGI old new judge 185 1587 http://www.ncbi.nlm.nih.gov/sra?term=SRX879186 NoAb NoD@ NA 39 300 http://www.ncbi.nlm.nih.gov/sra?term=SRX884059 DNase-seq DNS@ DNase-Seq 17 233 http://www.ncbi.nlm.nih.gov/sra?term=ERX662614 N/A InP@ Input control 59 59 http://www.ncbi.nlm.nih.gov/sra?term=ERX646167 Chromotek GFP trap Agarose Oth@ GFP 40 40 http://www.ncbi.nlm.nih.gov/sra?term=SRX352257 H3K4me2 (Millipore 07-030)|Primary thioglycollate-elicited peritoneal macrophages His@ H3K4me2 38 38 http://www.ncbi.nlm.nih.gov/sra?term=SRX273257 Streptavidin beads|murine primary activated B cells Oth@ Biotin 36 36 http://www.ncbi.nlm.nih.gov/sra?term=SRX746999 peritoneal thioglycolate-elicited macrophages Unc@ Unclassified 34 34 http://www.ncbi.nlm.nih.gov/sra?term=SRX810643 None (input)|Immortalized MEF InP@ Input control 31 31 http://www.ncbi.nlm.nih.gov/sra?term=SRX760033 embryonic stem cells Unc@ Unclassified 30 30 http://www.ncbi.nlm.nih.gov/sra?term=SRX747056 large peritoneal macrophages Unc@ Unclassified 30 30 http://www.ncbi.nlm.nih.gov/sra?term=SRX205967 RPA|in vitro activated B cells Oth@ Rpa1 7 24 http://www.ncbi.nlm.nih.gov/sra?term=SRX256951 none InP@ Input control 24 24 http://www.ncbi.nlm.nih.gov/sra?term=SRX366563 HA|NIH/3T3 Tet-On 3G cells Oth@ Epitope tags 23 23 http://www.ncbi.nlm.nih.gov/sra?term=SRX805983 STAT1 (santa cruz, sc-592)|Primary bone marrow-derived macrophages (BMDM) Oth@ Stat1 21 21 http://www.ncbi.nlm.nih.gov/sra?term=SRX739775 C2C12 myoblasts Unc@ Unclassified 1 21 http://www.ncbi.nlm.nih.gov/sra?term=SRX914984 CorticalNeurons|CorticalNeurons Unc@ Unclassified 1 21 http://www.ncbi.nlm.nih.gov/sra?term=SRX122544 Stat1|sc-346|A302-753A|bone marrow Oth@ Stat1 1 21 http://www.ncbi.nlm.nih.gov/sra?term=SRX021896 H3K9me2|MEF His@ H3K9me2 20 20 http://www.ncbi.nlm.nih.gov/sra?term=SRX810441 none|Embryonic stem cells InP@ Input control 20 20 http://www.ncbi.nlm.nih.gov/sra?term=SRX183960 anti-p300|primary CD4+ T cells from spleen and lymph nodes Oth@ Ep300 20 20 http://www.ncbi.nlm.nih.gov/sra?term=SRX1133087 KH2 mouse embryonic stem cells Unc@ Unclassified 19 19 http://www.ncbi.nlm.nih.gov/sra?term=SRX319926 H3K4me1 (Abcam ab8895)|Primary thioglycollate-elicited peritoneal macrophages His@ H3K4me1 19 19 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057073 H3.3|Primary Cortical Neurons (E16.5 DIV8) His@ H3.3 4 17 http://www.ncbi.nlm.nih.gov/sra?term=SRX711579 Liver Unc@ Unclassified 1 17 http://www.ncbi.nlm.nih.gov/sra?term=ERX040281 h3k4me3 His@ H3k4me3 16 16 http://www.ncbi.nlm.nih.gov/sra?term=SRX810647 H3K4me3 (Millipore, catalog# 17-614, lot# 1974075)|Immortalized MEF His@ H3K4me2 16 16 http://www.ncbi.nlm.nih.gov/sra?term=SRX810645 H3K4me1 (Active Motif, catalog# 39297, lot# 21008001)|Immortalized MEF His@ H3K4me1 16 16 http://www.ncbi.nlm.nih.gov/sra?term=SRX700335 anti-MEF2D (Flavell et al., 2008)|retina Oth@ Mef2d 16 16 http://www.ncbi.nlm.nih.gov/sra?term=SRX122455 PU1|sc-352|bone marrow Oth@ Spi1 15 15 http://www.ncbi.nlm.nih.gov/sra?term=SRX348404 Anti-PU.1 (in-house rabbit polyclonal against the N-Terminal (aa. 1-100))|Primary bone marrow-derived macrophages (BMDM) Oth@ Spi1 15 15 http://www.ncbi.nlm.nih.gov/sra?term=SRX319943 H4K8ac (Millipore 07-328)|Primary thioglycollate-elicited peritoneal macrophages His@ H4K8ac 15 15 http://www.ncbi.nlm.nih.gov/sra?term=SRX188832 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|MEL InP@ Input control 4 14 http://www.ncbi.nlm.nih.gov/sra?term=SRX225201 IgG InP@ Input control 14 14 http://www.ncbi.nlm.nih.gov/sra?term=SRX471275 Ab3261 Abcam|Leukemic bone marrow His@ H3K79me1 14 14 http://www.ncbi.nlm.nih.gov/sra?term=SRX352265 p65 (Santa Cruz sc-372)|Primary thioglycollate-elicited peritoneal macrophages Oth@ Rela 13 13 http://www.ncbi.nlm.nih.gov/sra?term=SRX112540 DMC1 (C-20)|sc 8973|adult testis Oth@ Dmc1 13 13 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057071 Primary Cortical Neurons (E16.5 DIV8) Unc@ Unclassified 13 13 http://www.ncbi.nlm.nih.gov/sra?term=SRX015594 STAT3|murine CD4+ T Oth@ Stat3 1 13 http://www.ncbi.nlm.nih.gov/sra?term=SRX746988 Microglia Unc@ Unclassified 1 13 http://www.ncbi.nlm.nih.gov/sra?term=SRX079874 G1E-ER4+E2 cells Unc@ Unclassified 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX950641 None (Input)|Liver tissue InP@ Input control 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX810626 H3K27ac (Active Motif, catalog# 39133, lot# 21311004)|Immortalized MEF His@ H3K27ac 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX689486 H3K4me3 (Millipore/EMD, 07-473, lot 2155413)|spermatocytes His@ H3K4me3 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX671681 N/A|DIV7 mCTX neurons InP@ Input control 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX661422 GR, PA1-511A, Pierce; sc-1004, Santa Cruz|Liver tissue Oth@ Nr3c1 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX652861 embryonic cells Unc@ Unclassified 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX554635 anti-Suz12 (D39F6 XP Cell Signaling)|Embryonic Stem Cells Oth@ Suz12 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX498845 H3K27Ac (Abcam, ab4729)|Primary bone marrow-derived macrophages (BMDM) His@ H3K27ac 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX366562 NA|NIH/3T3 Tet-On 3G cells InP@ Input control 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX208218 CD43 negative mouse resting B cells Unc@ Unclassified 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX187243 IRF4|Th17 in vitro Oth@ Irf4 12 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX143622 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|C2C12 InP@ Input control 1 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX689487 spermatocytes Unc@ Unclassified 1 12 http://www.ncbi.nlm.nih.gov/sra?term=SRX038432 BMAL1|Liver cells Oth@ Arntl 11 11 http://www.ncbi.nlm.nih.gov/sra?term=SRX757088 Excitatory pyramidal neurons from mouse neocortex Unc@ Unclassified 11 11 http://www.ncbi.nlm.nih.gov/sra?term=SRX507975 sorted murine lin-/Sca-1/c-Kit in vitro cultured cells Unc@ Unclassified 11 11 http://www.ncbi.nlm.nih.gov/sra?term=SRX254821 none|Differentiated embryonic stem cells InP@ Input control 11 11 http://www.ncbi.nlm.nih.gov/sra?term=SRX150872 Anti-H3K4me3 (Active Motif #39159)|Primary bone marrow-derived macrophages (BMDM) His@ H3K4me3 11 11 http://www.ncbi.nlm.nih.gov/sra?term=SRX122509 Cebpb|sc-150|bone marrow Oth@ Cebpb 11 11 http://www.ncbi.nlm.nih.gov/sra?term=SRX094459 STAT5 antibody C-17|liver tissue Oth@ Stat5a 11 11 http://www.ncbi.nlm.nih.gov/sra?term=SRX021818 HPC-7 Cell Line Unc@ Unclassified 11 11 http://www.ncbi.nlm.nih.gov/sra?term=ERX132655 Anti H3K4me3 Millipore 07-473 His@ H3K4me3 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX769451 native|no antibody|Embryonic stem cells InP@ Input control 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX703685 none (input)|ES cells InP@ Input control 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX647908 crosslink|no antibody|Embryonic stem cells InP@ Input control 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX471276 Ab3594 Abcam|Leukemic bone marrow His@ H3K79me2 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX385364 H3K4me3|Embryonic Stem Cells (ESCs) His@ H3K4me3 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX305006 none|mouse embryonic stem cells InP@ Input control 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX257622 CREB|CREB-1 Antibody (Santa Cruz Biotech, catalog# sc-186) Oth@ Creb1 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX187257 p300|Th17 in vitro Oth@ Ep300 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX122543 Nfkb1|sc-114|bone marrow Oth@ Rela 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX122533 Irf4|sc-6059|bone marrow Oth@ Irf4 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX122523 Irf2|ab65048|sc-498|bone marrow Oth@ Irf2 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX1022124 crosslink|anti-H3.3 (09-838)|Embryonic stem cells His@ H3.3 10 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX1006938 Embryonic stem cells Unc@ Unclassified 1 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX203357 Neuralized embryoid bodies Unc@ Unclassified 1 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX122483 Atf3|sc-188|ab70005-100|bone marrow Oth@ Atf3 1 10 http://www.ncbi.nlm.nih.gov/sra?term=SRX029287 H3K9me2|DC His@ H3K9me2 1 10 http://www.ncbi.nlm.nih.gov/sra?term=ERX200401 H3K27-3me His@ H3K273me 1 10 http://www.ncbi.nlm.nih.gov/sra?term=ERX200400 H3k4-3me His@ H3K4me3 1 10 http://www.ncbi.nlm.nih.gov/sra?term=ERX200399 Bcl11a Oth@ Bcl11a 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX703693 H3K4me1 (Abcam, Ab8895, lot 720417)|ES cells His@ H3K4me1 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX701170 None (Input DNA)|Splenic InP@ Input control 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX701162 RAD21 (Abcam, ab992)|Splenic Oth@ Rad21 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX699292 none|Mouse back skins InP@ Input control 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX647887 native|anti-H3K9me3 (ab8898)|Embryonic stem cells His@ H3K9me3 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX535261 embryonic stem cells, mock treatment Unc@ Unclassified 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX520211 MED1 (M-255)|3T3-L1 pre-adipocytes (4h) Oth@ Med1 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX470065 anti-HA|embryonic stem cells Oth@ Epitope tags 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX377678 H3K27ac (Abcam 4729)|forebrain His@ H3K27ac 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX319889 PU.1 (Santa Cruz sc-352)|Primary thioglycollate-elicited peritoneal macrophages Oth@ Spi1 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX247751 3FLAG|M2 (Sigma Aldrich)|3T3-L1 cells (ATCC #CL-173) Oth@ Epitope tags 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX148805 Dynabeads M-280 Streptavidin (Invitrogen)|Mature B Oth@ Biotin 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX122573 Stat2|ab53149|sc-839|bone marrow Oth@ Stat2 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX107336 H3K4me3|primary CD4+ T cells from spleen and lymph nodes His@ H3K4me3 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX023723 H3K4me3|mouse B cells His@ H3K4me3 9 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX017069 RNA Pol II (Rpb1 N-terminus)|V6.5 mES cells Pol@ RNA Polymerase II 1 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX377663 none|forebrain InP@ Input control 1 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX265310 DNase DNS@ DNase-Seq 1 9 http://www.ncbi.nlm.nih.gov/sra?term=SRX213837 n/a|n/a InP@ Input control 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX869084 Ctcf (Millipore, 07-729, lot 2452497)|Neural stem cells Oth@ Ctcf 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX695722 no antibody|ES cell culture InP@ Input control 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX671682 sc48|DIV7 mCTX neurons Oth@ Fosb 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX671680 sc52|DIV7 mCTX neurons Oth@ Fos 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX668182 sc-13050|liver tissue Oth@ Onecut1 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX648117 H2A.X (Xiao lab)|reprogramming from MEF cell His@ H2A.X 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX647912 native|anti-HA (12CA5)|Embryonic stem cells Oth@ Epitope tags 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX471279 Ab2621 Abcam|Leukemic bone marrow His@ H3K79me3 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX396246 H3K4me3 (Abcam, Catalog# ab8580, Lot# GR47272-1)|Embryonic stem cells His@ H3K4me3 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX392735 C/EBPa (sc-61, Santa Cruz)|Haftl pre-B cells Oth@ Cebpa 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX377694 H3K27ac (Abcam 4729)|heart His@ H3K27ac 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX373782 JARID2|Embryonic stem cells Oth@ Jarid2 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX360387 none|ES cell culture InP@ Input control 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX335056 anti-HA (12CA5)|Embryonic stem cells Oth@ Epitope tags 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX268270 cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz|7438 cells + Afos Oth@ Esr1 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX268262 cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz|7438 cells + Afos Oth@ Nr3c1 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX265329 cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz Oth@ Nr3c1 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX197277 anti-H3K4me1|Primary bone marrow-derived macrophages, no treatment, H3K4me1 ChIP His@ H3K4me1 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX181741 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|G1E-ER4 InP@ Input control 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX122417 Junb|ab28838|sc-46|bone marrow Oth@ Junb 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX120232 NA|Mature B InP@ Input control 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX118385 Anti-DMC1 (C-20)|Anti-DMC1 9R_testis_SSDS Oth@ Dmc1 8 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX015581 IRF4|murine CD4+ T Oth@ Irf4 3 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX003858 H3K4me3 His@ H3K4me3 2 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX143295 None|Liver tissue InP@ Input control 1 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX997769 HDAC3|liver Oth@ Hdac3 1 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX381465 H3K4me3|07-473|spermatocytes His@ H3K4me3 1 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX377681 none|heart InP@ Input control 1 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX373582 none (input)|Heart InP@ Input control 1 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX213394 none|mammary gland InP@ Input control 1 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX122456 Pol-II|MMS-128P|bone marrow Pol@ RNA Polymerase II 1 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX120217 NA|Pro-B InP@ Input control 1 8 http://www.ncbi.nlm.nih.gov/sra?term=SRX020995 anti-H3|Macrophages His@ H3 1 8 http://www.ncbi.nlm.nih.gov/sra?term=ERX631804 DNMT1 Oth@ Dnmt1 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX814805 Mouse neuroblastoma cell line Unc@ Unclassified 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX703692 H3K27ac (Active, Motif, lot 39133)|ES cells His@ H3K27ac 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX698895 Nucleus accumbens tissue Unc@ Unclassified 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX651988 None|mouse embryonic stem cells InP@ Input control 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX540714 FLAG (Sigma, F1804)|Dnmt TKO ESCs Oth@ Epitope tags 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX523470 None|SV40T transformed fibroblasts InP@ Input control 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX495628 Anti-RORgamma(t), eBioscience, AFKJS-9, 14-6988, E11084-325|Th17 cells Oth@ Rorc 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX385368 H3K27me3|Embryonic Stem Cells (ESCs) His@ H3K27me3 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX377708 H3K27ac (Abcam 4729)|liver His@ H3K27ac 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX373043 anti-POLR3D (mouse and human) CS681 Ab, raised against peptide CSPDFESLLDHKHR {Chong et al 2001}|Mouse Liver Pol@ Polr3d 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX353828 H3K4me1 (Abcam, catalog# ab8895, lot# GR46388-1)|Primary B-cells His@ H3K4me1 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX353826 H3K4me3 (Active Motif, catalog# 39159, lot# 1609004)|Primary B-cells His@ H3K4me3 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX353785 c-Myc N262 (Santa Cruz, catalog# sc764, lot#G0111)|Primary B-cells Oth@ Myc 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX326482 (rb) -H3K4me3 (#528; Ali Shilatifard)|ES cell culture His@ H3K4me3 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX268239 cocktail of PA-510A and PA-511A from Affinity BioReagents and sc-1004 from Santa Cruz|7438 cells Oth@ Nr3c1 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX244262 H3K4me3|liver tissue His@ H3K4me3 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX244255 H3K4me1|liver tissue His@ H3K4me1 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX214084 Pou5f1/Oct4|V5|KH2 ES cells Oth@ Pou5f1 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX213415 Histone H3 trimethyl Lys4|mammary gland His@ H3K4me3 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX187271 STAT3|Th17 in vitro Oth@ Stat3 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX186072 none, input-DNA|Embryonic stem cell InP@ Input control 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX181749 GATA1_(SC-265)|sc-265|GATA1 is erythroid-specific and is responsible for the regulated transcription of erythroid genes.|rat monoclonal antibody raised against mouse recombinant GATA1; recommended for detection of GATA1 of mouse, rat and human origin. Antibody Target: GATA1|G1E-ER4 Oth@ Gata1 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX119671 H3K36me3|ab9050|H3K36me3 IP His@ H3K36me3 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX119664 H3K4me3|ab8580|H3K4me3 IP His@ H3K4me3 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX094466 Bcl6 antibody N-3|liver tissue Oth@ Bcl6 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX022483 none|HL-1 cells InP@ Input control 7 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX006976 H3K27me3 from T. Jenuwein His@ H3K27me3 2 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX003805 H3K27me3 His@ H3K27me3 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX657138 None|None|iPSC InP@ Input control 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX657137 Med1/TRAP220|Bethyl A300-793A|iPSC Oth@ Med1 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX597182 WCE|3T3L1 InP@ Input control 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX597181 H4K20me1|3T3L1 His@ H4K20me1 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX597180 H3K9me3|3T3L1 His@ H3K9me3 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX597179 H3K79me2|3T3L1 His@ H3K79me2 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX597178 H3K4me3|3T3L1 His@ H3K4me3 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX597174 H3K27ac|3T3L1 His@ H3K27ac 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX377697 none|liver InP@ Input control 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX340953 Gata2|FDCPmix Oth@ Gata2 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX119672 none|none|input InP@ Input control 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX119651 RPB2|sc-67318|RPB2 IP Pol@ Polr2b 1 7 http://www.ncbi.nlm.nih.gov/sra?term=SRX1046534 RAG1|thymocytes Oth@ Rag1 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX865038 none, input|mouse primary CD4+ T cells InP@ Input control 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX865037 STAT1 (Santa Cruz Biotechnology, sc-592)(Lot #E1209)|mouse primary CD4+ T cells Oth@ Stat1 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX865031 STAT3 (eBioscience, #14-6727-81)(Lot #E034014)|mouse primary CD4+ T cells Oth@ Stat3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX863174 H3K27ac (Abcam, catalog# ab4729, lot# GR183919-1)|Mouse Embryonic day 14.5 Fetal Liver His@ H3K27ac 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX863168 H3K4me3 (Millipore, catalog# 07-473, lot# 2289139)|Mouse Embryonic day 14.5 Fetal Liver His@ H3K4me2 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX804264 Atrx|Santa Cruz (sc-15408)|Primary culutured mouse cortical neurons (DIV 8) Oth@ Atrx 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX764844 H3K9me3 (Active Motif #39161)|TT2 His@ H3K9me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX746987 small peritoneal macrophages Unc@ Unclassified 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX680474 H3K27ac|abcam:ab4729, lot3221746|Heart His@ H3K27ac 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX652742 hematopoietic stem and progenitor cells from E14.5 foetal liver Unc@ Unclassified 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX646168 Rabbit polyclonal anti-mouse NLRC5 (aa 1139) custom antibody generated by Adipogen|WT T-cells Oth@ Nlrc5 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX554619 anti-H3K27me3 (C36B11 Cell Signaling)|Embryonic Stem Cells His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX542625 HA antibody, Abcam ab9110|Embryonic Stem Cells Oth@ Epitope tags 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX499144 none|embryonic stem cells (ESC) InP@ Input control 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX498827 PU.1 (in-house rabbit polyclonal anti-mouse PU.1 1-100aa)|Primary bone marrow-derived macrophages (BMDM) Oth@ Spi1 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX498821 IRF8 (in-house rabbit polyclonal anti-mouse IRF8 146-162aa)|Primary bone marrow-derived macrophages (BMDM) Oth@ Irf8 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX481642 H3K27me3 IP (abcam 6002)|embryoid bodies His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX481636 H3K27me3 IP (abcam 6002)|embryonic stem cells His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX471278 07-449 Millipore|Leukemic bone marrow His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX373609 none (streptavidin-coated beads used to pulldown biotinylated Gata4; 11205D, M-280 Streptavidin Invitrogen)|Heart InP@ Input control 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX341756 rabbit anti-H3K9ac (Millipore; 06-942)|intestinal epithelial cells His@ H3K9ac 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX320034 RNA Pol II (Rpb1 N-terminus)|SC-899|mouse heart Pol@ RNA Polymerase II 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX318110 none|none|Input, liver cells InP@ Input control 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX299545 H3K36me3|Abcam ab9050|Hematopoietic stem cells (HSC) His@ H3K36me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX299539 H3K27me3|Millipore 07-449|Hematopoietic stem cells (HSC) His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX275824 Mouse embryonic day 11.5 (e11.5) hindbrain Unc@ Unclassified 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX275812 anti-FLAG M2 (Sigma, F1804)|Neurospheres Oth@ Epitope tags 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX265325 C/EBPbeta sc-150, santa cruz Oth@ Cebpb 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX254817 anti-H3K27me3(Millipore 17-622)|Differentiated embryonic stem cells His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX244268 H3K27ac|liver tissue His@ H3K27ac 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX244244 H3K27me3|liver tissue His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX214075 none|V5|KH2 ES cells InP@ Input control 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX209218 RNA Pol II|Abcam Cat#ab5408|NAc dissection from 3-5 animals Pol@ RNA Polymerase II 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX209211 H3K9me2|Abcam Cat#ab1220|NAc dissection from 3-5 animals His@ H3K9me2 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX209205 H3K4me1|Abcam Cat#ab1012|NAc dissection from 3-5 animals His@ H3K4me1 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX209199 H3K36me3|Abcam Cat#ab9050|NAc dissection from 3-5 animals His@ H3K36me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX209193 H3K27me3|Abcam Cat#ab6002|NAc dissection from 3-5 animals His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX205959 gammaH2AX|in vitro activated B cells His@ H2A.XS139ph 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX195364 rabbit anti-Smc3|mouse embryonic fibroblasts Oth@ Smc3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX194543 p300 ChIP-Seq, sc-585 (Santa Cruz) Oth@ Ep300 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX187231 IRF4|Th0 in vitro Oth@ Irf4 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX185839 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|CH12 InP@ Input control 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX183945 anti-K4me1|primary CD4+ T cells from spleen and lymph nodes His@ H3K4me1 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX149180 none, input-DNA|FACS-purified Pou5f1-GFP-positive germ cells InP@ Input control 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX122427 K4me1|ab9051|bone marrow Unc@ Unclassified 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX118192 RNA Polymerase II|C57BL/6 LXRdKO mouse liver Pol@ RNA Polymerase II 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX118186 RNA Polymerase II|C57BL/6 wild type mouse liver Pol@ RNA Polymerase II 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX109340 none|bone marrow macrophages InP@ Input control 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX109339 anti-STAT1 (santa cruz: sc-417)|bone marrow macrophages Oth@ Stat1 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060574 Mouse anti-H3K9me2 (Abcam: ab1220)|genomic DNA, Mnase His@ H3K9me2 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060571 Rabbit anti-H3K4me2 (Millipore: 07-030)|genomic DNA, Mnase His@ H3K4me2 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057072 H3.1/2|Primary Cortical Neurons (E16.5 DIV8) His@ H3.1 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057063 H3.3|Adult Hippocampal NeuN- Cells (~7 weeks postnatal) His@ H3.3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057051 M280 streptavidin Dynabeads|Primary Cortical Neurons (E16.5 DIV8) Oth@ Biotin 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX1037022 anti-VDR (Santa Cruz Biotechnology; sc-1008)|proxmial half site of small intestine Oth@ Vdr 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX100616 H3K27me3|primary CD4+ T cells from spleen and lymph nodes His@ H3K27me3 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX093543 polyclonal anti-RXRa|embryonal carcinoma cells Oth@ Rxra 6 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX032886 FOXA2|Homogenized Mouse Liver Oth@ Foxa2 6 6 http://www.ncbi.nlm.nih.gov/sra?term=ERX132721 Anti H3 Acetyl K9, K14 (Millipore 06-499) His@ H3K9K14ac 6 6 http://www.ncbi.nlm.nih.gov/sra?term=ERX132715 to be provided Unc@ Unclassified 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX997760 Rev-erbalpha|liver Oth@ Thra 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX597177 H3K4me1|3T3L1 His@ H3K4me1 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX597176 H3K36me3|3T3L1 His@ H3K36me3 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX597175 H3K27me3|3T3L1 His@ H3K27me3 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX381174 liver Unc@ Unclassified 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX340954 Gata1|FDCPmix Oth@ Gata1 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX205960 RPA|thymocyte Oth@ Rpa1 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX1046541 RAG2|thymocytes Oth@ Rag2 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX100820 anti-gammaH2AX|mIMCD3 His@ H2A.XS139ph 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX003141 RNAPII Pol@ RNA Polymerase II 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX003138 RXR Oth@ Rxra 1 6 http://www.ncbi.nlm.nih.gov/sra?term=SRX003137 PPARg Oth@ Pparg 1 6 http://www.ncbi.nlm.nih.gov/sra?term=ERX631807 TET3 Oth@ Tet3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX886485 none|MLL-AF9/NrasG12D murine cell line InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX810526 H3K27Ac|Abcam AB4729|Embryonic stem cells His@ H3K27ac 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX810524 Input|Embryonic stem cells InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX810522 RNA Pol II|Abcam AB817|Embryonic stem cells Pol@ RNA Polymerase II 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX768374 no antibody (input DNA sequencing)|Embryonic stem cells InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX768369 anti-HA (Roche, Basel,Switzerland)|Embryonic stem cells Oth@ Epitope tags 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX759273 Anti- H4K20me1 Abcam (Cat. No. ab9051)|mouse primary cortical neuron His@ H4K20me1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX751766 H3K4me3|pancreatic islets His@ H3K4me2 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX751765 none (input)|pancreatic islets InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX746975 bone marrow derived macrophages Unc@ Unclassified 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX700950 Control|none (input)|CD4+CD8+ double positive thymocytes InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX692082 anti-H3K9me2 (Abcam; ab1220; Lot: GR138716-1)|Murine MLL-AF9 leukemic cells His@ H3K9me2 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX692081 anti-H3K9ac (Abcam; ab4441; Lot: GR171767-1)|Murine MLL-AF9 leukemic cells His@ H3K9ac 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX647902 crosslink|anti-H3 (ab1791)|Embryonic stem cells His@ H3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX604265 none|Neural progenitor cells InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX554587 Embryonic Stem Cells Unc@ Unclassified 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX504222 ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells Unc@ Unclassified 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX484256 Foxp3 antibody is a custom polyclonal antibody that has been affinity purified|Activated Treg Oth@ Foxp3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX396321 H3K27me3 (Millipore 07-449)|ES cells His@ H3K27me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX392760 abnova 1879-mol clone 1c12|Haftl pre-B cells Oth@ Ebf1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX392745 PU.1 (sc-352, Santa Cruz)|Haftl pre-B cells Oth@ Spi1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX392740 C/EBPb (sc-150, Santa Cruz)|Haftl pre-B cells Oth@ Cebpb 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX389625 H3K27Ac (ab4729, Abcam)|Haftl pre-B cells His@ H3K27ac 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX389620 H3K27Me3 (17-622, Millipore)|Haftl pre-B cells His@ H3K27me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX389615 H3K4Me1 (037-050, Diagenode)|Haftl pre-B cells His@ H3K4me1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX388408 NULL|shLuc ES cells InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX364622 Nave CD4+ T cells Unc@ Unclassified 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX353805 H3K27ac (Abcam, catalog# ab4729, lot# GR45851-1)|Primary B-cells His@ H3K27ac 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX353790 RNAPII (Santa Cruz, catalog# sc-899, lot# F0112)|Primary B-cells Pol@ RNA Polymerase II 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX352267 Primary thioglycollate-elicited peritoneal macrophages Unc@ Unclassified 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX338036 Runx3 poly clonal home made|Splenic CD8+ T cells Oth@ Runx3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX317692 H3K36me3 (Abcam, Ab9050, lot 707946)|ES cells His@ H3K36me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX317688 H3K4me3 (Active, Motif, lot 39159)|ES cells His@ H3K4me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX298239 input|Rag1 -/- pro-B cells InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX254870 input DNA InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX217129 Smc5|Calbiochem, DR1030|Splenic B Cells Oth@ Smc5 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX217127 Brca1|mouse monoclonal raised against mouse BRCA1 (160-300 amino acids)|Splenic B Cells Oth@ Brca1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX217125 RPA|Calbiochem, RPA34-20|Splenic B Cells Oth@ Rpa2 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX216303 AcH2B (in-house made rabbit whole antiserum) His@ H2Bac 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX213419 Histone H3 trimethyl Lys27|mammary gland His@ H3K27me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX206368 None|ZHBTc4 ES cells InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX206144 Anti-Trimethyl Histone H3 (Lys4) Antibody, (Millipore, clone: CMA304, catalog#: 05-1339, lot#: 2024897)|Sorted cells His@ H3K4me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX206143 Anti-trimethyl Histone H3 (Lys27) Antibody (Millipore, catalog#: ABE44, lot#: 1966928)|Sorted cells His@ H3K27me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX204805 Flag-M2 (Sigma, F1804)|mouse embryonic stem cells Oth@ Epitope tags 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX204636 H2A.X|iPS cell from B cell His@ H2A.X 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX204596 anti-RPA32 Calbiochem NA19L, lot#D00127062|Primary B cells Oth@ Rpa2 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX197281 anti-PU.1 (rabbit polyclonal against the N-terminus (aa. 1-100))|Primary bone marrow-derived macrophages, no treatment, PU.1 ChIP Oth@ Spi1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX197265 anti-H3K27ac|Primary bone marrow-derived macrophages, no treatment, H3K27ac ChIP His@ H3K27ac 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX172341 IRF4 (Santa Cruz, sc-6059, k1209)|CD4+ T Cells Oth@ Irf4 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX151678 H3K4me2 (07-449, Upstate, Charlottesville, VA, lot 26335, cat#07-030)|retina His@ H3K4me2 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX148835 H3K9ac Ab (Upstate 07-352, LOT# DAM1394804)|Mature B His@ H3K9ac 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX148830 H3K4me3 Ab (Abcam ab8580-100)|Mature B His@ H3K4me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX148823 H3K27me3 Ab (gift from T.Jenuwein)|Pro-B His@ H3K27me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX147770 Ring1B (custom-made)|embryonic stem cells Oth@ Rnf2 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX118005 polyclonal rabbit a-GATA-1 produced in-house (H Im et al. PNAS 2005)|ES-cell derived erythroid progenitors Oth@ Gata1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX1114519 Primary B cells Unc@ Unclassified 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX109320 Ikaros-N terminal Ab (IkN)|Whole Thymus Oth@ Ikzf1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX1078985 EZH1 (a generous gift from Dr. Sartorelli)|Mammary gland Oth@ Ezh1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX104383 CAPH2|Bethyl A302-275A|Embryonic stem cells Oth@ Ncaph2 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX1029569 Jejunal epithelial cells Unc@ Unclassified 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX087279 polyclonal anti-RNA-PolII (H-224)|embryonal carcinoma cells Pol@ RNA Polymerase II 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX087274 polyclonal anti-RARg|embryonal carcinoma cells Oth@ Rarg 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX021616 ER Ab-10|Conditional Myb transformed myeloid cell line Oth@ Esr1 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX015609 STAT3|murine Irf4 deficient CD4+ T Oth@ Stat3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX015599 IgG|murine CD4+ T InP@ Input control 5 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX014429 H3K9me3 (Ab8898)|V6.5 mES cells His@ H3K9me3 5 5 http://www.ncbi.nlm.nih.gov/sra?term=ERX200442 no antibody InP@ Input control 2 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX212164 H3K79me2 His@ H3K79me2 1 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX915003 hippocampal tissue|hippocampus Unc@ Unclassified 1 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX751755 H3K27me3|pancreatic islets His@ H3K27me3 1 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX527835 pancreas Unc@ Unclassified 1 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX202987 None (Total Input) InP@ Input control 1 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX105503 Foxa1|liver Oth@ Foxa1 1 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX100289 HDAC3|Liver Oth@ Hdac3 1 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX022857 Sin3B|C2C12 myotubes Oth@ Sin3b 1 5 http://www.ncbi.nlm.nih.gov/sra?term=SRX020249 RNAP-II|ab5408|Adult_Tissue Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX994938 H3K4me3|T cells His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX984575 none|AB1 ES cells InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX976732 Bethyl 300-080A|immortalized fibroblast Oth@ Rad21 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX976728 Millipore 07-729|immortalized fibroblast Oth@ Ctcf 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX957692 none|e12.5 embryonic forebrain, input InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX894102 anti-Nbs1 (Abcam, ab32074)|splenic B cells Oth@ Nbn 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX884080 H4K8ac (ab15823; Abcam)|MLL-AF9/NrasG12D murine cell line His@ H4K8ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX884076 H3K27ac (ab4729; Abcam)|MLL-AF9/NrasG12D murine cell line His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX884072 Brd4 (A301-985A; Bethyl)|MLL-AF9/NrasG12D murine cell line Oth@ Brd4 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX873352 H3K56ac (abcam, ab76307)|Embryonic stem cells (ESCs) His@ H3K56ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX873351 H3K9ac (Millipore, 07-352)|Embryonic stem cells (ESCs) His@ H3K9ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX869076 H3K27me3 (Mllipore, 07-449, lot 2194165)|Neural stem cells His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX869075 H3K4me3 (Millipore, 07-473, lot JBC1863338)|Neural stem cells His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX869074 Smchd1 (Abcam, ab31865, lot GR52946-1)|Neural stem cells Oth@ Smchd1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX868560 Day10 Neurons Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX818831 Anti-Sirt1 (Upstate, 07-131)|Satellite cells Oth@ Sirt1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX810639 H3K27ac (Active Motif, catalog# 39133, lot# 01613007)|Immortalized MEF His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX800824 anti-BRG1 (Abcam, catalog# 110641, lot#YG081901C)|Differentiated embryonic stem cells Oth@ Smarca4 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX759296 Anti- Pol II Santa Cruz Biotechnology (Cat. No. sc-899X)|mouse primary cortical neuron Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX759291 Anti- LSD1 Abcam (Cat. No. ab17721)|mouse primary cortical neuron Oth@ Kdm1a 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX759287 Anti- M2 Sigma (Cat. No. A2220)|mouse primary cortical neuron Oth@ Epitope tags 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX759262 Anti-H3K4me1 Abcam (Cat. No. ab8895)|mouse primary cortical neuron His@ H3K4me1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX759258 Anti- H3K36me3 Millipore (Cat. No. 07-549 )|mouse primary cortical neuron His@ H3K36me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX759252 Millipore 07-473|Hematopoietic stem cells (HSC) His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX759250 Millipore 07-449|Hematopoietic stem cells (HSC) His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX758045 STAT3 (Invitrogen, 13-7000)|Pre-activated CD4+ T cells Oth@ Stat3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX757574 Scl/Tal1|ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells Oth@ Tal1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX751012 pCREB (Millipore, Ser 133, 06-519)|MC3T3-E1 (pre-osteoblast) Oth@ Creb1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX708736 Neural progenitor cells Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX700949 H3K27Ac|Anti-acetyl lysine 27 of histone H3 (Active Motif, catalog number 39133)|CD4+CD8+ double positive thymocytes His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX695720 Pol II (Santa Cruz, N20)|ES cell culture Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX695712 H3K4me1 (Homemade #24)|ES cell culture His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX695708 H3K27ac (Abcam, ab4729)|ES cell culture His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX695703 H3K27me3 (Homemade #67)|ES cell culture His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX692077 anti-H3K79me2 (Abcam; ab3594; Lot: GR46675-1)|Murine MLL-AF9 leukemic cells His@ H3K79me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX692076 anti-H3K27me3 (Upstate; 07-449; Lot: DAM1421462)|Murine MLL-AF9 leukemic cells His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX685921 anti-Zic 1/2 C-terminus|whole cerebellum Oth@ Zic1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX685762 H3K27me3 (Diagenode #pAb-069-050)|primordial germ cells His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX685760 H3K9me3 (Active Motif #39161)|primordial germ cells His@ H3K9me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX680476 Pol2|Millipore:17-672, lot54931|Heart Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX671666 sc7202|DIV7 mCTX neurons Oth@ Fos 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX671650 ab4729|DIV7 mCTX neurons His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX668241 H3K27Ac|Abcam AB4729|Neural Progenitors His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX651979 anti-FLAG M2 antibody (Sigma #F3165)|mouse embryonic stem cells Oth@ Epitope tags 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX648208 anti-H3K27me3 (07-449, Millipore)|ES Cell(2i) His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX648204 anti-H3K9me3 (ab8898, Abcam)|ES Cell(2i) His@ H3K9me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX648200 anti-H3K4me3 (39159, Active Motif)|ES Cell(2i) His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX621435 JMJD3-KO Nave CD4+ T cells Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX621434 WT Nave CD4+ T cells Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX620305 NIH3T3 fibroblasts Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX620301 H4 Ac (Millipore, 06-866 )|NIH3T3 fibroblasts His@ H4ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX620297 Pol II (Santa Cruz Biotechnology, N20, sc-899)|NIH3T3 fibroblasts Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX620293 H3K27Ac ( abcam, ab4729)|NIH3T3 fibroblasts His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX620289 CDK9 (Santa Cruz Biotechnology, sc-8338)|NIH3T3 fibroblasts Oth@ Cdk9 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX620285 BRD4 (C-terminus) made in house|NIH3T3 fibroblasts Oth@ Brd4 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX554623 anti-RNAPII N-20 (Santa Cruz, sc-899)|Embryonic Stem Cells Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX523469 H3K27me3|SV40T transformed fibroblasts His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX523468 EZH2|SV40T transformed fibroblasts Oth@ Ezh2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX517459 H3K27me3|mouse hippocampus His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX499143 Otx2 (Abcam ab21990-100ug)|embryonic stem cells (ESC) Oth@ Otx2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX499142 Oct4 (Santa Cruz sc-8628)|embryonic stem cells (ESC) Oth@ Pou5f1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX487083 CEBPA|p30-GMP-blast cells, from pool of Biological repl_I_II_III, CEBPA ChIP Oth@ Cebpa 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX481156 Abcam, ab8895|Liver His@ H3K4me1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX475275 Meis (Abcam, catalog# ab19867, lot# GR76623-1)|c-kit+ bone marrow cells Oth@ Meis1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX475271 TGIF (H-172) (Santa Cruz Biotechnology, catalog# sc-9084, lot# K2608)|c-kit+ bone marrow cells Oth@ Tgif1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX451039 CBP (CREBBP) Brindle 8690|primary CBP null MEF (e14.5) Oth@ Crebbp 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX451037 CBP (CREBBP) Brindle 8690|primary wild type MEF (e14.5) Oth@ Crebbp 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX398271 anti H3K9ac, Millipore 07-352, Lot: DAM1813175|Pro-B cell His@ H3K9ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX396320 H3K27me3 (Millipore 07-449)|in vitro differentiated cells His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX396250 H3K9,K14ac (Millipore, Catalog# 06-599, Lot# 2019589)|Embryonic stem cells His@ H3K9K14ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX392766 Sc-585x|Haftl pre-B cells Oth@ Ep300 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX378536 Millipore, 07-449|main olfactory epithelium His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX373602 H3K27me3|17-622, Millipore|Heart His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX373595 Gata4_Ab|sc-1237x, Santa Cruz|Heart Oth@ Gata4 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX373169 Custom GFP antibody|Embryonic Stem Cells Oth@ GFP 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX371504 mouse embryo fibroblasts (MEF) Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX366873 H2AX (Millipore, Catalog# 05-636, Lot# 2116620)|Mouse embryonic fibroblasts His@ H2A.XS139ph 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX352261 H4K5ac (Millipore 07-327)|Primary thioglycollate-elicited peritoneal macrophages His@ H4K5ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX341782 none|mouse brown preadipocytes, MLL4 KO, input InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX341780 none|mouse brown preadipocytes, WT, input InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX341766 MLL4|mouse brown preadipocytes, MLL4 KO, MLL4 ChIP Oth@ Kmt2d 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX341764 MLL4|mouse brown preadipocytes, WT, MLL4 ChIP Oth@ Kmt2d 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX338038 Non-immune rabbit serum|Splenic CD8+ T cells InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX338032 Non-immune rabbit serum|Splenic NK cells InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX338030 Runx3 poly clonal home made|Splenic NK cells Oth@ Runx3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX330326 anti-RNAPII (AC-055-100; Diagenode)|3T3-L1 adipocytes (Day 7) Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX330318 anti-PPAR (sc-7196; Santa Cruz)|3T3-L1 adipocytes (Day 7) Oth@ Pparg 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX323575 none (input)|embryonic fibroblasts treated with BAM factors InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX319859 H4K8ac (Millipore 07-327)|Bone marrow derived macrophages His@ H4K8ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX316693 Abcam (ab9050)|Embryonic stem cells His@ H3K36me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX316689 Abcam (ab9049)|Embryonic stem cells His@ H3K36me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX314740 Total PolII, (sc-899, Santa Cruz Biotechnology)|Embryonic Stem Cells Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX299549 H3K4me3|Millipore 07-473|Hematopoietic stem cells (HSC) His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX283752 Rabbit anti-Histone H3 trimethyl K4 (activemotif 35159, lot #: 01609004)|Mouse Prostate His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX283751 Rabbit Anti-Histone monomethyl-H3 (Abcam ab8895, Lot GR61280-1)|Mouse Prostate His@ H3K4me1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX283750 Rabbit Anti-ERG (Epitomics Clone EPR3864)|Mouse Prostate Oth@ Erg 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX283749 Rabbit Anti-AR (Epitomics Clone ER179)|Mouse Prostate Oth@ Ar 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX278531 H3K27Me3: Cell Signaling, C36B11|Haematopoietic progenitor cells His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX278527 H3K4Me3: Cell Signaling, C42D8|Haematopoietic progenitor cells His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX275826 Mouse embryonic day 11.5 (e11.5) face Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX272030 Embryonic cortex Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX268254 cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz|3617 cells expressing ER DBD mutant Oth@ Esr1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX266830 FLAG (Sigma, F3165)|Embryonic stem cells Oth@ Epitope tags 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX265337 RNAPII, Abcam, ab5131 Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX254823 anti-SUZ12 (Bethyl A302-407A)|Differentiated embryonic stem cells Oth@ Suz12 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX254807 anti-H3K27ac (ActiveMotif #39134)|Differentiated embryonic stem cells His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX244272 H3K36me3|liver tissue His@ H3K36me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX244248 H3K9me3|liver tissue His@ H3K9me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX228679 anti-HA (Roche 11867423001) Oth@ Epitope tags 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX228675 H3K4me3: Millipore 07-473, lot # DAM1731494 (7.5uL per ChIP) His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX228671 H3K36me3: Abcam ab9050-100, lot # 136352 His@ H3K36me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX228667 H3K27me3: Abcam ab6002-100, lot # 49749 His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX216307 AcH3K9,14; Anti-acetyl-Histone H3 Antibody His@ H3K9K14ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX211467 H3K27Me3,Cell Signaling, C36B11|Hematopoietic Stem Cells His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX211463 H3K4Me3, Cell Signaling, C42D|Hematopoietic Stem Cells His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX208063 mouse ES cells, shluc control, H3K4me3 ChIP His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX205968 Rad51|in vitro activated B cells Oth@ Rad51 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX204655 none|ES cell InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX204335 CTCF (Millipore, Cat. No. 07-729, Lot No. DAM1745366)|Limb bud Oth@ Ctcf 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX193439 none|input DNA InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX192273 H3K27me3|whole liver extract His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX192269 INPUT|whole liver extract InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX187223 H3K4me3|Th17 in vitro His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX187219 H3K4me2|Th17 in vitro His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX187202 Batf|Th17 in vitro Oth@ Batf 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX187197 Batf|Th0 in vitro Oth@ Batf 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX186073 H3K27me3 (07-449, Millipore)|Embryonic stem cell His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX185886 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Heart InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX185833 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Liver InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX183336 Input|conditional KO Rb MEF InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX172581 H3|Abcam, ab1791|Embryonic Stem Cell His@ H3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX172577 H3K27me3|Abcam, ab6002|Embryonic Stem Cell His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX172573 Suz12|Cell Signaling, 3737|Embryonic Stem Cell Oth@ Suz12 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX172339 BATF (from Ken Murphy rabbit , not commercial available)|CD4+ T Cells Oth@ Batf 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX150861 Anti-H3K27ac (Abcam # ab4729)|Primary bone marrow-derived macrophages (BMDM) His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX149637 RNA Pol II (Rpb1 N-terminus)|Santa Cruz SC-899|Embryonic stem cells Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX148818 H3K9ac Ab (Upstate 07-352, LOT# DAM1394804)|Pro-B His@ H3K9ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX148814 H3K4me3 Ab (Abcam ab8580-100)|Pro-B His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX148810 H3K4me2 Ab (Upstate 07-030, Lot# DAM1474881)|Pro-B His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX148796 Dynabeads M-280 Streptavidin (Invitrogen)|Pro-B Oth@ Biotin 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX142537 MyoD_(sc-32758)|sc-32758|This gene encodes a nuclear protein that belongs to the basic helix-loop-helix family of transcription factors and the myogenic factors subfamily. It regulates muscle cell differentiation by inducing cell cycle arrest, a prerequisite for myogenic initiation. The protein is also involved in muscle regeneration. It activates its own transcription which may stabilize commitment to myogenesis. (provided by RefSeq)|mouse monoclonal antibody raised against recombinant MyoD of mouse origin with an epitope mapping to amino acids 180-189. Antibody Target: MyoD|C2C12 Oth@ Myod1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX142517 Myogenin_(sc-12732)|sc-12732|Myogenin is a muscle-specific transcription factor that can induce myogenesis in a variety of cell types in tissue culture. It is a member of a large family of proteins related by sequence homology, the helix-loop-helix (HLH) proteins. It is essential for the development of functional skeletal muscle. (provided by RefSeq)|mouse monoclonal antibody; epitope mapping within amino acids 138-158 of myogenin of rat origin. Antibody Target: Myogenin|C2C12 Oth@ Myog 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX132022 Anti-Stat5B|Total T Cells Oth@ Stat5b 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX132021 Anti-Stat5A|Total T Cells Oth@ Stat5a 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX132020 Rabbit IgG|Total T Cells InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX127405 H3K4me2|APC-iPSC H3K4me2 ChIPseq His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX127392 H3K4me3|APC-iPSC H3K4me3 ChIPseq His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX127379 H3K27me3|APC-iPSC H3K27me3 ChIPseq His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX127365 APC-iPSC input DNA InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122482 none|none|bone marrow InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122439 Maff|bone marrow Oth@ Maff 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122435 Egr2|sc-20690|bone marrow Oth@ Egr2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122431 K4me3|07-473|bone marrow His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122421 K27Ac|ab4729|bone marrow His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122409 Irf1|ab52520|sc-640|bone marrow Oth@ Irf1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122401 Ets2|sc-351|bone marrow Oth@ Ets2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122397 E2f4|sc-512|bone marrow Oth@ E2f4 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122393 E2f1|sc-193|bone marrow Oth@ E2f1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122389 Ctcf|07-729|bone marrow Oth@ Ctcf 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122385 Ahr|ab81937|bone marrow Oth@ Ahr 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX118377 Anti-DMC1 (C-20)|Anti-DMC1 13R_testis_SSDS Oth@ Dmc1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX116257 IgG|whole brain InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX112917 Antibody H3K9me3 (Abcam ab8898-100, lot. 733953)|Embryonic Stem cells His@ H3K9me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX112533 RAD51 (H92)|sc 8349|adult testis Oth@ Rad51 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1121698 H3K4me2 (Abcam, Ab7766)|fibroblasts His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX110648 H3K4me1|AB8895|Embryonic stem cells His@ H3K4me1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX110646 H3K27Ac|AB4729|Embryonic stem cells His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1078992 STAT5A (Santa Cruz, sc-1081)|Mammary gland Oth@ Stat5a 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1078990 Pol II (abcam, ab5408)|Mammary gland Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1078987 EZH2 (Diagenode, C15410039)|Mammary gland Oth@ Ezh2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1063037 STAT1 (Santa Cruz, sc-346)|Pre-activated CD4+ T cells Oth@ Stat1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060576 Rabbit anti-H4K16ac (Millipore 07-762)|genomic DNA, Mnase His@ H4K16ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057077 H3.3|Adult Hippocampal NeuN+ Cells (~7 weeks postnatal) His@ H3.3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057076 Adult Hippocampal NeuN+ Cells (~7 weeks postnatal) Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1036775 H3K4me3 (Millipore, 07-473, lot 2019729)|embryonic fibroblasts (MEFs) His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1034725 J1 Embryonic Stem Cells Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1034723 Histone H3 (Abcam, ab1791)|J1 Embryonic Stem Cells His@ H3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1034721 Histone H2B (Abcam, ab1790)|J1 Embryonic Stem Cells His@ H2B 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX100339 H3K9me3|Liver tissue His@ H3K9me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX100335 H3K4me3|Liver tissue His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX083272 none|embryonic hindlimb bud, ChIP input InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX083262 none|embryonic forelimb bud, ChIP input InP@ Input control 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX055108 anti-FlagM2 (Sigma, 088k6018)|mouse embryonic stem cells Oth@ Epitope tags 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX047643 C/EBPbeta|Preadipocyte cell line Oth@ Cebpb 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX041307 anti-REST (Santa Cruz, #H-290)|Embryonic Stem Cells (ESCs) wildtype Oth@ Rest 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX039350 Tet1 rabbit polyclonal antibodies|Mouse ES cells Oth@ Tet1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX029238 Mouse nucleus accumbens 24 hr Unc@ Unclassified 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX026294 Ezh2|Embryonic Stem cells Oth@ Ezh2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX026281 H3K36me3|Embryonic Stem cells His@ H3K36me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX026277 H3K27me3|Embryonic Stem cells His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX026273 H3K4me3|Embryonic Stem cells His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX026257 Smad3|AB28379|Embryonic stem cells Oth@ Smad3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX021639 H3K36me3<AbCam#9050>|primary CD4+ T cells from spleen and lymph nodes His@ H3K36me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX021637 H3K27me3<Millipore #07-449>|primary CD4+ T cells from spleen and lymph nodes His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX021635 H3K4me3<AbCam#8580>|primary CD4+ T cells from spleen and lymph nodes His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX021438 anti-PU.1 (T-21)|ES-cell derived erythroid progenitors Oth@ Spi1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX021432 anti-PU.1 (T-21)|Murine erythroleukemia (MEL) cells stably transfected with Gata-1 fused to ER Oth@ Spi1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX020986 anti-Pol II Serine 2 phosphorylated|Macrophages Pol@ RNA Polymerase II 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX019390 CTCF|Upstate, Cat# 07-729, Lot# 1350637|3T3-L1 Oth@ Ctcf 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX019389 H3K36me3|Abcam, Cat# ab9050, Lot# 136353|3T3-L1 His@ H3K36me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX019388 H3K27me3|Upstate, Cat# 07-449, Lot# DAM1387952|3T3-L1 His@ H3K27me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX019387 H3K27ac|Abcam, Cat# ab4729, Lot# 31456|3T3-L1 His@ H3K27ac 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX019386 H3K4me1|Abcam, Cat# ab8895, Lot# 268176|3T3-L1 His@ H3K4me1 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX019385 H3K4me2|Abcam, Cat# ab7766, Lot# 56293|3T3-L1 His@ H3K4me2 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX019384 H3K4me3|Abcam, Cat# ab8580, Lot# 376637|3T3-L1 His@ H3K4me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX018508 RAP1|embryonic fibroblast Oth@ Terf2ip 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX016860 anti-GFP (Cristea et al., 2005)|Embryonic stem cells Oth@ GFP 4 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX016856 H3K36me3 (Abcam ab9050)|Embryonic stem cells His@ H3K36me3 4 4 http://www.ncbi.nlm.nih.gov/sra?term=ERX132659 Anti H3K27me3 Millipore 07-449 (lot 1662421) His@ H3K27me3 2 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX668238 None|None WCE|Neural Progenitors InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX994933 H3K27me3|T cells His@ H3K27me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX742695 Irf7|GM-CSF treated myeloid cells Oth@ Irf7 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX700328 anti-H3K27Ac (Abcam AB4729)|retina His@ H3K27ac 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX692065 anti-H3K9me3 (Abcam; ab8898; Lot: GR88132-1)|Murine MLL-AF9 leukemic cells His@ H3K9me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX591720 miwi2KO_GermCellsTestis_MACS_inputDNA InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX591718 miwi2HET_GermCellsTestis_MACS_inputDNA InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX591715 a-H3K9me3|miwi2HET_Liver_H3K9me3 His@ H3K9me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX591714 miwi2HET_Liver_inputDNA InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX398272 anti H3K4me3, Diagenode pAb-003-050, Lot.: A5051-001P|Pro-B cell His@ H3K4me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX381467 input|spermatocytes InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX352995 anti-Flag antibody|iMN-ESCs Oth@ Epitope tags 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX283738 None|Mouse Prostate InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX265330 input InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX213850 Millipore|07-473 His@ H3K4me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX213849 Abcam|ab8895 His@ H3K4me1 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX213848 Millipore|07-449 His@ H3K27me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX213839 Santa|sc-6553 Oth@ Foxa1 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX213404 Histone H3 trimethyl Lys27 His@ H3K27me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX204323 Limb bud Unc@ Unclassified 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX170832 neuronal progenitor cells Unc@ Unclassified 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX143279 Mll3|Liver tissue Oth@ Kmt2c 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122510 Egr1|ab54966-100|sc-110|bone marrow Oth@ Egr1 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122495 Rel|sc-71|sc-70|bone marrow Oth@ Rel 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122475 Stat3|A302-406A|bone marrow Oth@ Stat3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122468 Rela|A301-824A|sc-372|bone marrow Oth@ Rela 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122464 Relb|A302-183A|sc-226|bone marrow Oth@ Relb 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX122402 Hif1a|NB100-134|bone marrow Oth@ Hif1a 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX116589 H3K4Tm3|ACH3_ChIPseq His@ H3K4me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX116585 H3K9Ac|TMK4_ChIPseq His@ H3K9ac 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1121690 none|fibroblasts InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1078980 none|Mammary gland InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1046550 RAG2|preB Oth@ Rag2 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038840 immortalized fibroblast Unc@ Unclassified 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX100340 H3Pan|Liver tissue His@ H3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX080243 none|KH2 InP@ Input control 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX035974 H3K27me3|Doxycycline-induced MEFs His@ H3K27me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX035969 H3K4me2|Doxycycline-induced MEFs His@ H3K4me2 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX029267 Pol II|MEF Pol@ RNA Polymerase II 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX029264 H3K4me3|MEF His@ H3K4me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX029263 H3K9Ac|MEF His@ H3K9ac 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX029262 H3K36me3|MEF His@ H3K36me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX028862 anti-H4K8Ac|Macrophages His@ H4K8ac 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX028858 anti-H4K5Ac|Macrophages His@ H4K5ac 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX028854 anti-H4K12Ac|Macrophages His@ H4K12ac 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX028850 anti-H3Ac|Macrophages His@ H3ac 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX028846 anti-Brd3|Macrophages Oth@ Brd3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX023716 PTIP|mouse B cells Oth@ Paxip1 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX020989 anti-Pol II total|Macrophages Pol@ RNA Polymerase II 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX020977 anti-H3K4me3|Macrophages His@ H3K4me3 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX020971 anti-CDK9 (P-TEFb)|Macrophages Oth@ Cdk9 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX020966 anti-H4Ac|Macrophages His@ H4ac 1 4 http://www.ncbi.nlm.nih.gov/sra?term=SRX020959 anti-Brd4|Macrophages Oth@ Brd4 1 4 http://www.ncbi.nlm.nih.gov/sra?term=ERX631803 BRD4 Oth@ Brd4 1 4 http://www.ncbi.nlm.nih.gov/sra?term=ERX320409 flag Oth@ Epitope tags 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX957693 none|newborn lens, input InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX956778 anti-H3K27ac|Flt3L cultured dendritic cells His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX956777 anti-H3K4me1|Flt3L cultured dendritic cells His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX956776 anti-p300|Flt3L cultured dendritic cells Oth@ Ep300 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX950628 CEBPb, sc-150, Santa Cruz|Liver tissue Oth@ Cebpb 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX868181 FGFR1 (Abcam, ab10646)|Embryonic Stem Cells Oth@ Fgfr1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX865028 none, input_|mouse primary CD4+ T cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX838207 HA (homemade)|GATA1 null erythroblasts Unc@ Unclassified 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX818834 none|Satellite cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX818827 Anti-H4K16ac (Millipore, CS204361)|Satellite cells His@ H4K16ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX818464 H3K79me3, Diagenode cat#pAb-068-050|Hematopoietic progenitor cells His@ H3K79me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX818461 H3K79me2, Abcam ab3594|Hematopoietic progenitor cells His@ H3K79me2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX805967 IRF1 (santa cruz, sc-640)|Primary bone marrow-derived macrophages (BMDM) Oth@ Irf1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX805964 STAT2 (santa crus, sc-950)|Primary bone marrow-derived macrophages (BMDM) Oth@ Stat2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX804278 none|Mouse kidney cortex, input InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX804275 WT1 (Santa Cruz, sc-192, Lot F1711)|Mouse kidney cortex, WT1 ChIP Oth@ Wt1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX802059 39663, Active Motif|mouse embryonic stem cells E14 Oth@ Rnf2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX791599 H3K27ac|mouse saline NAc H3K27ac ChIPseq His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX791595 H3K27ac|mouse cocaine NAc H3K27ac ChIPseq His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX766227 mouse IgG (278-010, Ancell)|Primary proliferating myoblasts InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX764850 H3K4me3 (Abcam ab1012)|TT2 His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX754574 CTCF (Cell Signaling 2899)|Embryonic stem cells Oth@ Ctcf 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX745827 PPAR alpha (Santa Cruz: H-98, sc-9000)|burst-forming unit erythroid (BFU-E) Oth@ Ppara 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX745826 GR (Santa Cruz: H300, sc-8992)|burst-forming unit erythroid (BFU-E) Oth@ Nr3c1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX734394 SUZ12 (Abcam, 12073)|MLL-AF9-puro transformed murine leukemia cell line Oth@ Suz12 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX734392 H3K27me3 (Millipore 07-449)|MLL-AF9-puro transformed murine leukemia cell line His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX734391 none|MLL-AF9-puro transformed murine leukemia cell line InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX722327 Anti-Histone H3 (acetyl K27) antibody|activated B cell His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX717596 H3K27me3 (Abcam, ab6002)|Spermatocytes His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX707686 H3K27me3 Abcam ab6002)|CD43- splenic B cells His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX707683 H3K4me3 (Abcam ab8580)|CD43- splenic B cells His@ H3K4me2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX707680 RNA Pol II (N-20)(Santa Cruz sc-816x)|CD43- splenic B cells Pol@ RNA Polymerase II 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX707677 None (input)|CD43- splenic B cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX703666 serine 5-phosphorylated RNA Polymerase II (Abcam)|in vitro activated B cells Pol@ RNA Polymerase II 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX680471 H3K4me3|Active Motif:39159, lot832164|Heart His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX680470 H3K4me1|Abcam: ab8895, lot667543|Heart His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX672423 H3K27me3|Abcam #ab6002|Differentiated motor neuron His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX661497 GR, sc-1004, Santa Cruz|bone marrow-derived macrophages Oth@ Nr3c1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX647905 crosslink|anti-DAXX (sc-7512)|Embryonic stem cells Oth@ Gad1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX647899 crosslink|anti-H3K9me3 (ab8898)|Embryonic stem cells His@ H3K9me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX542628 HA antibody, Abcam ab9110|embryonic fibroblasts Oth@ Epitope tags 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX542562 none|embryonic fibroblasts, E13.5 InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX542561 c-Myc N262 (Santa Cruz, catalog# sc764, lot# G0111)|embryonic fibroblasts, E13.5 Oth@ Myc 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX540717 H3K4me3 (Abcam, 8580)|Dnmt TKO ESCs His@ H3K4me2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX535286 none|WT MEF InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX529400 R&D hSOX3 (AF2569)|Neural Progenitor Cells Oth@ Sox3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX523457 ATRX|SV40T transformed fibroblasts Oth@ Atrx 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX520230 None|embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX517513 anti-GTF2B (sc-225)|whole heart Oth@ Gtf2b 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX505080 Abcam (ab9050)|primary Rag2 -/- thymocytes His@ H3K36me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX504224 H3K27ac|ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX504223 H3K4me1|ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX502905 DF308 (Olig2) Oth@ Olig2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX499137 none|epiblast like cells (EpiLC) InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX485453 H3K27m3(Millipore #07-449)|primary NK cells from spleens purified by negative selection His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX485450 H3K36m3(AbCam #9050)|primary NK cells from spleens purified by negative selection His@ H3K36me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX485447 H3K4m3(Millipore #04-745)|primary NK cells from spleens purified by negative selection His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX481630 none|embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX451627 CEBPb (sc-150)|BV2 cells Oth@ Cebpb 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX451624 CEBPa (sc-61)|BV2 cells Oth@ Cebpa 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX451621 PU.1 (sc-352)|BV2 cells Oth@ Spi1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX451618 H3K4me2 (Millipore 07-030)|BV2 cells His@ H3K4me2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX442887 None|Embryonic fibroblast InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX442883 Meis1/2 (Santa Cruz Biotechnology, sc-10599X, lot# C2912)|Embryonic fibroblast Oth@ Meis1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX437467 none|In vitro effector CD8+ T cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX391771 ICSBP Antibody (Santa Cruz biotechnology inc., C-19)|Flt3 ligand derived dendritic cells Oth@ Irf8 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX387735 SRC-2 antibody (Bethyl Laboratories, catalog number A300-346, lot number A-1)|Liver Oth@ Ncoa2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX385378 Custom GFP antibody from MPI-CBG anti-GFP 2007 (Vermeulen et al., 2010)|Embryonic Stem Cells (ESCs) Oth@ GFP 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX381489 RING1B ab (Atsuta et al., 2001; PMID 11289226)|Embryonic stem cells, tamoxifen treated, RING1B ChIP Oth@ Rnf2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX381486 RING1B ab (Atsuta et al., 2001; PMID 11289226)|Embryonic stem cells, untreated control, RING1B ChIP Oth@ Rnf2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX381483 KDM2B ab (Farcas et al., 2012; PMID 23256043)|Embryonic stem cells, tamoxifen treated, KDM2B ChIP Oth@ Kdm2b 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX381480 KDM2B ab (Farcas et al., 2012; PMID 23256043)|Embryonic stem cells, untreated control, KDM2B ChIP Oth@ Kdm2b 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX353848 E36 ES cells Unc@ Unclassified 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX353845 E36 ES cells EED KO Unc@ Unclassified 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX348398 anti-Ezh2 : BD Transduction Laboratories ref : 612666|TT2 Oth@ Ezh2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX346173 anti-H3K9ac (active motif 39918)|whole heart His@ H3K9ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX341778 H3K27ac|mouse brown preadipocytes, MLL4 KO, H3K27ac ChIP His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX341776 H3K27ac|mouse brown preadipocytes, WT, H3K27ac ChIP His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX341774 H3K4me3|mouse brown preadipocytes, MLL4 KO, H3K4me3 ChIP His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX341772 H3K4me3|mouse brown preadipocytes, WT, H3K4me3 ChIP His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX341770 H3K4me1|mouse brown preadipocytes, MLL4 KO, H3K4me1 ChIP His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX341768 H3K4me1|mouse brown preadipocytes, WT, H3K4me1 ChIP His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX338040 Monoclonal anti-H3K4me1|Splenic CD8+ T cells His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX329257 Anti-EGR2 (Covance, PRB-236P D13BF00486)|T cells Oth@ Egr2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX323579 none (input)|embryonic fibroblasts InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX317223 Anti-H3K4me3 Millipore (#07-473)|Testis His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX316673 anti-Irf4 (Santa Cruz; sc-6059)|purified primary B cells from Bi-8i mice; stimulated for 3 Days; anti-Irf4 ChIP Oth@ Irf4 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX316670 anti-Irf4 (Santa Cruz; sc-6059)|purified primary B cells from Bi-8i mice; stimulated for 1 Days; anti-Irf4 ChIP Oth@ Irf4 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX310229 LHX2|Mouse back skins Oth@ Lhx2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX306691 neonatal tail tip fibroblasts, Hotair knockout Unc@ Unclassified 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX306690 neonatal tail tip fibroblasts, Hotair wildtype Unc@ Unclassified 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX305914 H3K27me3 (Millipore 07-449)|MES stage cultures, H3K27me3 His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX305901 H3K4me1 (Abcam ab8895)|CM stage cultures, H3K4me1 His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX305898 H3K4me1 (Abcam ab8895)|CP stage cultures, H3K4me1 His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX305895 H3K4me1 (Abcam ab8895)|MES stage cultures, H3K4me1 His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX305892 H3K4me1 (Abcam ab8895)|ESC stage cultures, H3K4me1 His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX286498 none|hindlimb muscles InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX286497 H3K27me3 (Millipore 07-449)|hindlimb muscles His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX286496 H3K4me3 (Abcam 8580)|hindlimb muscles His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX286414 mIgG (sc-2025, SantaCruz)|mIgG1 InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX282671 N/A (input sample)|ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX275822 Mouse embryonic day 11.5 (e11.5) midbrain Unc@ Unclassified 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX273261 CTCF|murine primary activated B cells Oth@ Ctcf 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX264583 Streptavidin T1 dynabeads (Invitrogen)|RAW macrophages Oth@ Biotin 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX254801 anti-FLAG (Sigma M2 F1804)|Differentiated embryonic stem cells Oth@ Epitope tags 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX244275 IgG|liver tissue InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX216310 AcH4K12; Anti-Histone H4 (acetylated) (acetyl K12) antibody His@ H4K12ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX209803 N/A|NAc dissection from 3-5 animals InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX204644 Flag-Tag ChIP-Seq|Reconstitute Flag tag MEF cell Oth@ Epitope tags 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX204639 H2A.X|ES cell His@ H2A.X 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX203384 no antibody|Embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX197270 anti-H3K27ac|Primary bone marrow-derived macrophages, IL4 for 4hrs, H3K27ac ChIP His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX197264 anti-H3K4me1|Primary bone marrow-derived macrophages, IL4 for 4hrs, H3K4me1 ChIP His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX192265 H3K4me2|whole liver extract His@ H3K4me2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX190466 Monoclonal ANTI-FLAG M2, Clone M2 (SIGMA, F1804)|Neural progenitor like cells Oth@ Epitope tags 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX188795 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|MEL Pol@ RNA Polymerase II 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX187261 RORg|Th17 in vitro Oth@ Rorc 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX187206 c-Maf|Th17 in vitro Oth@ Maf 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX186796 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|MEL His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX186065 H3K4me3 (04-745, Millipore)|Embryonic stem cell His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX176322 In house anti-H3K9me3 #4861|Embryonic Fibroblasts His@ H3K9me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX176319 In house anti-H3K9me3 #1926|Embryonic Fibroblasts His@ H3K9me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX174839 WCE|Day5 motor neurons InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX174836 anti-V5 (Abcam, ab15828)|Pseudo IP against V5 Oth@ Epitope tags 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX172336 cJUN (Abcam, ab31419, GR30-33)|CD4+ T Cells Oth@ Jun 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX170719 none|E11.5 Embryo Trunk InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX155019 Santa Cruz SC-2025|Quiescent B cells, lipopolysaccharide (LPS) treatment for 4hrs InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX151673 H3K27me3 (07-030, Upstate, Charlottesville, VA, lot 24440, cat.#07-449)|retina His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX149182 H3K27ac (ab4729, Abcam)|FACS-purified Pou5f1-GFP-positive germ cells His@ H3K27ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX149181 H3K27me3 (07-449, Millipore)|FACS-purified Pou5f1-GFP-positive germ cells His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX149179 H3K4me3 (04-745, Millipore)|FACS-purified Pou5f1-GFP-positive germ cells His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX149006 none|murine embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX147767 IgG (Thermo scientific, 23212, lot LI150449)|embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX144175 p300, SantaCruz: sc-585x|C1C12 myotubes differentiated for 96h Oth@ Ep300 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX144172 p300, SantaCruz: sc-585x|Growing C1C12 myoblasts Oth@ Ep300 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX120170 SMC1|Chromatin IP against SMC1 Oth@ Smc1a 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX118373 Anti-DMC1 (C-20)|Anti-DMC1 B6_testis_SSDS Oth@ Dmc1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX118180 RXR|C57BL/6 LXRdKO mouse liver Oth@ Rxra 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX118177 RXR|C57BL/6 wild type mouse liver Oth@ Rxra 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX118172 LXR|C57BL/6 wild type mouse liver Oth@ Nr1h3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX115559 H2Bub, Millipore: 05-1312, clone 56|C1C12 myotubes differentiated for 96h His@ H2Bub 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX115556 H2Bub, Millipore: 05-1312, clone 56|Growing C1C12 myoblasts His@ H2Bub 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX112541 IgG|adult testis InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX107337 H3K36me3|primary CD4+ T cells from spleen and lymph nodes His@ H3K36me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060575 Rabbit anti-H4K8ac (Millipore: 07-328)|genomic DNA, Mnase His@ H4K8ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060567 Rabbit anti-crotonllysine (PTM Biolabs: #PTM-501)|genomic DNA, Mnase Oth@ Crotonyl lysine 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060562 Mouse anti-H3K27me3 (Abcam: ab6002)|genomic DNA, Mnase His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057055 HA.11|Primary Cortical Neurons (E16.5 DIV8) Unc@ Unclassified 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1054888 none|Basal Ganglia and Septum InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1054887 anti-OTX2 (R&D, catalog# AF1979, lot# KNO0211051)|Basal Ganglia and Septum Oth@ Otx2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1054610 Anti-H3K4me3 (Millipore)|pooled bone marrow His@ H3K4me2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX104390 None WCE|Embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1022095 crosslink|anti-KAP1 (ab10483)|Embryonic stem cells Oth@ Trim28 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1022092 crosslink|anti-KAP1 (ab22553)|Embryonic stem cells Oth@ Trim28 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX101692 Sox11 (M. Wegner)|Neurons Oth@ Sox11 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX101689 Sox2 (Millipore)|Neural progenitor cells Oth@ Sox2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX101686 Sox3 (T. Edlund)|Neural progenitor cells Oth@ Sox3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1013535 H2AZ (abcam, ab4174, GR35527-1)|murine embryonic stem cells His@ H2A.Z 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1013534 H3 (abcam, ab1791, GR204148-1)|murine embryonic stem cells His@ H3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1013533 none (histone_INPUT)|murine embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1013532 Klf4 (kind gift from Dr. Ng from the Genome Institute of Singapore)|murine embryonic stem cells Oth@ Klf4 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1013531 none (Klf4_INPUT)|murine embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX099399 none|mouse Ik knockout DP thymocytes InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX091915 H3K27me3 (Millipore, 07-449)|Mouse back skins His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX091914 H3K79me2 (Abcam, ab3594)|Mouse back skins His@ H3K79me2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX091913 H3K4me3 (Abcam, ab1012)|Mouse back skins His@ H3K4me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX080249 Lin et al. 2010 (Mol. Cell)|KH2 Oth@ Ell2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX080169 anti-CTCF (SantaCruz #15914)|ES_CTCF_ChIPseq Oth@ Ctcf 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX063942 H3K9me3 (Active Motif, cat #39161, lot #170)|Embyonic Stem Cell His@ H3K9me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX047693 H3K27me3|Terminally differentiated Neurons (TN) His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX047147 H3K4me1|Abcam AB8895|ZHBTc4 ES cells His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX041333 R&D systems, anti-stat 5B serum PA-ST5B|Dendritic Cell in Spleen Oth@ Stat5b 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX041330 Invtrogen, monoclonal antibody ST3-5G7|Dendritic Cell in Spleen Oth@ Stat3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX041304 anti-REST (Santa Cruz, #H-290)|Neuronal Progenitor (NP) Cells wildtype Oth@ Rest 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX032889 None|Homogenized Mouse Liver InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX032487 anti-H3K27me3|Terminally differentiated Neurons (TN) His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX032478 anti-H3K27me3|Neuronal Progenitor (NP) Cells His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX032468 anti-H3K27me3|Embryonic Stem Cells (ESCs) His@ H3K27me3 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX028981 BCL6|primary bone marrow-derived macrophages Oth@ Bcl6 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX028532 Ring1B|Embryonic stem cells knockout for Eed Oth@ Rnf2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX027449 DMC1 (C-20)|sc 8973|pups testis Oth@ Dmc1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX027336 H3K4me1|Abcam AB8895|Embyonic stem cells His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX026472 E14 TG2A mouse embryonic stem cells Unc@ Unclassified 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX026469 pSmad2|ab16509|E14 TG2A mouse embryonic stem cells Oth@ Smad2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX021888 H3K4me1 (ab8895)|E2A-/- pre-pro-B cell His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX020951 H3K9ac (Upstate Biotechnologies, 06-942)|Chromatin IP against acetylated H3 lysine 9 His@ H3K9ac 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX019777 H3K4me1 (Vendor: Abcam, cat# ab8895, lot# 721955)|PUER cells His@ H3K4me1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX018809 RAG2 (rabbit polyclonal antibody raised to RAG2 aa 70-516 (Leu and Schatz, PMID: 7565717))|Total thymocytes Oth@ Rag2 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX017323 native ChIP input control. No antibody.|Embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX017072 RNA Pol II (Rpb1 N-terminus)|ZHBTc4 mES cells Pol@ RNA Polymerase II 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX016861 native ChIP input control. No antibody.|Embryonic stem cells InP@ Input control 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX014422 SetDB1|V6.5 mES cells Oth@ Setdb1 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX012925 RNA-polymerase II|mouse bone marrow-derived macrophages Pol@ RNA Polymerase II 3 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX006970 H3K4me3 Diagenode His@ H3K4me3 2 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX663314 none|mouse embryonic fibroblasts InP@ Input control 2 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX252294 anti-H3K4me3 His@ H3K4me3 2 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX187192 B-ATF|Th17 in vitro Oth@ Batf 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX764845 H3K27me3 (Diagenode pAb-069-050)|TT2 His@ H3K27me3 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX591721 a-H3K9me3|miwi2KO_GermCellsTestis_MACS_H3K9me3 His@ H3K9me3 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX591719 a-H3K9me3|miwi2HET_GermCellsTestis_MACS_H3K9me3 His@ H3K9me3 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX535293 Millipore, 07-449|KO MEF His@ H3K27me3 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX535292 Millipore, 07-449|WT MEF His@ H3K27me3 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX398229 n.a.|Pro-B cell Unc@ Unclassified 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX376975 H3K27ac|male_WT_LF His@ H3K27ac 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX376974 H3K27ac|male_WT_HF His@ H3K27ac 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX353806 none|Primary B-cells InP@ Input control 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX344982 none|myoblasts_input InP@ Input control 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX344979 none|Input_ING1_flag_myotubes InP@ Input control 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX344965 anti-FLAG|ING1_flag_myotubes Oth@ Epitope tags 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX340955 Pu1|FDCPmix Oth@ Spi1 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX320035 None|mouse heart InP@ Input control 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX272970 none|spleen InP@ Input control 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX227231 KDM6A Oth@ Kdm6a 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX213847 Abcam|ab4729 His@ H3K27ac 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX193356 none|3T3-L1 preadipocytes InP@ Input control 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX184860 Treg Foxp3 ChIP Oth@ Foxp3 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX122472 Runx1|ab61753|sc-8564|bone marrow Oth@ Runx1 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX119446 RPA|Spleen Oth@ Rpa1 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX1046547 RAG1|preB Oth@ Rag1 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX100302 H3K9Ac|Liver His@ H3K9ac 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX066548 none|whole heart InP@ Input control 1 3 http://www.ncbi.nlm.nih.gov/sra?term=SRX003861 HEK4me3 His@ H3K4me3 1 3 http://www.ncbi.nlm.nih.gov/sra?term=ERX204061 p300 Oth@ Ep300 1 3 http://www.ncbi.nlm.nih.gov/sra?term=ERX204059 HNF4a Oth@ Hnf4a 1 3 http://www.ncbi.nlm.nih.gov/sra?term=ERX204058 CEBPa Oth@ Cebpa 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX984573 BirAV5-FLBio|AB1 ES cells Oth@ Biotin 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX984569 BirAV5-FLBioGcn5|AB1 ES cells Oth@ Biotin 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX984198 none|2o 1B MEFs InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX984197 c-Myc antibody (sc-764, Santa Cruz)|2o 1B MEFs Oth@ Myc 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX976734 Bethyl 300-055A|immortalized fibroblast Oth@ Smc1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX976724 none|immortalized fibroblast InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX968951 Total MeCP2 antibody (Chen et al. 2003)|Frontal Cortex Oth@ Mecp2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX967653 Flag, Sigma M2|E9.5 hearts Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX963273 ab14955, abcam|Embryonic stem cells His@ H3S10ph 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX957677 Pax6 (Millipore, ab2237, lot# NG1731333)|e12.5 embryonic forebrain, Pax6 ChIP Oth@ Pax6 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX956775 anti-Irf8|Flt3L cultured dendritic cells Oth@ Irf8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX956771 anti-Batf3|Flt3L cultured dendritic cells Oth@ Batf3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX894105 anti-estrogen receptor (Santa Cruz Biotechnology sc-8002X)|splenic B cells Oth@ Esr1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX886487 Trim33 (A301-060A; Bethyl)|MLL-AF9/NrasG12D murine cell line Oth@ Trim33 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX886484 Trim33 (A301-060A; Bethyl)|TAL transgenic/HEB heterozygous with Notch truncations (provided by I.Aifantis, NYU) Oth@ Trim33 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX886481 Trim33 (A301-060A; Bethyl)|pro B-Cell Oth@ Trim33 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX886476 H3K4me3 (07-473; Millipore)|Bcr-Abl transformed p19Arf null B-ALL His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX886474 H3K27ac (ab4729; Abcam)|Bcr-Abl transformed p19Arf null B-ALL His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX886472 Trim33 (A301-060A; Bethyl)|Bcr-Abl transformed p19Arf null B-ALL Oth@ Trim33 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX886470 none|Bcr-Abl transformed p19Arf null B-ALL InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885959 Anti H3 Acetyl K9, K14 (Millipore 06-499)|Dendritic cells His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885958 none (input)|Dendritic cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885801 Prdm1/Blimp-1 mutant anti-Irf-1 input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885799 polyclonal rabbit anti-Irf1 antibody (M-20)|Prdm1/Blimp-1 mutant anti-Irf-1 ChIP Oth@ Irf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885795 control rabbit IgG|wild type IgG ChIP InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885793 polyclonal rabbit anti-Irf1 antibody (M-20)|wild type anti-Irf-1 ChIP Oth@ Irf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885789 anti-Blimp-1-eGFP input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885787 GFP Tag Antibody (3E6)|anti-Blimp-1-eGFP ChIP Oth@ Prdm1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX884095 Myb (sc-7874; Santa Cruz)|MLL-AF9/NrasG12D murine cell line Oth@ Myb 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX884093 C/EBP (sc-150; Santa Cruz)|MLL-AF9/NrasG12D murine cell line Oth@ Cebpa 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX884091 C/EBPa (sc-61; Santa Cruz)|MLL-AF9/NrasG12D murine cell line Oth@ Cebpa 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX884089 Erg (sc-354; Santa Cruz)|MLL-AF9/NrasG12D murine cell line Oth@ Erg 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX884087 Fli1 (ab15289; Abcam)|MLL-AF9/NrasG12D murine cell line Oth@ Fli1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX884085 Pu.1 (sc-352; Santa Cruz)|MLL-AF9/NrasG12D murine cell line Oth@ Spi1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX884082 Histone H3 (ab1791; Abcam)|MLL-AF9/NrasG12D murine cell line His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX882865 H3AC (acetylated histone H3)|ESC differentiated day 6 cells His@ H3ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX882863 H3AC (acetylated histone H3)|ESC differentiated day 4 cells His@ H3ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX882861 H3AC (acetylated histone H3)|ESC differentiated day 2 cells His@ H3ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX882859 HDAC1 (3 FLAG-HDAC1)|ESC differentiated day 2 cells Oth@ Hdac1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX878776 anti-p300 (EP300) antibody|3134 cells Oth@ Ep300 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX873344 none|Embryonic stem cells (ESCs) InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX873342 Sirt6 (Cell Signaling Technology, 12486 in a ratio of 1ml/2e7 cells)|Embryonic stem cells (ESCs) Oth@ Sirt6 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX871527 GKLF, Santa Cruz Biotechnology, sc-20691, Lot# J1212|Atherosclerosis lesion Oth@ Klf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX869311 H3K27me3(Millipore, #07-449)|Haunt knock out in 46C cells|Haunt pKO mES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX869310 H3K27me3(Millipore, #07-449)|embryonic stem cells|46C mES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX869307 H3K4me3 (Abcam, ab8580)|Haunt knock out in 46C cells|Haunt pKO mES cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX869306 H3K4me3 (Abcam, ab8580)|embryonic stem cells|46C mES cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX868556 H3K27ac|Day10 Neurons His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX868552 H3K27ac|Neuronal Progenitors His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX868179 Nur77(Santa Cruz, SC-5569)|Embryonic Stem Cells Oth@ Nr4a1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX868178 RXR (Santa Cruz, SC-774)|Embryonic Stem Cells Oth@ Rxra 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX852567 PolII (Abcam, cat# ab5408, lot# GR106949-6, 5ug)|Mammary tissues Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX852565 EZH2 (Diagenode, cat# C15410039 and lot# 003)|Mammary tissues Oth@ Ezh2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX852563 EZH1 (gift from Sartorelli, Mousavi et al. Mol. Cell 2012)|Mammary tissues Oth@ Ezh1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX849884 input|embryonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX849880 Oct4|embryonic stem cells Oth@ Pou5f1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX838552 none (input)|8w Mouse Testis InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX838551 dmrt1 Antibody (PMID: 11040213)|8w Mouse Testis Oth@ Dmrt1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX838205 Bethyl BRD2 A302-583A|GATA1 null erythroblasts Oth@ Brd2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX836258 none|Bone marrow derived macrophages InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX836256 CREB (clone: 48H2)|Bone marrow derived macrophages Oth@ Creb1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX832481 none (input)|Naive T cells from spleen and nodes InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX832480 anti-Ig (Dako, catalog# X0936, lot# 73343)|Naive T cells from spleen and nodes InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX832479 anti-BATF (Cell Signalling, catalog# sc8638, lot# 1)|Naive T cells from spleen and nodes Oth@ Batf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX832478 anti-IRF4 (Santa Cruz, catalog# sc6059, lot# B2614)|Naive T cells from spleen and nodes Oth@ Irf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX832477 anti-NLRP3 (Adipogen, catalog# AG-20B-0014, lot# A22141102)|Naive T cells from spleen and nodes Oth@ Nlrp3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX832476 anti-STAT6 (Cell Signalling, catalog# sc9362, lot# 4)|Naive T cells from spleen and nodes Oth@ Stat6 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX825833 RUNX1|myeloid progenitors_expansion cells Oth@ Runx1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX825829 RUNX1/ETO|Hemogenic endothelium (HE) cells Oth@ Runx1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX823636 AtT20 cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX823606 Mbd3 (Bethyl, A302-528A)|ES cell culture Oth@ Mbd3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX823605 Chd4 (Abcam, ab70469)|ES cell culture Oth@ Chd4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX804268 none|Primary culutured mouse cortical neurons (DIV 8) InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX804267 H3K9S10|Millipore (05-809)|Primary culutured mouse cortical neurons (DIV 8) His@ H3K9S10me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX803859 RAD23B|murine D3 embryonic stem cell line Oth@ Rad23b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX803858 IgG|murine D3 embryonic stem cell line InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX802056 sc-5279, Santa Cruz|mouse embryonic stem cells E14 Oth@ Pou5f1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX800015 Made in Lab (Harms et al. 2014. Cell Metab.)|Prdm16 Knockout BAT Oth@ Prdm16 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX800013 Made in Lab (Harms et al. 2014. Cell Metab.)|Wildtype BAT Oth@ Prdm16 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX766229 anti H3K27ac|Primary proliferating myoblasts His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX766226 anti H3K4me1|Primary proliferating myoblasts His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX764852 pan-H3 (Sigma I8140)|TT2 His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX761313 E16.5 sorted germ cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760615 anti-H3K27ac|Kupffer cells with CD45.1 mark His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760614 anti-H3K4me2|Kupffer cells with CD45.1 mark His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760613 anti-H3K4me1|Kupffer cells with CD45.1 mark His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760612 anti-H3K27ac|Spleen red pulp macrophages with CD45.1 mark His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760611 anti-H3K4me2|Spleen red pulp macrophages with CD45.1 mark His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760610 anti-H3K4me1|Spleen red pulp macrophages with CD45.1 mark His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760609 anti-H3K27ac|Peritoneal cavity macrophages with CD45.1 mark His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760608 anti-H3K4me2|Peritoneal cavity macrophages with CD45.1 mark His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760607 anti-H3K4me1|Peritoneal cavity macrophages with CD45.1 mark His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760606 anti-H3K27ac|Lung macrophages with CD45.1 mark His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760605 anti-H3K4me2|Lung macrophages with CD45.1 mark His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760604 anti-H3K4me1|Lung macrophages with CD45.1 mark His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760574 anti-H3K4me2|Peritoneal cavity macrophages His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760573 anti-H3K27ac|Peritoneal cavity macrophages His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760572 anti-H3K4me1|Peritoneal cavity macrophages His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760567 anti-H3K27ac|Lung macrophages His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760566 anti-H3K4me1|Lung macrophages His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760548 anti-H3K27ac|Brain microglia His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760547 anti-H3K4me1|Brain microglia His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX759803 none|small pre-B cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX759801 anti-H3S10pK14Ac|Millipore 07-081; Lot 2200929|small pre-B cells His@ H3S10phK14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX759799 anti-H3K9Ac|Millipore 06-942; Lot 2279810|small pre-B cells His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX759797 anti-Brwd1|E15, sc-83517; Lot J1508|small pre-B cells Oth@ Brwd1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX759264 Anti- H3K4me2 Millipore (Cat. No. 07-030 )|mouse primary cortical neuron His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX757617 NA|RA-treated Mutant ESC InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX757616 H3K9me2, mAbcam 1220|RA-treated Mutant ESC His@ H3K9me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX757614 NA|Mutant ESC InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX757613 H3K9me2, mAbcam 1220|Mutant ESC His@ H3K9me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX757611 NA|RA-treated WT ESC InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX757610 H3K9me2, mAbcam 1220|RA-treated WT ESC His@ H3K9me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX757608 NA|WT ESC InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX753157 Abcam, ab4729|activated B cell His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX747492 HA 12CA5|pancreatic beta cell line Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX744019 BRD4|G1E_BRD4 +GATA1 Oth@ Brd4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX744017 BRD4|G1E_BRD4 G1E Oth@ Brd4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX744015 GATA-1 Antibody (N6)|G1E_GATA1 +JQ1 Oth@ Gata1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX744013 GATA-1 Antibody (N6)|G1E_GATA1 control Oth@ Gata1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX738259 Rabbit polyclonal anti-RUNX1 (non-commercial antibody)|EML cells Oth@ Runx1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX738257 Rabbit Serum IgG (Sigma I5006)|EML cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX736461 Sox2 clone 6F1.2 EMD Millipore Cat# 17-656|iMOP cells Oth@ Sox2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX736459 c-Myc (N-262) Santa Cruz Cat# sc-764|iMOP cells Oth@ Myc 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX736457 RNA polymerase II clone 4H8 (Abcam Cat#ab5408)|iMOP cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX734393 H3K27ac (Abcam 4729)|MLL-AF9-puro transformed murine leukemia cell line His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX727205 Pol II Antibody (H-224)|anti-Pol II immunoprecipitated chromatin fragments|Adelman_Bl6_macrophage_RNAPolII_ChIP-seq_2hr_LPS Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX727203 Pol II Antibody (H-224)|anti-Pol II immunoprecipitated chromatin fragments|Adelman_Bl6_macrophage_RNAPolII_ChIP-seq_30min_LPS Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX727201 Pol II Antibody (H-224)|anti-Pol II immunoprecipitated chromatin fragments|Adelman_Bl6_macrophage_RNAPolII_ChIP-seq_untreated Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX710372 H3K27ac|G1E -ER4 cells, treated with E2 His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX710370 H3K27ac|G1E cells, an erythroid progenitor model His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708774 H3K27ac|Splenic conventional dendritic Cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708772 H3K4me1|Splenic conventional dendritic Cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708770 H3K27me3|Splenic conventional dendritic Cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708768 H3K4me3|Splenic conventional dendritic Cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708766 STAT3|Splenic conventional dendritic Cells Oth@ Stat3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708764 H3K27ac|Pre-activated CD4+ T cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708762 H3K4me1|Pre-activated CD4+ T cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708760 H3K27me3|Pre-activated CD4+ T cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708758 H3K4me3|Pre-activated CD4+ T cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX708756 STAT3|Pre-activated CD4+ T cells Oth@ Stat3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX702809 CSL(RBPSUH)|T cell acute lymphocytic leukemia Oth@ Rbpj 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX702807 Notch1 (antisera made in lab)|T cell acute lymphocytic leukemia Oth@ Notch1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX702805 T cell acute lymphocytic leukemia Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX700952 Smc1a|Anti-Smc1a (Bethyl Laboratories, catalog number A300-055A)|CD4+CD8+ double positive thymocytes Oth@ Smc1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX699774 H3K27me3 (#17-622, Millipore)|Forebrain E10.5 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX699295 H3K4me1 (abcam, catalog# ab8895, lot# GR114298-1)|Mouse back skins His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX699294 Med1 (Crsp1/Trap220, Bethyl Laboratories, catalog# A300-793A, lot# A300-793A-2)|Mouse back skins Oth@ Med1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX699293 H3K27ac (abcam, catalog# ab4729, lot# GR132150-1)|Mouse back skins His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX697788 anti-H3K4me3 (Millipore, catalog# 07-473)|differentiated cells (ESCs were subjected to Spinal motor Neuron in vitro directed differentiation) His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX697787 anti-H3K4me3 (Millipore, catalog# 07-473)|ES cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX697701 RNA polymerase II phosphoS5 antibody|Pol II ChIP-Seq Mock 60 min Cort Constant Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX697700 RNA polymerase II phosphoS5 antibody|Pol II ChIP-Seq Mock 60 min Cort Pulsed Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX697699 RNA polymerase II phosphoS5 antibody|Pol II ChIP-Seq Mock 20 min Cort Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX697698 RNA polymerase II phosphoS5 antibody|Pol II ChIP-Seq Mock 0 min Cort Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX695716 H3K4me3 (Homemade #28)|ES cell culture His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX695696 Zic2 (Abcam, ab150404)|ES cell culture Oth@ Zic2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX692060 Murine MLL-AF9 leukemic cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX691801 none|Input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX691797 Flag (SIGMA M2 F1804)|dCas9-noED + S2 gRNA Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX691795 Flag (SIGMA M2 F1804)|dCas9-noED + S1 gRNA Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX689723 CTCF Millipore #07-729|Wehi-231-TFII-I KD Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX689721 CTCF Millipore #07-729|Wehi-231-CT Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688808 N/A|Mouse e17.5 Embryonic Occipital Cortex InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688806 H3K4me2 (Millipore 07-030)|Mouse e17.5 Embryonic Occipital Cortex His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688804 H3K27ac (Abcam ab4729)|Mouse e17.5 Embryonic Occipital Cortex His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688802 N/A|Mouse e17.5 Embryonic Frontal Cortex InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688800 H3K4me2 (Millipore 07-030)|Mouse e17.5 Embryonic Frontal Cortex His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688798 H3K27ac (Abcam ab4729)|Mouse e17.5 Embryonic Frontal Cortex His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688796 N/A|Mouse e14.5 Embryonic Cortex InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688794 H3K4me2 (Millipore 07-030)|Mouse e14.5 Embryonic Cortex His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688792 H3K27ac (Abcam ab4729)|Mouse e14.5 Embryonic Cortex His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688790 N/A|Mouse e11.5 Embryonic Cortex InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688788 H3K4me2 (Millipore 07-030)|Mouse e11.5 Embryonic Cortex His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX688786 H3K27ac (Abcam ab4729)|Mouse e11.5 Embryonic Cortex His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX686942 H3K27ac (Abcam ab4729)|mouse embryonic stem cell His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX686484 Whole cell extract|v6.5 mouse embryonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX686483 RNAP2 antibody: Covance MMS-128P|v6.5 mouse embryonic stem cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX686482 H3K36me3 antibody: Abcam ab9050|v6.5 mouse embryonic stem cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX686481 H3K27ac antibody: Abcam ab4729|v6.5 mouse embryonic stem cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX686480 H3K9me3 antibody: Abcam ab8898|v6.5 mouse embryonic stem cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX686479 H3K27me3 antibody: Upstate 07-449|v6.5 mouse embryonic stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX686478 H3K4me3 antibody: Millipore 07-473|v6.5 mouse embryonic stem cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX685925 total rabbit IgG, Millipore, Cat. #12-370|whole cerebellum InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX685923 none (input)|whole cerebellum InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX684270 H3K4me3 (Active Motif, 39159, lot 1609004)|Embryonic stem cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX675964 anti-H3K4me1 (Active Motif 39287)|primary CD4+ T cells from spleen His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX675963 anti-H3k27ac (Active Motif 39133)|primary CD4+ T cells from spleen His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX675962 anti-p300 (Santa Cruz sc551X)|primary CD4+ T cells from spleen Oth@ Ep300 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX672425 H3K4me3|Abcam #ab8580|Differentiated motor neuron His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX672420 H3K27me3|Abcam #ab6002|mESC His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX672416 CTCF|Millipore #07-729|mESC Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX672290 c-Myc Antibody (N-262) (Santa Cruz, catalog# sc-764, lot# D0413)|Primary lymphoma cells Oth@ Myc 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX672289 none (input)|Primary lymphoma cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671991 H3K4me3 ChIP|H3K4me3 (Millipore 07-473, lot#2207275)|embryonic stem cells, TC11, ZNF91 plasmid, H3K4me3 ChIP His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671989 H3K4me3 ChIP|H3K4me3 (Millipore 07-473, lot#2207275)|embryonic stem cells, TC11, empty vector, H3K4me3 ChIP His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671900 H3K4me3 (Millipre #04-745)|H3f3b null testis tissue His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671899 H3K4me3 (Millipre #04-745)|H3f3b WT/WT testis tissue His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671766 RNA Pol II (Abcam, ab817)|In-vivo leukemia cells from spleen Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671765 H3K79me2 (Abcam, ab3594)|In-vivo leukemia cells from spleen His@ H3K79me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671762 H3K4me3 (Abcam, ab8580)|In-vivo leukemia cells from spleen His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671761 H3K4me2 (Abcam, ab7766)|In-vivo leukemia cells from spleen His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671760 H3K27ac (Abcam, ab4729)|In-vivo leukemia cells from spleen His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671759 H3K18ac (Abcam, ab1191)|In-vivo leukemia cells from spleen His@ H3K18ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX671668 sc46|DIV7 mCTX neurons Oth@ Junb 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX669239 Total MeCP2 antibody (Chen et al. 2003)|Cerebellum Oth@ Mecp2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX668247 cdk8|Santa Cruz SC-1521|Embryonic stem cells Oth@ Cdk8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX668237 H3K27Ac|Abcam AB4729|Mouse embryonic fibroblasts His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX668236 None|None WCE|Mouse embryonic fibroblasts InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX663359 mouse monoclonal anti-FLAG , M2 (Sigma, Cat.-No.: F1804)|limb buds Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX661587 PolII-S5p, Abcam ab5131|Patski cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX661415 RNAPII, sc-899, sc-9001, Santa Cruz|Liver tissue Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX661087 H3K4me3|1000 E6.5 epiblasts His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX657179 PolII: 7C2 RNA Pol II|R6_striatum_polII Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX657174 PolII: 7C2 RNA Pol II|WT_striatum_polII Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX657143 Med1/TRAP220|Bethyl A300-793A|Mouse embryonic fibroblasts Oth@ Med1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX648142 none|DP T cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX648141 H3K27Ac (Abcam, ab 4729)|DP T cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX647891 crosslink|anti-H3.1/2 (antiserum)|Embryonic stem cells His@ H3.1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX647889 crosslink|anti-H3.3 (antiserum)|Embryonic stem cells His@ H3.3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX645858 none (input)|Embryonic Stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX645856 H3K27me3|07-449|Embryonic Stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX645854 H3K4me3|07-473|Embryonic Stem cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX604263 ab9050, abcam|Neural progenitor cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX604261 ab8898, abcam|Neural progenitor cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX604257 ab71683, abcam|Neural progenitor cells Oth@ Suv39h2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX604255 ab12405, abcam|Neural progenitor cells Oth@ Suv39h1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX604253 1MOD-1A9-AS, euromedex|Neural progenitor cells Oth@ Cbx1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX589576 H3K4m3|KO_Retinoic acid treated ES cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX589574 H3K27me3|KO_Retinoic acid treated ES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX589572 H3K4m3|WT_Retinoic acid treated ES cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX589570 H3K27me3|WT_Retinoic acid treated ES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX589567 H3K27me3|KO_ES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX589565 H3K27me3|WT_ES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX567345 WT ES cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX564564 IgG Santa Cruz, sc-2027|Microdissected developing kidneys InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX564562 WT1 (C-19) Santa Cruz, sc-192|Microdissected developing kidneys Oth@ Wt1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX556713 none|none|input control|WEHI-279 mouse lymphoma cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX556711 SpiB|Monoclonal ANTI-FLAG M2 (F3165 SIGMA)|ChIP chromatin|WEHI-279 mouse lymphoma cells Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX556709 PU.1|Monoclonal ANTI-FLAG M2 (F3165 SIGMA)|ChIP chromatin|WEHI-279 mouse lymphoma cells Oth@ Spi1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547827 GATA6 (R&D system, AF1700, lot KWT0112101)|mouse embryonic fibroblasts Oth@ Gata6 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547824 GATA4 (R&D system, AF2606, lot VAZ0312091)|mouse embryonic fibroblasts Oth@ Gata4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547097 CTCF ((Millipore 07-729)|P12_Liver Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547095 HNF4A (Santa Cruz sc-8987 X)|P12_Liver Oth@ Hnf4a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547091 TAF3 (IGBMC)|P12_Liver Oth@ Taf3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547089 TFIIE (Santa Cruz sc-6935X)|P12_Liver Oth@ Gtf2e2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547087 TFIIB (Santa Cruz sc-225 X)|P12_Liver Oth@ Gtf2b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547085 Pol II (Santa Cruz sc-9001X)|P12_Liver Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX547083 TBP (Abcam ab28175)|P12_Liver Oth@ Tbp 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX545940 H3K9/14ac|H3K9/14ac WT P6 His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX545939 H3K4me3|H3K4me3 WT P6 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX545938 H3K27ac|H3K27ac KO P22 His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX545937 H3K27ac|H3K27ac WT P22 His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX545936 H3K9/14ac|H3K9/14ac KO P22 His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX545935 H3K9/14ac|H3K9/14ac WT P22 His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX545934 H3K4me3|H3K4me3 KO P22 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX545933 H3K4me3|H3K4me3 WT P22 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX539684 Polyclonal rabbit-anti-H3K27me3 (10 g/ChIP)|Th0.Ezh2KO.ChIP-seq His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX539682 Polyclonal rabbit-anti-H3K27me3 (10 g/ChIP)|Th0.Ezh2ff.ChIP-seq His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX535291 Santa Cruz, sc-899x|KO MEF Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX535290 Santa Cruz, sc-899x|WT MEF Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX535287 none|KO MEF InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX535258 neuronal progenitor cells, mock treatment Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX535032 H3K27me3 antibody|Immunoprecipitated DNA|Ezh2KO Epithelium His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX535030 H3K27me3 antibody|Immunoprecipitated DNA|Control Epithelium His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX534847 CHD8 N terminus|mouse E17.5 Cortex Oth@ Chd8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX527854 In house anti-H3K9me3 #4861|Mouse Embryonic Fibroblasts His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX527850 In house anti-H3K9me3 #4861|Neural precursors cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX527843 -HA (Roche 3F10) and -DYKDDDDK (Biozol)|Embryonic Stem cells Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX527841 In house anti-H3K9me3 #4861|Embryonic Stem cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX523454 None|Day 7 differentiated mouse embryonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX523453 ATRX|Day 7 differentiated mouse embryonic stem cells Oth@ Atrx 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX523450 None|Undifferentiated mouse embryonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX523449 ATRX|Undifferentiated mouse embryonic stem cells Oth@ Atrx 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX522719 ab8898|Abcam|embryonic stem cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX522717 ab8580|Abcam|embryonic stem cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX521631 input|Mouse embryonic day 11.5 (e11.5) limb InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX520229 HDAC1 (Abcam, ab7028)|embryonic stem cells Oth@ Hdac1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX520225 Arid3a Streptavidin-conjugated beads|single colony|embryonic stem cells Oth@ Arid3a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX520219 H3K4me2|3T3-L1 pre-adipocytes (4h) His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX520217 H3K4me1|3T3-L1 pre-adipocytes (4h) His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX520215 H3K27ac|3T3-L1 pre-adipocytes (4h) His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX508009 PolII phospho Ser5 (ab5095, Abcam, Cambridge, MA)|uterus Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX508007 ER (sc-542, Santa Cruz Inc, Santa Cruz CA)|uterus Oth@ Esr1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX505077 Abcam (ab8895)|primary Rag2 -/- thymocytes His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX505075 Santa Cruz (sc-350x)|primary Rag2 -/- thymocytes Oth@ Ets1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX504219 Lsd1|ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells Oth@ Kdm1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX504215 Ezh2|ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells Oth@ Ezh2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX499134 H3K4me1 (Abcam ab8895-50ug)|epiblast like cells (EpiLC) His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX499132 H3K27ac (Active Motif 39135)|epiblast like cells (EpiLC) His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX499130 Otx2 (Abcam ab21990-100ug)|epiblast like cells (EpiLC) Oth@ Otx2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX499128 Oct4 (Santa Cruz sc-8628)|epiblast like cells (EpiLC) Oth@ Pou5f1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX499126 p300 (Santa Cruz sc-585)|epiblast like cells (EpiLC) Oth@ Ep300 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX499121 H3K4me1 (Abcam ab8895-50ug)|embryonic stem cells (ESC) His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX499119 H3K27ac (Active Motif 39135)|embryonic stem cells (ESC) His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX499113 p300 (Santa Cruz sc-585)|embryonic stem cells (ESC) Oth@ Ep300 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX497493 Rabbit IgG (in house purified)|Primary proliferating myoblasts Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX497491 Rabbit anti c-Jun (sc-1694, Santa Cruz Biotechnology)|Primary proliferating myoblasts Oth@ Jun 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX497489 mouse IgG (278-010, Ancell)|Primary myotubes (24hr post differentiation induction) InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX497487 Mouse anti MyoG (sc-12732, Santa Cruz Biotechnology)|Primary myotubes (24hr post differentiation induction) Oth@ Myog 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX497483 Mouse anti MyoD (sc-32758, Santa Cruz Biotechnology)|Primary proliferating myoblasts Oth@ Myod1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX497481 Rabbit non immune serum|Primary proliferating myoblasts InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX497479 Runx1 (in house)|Primary proliferating myoblasts Oth@ Runx1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX495630 Anti-Flag, Sigma, F3165|EL4 cells Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX485444 Lab generated rabbit anti-Ptf1a|E12.5 Neural Tube Oth@ Ptf1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX485443 none (input)|E12.5 Neural Tube InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX485267 none|limb bud, hearts, branchial arches InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX485265 mouse monoclonal anti-FLAG (M2) (Sigma,F1804)|limb bud, hearts, branchial arches Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX484269 H3K27me3 antibody (Upstate 07-449)|Foxp3GFPKO (het female) His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX484267 H3K27me3 antibody (Upstate 07-449)|Foxp3GFPKO (male) His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX484265 H3K27me3 antibody (Upstate 07-449)|Tnaive His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX484263 H3K27me3 antibody (Upstate 07-449)|T effector His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX484261 H3K27me3 antibody (Upstate 07-449)|Resting Treg His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX484259 H3K27me3 antibody (Upstate 07-449)|Activated Treg His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX483613 H2A.X (Xiao lab)|embryo His@ H2A.X 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX483143 none|Py2T breast cancer cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX483141 Tead2 (affinity purified, polyclonal rabbit anti-Tead2 antibody (amino acids 16-32)|Py2T breast cancer cells Oth@ Tead2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482891 H3K27me3 (Diagenode C15410069 (pAb-069)|RING1A-/-;RING1Bfl/fl Embryonic stem cells, tamoxifen-treated, H3K27me3 ChIP His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482889 H3K27me3 (Diagenode C15410069 (pAb-069)|RING1A-/-;RING1Bfl/fl Embryonic stem cells, untreated control, H3K27me3 ChIP His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482887 EZH2 Ab (Cell Signaling #5246S)|RING1A-/-;RING1Bfl/fl Embryonic stem cells, tamoxifen-treated, EZH2 ChIP Oth@ Ezh2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482885 EZH2 Ab (Cell Signaling #5246S)|RING1A-/-;RING1Bfl/fl Embryonic stem cells, untreated control, EZH2 ChIP Oth@ Ezh2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482883 SUZ12 Ab (Cell Signaling #3737S)|RING1A-/-;RING1Bfl/fl Embryonic stem cells, tamoxifen-treated, SUZ12 ChIP Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482881 SUZ12 Ab (Cell Signaling #3737S)|RING1A-/-;RING1Bfl/fl Embryonic stem cells, untreated control, SUZ12 ChIP Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482879 RING1B ab (Atsuta et al., 2001; PMID 11289226)|RING1A-/-;RING1Bfl/fl Embryonic stem cells, tamoxifen-treated, RING1B ChIP Oth@ Rnf2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482877 RING1B ab (Atsuta et al., 2001; PMID 11289226)|RING1A-/-;RING1Bfl/fl Embryonic stem cells, untreated control, RING1B ChIP Oth@ Rnf2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX482875 none|RING1A-/-;RING1Bfl/fl Embryonic stem cells, untreated control, sonicated control InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX481626 H3K4me3|Abcam #ab8580|pro-B cell His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX481624 H3K27ac|Abcam #ab4729|pro-B cell His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX476213 ES cells_input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX476211 Anti-Zfp57 antibody|ES cells_Zfp57 ChIP-seq Oth@ Zfp57 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX473057 YAP-ERMS mouse cell line Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX471322 CAP-D3|Mouse embryonic fibroblasts Oth@ Ncapd3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX471320 none|Mouse embryonic fibroblasts InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX467367 RXR N-197|RXR_125_IDGSW3_d35 Oth@ Rxra 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX467365 RXR N-197|RXR_veh_IDGSW3_d35 Oth@ Rxra 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX467363 VDR C-20|VDR_125_IDGSW3_d35 Oth@ Vdr 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX467361 VDR C-20|VDR_Veh_IDGSW3_d35 Oth@ Vdr 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX461538 RNA Pol II|fetal liver cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX461537 H4K16Ac|fetal liver cells His@ H4K16ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX461536 H3K79me2|fetal liver cells His@ H3K79me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX461535 H3K36me3|fetal liver cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX461534 H3K27me3|fetal liver cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX461533 H3K9Ac|fetal liver cells His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX461532 H3K4me3|fetal liver cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX461531 H3K4me2|fetal liver cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX456551 Embryonic stem cell Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX450827 none|HFSC_input DNA_ChIP-Seq InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX450318 Acetylated Histone H4|BMM_LPS_0240_AcH4 His@ H4ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX450317 Acetylated Histone H4|BMM_LPS_0120_AcH4 His@ H4ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX450316 Acetylated Histone H4|BMM_LPS_0060_AcH4 His@ H4ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX450315 Acetylated Histone H4|BMM_NoStim_0000_AcH4 His@ H4ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437637 SRF (Santa Cruz Biotechnology, sc-335, Lot# I2712)|cornea Oth@ Srf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437463 Total H3 (Abcam, ab1791, Lot GR82485)|In vitro effector CD8+ T cells His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437461 H3K36me3 (Abcam, ab9050, Lot GR36719)|In vitro effector CD8+ T cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437459 H3K27me3 (Millipore, 07-449, Lot 2064519)|In vitro effector CD8+ T cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437457 H3K27ac (Abcam, ab4729, Lot GR52136)|In vitro effector CD8+ T cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437455 H3K4me3 (Abcam, ab8580, Lot GR33084)|In vitro effector CD8+ T cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437453 H3K4me1 (Abcam, ab8895, Lot GR61280)|In vitro effector CD8+ T cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437448 IRF4 (M-17) (Santa Cruz, sc-6059, Lot C2712)|In vitro effector CD8+ T cells Oth@ Irf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX437446 BATF (Brookwood Biomedical, PAB4003, Lot 004)|In vitro effector CD8+ T cells Oth@ Batf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX429087 GFP (Abcam, Cambridge, UK)|Neural Retina Oth@ GFP 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX426374 Cbx8|ES E14 mouse cells Oth@ Cbx8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX424024 H3K36me3|mouse embryonic fibroblasts His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX424022 H3K9me3|mouse embryonic fibroblasts His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX424019 Jmjd2c|mouse embryonic fibroblasts Oth@ Kdm4c 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX424008 Jmjd2c|Conditional Jmjd2c knockout ESCs Oth@ Kdm4c 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423970 H3K36me3 (Abcam, ab9050, lot# GR52625-1)|MC3T3-E1 cells differentiated for 15 days His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423969 H3K4me3 (Abcam, ab1012, lot# GR10853-1)|MC3T3-E1 cells differentiated for 15 days His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423968 H3K4me1 (Abcam, ab8895, lot# GR43807-1)|MC3T3-E1 cells differentiated for 15 days His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423967 H3K9Ac (Millipore, 06-942, lot#31636)|MC3T3-E1 cells differentiated for 15 days His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423966 H4K5Ac (Millipore, 07-327, lot# DAM1794310)|MC3T3-E1 cells differentiated for 15 days His@ H4K5ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423965 RUNX2 (Santa Cruz, M-70, sc10758, lot# D1411)|MC3T3-E1 cells differentiated for 15 days Oth@ Runx2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423964 C/EBP (Santa Cruz, C-19, sc-150, lot# F3011)|MC3T3-E1 cells differentiated for 15 days Oth@ Cebpb 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423963 RXR (Santa Cruz, N-197, sc-774, lot# G2310)|MC3T3-E1 cells differentiated for 15 days Oth@ Rxra 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423961 VDR (Santa Cruz, C-20, sc-1008, lot# A0912)|MC3T3-E1 cells differentiated for 15 days Oth@ Vdr 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423959 H3K36me3 (Abcam, ab9050, lot# GR52625-1)|MC3T3-E1 cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423958 H3K4me3 (Abcam, ab1012, lot# GR10853-1)|MC3T3-E1 cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423957 H3K4me1 (Abcam, ab8895, lot# GR43807-1)|MC3T3-E1 cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423956 H3K9Ac (Millipore, 06-942, lot#31636)|MC3T3-E1 cells His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423955 H4K5Ac (Millipore, 07-327, lot# DAM1794310)|MC3T3-E1 cells His@ H4K5ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423954 RUNX2 (Santa Cruz, M-70, sc10758, lot# D1411)|MC3T3-E1 cells Oth@ Runx2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423953 C/EBP (Santa Cruz, C-19, sc-150, lot# F3011)|MC3T3-E1 cells Oth@ Cebpb 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423952 RXR (Santa Cruz, N-197, sc-774, lot# G2310)|MC3T3-E1 cells Oth@ Rxra 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX423950 VDR (Santa Cruz, C-20, sc-1008, lot# A0912)|MC3T3-E1 cells Oth@ Vdr 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX415274 H3K27me3|naive CD4 T cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX415272 H3K27ac|naive CD4 T cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX415270 H3K4me3|naive CD4 T cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX404069 Utf1 (Abcam, ab24273)|KH2 mouse embryonic stem cells Oth@ Utf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX403484 none|mammary tissues, p13, no treatment, input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX398247 Anti-CHD4 (clone 3F2/4), Abcam AB70469, lot: GR104037-2|Pro-B cell Oth@ Chd4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX398112 NA|3134 cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX398108 CHD4|3134 cells Oth@ Chd4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX396238 NA|Embryonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX390400 none|ESC-derived endoderm InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX390399 HEB (Santa Cruz, sc-357, lot G0209)|ESC-derived endoderm Oth@ Tcf12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX390394 HEB (Santa Cruz, sc-357, lot G0209)|Embryonic stem cells Oth@ Tcf12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX389599 none, input|thymus InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388424 NULL|shKdm5b LSD1i ES cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388423 NULL|shLuc LSD1i ES cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388422 Anti-H3K4me1 antibody (Abcam; ab8895)|shKdm5b LSD1i ES cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388421 Anti-H3K4me2 antibody (Abcam; ab32356)|shKdm5b LSD1i ES cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388420 Anti-H3K4me3 antibody (Millipore; CS200580)|shKdm5b LSD1i ES cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388419 Anti-H3K4me1 antibody (Abcam; ab8895)|shLuc LSD1i ES cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388418 Anti-H3K4me2 antibody (Abcam; ab32356)|shLuc LSD1i ES cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388417 Anti-H3K4me3 antibody (Millipore; CS200580)|shLuc LSD1i ES cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388406 Anti-H3K4me2 antibody (Abcam; ab32356)|shKdm5b ES cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388405 Anti-H3K4me3 antibody (Millipore; CS200580)|shKdm5b ES cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388404 Anti-H3K4me2 antibody (Abcam; ab32356)|shLuc ES cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388403 Anti-H3K4me3 antibody (Millipore; CS200580)|shLuc ES cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388400 Anti-H3K4me1 antibody (Abcam; ab8895)|shKdm5b ES cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX387736 none (input)|Liver InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385958 Millipore, 07-146|mouse embryoid bodies His@ H2AK119Ub 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385956 Millipore, 05-678|mouse embryoid bodies His@ H2Aub 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385953 Usp16 purified antibody (Non commercial, available upon request)|mouse embryoid bodies Oth@ Usp16 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385951 Millipore, 07-146|mouse embryonic stem cell His@ H2AK119Ub 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385949 Millipore, 05-678|mouse embryonic stem cell His@ H2Aub 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385946 Usp16 purified antibody (Non commercial, available upon request)|mouse embryonic stem cell Oth@ Usp16 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385479 H3K27me3 (Cat# 07-449, Millipore, lot# JBC1873477)|CD4+ T cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385478 H3K4me3 (Cat# 07-473, Millipore, lot# 2289139)|CD4+ T cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX385475 Ascl2 mAb (clone, 7E2, Millipore, lot# 2066321)|CD4+ T cells Oth@ Ascl2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX382124 Grhl3 (custom made)|adult mouse epidermis Oth@ Grhl3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX382120 Grhl3 (custom made)|whole embryonic mouse skin Oth@ Grhl3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX381493 SUZ12 Ab (Cell Signaling #3737S)|Embryonic stem cells, tamoxifen treated, SUZ12 ChIP Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX381491 SUZ12 Ab (Cell Signaling #3737S)|Embryonic stem cells, untreated control, SUZ12 ChIP Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX380359 p400 (Bethyl, A300-541A)|mouse embryonic stem cells Oth@ Ep400 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX378545 NA|main olfactory epithelium InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX378532 Millipore, cma309|main olfactory epithelium His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX378530 Abcam, ab8895|main olfactory epithelium His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX378046 HNF4A (ab41898, Abcam, lot # GR4841-13)|colonic epithelial cells Oth@ Hnf4a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX378044 H3K27ac (Ab4729; Lot # GR28147-1)|colonic epithelial cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX377396 Input chromatin|liver InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX377394 Input chromatin|aorta InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX377392 anti mouse ER-alpha|liver Oth@ Esr1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX377390 anti mouse ER-alpha|aorta Oth@ Esr1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX373165 H3K4me3|Embryonic Stem Cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX373045 anti-POLR2B (mouse and humans), Santa Cruz Cat N. SC-67318 (H-201)|Mouse Liver Pol@ Polr2b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX368313 KANSL3 (SIGMA, HPA035018)|Neuronal progenitor cells Oth@ Kansl3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX368311 MSL2 (SIGMA, HPA003413)|Neuronal progenitor cells Oth@ Msl2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX368309 MYST1 (BETHYL, A3000992A)|Neuronal progenitor cells Oth@ Kat8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX368307 none|Neuronal progenitor cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX368305 KANSL3 (SIGMA, HPA035018)|Embryonic stem cells Oth@ Kansl3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX368303 MSL2 (SIGMA, HPA003413)|Embryonic stem cells Oth@ Msl2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX368301 MSL1 (in-house, Rabbit Polyclonal, Final Bleed)|Embryonic stem cells Oth@ Msl1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX368299 MYST1 (BETHYL, A3000992A)|Embryonic stem cells Oth@ Kat8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX366998 H2AZ|Embryonic fibroblasts His@ H2A.Z 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX366996 Input|Embryonic fibroblasts InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX365685 H3K4me2 (Millipore 07-030)|Intestinal crypt enterocyte progenitors His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX365683 H3K4me2 (Millipore 07-030)|Intestinal crypt secretory progenitors His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX360389 Monoclonal ANTI-FLAG M2 Antibody, Sigma|C2C12 myotubes, IP flag PGC-1alpha Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX358244 rIgG (sc-2027, SantaCruz)|rIgG InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX358242 AR (Sahu et al. 2011)|AR_SPARKI Oth@ Ar 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX358240 AR (Sahu et al. 2011)|AR_wt Oth@ Ar 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX355581 Med1|cell line Oth@ Med1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX355580 Klf4|cell line Oth@ Klf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX355579 Oct4|cell line Oth@ Pou5f1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353852 E36 Ebs cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353850 E36 Ebs cells EED KO Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353842 E14 ES cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353823 H3K27ac (Abcam, catalog# ab4729, lot# GR45851-1)|embryonic fibroblasts, E13.5 His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353821 H3K4me1 (Abcam, catalog# ab8895, lot# GR46388-1)|embryonic fibroblasts, E13.5 His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353819 H3K4me3 (Active Motif, catalog# 39159, lot# 1609004)|embryonic fibroblasts, E13.5 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353817 c-Myc N262 (Santa Cruz , catalog# sc764, lot#G0111)|embryonic fibroblasts, E13.5 Oth@ Myc 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353814 RNAPII (Santa Cruz, catalog# sc-899, lot# F0112)|embryonic fibroblasts, E13.5 Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353407 STAT6 (Santa Cruz, M-20, sc-981)|Th9 cells, 72h, STAT6 ChIP Oth@ Stat6 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353405 STAT5B (R&D Systems, Sta5B)|Th9 cells, 72h, STAT5B ChIP Oth@ Stat5b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX353403 BCL6 (Santa Cruz, N-3, sc-858)|Th9 cells, 72h, BCL6 ChIP Oth@ Bcl6 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX348406 Anti-PU.1 (in-house rabbit polyclonal against the N-Terminal (aa. 1-100))|In vitro reconstituted chromatin (genomic DNA from primary bone marrow-derived macrophages) Oth@ Spi1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX346169 anti-pol II CTD (abcam ab5095)|whole heart Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344648 None|Input chromatin|Trophoblast giant cells - cultured InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344646 H3K27me3 (ActiveMotif, 39535, lot 33310009)|Trophoblast giant cells - cultured His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344644 H3K4me1 (Abcam, ab8895, lot 962583)|Trophoblast giant cells - cultured His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344642 H3K9me3 (Abcam, ab8898, lot GR110001)|Trophoblast giant cells - cultured His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344640 H3K4me3 (ActiveMotif, 39159, lot 1609004)|Trophoblast giant cells - cultured His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344638 H3K27ac (Abcam, ab4729, lot 730178)|Trophoblast giant cells - cultured His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX343096 Histone H4|calvaria His@ H4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX341758 na|intestinal epithelial cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX341046 H3K4me2|mouse brown preadipocytes, MLL4 KO, H3K4me2 ChIP His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX341044 H3K4me2|mouse brown preadipocytes, WT, H3K4me2 ChIP His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX341032 Pol II|mouse brown preadipocytes, MLL4 KO, Pol II ChIP Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX341031 Pol II|mouse brown preadipocytes, WT, Pol II ChIP Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX341028 PPARgamma|mouse brown preadipocytes, WT, PPARgamma ChIP Oth@ Pparg 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX341026 C/EBPbeta|mouse brown preadipocytes, WT, C/EBPbeta ChIP Oth@ Cebpb 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX341024 C/EBPalpha|mouse brown preadipocytes, WT, C/EBPalpha ChIP Oth@ Cebpa 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX338033 Monoclonal anti-H3K4me1|Splenic NK cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX335063 anti-Jmjd3 (rabbit polyclonal)|Embryonic stem cells Oth@ Kdm6b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX335061 anti-UTX (Ab84190)|Embryonic stem cells Oth@ Kdm6a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX335059 anti-Hira (WC15/WC119)|Embryonic stem cells Oth@ Hira 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX330674 SUZ12|Cell signaling, cat# 3737|E14 Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX330670 H3K27me3|Millipore #07-449|E14 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX330636 Klf4 (SC-20691, Santa Cruz)|Normal murine mammary epithelial (NMuMG) cells Oth@ Klf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX330330 none|3T3-L1 adipocytes (Day 7) InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX330328 anti-CBP (sc-369; Santa Cruz)|3T3-L1 adipocytes (Day 7) Oth@ Crebbp 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX330322 anti-C/EBP (sc-61; Santa Cruz)|3T3-L1 adipocytes (Day 7) Oth@ Cebpa 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX330320 anti-MED1 (sc-8998; Santa Cruz)|3T3-L1 adipocytes (Day 7) Oth@ Med1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX328694 H3K4me1 (ab8895, Abcam)|C2C12 His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX328691 MyoD (C-20, Santa Cruz)|C2C12 Oth@ Myod1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX328595 none|Undifferentiated mouse embryonic stem cell line InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX327163 Input|Pancreatic acinar cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX327161 H3K4Me3 (cat#04-745 Millipore)|Pancreatic acinar cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX326474 (rb) -H3K4me1 (#524; Ali Shilatifard)|ES cell culture His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX326428 none, input control|Forelimb InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX323561 Ascl1 (ab74065)|embryonic fibroblasts treated with BAM factors Oth@ Ascl1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX323416 Cebpa: Santa Cruz 14-AA|GMP_CebpaWT Oth@ Cebpa 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX320065 input DNA|CD4+ CD8+ Double Positive Thymocytes InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX319957 Nanog (A300-397A), Bethyl Laboratories|Jmjd2b KD mESCs Oth@ Nanog 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX319893 H3K27ac (Abcam ab4729)|Primary thioglycollate-elicited peritoneal macrophages His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX319883 C/EBPa (Santa Cruz sc-61)|Primary thioglycollate-elicited peritoneal macrophages Oth@ Cebpa 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX319870 RNA polymerase II CTD phsophoSerine 2 (Abcam 5095)|Primary thioglycollate-elicited peritoneal macrophages Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX319556 bioDax1 ChIP DNA from ES cells Oth@ Nr0b1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX319550 bioMyc ChIP DNA from ES cells Oth@ Myc 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX318583 Input control|Splenic CD4+ dendritic cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX318581 Runx3poly clonal home made|Splenic CD4+ dendritic cells Oth@ Runx3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX318531 normal rabbit IgG|liver tissue InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317890 H3K27me3|Cell Signaling Technologies #9773|pro-B cell His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317691 H3K27me3 (Active, Motif, lot AM)|ES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317689 H3K9me3 (Abcam, Ab8898, lot GR88132-1)|ES cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317684 H3K27me3 (Active, Motif, lot 39155)|ES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317678 H3K27Me3 (Active, Motif, lot 39155)|ES cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317677 H3K27Ac (Active, Motif, lot 39133)|ES cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317669 H3K9me3 (Abcam, Ab8898, lot 699671)|ES cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317647 H2BK5Ac|mouse plasmacytoma PCT4961 His@ H2BK5ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317646 H3K9Ac|mouse plasmacytoma PCT4961 His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317645 H3K27Ac|mouse plasmacytoma PCT4961 His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317644 H3K4me3|mouse plasmacytoma PCT4961 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317643 H4K91Ac|mouse plasmacytoma PCT4961 His@ H4K91ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317642 H3K36me2|mouse plasmacytoma PCT4961 His@ H3K36me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317641 H2AZ|mouse plasmacytoma PCT4961 His@ H2A.Z 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317640 H4K8Ac|mouse plasmacytoma PCT4961 His@ H4K8ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317639 H2BK120Ac|mouse plasmacytoma PCT4961 His@ H2BK120ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317637 H4K8Ac|mouse, in vitro activated B cells His@ H4K8ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317636 H2AZ|mouse, in vitro activated B cells His@ H2A.Z 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317634 H3K36me2|mouse, in vitro activated B cells His@ H3K36me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX316695 in house antibody|Embryonic stem cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX316675 anti-PU.1 (Santa Cruz; sc-352)|purified primary B cells from Bi-8i mice; stimulated for 1 Days; anti-PU.1 ChIP Oth@ Spi1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX316317 normal mouse IgG|Prdm4-EGFP_ESCs_B6_mIgG_ChIP InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX316315 normal mouse IgG|Prdm4-EGFP_ESCs_B1_mIgG_ChIP InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX316313 GFP (clone 3E6) Mouse IgG2a, Monoclonal Antibody|Prdm4-EGFP_ESCs_B6_GFP_ChIP Oth@ GFP 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX316311 GFP (clone 3E6) Mouse IgG2a, Monoclonal Antibody|Prdm4-EGFP_ESCs_B1_GFP_ChIP Oth@ GFP 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX315273 No Antibody|Neural progenitor cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX315201 anti-H3K27me3 (Cell Signaling 9733 (C36B11) rabbit monoclonal antibody)|Embryonic stem cell culture His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX314742 S2 PolII, (ab5095, Abcam)|Embryonic Stem Cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX312228 Dynabeads MyOneTM Streptavidin T1|ESC E14 Oth@ Biotin 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX310333 rabbit anti-SUZ12 (Cell signaling)|Mouse embryotic stem cells Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX310331 rabbit anti-RNF2/Ring1B (NAST; antigen sequence: NASTHSNQEAGPSNKRTKT)|Mouse embryotic stem cells Oth@ Rnf2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX310329 rabbit anti-REST (Millipore, 07-579)|Mouse embryotic stem cells Oth@ Rest 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX310327 rabbit anti-H3K27Me3 (Cell Signalling, C36B11)|Mouse embryotic stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX310325 rabbit anti-Jarid2 (Novus Biologicals)|Mouse embryotic stem cells Oth@ Jarid2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX310323 Rabbit IgG (DAKO)|Mouse embryotic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX309668 H2AK119ubq (05-678)|CD43 negative mouse resting B cells His@ H2AK119ub 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX309666 H3S28ph|CD43 negative mouse resting B cells His@ H3S28ph 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX306733 none (input)|Fetal Liver InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX306728 HA (Santa Cruz Biotechnology, sc-7329X, F-7)|Fetal Liver Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX306589 anti H3K27me3 antibody (Cell Signaling #9733)|HSC in vitro expanded bone marrow cells transduced with Nup98-HoxB4 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX306587 anti H3K4me3 antibody (Abcam ab8580)|HSC in vitro expanded bone marrow cells transduced with Nup98-HoxB4 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305943 None (Whole cell extract)|CM stage cultures, Whole cell extract InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305941 None (Whole cell extract)|CP stage cultures, Whole cell extract InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305939 None (Whole cell extract)|MES stage cultures, Whole cell extract InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305937 None (Whole cell extract)|ESC stage cultures, Whole cell extract InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305935 RNA Polymerase II (phospho S5) (Abcam ab5131)|CM stage cultures, RNA Polymerase II Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305933 RNA Polymerase II (phospho S5) (Abcam ab5131)|CP stage cultures, RNA Polymerase II Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305931 RNA Polymerase II (phospho S5) (Abcam ab5131)|MES stage cultures, RNA Polymerase II Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305928 H3K4me3 (Millipore 07-473)|CM stage cultures, H3K4me3 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305926 H3K4me3 (Millipore 07-473)|CP stage cultures, H3K4me3 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305924 H3K4me3 (Millipore 07-473)|MES stage cultures, H3K4me3 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305916 H3K27me3 (Millipore 07-449)|CP stage cultures, H3K27me3 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305911 H3K27me3 (Millipore 07-449)|ESC stage cultures, H3K27me3 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305909 H3K27ac (Abcam ab4729)|CM stage cultures, H3K27ac His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305907 H3K27ac (Abcam ab4729)|CP stage cultures, H3K27ac His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305905 H3K27ac (Abcam ab4729)|MES stage cultures, H3K27ac His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305903 H3K27ac (Abcam ab4729)|ESC stage cultures, H3K27ac His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX305004 H3K9me3 (Abcam, 8898, lot 699671)|mouse embryonic stem cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX304979 H3K9me3 (Diagenode. Cat no. pAb-056-050, Lot# A93-0041)|mouse embryonic stem cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX301463 anti-mouse POLR3GL ZCH10079-1434 Ab, raised against peptide RPPKSTDDKEETIQK|Hepa 1-6 cells Pol@ Polr3gl 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX301461 anti-mouse POLR3G ZCH10075-1430 Ab, raised against peptide VGFSRGEKLPDVVLK|Hepa 1-6 cells Pol@ Polr3g 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX301459 anti-POLR3D (mouse and human) CS681 Ab, raised against peptide CSPDFESLLDHKHR {Chong, 2001 #96}|Hepa 1-6 cells Pol@ Polr3d 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX301456 anti-mouse POLR3GL ZCH10079-1434 Ab, raised against peptide RPPKSTDDKEETIQK|Liver Pol@ Polr3gl 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX301454 anti-mouse POLR3G ZCH10075-1430 Ab, raised against peptide VGFSRGEKLPDVVLK|Liver Pol@ Polr3g 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX301452 anti-POLR3D (mouse and human) CS681 Ab, raised against peptide CSPDFESLLDHKHR {Chong, 2001 #96}|Liver Pol@ Polr3d 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX288138 none|Primary CD4+ Th cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX287023 Goat anti-Foxa2 (Santa cruz;Hnf3b M-20 #6554)|E17.5 Pancreas Oth@ Foxa2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX287021 Lab generated rabbit anti-Rbpjl (AN2165/2166)|E17.5 Pancreas Oth@ Rbpjl 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX287019 Lab generated rabbit anti-Rbpj(Tx857)|E12.5 Neural Tube Oth@ Rbpj 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX287017 Lab generated rabbit anti-Ptf1a (AN255/256)|E17.5 Pancreas Oth@ Ptf1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX287015 Lab generated rabbit anti-Ptf1a (AN255/256)|E12.5 Neural Tube Oth@ Ptf1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX286701 Mouse embryonic stem cells (E14) Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX286494 H3K36me3 (Abcam 9050)|hindlimb muscles His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX286413 rIgG (sc-2027, SantaCruz)|rIgG1 InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX286404 AR (Sahu et al. 2011)|AR_Cast1 Oth@ Ar 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX286401 AP2a (ab52222, Abcam)|AP2a_Cast+T Oth@ Tfap2a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX286399 HNF4a (ab41898, Abcam)|Hnf4a_Cast+T Oth@ Hnf4a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX285627 Rabbit anti-Ctcf antibody (07-729, Millipore, unpurified)|Pro-B cell Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX278533 Cebpa: Santa Cruz 14-AA|Haematopoietic progenitor cells Oth@ Cebpa 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX277332 anti-IgG|Murine erythroleukemia (MEL) cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX272973 H3K4me3 (07-473, Millipore), lot# DAM1798683|spleen His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX272031 H3K27me3 (Millipore, Cat. No. 07-449, Lot No. DAM1588246)|Embryonic cortex His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX270570 EGR2 (PRB-236P,Covance)|CD4+ T cells_treatment with immobilized anti-CD3 mAb_Egr2_IP Oth@ Egr2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX268248 cocktail of Ab-10 from Labvision and sc-543 from Santa Cruz|7438 cells Oth@ Esr1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX266510 T6719; Institute of Immunology, Kyoto ; lot: 901119|T29 cells Oth@ Rbpj 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX266508 none|T29 cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX264595 anti-PU.1 (Santa Cruz, SC-352)|RAW macrophages Oth@ Spi1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX264593 anti-H3K4me1 (Abcam, 8895)|RAW macrophages His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX264591 anti-H3K9ac (Millipore, 07-352)|RAW macrophages His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262851 input control|F9_RBPJ_input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262849 anti-RBPJ antibody (custom-made)|F9_RBPJ_ChIP-seq Oth@ Rbpj 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262222 YY1|C2C12 myoblasts Oth@ Yy1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX256792 H3K27me3|NMuMG cells, TGF, day 20 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX256790 H3K27me3|NMuMG cells, TGF, day 10 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX256788 H3K27me3|NMuMG cells, TGF, day 7 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX256786 H3K27me3|NMuMG cells, TGF, day 4 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX256784 H3K27me3|NMuMG cells, TGF, day 1 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX256782 H3K27me3|NMuMG cells, TGF, day 0 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX218291 CTCF (Millipore ref: 07-729 lot: DAM1772428)|CD43- B cells extracted from spleen Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX218290 Rabbit IgG (Bethyl, ref: P120-101 lot: P120-101-8)|CD43- B cells extracted from spleen InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX218289 Smc3 (Abcam ref: ab9263 lot: GR81379-1)|CD43- B cells extracted from spleen Oth@ Smc3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX218288 Smc1 (Bethyl ref: A300-055A lot: A300-055A-3)|CD43- B cells extracted from spleen Oth@ Smc1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX218274 Streptavidin|mouse embryonic stem cells Oth@ Biotin 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX217736 Anti-PolII N20 (Santa Cruz, sc-899)|cultured cortical neurons Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX217131 Brdu|GE Healthcare, RPN-202 and BD Biosciences, 347580|Splenic B Cells Oth@ BrdU 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX217114 gH2AX|Millipore, 05-636|Splenic B Cells His@ H2A.XS139ph 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX214086 none|none|KH2 ES cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX214077 Sox17|V5|KH2 ES cells Oth@ Sox17 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX213764 Polymerase II antibody|polII ChIP-seq Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX213763 Wdr5 antibody|wdr5 ChIP-seq Oth@ Wdr5 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX213762 PHF20 antibody|phf20 ChIP-seq Oth@ Phf20 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX213761 control sample Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX213401 Histone H3 dimethyl Lys9|mammary gland His@ H3K9me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209938 S17S anti-Erf rabbit polyclonal antibody|Mouse Embryonic Fibroblasts Oth@ Erf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209796 none|HfSCs_input DNA InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209681 none|Mammary glands of 10-week-old wildtype mice treated with E+EP6h, input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209679 anti-PR (Santa Cruz, sc-7208)|Mammary glands of 10-week-old wildtype mice treated with E+EP6h, PR ChIP Oth@ Pgr 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209340 H3|Day2 differentiating rtta ESCs, H3 ChIP His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209339 H3K27Ac|Day2 differentiating rtta ESCs, H3K27Ac ChIP His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209335 H3|Day2 differentiating Teto-Brn2 ESCs, H3 ChIP His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209330 none|Day2 differentiating rtta ESCs, WCE InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209329 Sox2|Day2 differentiating rtta ESCs, Sox2 ChIP Oth@ Sox2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209328 Brn2|Day2 differentiating rtta ESCs, Brn2 ChIP Oth@ Pou3f2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209327 none|Day2 differentiating Teto-Brn2 ESCs, WCE InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209326 Sox2|Day2 differentiating Teto-Brn2 ESCs, Sox2 ChIP Oth@ Sox2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209325 Brn2|Day2 differentiating Teto-Brn2 ESCs, Brn2 ChIP Oth@ Pou3f2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209318 none|Embryonic stem cells, WCE InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209314 Sox2|ES-derived neural progenitor cells, Sox2 ChIP Oth@ Sox2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209312 Brn2|ES-derived neural progenitor cells, Brn2 ChIP Oth@ Pou3f2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208065 mouse ES cells, shMLL4, H3K4me3 ChIP His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208061 mouse ES cells, shH2A.Z, Oct4-ChIP Oth@ Pou5f1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208060 mouse ES cells, shH2A.Z, Suz12 ChIP Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208059 mouse ES cells, shH2A.Z, RbBP5 ChIP Oth@ Rbbp5 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208058 mouse ES cells, shH2A.Z, H3K27me3 ChIP His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208057 mouse ES cells, shH2A.Z, H3K4me3 ChIP His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208054 mouse ES cells, shluc control, Oct4-ChIP Oth@ Pou5f1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208053 mouse ES cells, shluc control, Suz12 ChIP Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208052 mouse ES cells, shluc control, RbBP5 ChIP Oth@ Rbbp5 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX208051 mouse ES cells, shluc control, H3K27me3 ChIP His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX207548 Millipore 07-449|Round spermatids His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX207546 Millipore 17-614|Round spermatids His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX207536 Van Der Heijden et al. Nature Genetics, 2007, pubmed ID:17237782|Sperm Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX206483 HDAC3 (Abcam, catalog# 7030)|Liver tissue Oth@ Hdac3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX206423 Rabbit IgG- ab37415|Embryonic stem cells (E14) InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX206367 Med1/TRAP220 (Bethyl, Catalog No.A300-793A)|ZHBTc4 ES cells Oth@ Med1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205989 None|primary pre-B cell InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205987 Rabbit anti-C-terminal Ikaros from Stephen Smale Lab|primary pre-B cell Oth@ Ikzf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204660 none|Reconstitute Flag tag MEF cell InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204653 none|iPS cell from B cell InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204641 H2A.X|MEF cell His@ H2A.X 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204632 H2A.X|iPS cell from TTF cell His@ H2A.X 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204631 H2A.X|iPS cell from PF cell His@ H2A.X 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204598 anti-RAD51(H-92) Santa Cruz sc-8349, lot#H1810|Primary B cells Oth@ Rad51 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204338 Smc1a (Bethyl, Cat. No. A300-055A, Lot No. A300-055A-3)|Limb bud Oth@ Smc1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204148 None|Trophoblast stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204145 Elf5 (Santa Cruz, sc-9645x, lot D2109)|Trophoblast stem cells Oth@ Elf5 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204143 Eomes (Abcam, ab23345-100, lot 798757)|Trophoblast stem cells Oth@ Eomes 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204141 H3K27me3 (ActiveMotif, 39535, lot 33310009)|Trophoblast stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204138 H3K9me3 (Abcam, ab8898, lot GR110001)|Trophoblast stem cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX204135 H3K27ac (Abcam, ab4729, lot 730178)|Trophoblast stem cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX203386 anti-H3gen (Ab1791)|Embryonic stem cells His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX203382 anti-H3K27ac (Ab4729)|Embryonic stem cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX203380 anti-H3K27me3 (Millipore 07-449)|Embryonic stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX203378 anti-H3K4me3 (AM39159)|Embryonic stem cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX202998 Tronolab, rabbit polyclonal SY 3267-68 Oth@ Trim28 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX202994 H3K27ac (Abcam: ab4729) His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX202990 H3K9me3 (Abcam: ab8898) His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX199986 Rag1 -/- pro-B cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX197294 anti-H3K4me1|Primary bone marrow-derived macrophages, IL4 for 24hrs, H3K4me1 ChIP His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX197293 anti-H3K4me1|Primary bone marrow-derived macrophages, IFNg for 24hrs, H3K4me1 ChIP His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX197291 anti-Stat1|Primary bone marrow-derived macrophages, no treatment, Stat1 ChIP Oth@ Stat1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX197258 anti-H3K27ac|Primary bone marrow-derived macrophages, IFNg for 4hrs, H3K27ac ChIP His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX197254 anti-PU.1 (rabbit polyclonal against the N-terminus (aa. 1-100))|Primary bone marrow-derived macrophages, IFNg for 4hrs, PU.1 ChIP Oth@ Spi1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX197250 anti-H3K4me1|Primary bone marrow-derived macrophages, IFNg for 4hrs, H3K4me1 ChIP His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX197234 anti-PU.1 (rabbit polyclonal against the N-terminus (aa. 1-100))|Primary bone marrow-derived macrophages, IL4 for 4hrs, PU.1 ChIP Oth@ Spi1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX195366 rabbit anti-CTCF|mouse embryonic fibroblasts Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX195358 none|embryonic hindlimb InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX195357 Pitx1 (Santa Cruz, sc-18922, lot # G0105 )|embryonic hindlimb Oth@ Pitx1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX195323 IgG; Abcam, #46540|IgG_ChIPSeq InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX195322 Phf19 - OpenBiosystems, costum made|Phf19_ChIPSeq Oth@ Phf19 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX193438 S2ph pol2 (Abcam, ab5095)|S2ph pol2_ChIPSeq Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX193436 S5ph pol2 (Abcam, ab5131)|S5ph pol2_ChIPSeq Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX193434 H3K36me3 (Abcam, ab9050)|H3K36me3_ChIPSeq His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX189754 H3K27me3 (Cell Signaling, D18C8)|E8.5 head His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX189753 H3K4me3 (Cell Signaling, C42D8)|E8.5 head His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX188831 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|ES-E14 InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX188828 GATA-1|GATA-1|GATA-1 is a transcriptional activator which probably serves as a general switch factor for erythroid development. It binds to DNA sites with the consensus sequence ATGATAAG} within regulatory regions of globin genes and of other genes expressed in erythroid cells.|Anti-GATA-1 rabbit polyclonal antibody was generated by using a purified GST fusion to amino acids 1-89 of mouse GATA-1. Antibody Target: GATA1|MEL Oth@ Gata1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX188826 MafK_(ab50322)|ab50322|NFE2 DNA-binding activity consists of a heterodimer containing an 18-kD Maf protein (MafF, MafG, or MafK) and p45. Both subunits are members of the activator protein-1 superfamily of basic leucine zipper (bZIP)proteins. Since they lack a putative transactivation domain, small Mafs behave as transcriptional repressors when they dimerize among themselves. They serve as transcriptional activators by dimerizing with other (usually larger) bZip proteins and recruiting them to specific DNA-binding sites.|Rabbit polyclonal. Raised against synthetic peptide: TTNPKPNKALKVKKEA conjugated to KLH by a C-terminal Cysteine residue linker, corresponding to amino acids 2-17 of Human MAFK. Antibody Target: MafK|MEL Oth@ Mafk 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX188805 USF2|ab60931|Encodes a member of the basic helix-loop-helix leucine zipper family. The encoded protein can activate transcription through pyrimidine-rich initiator (Inr) elements and E-box motifs (5'-CACGTG-3').|Mouse monoclonal. Immunogen corresponds to amino acids 1-101 of Human USF2. Antibody Target: USF2|MEL Oth@ Usf2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX188804 CTCF_(SC-15914)|sc-15914|Transcriptional regulator with 11 highly conserved zinc finger domains. Depending on context, can bind a histone acetyltransferase (HAT)-containing complex and function as transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as transcriptional repressor. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation. Can dimerize, mediating long-range chromatin looping. When bound to chromatin, provides an anchor point for nucleosomes positioning. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites.|Goat polyclonal, epitope mapping near the C-terminus of CTCF of human origin. Antibody Target: CTCF|MEL Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187516 histone H3K4me3|Mammary tissues His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187515 RNA polymerase II|Mammary tissues Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187514 STAT5B|Mammary tissues Oth@ Stat5b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187513 STAT5A|Mammary tissues Oth@ Stat5a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187264 Stat3|Th17 in vitro Oth@ Stat3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187247 p300|Th0 in vitro Oth@ Ep300 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187225 Hif1a|Th17 in vitro Oth@ Hif1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187215 Fosl2|Th17 in vitro Oth@ Fosl2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187212 Etv6|Th17 in vitro Oth@ Etv6 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187210 CTCF|Th17 in vitro Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187208 CTCF|Th0 in vitro Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187190 B-ATF|Th0 in vitro Oth@ Batf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX186794 H3K9me3|ab8898|Histone H3 (tri methyl K9). Is associated with repressive heterochromatic state (silenced chromatin). NOTE CONTRAST to H3K9me1 which is associated with active and accessible regions.|rabbit polyclonal, ChIP grade. Antibody Target: H3K9me3|MEL His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX186793 H3K4me3|ab8580; 07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|MEL His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX186789 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|ES-E14 His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185885 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Placenta InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185884 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|BMDM InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185883 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|OlfactBulb InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185882 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Thymus InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185881 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Testis InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185880 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Limb InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185879 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|BAT InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185861 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Liver His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185858 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Heart His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185840 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|CH12 His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185819 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|WholeBrain InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX185801 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|SmIntestine InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX183978 CTCF (Pugacheva et. al. 2005 Hum Mol Genet 14, 953-965)|F1 C/B trophoblast stem cells Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX183340 H3K27me3|conditional KO Rb MEF His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX183339 H3K9me3|conditional KO Rb MEF His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX183338 H3K4me3|conditional KO Rb MEF His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX183337 H3Ac|conditional KO Rb MEF His@ H3ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX183330 Rb 4.1|conditional KO Rb MEF Oth@ Rb1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX181865 none|Gr1dim Mac1+ granulocytic progenitor cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX181862 H3K27ac|Gr1dim Mac1+ granulocytic progenitor cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX181860 H3K4me1|Gr1dim Mac1+ granulocytic progenitor cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX180163 H3 K9Ac|differentiating murine hematopoietic cells His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX180161 SCL|differentiating murine hematopoietic cells Oth@ Tal1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX180158 FLI1-1|differentiating murine hematopoietic cells Oth@ Fli1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX180156 Anti-HA|differentiating murine hematopoietic cells Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX178468 None|progenitor B InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX176652 H3|Abcam/No 1791/GR50122-1|E36 ES cells His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX175894 Anti-GFP (Abcam:Ab290)|ES cells Oth@ GFP 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX174587 None|Input DNA InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172947 rabbit igg|fresh Six2-expressing cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172945 none (input control)|fresh Six2-expressing cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172943 none (input control)|BIO-treated Six2-expressing cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172939 beta-catenin|BIO-treated Six2-expressing cells Oth@ Ctnnb1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172849 Pol II : Santa-Cruz (Sc9001)|liver Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172568 streptavidin beads|Invitrogen 656-01 Dynabeads MyOne? Streptavidin T1|Embryonic Stem Cell Oth@ Biotin 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172333 STAT3 (Invitrogen, 13-7000)|CD4+ T Cells Oth@ Stat3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172329 IRF8 (from Keiko Ozato, not commercial available)|CD4+ T Cells Oth@ Irf8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172324 IRF4 (Santa Cruz, sc-6059)|B cells Oth@ Irf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160821 H3K4me3 (Active Motif, catNo:39159, Lot: 01609004)|E36 ES cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160819 H3K4me1 (Abcam, catNo:8895, Lot: 962543)|E36 ES cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160817 H3K27me1 (Active Motif, cat No:61015, Lot: 08711001)|E36 ES cells His@ H3K27me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160813 none|E36 ES cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160775 H3K27 trimethyl (Millipore 07-449)|ESCs His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160774 H3K4 trimethyl (Millipore 07-473)|ESCs His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160770 H3K27 trimethyl (Millipore 07-449)|RA-treated ESCs His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160768 H3K4 trimethyl (Millipore 07-473)|RA-treated ESCs His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160498 anti-H3K27me3 (Abcam, ab6002)|motor neurons (Day 5) His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160495 anti-V5 (Abcam, ab15828)|progenitor motor neurons (Day 4) Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX159137 ZNF143, rabbit polyclonal raised against a C-terminal epitope of ZNF143 (Myslinski et al JBC 2006)|Mouse embryonic fibroblast cell line Oth@ Zfp143 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX155451 Growing C1C12 myoblasts Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX155449 c-Jun, SantaCruz: sc-1694x|Growing C1C12 myoblasts Oth@ Jun 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX155115 H3K27me3 (07-449, Upstate)|Th1 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX155113 H3K4me1 (ab8895, Abcam)|Th1 His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX155021 Santa Cruz SC-2025|Quiescent B cells, lipopolysaccharide (LPS) and 10058-F4 treatments for 4hrs InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX155018 Clontech, 632460|Quiescent B cells, lipopolysaccharide (LPS) treatment for 4hrs Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX150841 Anti-H3K4me1 (Abcam # ab8895)|Primary bone marrow-derived macrophages (BMDM) His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX149695 none|neural stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX149206 None|Input data from Wildtype B3 Cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX149204 Anti-haemagglutinin (HA) (Covance).|ChIP-Seq data from HA-Ikaros transduced B3 cells using Anti-haemagglutinin (HA) Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX149202 Rabbit anti-C-terminal Ikaros|ChIP-Seq data from Wildtype B3 Cells using Rabbit anti-C-terminal Ikaros antibody Oth@ Ikzf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX149176 H2BK20ac (ab52988, Abcam)|FACS-purified Pou5f1-GFP-positive germ cells His@ H2BK20ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX149014 H3K27me3|embryonic fibroblasts His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX149005 PolII|murine embryonic stem cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX148837 H3K27me3 Ab (gift from T.Jenuwein)|Mature B His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX148825 H3K4me2 Ab (Upstate 07-030, Lot# DAM1474881)|Mature B His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX148355 HSF-1|STHdhQ111/Q111 striatal cells Oth@ Hsf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX148354 HSF-1|STHdhQ7/Q7 striatal cells Oth@ Hsf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX147762 Fbxl10 (custom-made)|embryonic stem cells Oth@ Kdm2b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146535 none|Mouse V19-OSKM Fibroblast, Utx-/Y InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146534 H3K4me3; ChIP grade, ab8580, abcam|Mouse V19-OSKM Fibroblast, Utx-/Y His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146533 H3K27me3; ChIP grade, 07-449, Millipore|Mouse V19-OSKM Fibroblast, Utx-/Y His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146528 UTX Ab-UTX 5/1, PID 17178841|Mouse V19-OSKM Fibroblast Oth@ Kdm6a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146527 H3K4me3; ChIP grade, ab8580, abcam|Mouse V19-OSKM Fibroblast His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146526 H3K27me3; ChIP grade, 07-449, Millipore|Mouse V19-OSKM Fibroblast His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146012 H3K4me3|H3K4me3|3.2N Menin-null Embryonic Stem Cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146011 H3K4me3|H3K4me3|TC1 Embryonic Stem Cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146010 input|3.2N Menin-null Embryonic Stem Cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146009 input|TC1 Embryonic Stem Cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX145328 IRF3|primary bone marrow-derived macrophages Oth@ Irf3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX145053 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|MEL Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX144169 H3K27Ac, Abcam: Ab4729|C1C12 myotubes differentiated for 96h His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX144167 H3K27Ac, Abcam: Ab4729|Growing C1C12 myoblasts His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143855 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Spleen InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143846 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|ES-Bruce4 InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143832 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|MEF InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143831 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Lung InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143825 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Cerebellum InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143824 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Cortex InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143813 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|BoneMarrow InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143808 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Kidney InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143624 H3ac_(06-599)|06-599|missing|rabbit polyclonal antibody raised against a KLH-conjugated peptide corresponding to amino acids 1-20 of Tetrahymena histone H3 (ARTKQTARK*STGGK*APRKQLC) where K* is acetylated. Antibody Target: H3ac|C2C12 His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143618 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|C2C12 His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143617 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|C2C12 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143615 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|C2C12 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143613 H3K79me2_(ab3594)|ab3594|H3K79me2 is a mark of the transcriptional transition region - the region between the initiation marks (K4me3, etc) and the elongation marks (K36me3)|Rabbit polyclonal. Antibody Target: H3K79me2|C2C12 His@ H3K79me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143290 H3K4Me3|Mll3/ MEF His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143288 Pol2|Wild Type MEF Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143286 Mll3|Wild Type MEF Oth@ Kmt2c 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143284 H3K4Me3|Wild Type MEF His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX142531 CEBPB|sc-150|epitope mapping at the C-terminus of C/EBP-beta of rat origin|Rabbit polyclonal IgG. Antibody Target: CEBPB|C2C12 Oth@ Cebpb 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX142525 Max|sc-197|The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).|Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max|C2C12 Oth@ Max 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX142513 USF-1|sc-229|The ubiquitously expressed cellular upstream stimulatory factor (USF) consists of USF-1 and USF-2 polypeptides which independently exhibit site-specific DNA binding and are members of the c-Myc-related family of regulatory factors containing helix-loop-helix domains. USF also contains a leucine repeat that is required for efficient DNA binding. USF was originally identified as an up- stream stimulatory factor that binds the core sequence CACGTG in the adeno- virus late promoter. These findings, together with the demonstration of coop- erative interaction between USF and the initiator-binding protein, TFII-I, raises the possibility of a more general involvement of USF in transcriptional regula- tion. While expression of both USF-1 and USF-2 species is ubiquitous, different ratios of USF homo- and heterodimers are found in different cell types.|Rabbit polyclonal, USF-1 (C-20). Antibody Target: USF1|C2C12 Oth@ Usf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX142127 Mof|Embryonic stem cells Oth@ Kat8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX140398 Rad21|ab992|Synthetic peptide (Human) conjugated to KLH - which represents a portion of human Rad21 encoded within exon 14|Rabbit polyclonal. Antibody Target: RAD21|MEL Oth@ Rad21 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX140340 anti-RBP-J 1F1 rat monoclonal|C2C12, DAPT 24h, RBP-J 1F1 ChIP Oth@ Rbpj 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX140339 anti-RBP-J 1F1 rat monoclonal|C2C12, Delta 24h, RBP-J 1F1 ChIP Oth@ Rbpj 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX140338 anti-RBP-J 1F1 rat monoclonal|C2C12, DAPT 6h, RBP-J 1F1 ChIP Oth@ Rbpj 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX140337 anti-RBP-J 1F1 rat monoclonal|C2C12, Delta 6h, RBP-J 1F1 ChIP Oth@ Rbpj 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX130250 anti-GFP|Whole Brain Oth@ GFP 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX130025 H3K4me3|Abcam AB8580|Chromatin IP against H3K4me3 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX130022 H2BK119ub1|Moshe Oren MOSHE OREN LABORATOR|Chromatin IP against H2Bub His@ H2BK119ub 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX129064 RNA polymerase II (ab5095, lot# GR32890-1, Abcam)|uterus Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX129062 ER alpha (sc-542, lot# D1310, Santa Cruz)|uterus Oth@ Esr1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127404 H3K4me2|HPC-iPSC H3K4me2 ChIPseq His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127402 H3K4me2|MEF-iPSC H3K4me2 ChIPseq His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127391 H3K4me3|HPC-iPSC H3K4me3 ChIPseq His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127389 H3K4me3|MEF-iPSC H3K4me3 ChIPseq His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127383 H3K27me3|APC H3K27me3 ChIPseq His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127378 H3K27me3|HPC-iPSC H3K27me3 ChIPseq His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127376 H3K27me3|MEF-iPSC H3K27me3 ChIPseq His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127370 APC input DNA InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127369 HPC input DNA InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127364 HPC-iPSC input DNA InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127362 MEF-iPSC input DNA InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX122577 Relb|bone marrow Oth@ Relb 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX122575 Rel|bone marrow Oth@ Rel 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX121228 anti-Suz12|Suz12 ChIP in RESTko NP cells Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX121226 anti-Suz12|Suz12 ChIP in wildtype NP cells Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX121186 anti-Nkx3.1 (Santa Cruz Biotechnology, sc-15022)|Nkx3-1_HET_ChIP-Seq Oth@ Nkx3-1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX121184 anti-Nkx3.1 (Santa Cruz Biotechnology, sc-15022)|Nkx3-1_WT_ChIP-Seq Oth@ Nkx3-1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX120207 anti EBF1 #0647 homemade|FO B Oth@ Ebf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX120205 anti EBF1 #0647 homemade|Pro-B Oth@ Ebf1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX120173 SA1|Chromatin IP against SA1 Oth@ Stag1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX120172 SMC3|Chromatin IP against SMC3 Oth@ Smc3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX119353 anti-ATF4|Mouse embronic fibroblast Oth@ Atf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX119351 anti-CHOP|Mouse embronic fibroblast Oth@ Ddit3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX119325 HA-tag antibody (Santa Crruz Biotechnology, sc-7392)|G1ME cells Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX118393 Anti-H3K4me3 Millipore (#07-473)|Anti-H3K4me3 B6_testis_ChIP-Seq His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX118391 Anti-DMC1 (C-20)|Anti-DMC1 Prdm9-/-_testis_SSDS Oth@ Dmc1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX118389 Input DNA with Kinetic Enrichment_testis_SSDS InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX118387 Anti-DMC1 (C-20)|Anti-DMC1 F1_testis_SSDS Oth@ Dmc1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX117954 anti-YY1|Cardiac progenitor cells, YYI ChIP Oth@ Yy1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1159962 Input control|Low fat diet InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1159961 Input control|High fat diet InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1159958 rabbit H3 antibody (Abcam, ab1791)|Low fat diet His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1159957 rabbit H3 antibody (Abcam, ab1791)|High fat diet His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX115151 H3K4me3|embryonic stem cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX115149 H3K4me1|embryonic stem cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX115147 streptavidin|neuronal progenitor cells Oth@ Biotin 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX115145 streptavidin|embryonic stem cells Oth@ Biotin 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114991 none (input)|T-ALL mnase input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114987 H3K4me3|T-ALL H3K4me3 His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114985 H3K27me3|T-ALL H3K27me3 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114983 none (input)|DP mnase input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114981 H3K9ac|DP H3K9ac His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114724 PR|Mouse uterus Oth@ Pgr 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1144905 GATA3|CD4+CD25CD62L+ T cells Oth@ Gata3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX113297 GRIP1|primary bone marrow-derived macrophages Oth@ Grip1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX112907 Antibody H3K27me3 (Millipore 07-449, DAM-1588246)|Embryonic Stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX112503 Bethyl BL3194, lotA300-691A-1|CDX2 ChIP-Seq in WT mouse villus cells Oth@ Cdx2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX112184 RNAPII S5P|CTD4H8 (MMS-128P, Covance)|Undifferentiated ES cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1114460 Primary non-B cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1091123 anti-IRF8 (Santa Cruz, C-19)|LPS actived B cells Oth@ Irf8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1091121 anti-IRF4 (Santa Curz, M-17)|LPS actived B cells Oth@ Irf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1078988 H3K4me3 (Millipore, CS200580)|Mammary gland His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1062972 none|melan-Ink4a-Arf-1 (melan-a) InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1062971 SOX10 (sc-17342X; Santa Cruz Biotechnology)|melan-Ink4a-Arf-1 (melan-a) Oth@ Sox10 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1062969 H3K27me3 (ab6002; Abcam)|melan-Ink4a-Arf-1 (melan-a) His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1062966 H3K27ac (ab4729; Abcam)|melan-Ink4a-Arf-1 (melan-a) His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058356 rabbit polyclonals|ES-derived NS5 cells_ChIP Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057066 Adult Hippocampal NeuN- Cells (~7 weeks postnatal) Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057058 H3.3|Embryonic Cortical NeuN+ Cells (E16.5) His@ H3.3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1056351 H3K9me3 (Active Motif: 39161)|H3K9me3_ChIPSeq_noTam His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1054886 Normal Goat IgG (SC, catalog# 2028, lot# F1411)|Basal Ganglia and Septum InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX105267 H3K27me3|Embryonic stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104394 Rad21|Bethyl A300-080A|Embryonic stem cells Oth@ Rad21 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104389 CapG|Tatsuya Hirano AFR310-4L|Embryonic stem cells Oth@ Ncapg 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104387 CapD3|Tatsuya Hirano AFR319-3L|Embryonic stem cells Oth@ Ncapd3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104156 none|none|Mouse liver cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104154 RPB2|sc-67318|Mouse liver cells Pol@ Polr2b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104150 H3K36me3|ab9050|Mouse liver cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104148 RPC4|CS681, raised against the C-terminus of RPC4, peptide CSPDFESLLDHKHR (same peptide as CS682, see (Chong, Hu et al. 2001))|Mouse liver cells Pol@ Polr3d 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104146 RPC1|CS377, raised against the C-terminus of RPC1, peptide PKRPLIFDTNEFHIPLVT, see (Sepehri and Hernandez 1997)),|Mouse liver cells Pol@ Polr3a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035118 p1 mouse rib chondrocytes Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1029571 Ileal epithelial cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1022126 crosslink|anti-H3.3 (09-838); H3K9me3 (ab8898)|Embryonic stem cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1022089 NA|no antibody|Embryonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX101808 CBX7|Embryonic stem cells WT Oth@ Cbx7 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX101697 H3K27me3 (Millipore)|C2C12 muscle progenitor cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX101695 H3K4me3 (Abcam)|C2C12 muscle progenitor cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX101683 PolII 8WG16|C2C12 myoblasts Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1014074 anti-H3K27ac (ab4729, Abcam)|Tet2-/-: AML1-ETO_anti-H3K27ac His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1014073 anti-H3K4me3 (9751S, Cell signalling)|Tet2-/-: AML1-ETO_anti-H3K4me3 His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1014071 IgG control (Gamma-globulin (10760815, Pierce))|Tet2-/-: AML1-ETO_IgG control InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1014070 anti-H3K27ac (ab4729, Abcam)|Tet2fl/fl; AML1-ETO_anti-H3K27ac His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1014069 anti-H3K4me3 (9751S, Cell signalling)|Tet2fl/fl; AML1-ETO_anti-H3K4me3 His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1014068 anti-H3K4me1 (39635, Active Motif)|Tet2fl/fl; AML1-ETO_anti-H3K4me1 His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1014067 IgG control (Gamma-globulin (10760815, Pierce))|Tet2fl/fl; AML1-ETO_IgG control InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1008307 H3K27ac (ab4729, Abcam, Cambridge, MA, USA)|Mouse Embryonic day 14.5 Fetal Liver His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1008305 H3K4me3 (07-473, Millipore,Billerica, MA, USA)|Mouse Embryonic day 14.5 Fetal Liver His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1000539 none (Whole cell extract)|Neural stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099708 Pol II|primary myotubes Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099625 H3K36me3|Neuronal progenitor (NP) cells derived from mouse embryonic stem cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099623 H3K36me3|Embryonic Stem (ES) Cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099397 H3K36me3|ab9050|mouse Ik knockout DP thymocytes His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099396 H3K9ac2|06-599|mouse Ik knockout DP thymocytes His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099395 H3K27me3|07-449|mouse Ik knockout DP thymocytes His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099394 H3K4me3|ab8580 and 07-473|mouse Ik knockout DP thymocytes His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099262 none|input_stim_3T3 InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099261 none|input_unstim_3T3 InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099246 none|input_stim_DC InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099245 none|input_unstim_DC InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099214 SA2|Chromatin IP against SA2 Oth@ Stag2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX097687 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|MEL His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX096138 H3K4me3 Tri-Methyl-Histone H3 (Lys4) (C42D8) Rabbit mAb|embryonic stem cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX096136 Jarid1b-DAIN|embryonic stem cells Oth@ Kdm5b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX095349 Mbd3|Mbd3 ChIP Oth@ Mbd3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX093161 dimethyl-Histone H3 (Lys4)|Lin-Sca1-cKit+ cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX092603 none|Megakaryocyte Progenitor Cell Line (G1ME) InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX092476 none|EML cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX092474 anti-AML(RUNX1) rabbit polyclonal antibody|PC284|EML cells Oth@ Runx1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091662 H3K4me2 (Millipore 07-030)|ThyDP His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091660 H3K4me2 (Millipore 07-030)|ThyDN3 His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091658 H3K4me2 (Millipore 07-030)|FLDN2b His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091655 H3K4me2 (Millipore 07-030)|FLDN1 His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091653 H3K(9,14)Ac (Millipore 06-599)|ThyDP His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091651 H3K(9,14)Ac (Millipore 06-599)|ThyDN3 His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091649 H3K(9,14)Ac (Millipore 06-599)|FLDN2b His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091646 H3K(9,14)Ac (Millipore 06-599)|FLDN1 His@ H3K9K14ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX085427 anti-JNK13|Terminally differentiated neurons (TN) Oth@ Mapk8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX085110 Smc1|Bethyl A301-779A|Embryonic stem cells Oth@ Smc1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX084836 H3K4me1|Id2-HPC cells induced under myeloid conditions, H3K4me1 ChIP His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX084834 H3K4me1|Id2-HPC cells induced under B-cell conditions, Cd19+, 120h, H3K4me1 ChIP His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX084833 H3K4me1|Id2-HPC cells induced under B-cell conditions, 48h, H3K4me1 ChIP His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX084832 H3K4me1|Uninduced Id2-HPC cells, 0h, H3K4me1 ChIP His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX084805 anti-V5 (Abcam, ab15828)|Chromatin IP against V5 Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX084516 RNA Pol II|Embryonic Stem cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX083278 anti-H3K27me3|embryonic hindlimb bud, H3K27me3 ChIP His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX083276 anti-H3K27ac|embryonic hindlimb bud, H3K27ac ChIP His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX083268 anti-H3K27me3|embryonic forelimb bud, H3K27me3 ChIP His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX083266 anti-H3K27ac|embryonic forelimb bud, H3K27ac ChIP His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX081813 H3K27ac|Frontal cortex His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX081811 H3K4me3|Frontal cortex His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX080247 Pol II 8WG16 Covance (Mono)|KH2 Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX080171 anti-CTCF (SantaCruz #15914)|TKO_CTCF_ChIPseq Oth@ Ctcf 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX079890 TAL1|sc-12984|Ter119+ cells Oth@ Tal1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX079872 H3K9me3|ab8898|G1E cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX079866 H3K4me1|ab8895|G1E cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX079864 GATA2|SC-9008|G1E cells Oth@ Gata2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX079862 TAL1|sc-12984|G1E cells Oth@ Tal1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX077029 anti-Gata3 (558686, BD bioscience)|CD8 cells Oth@ Gata3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX077028 anti-Gata3 (558686, BD bioscience)|Double positive cells Oth@ Gata3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX063294 anti-H4K16Ac|E14.5 embryo head His@ H4K16ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX062985 none (Input)|None|Mouse spleen InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX062984 H3K4me3|Millipore, 05-745|Mouse spleen His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX062983 H3K4me1|Abcam, ab8895|Mouse spleen His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX062125 none|C2C12 myotubes differentiated for 96h InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX062124 none|Growing C2C12 myoblasts InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX059743 FoxA2|Control liver Oth@ Foxa2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX057745 none|ES cells, input InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX057537 PPARgamma|Preadipocyte cell line Oth@ Pparg 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX055318 1416 (Benevolenskaya et al.,Mol Cell 18, 623-635)|Kdm5a f/f ES cells Oth@ Kdm5a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX055104 anti-H3K27me3 (Upstate, 07-449)|mouse embryonic stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX047651 RNA Pol II|Preadipocyte cell line Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX047645 C/EBPdelta|Preadipocyte cell line Oth@ Cebpd 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX047143 Mi-2b|Abcam AB72418|Embyonic stem cells Oth@ Chd4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX047141 Lsd1|Abcam AB17721|Embyonic stem cells Oth@ Kdm1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX047139 HDAC2|Abcam AB7029|Embyonic stem cells Oth@ Hdac2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX047137 HDAC1|Abcam AB7028|Embyonic stem cells Oth@ Hdac1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX041306 anti-H3K27me3 (Millipore,#07-449)|Neuronal Progenitor (NP) Cells RESTko His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX041301 anti-H3K27me3 (Millipore,#07-449)|Embryonic Stem Cells (ESCs) RESTko His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX041285 STAT5B|T cell Oth@ Stat5b 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX041283 STAT5A|T cell Oth@ Stat5a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX039488 anti-H3K4me2|T-helper 2 cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX039487 anti-H3K27me3|T-helper 2 cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX039482 Fli1 (santa cruz, cat#sc356X, Lot#L0407)|CD8 cells Oth@ Fli1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX039352 Rabbit IgG|Mouse ES cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX035989 none|Doxycycline-induced MEFs InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX032490 anti-JNK13|Terminally differentiated Neurons (TN) Oth@ Mapk8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX032483 anti-NFYA|Neuronal Progenitor (NP) Cells Oth@ Nfya 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX032481 anti-JNK13|Neuronal Progenitor (NP) Cells Oth@ Mapk8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX032473 anti-NFYA|Embryonic Stem Cells (ESCs) Oth@ Nfya 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX032471 anti-JNK13|Embryonic Stem Cells (ESCs) Oth@ Mapk8 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX032464 goat-anti-eGFP, raised against His-tagged full-length eGFP and affinity-purified with GST-tagged full-length eGFP|ESC Oth@ GFP 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX029862 Tet1-N|embryonic stem cells Oth@ Tet1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX029860 Tet1-C|embryonic stem cells Oth@ Tet1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX028534 no IP|Embryonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX027464 None|Mouse Embryonic Fibroblasts with Dox-inducible Klf4, Sox2 and Oct4 (KSO) InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX027354 p300|Santa Cruz s.c. 585|Embyonic stem cells Oth@ Ep300 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX027352 none|Embyonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX027332 H3K27ac|Abcam AB4729|Embyonic stem cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX027110 Spt5|Santa Cruz Biotechnology anti-Spt5 (H300)|ActivatedBCell_Spt5 Oth@ Supt5 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX026511 H4K12ac (Millipore 07-595 Lot 1676174)|thioglycollate-elicited peritoneal macrophages His@ H4K12ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX026509 H4K8ac (Millipore 07-328 Lot 1655221)|thioglycollate-elicited peritoneal macrophages His@ H4K8ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX026507 H4K5ac (Millipore 07-327, Lot 1682153)|thioglycollate-elicited peritoneal macrophages His@ H4K5ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX026283 Suz12|Embryonic Stem cells Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX026103 anti-H3|AB1791|Embyonic stem cells His@ H3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX023715 H4K8ac|mouse B cells His@ H4K8ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX023713 H2BK5ac|mouse B cells His@ H2BK5ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX023711 H3K9ac|mouse B cells His@ H3K9ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX023709 H3K27ac|mouse B cells His@ H3K27ac 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX023707 H3K36me3|mouse B cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX023705 Pol II (4H8)|mouse B cells Pol@ RNA Polymerase II 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022703 Smc1|Bethyl A300-055A|Mouse embryonic fibroblasts Oth@ Smc1a 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022697 Nipbl|Bethyl A301-779A|Embyonic stem cells Oth@ Nipbl 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022695 Med1/TRAP220|Bethyl A300-793A|Embyonic stem cells Oth@ Med1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022693 Med12|Bethyl A300-774A|Embyonic stem cells Oth@ Med12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022691 Smc3|Abcam AB9263|Embyonic stem cells Oth@ Smc3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022542 H3K4me2|mouse B cells His@ H3K4me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022520 embryonic stem cells E14 Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022213 H3K36me3|ab9050|Hematopoietic stem and progenitor cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022211 H3K27me3|07-449|Hematopoietic stem and progenitor cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022209 H3K4me3|07-474|Hematopoietic stem and progenitor cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022048 TBP|Abcam AB818|Embyonic stem cells Oth@ Tbp 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022044 H3K79me2|Abcam AB3594|Mouse embryonic fibroblasts His@ H3K79me2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX021892 H3K4me1 (ab8895)|A12 (E2A-/- T cell) His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX021890 E2A.E12(V-18) (sc-349)|E2A-/- pre-pro-B cell Oth@ Tcf3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX021633 STAT6<SantaCruz#sc981>|primary CD4+ T cells from spleen and lymph nodes Oth@ Stat6 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX021625 STAT4<SantaCruz#sc486>|primary CD4+ T cells from spleen and lymph nodes Oth@ Stat4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX021617 IgG1|Conditional Myb transformed myeloid cell line InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX021434 N/A|ES-cell derived erythroid progenitors InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX020953 CEBP (Santa Cruz Biotechnologies, sc-150)|Chromatin IP against CEBPb Oth@ Cebpb 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX020336 H3K4me3|8580|in vitro polarized Th17 T cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX019783 H3K4me1 (Vendor: Abcam, cat# ab8895, lot# 721955)|bone marrow-derived macrophages His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX019781 PU.1 (Vendor: Santa Cruz, cat# sc-352, lot# F1808)|bone marrow-derived macrophages Oth@ Spi1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX019220 H3K27me3|Mouse embryonic fibroblast His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX019219 H3K4me3|Mouse embryonic fibroblast His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018935 anti-H3K27me3|Chromatin IP against H3K27me3 His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018934 anti-H3K9me3|Chromatin IP against H3K9me3 His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018810 H3K4me3 (#07-473, Millipore)|Total thymocytes His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018605 IgG|Retina, Nrl ko, IgG ChIP InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018604 Crx|Retina, Nrl ko, Crx ChIP Oth@ Crx 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018600 Crx|Retina, wt, Crx ChIP Oth@ Crx 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018528 H3K4me3|R1 embryonic stem cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018527 H3K27me3|Extraembryonic endoderm stem cell His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018525 H3K4me3|Extraembryonic endoderm stem cell His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018523 H3K27me3|Trophoblast stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018521 H3K4me3|Trophoblast stem cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018520 H3K27me3|R1 embryonic stem cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018151 H3K4me1|mouse B cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018115 anti-H3K27me3|Double positive cells His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX017431 H3K4me3 (Abcam ab8580)|Embryonic stem cells His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX017080 NFI (H300): sc-5567, SantaCruz Biotechnology|mouse embryonic fibroblasts (MEF) Oth@ Nfic 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX016855 H3K4me1 (Abcam ab8895)|Embryonic stem cells His@ H3K4me1 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX016842 x-link ChIP input control. No antibody.|Embryonic stem cells InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX016838 anti-H3K36me3|Neural progenitor cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX016837 anti-HA (12CA5)|Neural progenitor cells Oth@ Epitope tags 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX016832 anti-H3K36me3|Embryonic stem cells His@ H3K36me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX016255 Suz12|Embyonic stem cells Oth@ Suz12 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX016253 Jarid2|Embyonic stem cells Oth@ Jarid2 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX015604 IRF4|murine Irf4 deficient CD4+ T Oth@ Irf4 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX015119 Embyonic stem cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX014809 V6.5 embryonic stem cells Unc@ Unclassified 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX014427 H3K9me3 (Up07222)|V6.5 mES cells His@ H3K9me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX012922 H3K27me3|mouse bone marrow-derived macrophages His@ H3K27me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX012920 H3K4me3|mouse bone marrow-derived macrophages His@ H3K4me3 2 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX003873 none, whole cell extract InP@ Input control 2 2 http://www.ncbi.nlm.nih.gov/sra?term=ERX245525 Sonicated DNA control InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX997767 RORgamma|liver Oth@ Rorc 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX997755 Rev-erbalpha|eWAT Oth@ Thra 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX985238 input|NA|spermatocytes InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX968950 none|Frontal Cortex InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX967652 Input|E9.5 hearts InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX956253 hypothalamus Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX885796 wild type anti-Irf-1 input InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX868553 H3K27ac|Day1 Neurons His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX821793 anti-PPAR? antibody|F1_eWAT_chow Oth@ Pparg 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX821791 anti-PPAR? antibody|129_eWAT_chow Oth@ Pparg 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX821789 anti-PPAR? antibody|B6_eWAT_chow Oth@ Pparg 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX821787 anti-PPAR? antibody|129_eWAT_12wLFD Oth@ Pparg 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX821785 anti-PPAR? antibody|B6_eWAT_12wLFD Oth@ Pparg 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX764234 Millipore, #07-449|E14 His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX764232 Millipore, #04-745|E14 His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX764230 C17orf96|E14 Oth@ E130012A19Rik 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760585 anti-H3K4me1|Spleen red pulp macrophages His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760581 anti-H3K27ac|Neutrophils His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760580 anti-H3K4me1|Neutrophils His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760576 anti-H3K27ac|Monocytes His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760575 anti-H3K4me1|Monocytes His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760560 anti-H3K27ac|Small intestine macrophages His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760559 anti-H3K4me1|Small intestine macrophages His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760555 anti-H3K27ac|Large intestine macrophages His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760554 anti-H3K4me1|Large intestine macrophages His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760551 anti-H3K27ac|Kupffer cells His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX760550 anti-H3K4me1|Kupffer cells His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX757571 Scl/Tal1|ES cells Oth@ Tal1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX718018 none|G1ME_GATA1s_ChIP_input InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX718016 none|G1ME_GATA1fl_ChIP_input InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX718014 anti-HA|G1ME_GATA1s_ChIP Oth@ Epitope tags 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX718012 anti-HA|G1ME_GATA1fl_ChIP Oth@ Epitope tags 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX717591 Input|Spermatocytes InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX698168 anti-HIF1a|embryonic heart Oth@ Hif1a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX669238 none|Cerebellum InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX669209 mESCs Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX661084 H3K4me3|1000 mEpiSCs His@ H3K4me2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX661081 H3K4me3|1000 mESCs His@ H3K4me2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX657176 H3k27ac|R6_striatum_H3k27ac His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX657171 H3k27ac|WT_striatum_H3k27ac His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX591717 a-H3K9me3|miwi2HET_SomaticCellsTestis_MACS_H3K9me3 His@ H3K9me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX591716 miwi2HET_SomaticCellsTestis_MACS_inputDNA InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX546225 anti-KMD4A antibody|3T3-L1 Oth@ Kdm4a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX546223 Anti-GPS2|3T3-L1_GPS2 Oth@ Gps2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX544839 Heart Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX527858 none (Input)|Mouse Embryonic Fibroblasts InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX517454 input|mouse hippocampus InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX501925 VYS Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX472909 Anti-H3K79me3|olfactory epithelium_ChIP-seq His@ H3K79me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX450322 Anti-RNA polymerase II, clone CTD4H8|BMM_LPS_0060_PolII Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX450314 Anti-RNA polymerase II, clone CTD4H8|BMM_LPS_0240_PolII Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX415001 BMAL1|Liver Oth@ Arntl 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX414999 CLOCK|Liver Oth@ Clock 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX398109 Snf2h|3134 cells Oth@ Smarca5 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX398105 monoclonal Brg1|3134 cells Oth@ Smarca4 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388796 wildtype-input InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388794 anti-H3K4me3|wildtype-h3k4me3 His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX388792 anti-H3K27me3|wildtype-h3k27me3 His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX360390 none|C2C12 myotubes, WCE InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX357099 SMRT|liver Oth@ Ncor2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX355577 Pol 2|cell line Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX355573 cell line Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX348396 TT2 Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344985 none|myotubes_input InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344974 Wdr5|Wdr5_myoblasts Oth@ Wdr5 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344972 Sin3A|Sin3A_myotubes Oth@ Sin3a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344970 MLL1|Menin_myoblasts Oth@ Kmt2a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344968 Menin|Menin_myoblasts Oth@ Men1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX344963 anti-FLAG|ING1_flag_myoblasts Oth@ Epitope tags 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX334975 Klf5|mouse ESCs Oth@ Klf5 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX334974 Klf4|mouse ESCs Oth@ Klf4 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX330667 EZH2|in-house|E14 Oth@ Ezh2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX317891 None|None WCE|pro-B cell InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX301449 None|Liver InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX276118 none|female_input InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX276117 H3K27ac|female_NAG1_LF His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX276116 H3K27ac|female_NAG1_HF His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX276115 H3K27ac|female_WT_LF His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX276114 H3K27ac|female_WT_HF His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX275461 None|None WCE|mouse heart InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX275397 Tcf1|thymus Oth@ Tcf7 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX272830 NR2F2|atria Oth@ Nr2f2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX268249 7438 cells Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX264588 anti-H3K9ac (Millipore, 07-352)|bone marrow dervied macrophages His@ H3K9ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262825 H14|NIH3T3_POLIIS5P_UO Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262823 H14|NIH3T3_POLIIS5P_LAT Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262821 H14|NIH3T3_POLIIS5P_15 Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262819 H14|NIH3T3_POLIIS5P_03 Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262817 H5|NIH3T3_POLIIS2P_UO Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262815 H5|NIH3T3_POLIIS2P_LAT Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262813 H5|NIH3T3_POLIIS2P_15 Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262811 H5|NIH3T3_POLIIS2P_03 Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262808 8WG16|NIH3T3_8WG16_LAT Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262806 8WG16|NIH3T3_8WG16_15 Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262781 SRF|NIH3T3_SRF_15 Oth@ Srf 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX262779 SRF|NIH3T3_SRF_03 Oth@ Srf 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX254629 POL2 Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX254628 LSD1 Oth@ Kdm1a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX254627 SFMBT1 Oth@ Sfmbt1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX254626 none (input) InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX252292 anti-H3K4me1 His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX252290 anti-H3K27ac His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX227229 Spt6 Oth@ Supt6 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX218191 WT_brain_116HG_ChIRP-seq Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX213835 Bethyl|BL4000 Oth@ Nkx2-1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX213395 Histone H3 trimethyl Lys4 His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209795 NFIB|HfSCs_NFIB_ChIPSeq Oth@ Nfib 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209332 H3K27Ac|Day2 differentiating Teto-Brn2 ESCs, H3K27Ac ChIP His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX209104 MEF Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX207539 Millipore 07-449|Sperm His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX207537 Millipore 17-614|Sperm His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX206370 None|pro-B cell InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205542 H3K27ac|mouse_E13.5_HL His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205541 H3K27ac|mouse_E13.5_FL His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205538 H3K27ac|mouse_E12.5_HL His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205537 H3K27ac|mouse_E12.5_FL His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205526 mouse_E13.5_HL Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205525 mouse_E13.5_FL Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205522 mouse_E12.5_HL Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX205521 mouse_E12.5_FL Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX187512 None|Mammary tissues InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX184862 Treg Input InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172940 six2|fresh Six2-expressing cells Oth@ Six2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX172850 H3K4me3 : Millipore (04-745)|liver His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160772 ESCs Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX160765 RA-treated ESCs Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX147560 H3K4me3|Macrophages His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX146525 none|Mouse V19-OSKM Fibroblast InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX145997 NIF1|lateral telencephalon Oth@ Zfp335 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143293 Pol2|Mll3/ MEF Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX143291 Mll3|Mll3/ MEF Oth@ Kmt2c 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX134776 none|B cell enriched splenocytes InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127407 H3K4me2|APC H3K4me2 ChIPseq His@ H3K4me2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX127394 H3K4me3|APC H3K4me3 ChIPseq His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX122493 Atf4|ab28830-100|sc-200|bone marrow Oth@ Atf4 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX121676 Cux2|liver tissue Oth@ Cux2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX116260 Rad21|whole brain Oth@ Rad21 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX116258 CTCF|whole brain Oth@ Ctcf 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX115362 anti-STAT5|MEF_STAT5-OE-GH-IP Oth@ Stat5a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX115360 anti-STAT5|MEF_STAT5-OE-IP Oth@ Stat5a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114988 H3K9ac|T-ALL H3K9ac His@ H3K9ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114978 H3K4me3|DP H3K4me3 His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX114976 H3K27me3|DP H3K27me3 His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1116347 rabbit IgG|IMCD3_IgG_ChIP-seq Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1116345 HNF-1|IMCD3_Hnf1b_ChIP-seq Oth@ Hnf1a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1077228 mK4 Unc@ Unclassified 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX106019 H3K27me3|MEF His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX106017 IgG|MEF InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX106015 HELLS|MEF Oth@ Hells 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX106013 E2F3|MEF Oth@ E2f3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1056354 none|input DNA_noTam InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX104151 H3K4me3|ab8580|Mouse liver cells His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX1014064 anti-H3K4me1 (39635, Active Motif)|Tet2-/-: AML1-ETO_anti-H3K4me1 His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX100298 Pol II|Liver Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX100296 Rev-erba|Liver Oth@ Nr1d1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX100294 NCoR|Liver Oth@ Ncor1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099709 none|primary myotubes InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099705 Sox6|primary myotubes Oth@ Sox6 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX099194 sc-30486|osteoblast Oth@ Tnni2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX092592 H3K4me3|H3K4me3_ChIPSeq His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX092590 H3K9ac|H3K9ac_ChIPSeq His@ H3K9ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX092586 H3K27me3|H3K27me3_ChIPSeq His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX092582 GATA3|GATA3_ChIPSeq Oth@ Gata3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX092580 control_Ab|control_Ab_ChIPSeq InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091670 H3K27me3 (Millipore 07-449)|ThyDP His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091668 H3K27me3 (Millipore 07-449)|ThyDN3 His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091666 H3K27me3 (Millipore 07-449)|FLDN2b His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX091663 H3K27me3 (Millipore 07-449)|FLDN1 His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX081822 none|Frontal cortex InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX080178 ES_Input_ChIPseq InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX079887 GATA1|sc-265|Ter119+ cells Oth@ Gata1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX079869 H3K27me3|07-449|G1E cells His@ H3K27me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX035985 H3K36me3|Doxycycline-induced MEFs His@ H3K36me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX035982 H3K4me3|Doxycycline-induced MEFs His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX035979 H3K4me1|Doxycycline-induced MEFs His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX032491 anti-NFYA|Terminally differentiated Neurons (TN) Oth@ Nfya 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX028844 anti-Brd2|Macrophages Oth@ Brd2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022855 Sin3B|C2C12 myoblasts Oth@ Sin3b 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022853 Sin3A|C2C12 myotubes Oth@ Sin3a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022851 Sin3A|C2C12 myoblasts Oth@ Sin3a 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022849 none|C2C12 myotubes InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022698 CTCF|Upstate 07-729|Mouse embryonic fibroblasts Oth@ Ctcf 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX022045 RNA Pol II (8WG16)|Covance MMS-126R|Mouse embryonic fibroblasts Pol@ RNA Polymerase II 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX019218 none|Mouse embryonic fibroblast InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018929 none|WCE InP@ Input control 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018114 anti-H3K4me3|Double positive cells His@ H3K4me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX018113 anti-H3K4me1|Double positive cells His@ H3K4me1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX006799 anti-Scl Oth@ Tal1 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX005250 anti-uH2A(E6C5) His@ H2Aub 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX003870 Tcf3 Oth@ Tcf3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX003868 Suz12 Oth@ Suz12 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX003864 Nanog Oth@ Nanog 1 2 http://www.ncbi.nlm.nih.gov/sra?term=SRX003856 H3K36me3 His@ H3K36me3 1 2 http://www.ncbi.nlm.nih.gov/sra?term=ERX631814 H3k122 His@ H3K122ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=ERX631811 H3K27ac His@ H3K27ac 1 2 http://www.ncbi.nlm.nih.gov/sra?term=ERX383753 Foxp2 Oth@ Foxp2 1 2 http://www.ncbi.nlm.nih.gov/sra?term=ERX383750 Bcl6 Oth@ Bcl6 1 2 http://www.ncbi.nlm.nih.gov/sra?term=ERX204060 polIII Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX997766 RORalpha|liver Oth@ Rora 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX997759 none|brain(ventral tegmental area) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX997758 Rev-erbalpha|brain(ventral tegmental area) Oth@ Thra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX997757 none|eWAT InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX994664 Rabbit anti-ubH2A (Cell Signaling, #8240 )|Cultured germline stem cells His@ H2Aub 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX994661 none (input)|Isolated pachytene spermatocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX994660 Rabbit anti-Scml2 (produced in-house; Hasegawa et al.)|Isolated pachytene spermatocytes Oth@ Scml2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX984581 Control IgG (Santa Cruz, sc-2028, sc-3883, sc-3888)|Skeletal muscle myoblast InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX984580 Anti-GATA4 (Santa Cruz, C-20; Santa Cruz, H-112; eBioscience, eBioevan)|Skeletal muscle myoblast Oth@ Gata4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978693 Jmjd1a|iBAT_D8_ISO_plus_JMJD1A Oth@ Kdm3a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978692 Jmjd1a|iBAT_D8_ISO_minus_JMJD1A Oth@ Kdm3a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978691 Ppar-g|iBAT_D8_ISO_plus_PPARg Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978690 Ppar-g|iBAT_D8_ISO_minus_PPARg Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978689 Arid1a|iBAT_D8_ISO_plus_ARID1A Oth@ Arid1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978688 Arid1a|iBAT_D8_ISO_minus_ARID1A Oth@ Arid1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978687 Brg1|iBAT_D8_ISO_plus_BRG1 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978686 Brg1|iBAT_D8_ISO_minus_BRG1 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978685 FAIRE|iBAT_D8_ISO_minus_FAIRE Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978684 H3K27Ac|iBAT_D8_ISO_plus_H3K27Ac His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978683 H3K27Ac|iBAT_D8_ISO_minus_H3K27Ac His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX978682 H3K4me3|iBAT_D8_ISO_plus_H3K4me3 His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX971603 Anti-H3K36me3 (AB9050, Abcam, Cambridge, MA and UK)|B-lymphoid clonal cell line Abl1 / S1Cs-A5 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX971602 Anti-H3K27me3 (ABE44 Millipore, Billerica, MA)|B-lymphoid clonal cell line Abl1 / S1Cs-A5 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX971601 none|B-lymphoid clonal cell line Abl1 / S1Cs-A5 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX968954 none|Cortex InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX968953 Total MeCP2 antibody (Chen et al. 2003)|Cortex Oth@ Mecp2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957819 none (input)|Cultured ProB InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957818 Brg1 (Millipore, catalog# 07-478, lot# DAM1776465)|Cultured ProB Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957817 Ikaros (Ik-C, rabbit antibody (kind gift of S.Smale))|Cultured PreProB Oth@ Ikzf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957816 Ikaros (Ik-C, rabbit antibody (kind gift of S.Smale))|Cultured ProB Oth@ Ikzf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957695 H3K27me3 (Millipore, #07-449, lot# 1959680)|newborn lens, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957694 H3K27me3 (Millipore, #07-449, lot# 1959680)|e12.5 embryonic forebrain, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957689 RNA polymerase II (Abcam, ab817, lot# GR153063-402)|newborn lens, Pol2 ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957688 RNA polymerase II (Abcam, ab817, lot# GR153063-402)|e12.5 embryonic forebrain, Pol2 ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957687 H3K27ac (Millipore, #07-360, lot# 961080)|newborn lens, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957686 H3K27ac (Millipore, #07-360, lot# 961080)|e12.5 embryonic forebrain, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957685 H3K4me3 (Abcam, ab8580, lot# GR152121-1)|newborn lens, H3K4me3 ChIP His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957684 H3K4me3 (Abcam, ab8580, lot# GR152121-1)|e12.5 embryonic forebrain, H3K4me3 ChIP His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957683 H3K4me1 (Abcam, ab8895, lot# GR61280-1)|newborn lens, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957682 H3K4me1 (Abcam, ab8895, lot# GR61280-1)|e12.5 embryonic forebrain, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957680 Pax6 (Millipore, ab2237, lot# NG1731333)|newborn lens, Pax6 ChIP Oth@ Pax6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957137 ab9050 (Abcam)|embryonic testes FACS-sorted cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX957136 N/A|embryonic testes FACS-sorted cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX956827 anti-H3K27me3 (Upstate 07-449, lot# 2455635)|EED-null ES cells, H3K27me3 ChIP, Upstate antibody His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX956826 anti-H3K27me3 (Abcam 6002, lot# GR130002-1)|EED-null ES cells, H3K27me3 ChIP, Abcam antibody His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX956825 none|EED-null ES cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX956824 anti-H3K27me3 (Upstate 07-449, lot# 2455635)|WT ES cells, H3K27me3 ChIP, Upstate antibody His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX956823 anti-H3K27me3 (Abcam 6002, lot# GR130002-1)|WT ES cells, H3K27me3 ChIP, Abcam antibody His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX956822 none|WT ES cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX956779 none|Flt3L cultured dendritic cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950723 N/A|Embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950722 Normal Mouse IgG (Millipore 12-371)|Embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950721 Flag (Sigma F1804)|Embryonic stem cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950713 H3K27ac (ab4729, Abcam)|MBD3-/- ES His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950712 Oct4 (sc5279(C-10), Santa Cruz)|MBD3flox/- iPSC Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950711 H3K27ac (ab4729, Abcam)|MBD3flox/- iPSC His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950710 Oct4 (sc5279(C-10), Santa Cruz)|MBD3flox/- 8 days after dox induction Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950709 H3K27ac (ab4729, Abcam)|MBD3flox/- 8 days after dox induction His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950708 Oct4 (sc5279(C-10), Santa Cruz)|MBD3flox/- 4 days after dox induction Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950707 H3K27ac (ab4729, Abcam)|MBD3flox/- 4 days after dox induction His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950706 Oct4 (sc5279(C-10), Santa Cruz)|WT iPSC Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950705 H3K27ac (ab4729, Abcam)|WT iPSC His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950704 H3K27ac (ab4729, Abcam)|WT 8 days after dox induction His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950703 Oct4 (sc5279(C-10), Santa Cruz)|WT 4 days after dox induction Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950702 H3K27ac (ab4729, Abcam)|WT 4 days after dox induction His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950701 Oct4 (sc5279(C-10), Santa Cruz)|MBD3flox/- MEF Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950700 H3K27ac (ab4729, Abcam)|MBD3flox/- MEF His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950699 Oct4 (sc5279(C-10), Santa Cruz)|WT MEF Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX950698 H3K27ac (ab4729, Abcam)|WT MEF His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX898972 NM1|Mouse Embryonic Fibroblasts Oth@ Myo1c 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX897074 NCOR2 (PA1-843) (Thermo Scientific)|Bone-marrow derived macrophages Oth@ Ncor2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX897073 HDAC3 (sc-11417) (Santa Cruz Biotechnology)|Bone-marrow derived macrophages Oth@ Hdac3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX894103 anti-RNA polymerase II (Millipore, 04-1572)|splenic B cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX886482 none|TAL transgenic/HEB heterozygous with Notch truncations (provided by I.Aifantis, NYU) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX886479 none|pro B-Cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX886478 Pu.1 (SC-352, Santa Cruz)|Bcr-Abl transformed p19Arf null B-ALL Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX886477 Pu.1 (#2266, Cell Signaling)|Bcr-Abl transformed p19Arf null B-ALL Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX885791 wild type anti-GFP input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX885790 GFP Tag Antibody (3E6)|wild type anti-GFP ChIP Oth@ GFP 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX884083 p300 (sc-584; Santa Cruz)|MLL-AF9/NrasG12D murine cell line Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX878777 anti-BRG1 (SMARCA4) antibody|3134 cells Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX878733 anti-IgG (Jackson ImmunoResearch, catalog# 011-000-003, lot# 79330)|placenta tissue embryonic day 17.5 (E17.5) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX878732 anti-Grhl2 (Sigma Aldrich, catalog# HPA004820, lot# A35809)|placenta tissue embryonic day 17.5 (E17.5) Oth@ Grhl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX878005 H3K9me3(ab8898, Abcam)|CGR8 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX878004 H3K27ac (ab4729, Abcam)|CGR8 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX878003 H3K4me3 (ab8580, Abcam)|CGR8 His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX873343 Sirt6 (Cell Signaling Technology, 12486 in a ratio of 5ml/2e7 cells)|Embryonic stem cells (ESCs) Oth@ Sirt6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX871678 Myc (Santa Cruz; sc-764 X, lot# D2314)|Intestinal villus cells, wild type, Myc ChIP Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX871677 E2f3 (Santa Cruz; sc-878 X, lot# E1712)|Intestinal villus cells, wild type, E2f3 ChIP Oth@ E2f3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX871676 Myc (Santa Cruz; sc-764 X, lot# D2314)|Intestinal crypt cells, wild type, Myc ChIP Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX871675 E2f3 (Santa Cruz; sc-878 X, lot# E1712)|Intestinal crypt cells, wild type, E2f3 ChIP Oth@ E2f3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX871674 Myc (Santa Cruz; sc-764 X, lot# D2314)|Intestinal villus cells, Rb KO, Myc ChIP Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX871673 E2f3 (Santa Cruz; sc-878 X, lot# E1712)|Intestinal villus cells, Rb KO, E2f3 ChIP Oth@ E2f3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX871672 Myc (Santa Cruz; sc-764 X, lot# D2314)|Intestinal crypt cells, Rb KO, Myc ChIP Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX871671 E2f3 (Santa Cruz; sc-878 X, lot# E1712)|Intestinal crypt cells, Rb KO, E2f3 ChIP Oth@ E2f3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX869303 none|embryonic stem cells (RA, day1)|46C mES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX869302 none|embryonic stem cells|Haunt P-exon2 KO mES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX868180 Histone H3.3 (Abcam, ab62642)|Embryonic Stem Cells His@ H3.3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX863175 None (input)|Mouse Embryonic day 14.5 Fetal Liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX852568 Mammary tissues Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX849882 Jmjd1c|embryonic stem cells Oth@ Jmjd1c 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX849881 Spt16|embryonic stem cells Oth@ Supt16 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX848544 c-Jun|mouse embryonic fibroblasts (MEFs) Oth@ Jun 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX848543 input|mouse embryonic stem cells(mESCs) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX848542 c-Jun|mouse embryonic stem cells(mESCs) Oth@ Jun 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX847840 4-Oct|Abcam ab19857|mouse embryonic stem cells (E14) Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX841017 none|Mouse ESCs, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX841016 HP1 (Euromedex 1MOD-1A9-AS, lot# 091809)|Mouse ESCs, HP1 ChIP Oth@ Cbx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837365 MyoD antibody 6975|Negative control. ChIP-Seq with MyoD antibody 6975 in mouse P19 cells Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837364 NeuroD2 antibody 1240|Negative control. ChIP-Seq with NeuroD2 antibody 1240 in mouse P19 cells Oth@ Neurod2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837363 NeuroD2 antibody 1240|ChIP-Seq with NeuroD2 antibody 1240 in mouse P19 cells transduced with NeuroD2 Oth@ Neurod2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837362 NeuroD2 antibody 1165|ChIP-Seq with NeuroD2 antibody 1165 in mouse P19 cells transduced with NeuroD2 Oth@ Neurod2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837361 MyoD antibody 6975|ChIP-Seq with MyoD antibody 6975 in mouse P19 cells transduced with MD(ND2bHLH)WCS mutant Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837360 MyoD antibody 6196|ChIP-Seq with MyoD antibody 6196 in mouse P19 cells transduced with MD(ND2bHLH)WCS mutant Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837359 MyoD antibody 6975|ChIP-Seq with MyoD antibody 6975 in mouse P19 cells transduced with MD(ND2bHLH)WC mutant Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837358 MyoD antibody 6196|ChIP-Seq with MyoD antibody 6196 in mouse P19 cells transduced with MD(ND2bHLH)WC mutant Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837357 MyoD antibody 6975|ChIP-Seq with MyoD antibody 6975 in mouse P19 cells transduced with MD(ND2bHLH) chimera Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837356 MyoD antibody 6196|ChIP-Seq with MyoD antibody 6196 in mouse P19 cells transduced with MD(ND2bHLH) chimera Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837355 MyoD antibody 6975|ChIP-Seq with MyoD antibody 6975 in mouse P19 cells transduced with MyoD Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX837354 MyoD antibody 6196|ChIP-Seq with MyoD antibody 6196 in mouse P19 cells transduced with MyoD Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX831403 Pol II Antibody (N-20)|primary Rag2 -/- thymocytes Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX825831 RUNX1/ETO|myeloid progenitors _expansion cells Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX825830 RUNX1/ETO|Floating progenitors cells Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX823637 anti-TBX19 (HPA005800, Sigma-Aldrich)|AtT20 cells Oth@ Tbx19 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX823635 anti-H3K4me1 (07-436, Millipore)|AtT20 cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX823634 anti-H3K27ac (b4729, Abcam)|AtT20 cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX823633 anti-P300 (sc585)|AtT20 cells Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX823607 Zic3 (Abcam, ab80966)|ES cell culture Oth@ Zic3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821805 anti-GR antibody|129_eWAT_chow_GR Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821804 anti-GR antibody|B6_eWAT_chow_GR Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821803 anti-GR antibody|129_iWAT_chow_GR Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821802 anti-GR antibody|B6_iWAT_chow_GR Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821801 anti-PPAR? antibody|input_F1_iWAT_gsnap InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821800 anti-PPAR? antibody|input_129_iWAT_gsnap InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821799 anti-PPAR? antibody|input_B6_iWAT_gsnap InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821798 anti-PPAR? antibody|3T3L1 Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821797 anti-PPAR? antibody|F1_iWAT_chow Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821796 anti-PPAR? antibody|129_iWAT_chow Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX821795 anti-PPAR? antibody|B6_iWAT_chow Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816548 MigR1-HA-Gata1|G1ME cells Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816547 MigR1-HA-Gata1s|anti-HA|G1ME cells Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816546 MigR1-HA-Gata1|anti-HA|G1ME cells Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816342 V5-Fbxl10|D2_V5_Fbxl10-1_peaks Oth@ Kdm2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816341 RING1B|D2_RING1B_Fbxl10_Exp.2 Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816340 RING1B|D2_RING1B_Fbxl10_Exp.1 Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816339 RING1B|D2_RING1B_dFbox_Exp.2 Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816338 RING1B|D2_RING1B_dFbox_Exp.1 Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816337 RING1B|D2_RING1B_Empty_Exp.2 Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX816336 RING1B|D2_RING1B_Empty_Exp.1 Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX815106 none|sciatic nerve InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX815105 H3K27me3|Millipore 07-449, Lot#2064519|sciatic nerve His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX811398 anti-H3K4me3|p30-GMP-blast cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX811397 anti-CEBPA|p30-GMP-blast cells Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX810440 H3K79me2 (Abcam, 3594, lot GR173874-1)|Embryonic stem cells His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX810439 H3K36me3 (Abcam, 9050, lot GR165936-1|Embryonic stem cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX810438 H3K27me3 (Millipore, 07-449, lot 2275589)|Embryonic stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX810437 H3K9me3 (Hattori T. et al. 309M3A, lot 3)|Embryonic stem cells His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX810436 H3K4me3 (Active Motif, 39159, lot 12613005)|Embryonic stem cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX803861 RAD23B|murine embryonic stem cells Oth@ Rad23b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX803860 IgG|murine embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX802062 none|mouse embryonic stem cells E14 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX802061 ab21873, Abcam|mouse embryonic stem cells E14 Oth@ Cbx7 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX802060 39663, Active Motif|Neural progenitor cells Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801904 None|Spleen red pulp macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801903 None|Neutrophils InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801902 None|Monocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801901 None|Peritoneal cavity macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801900 None|Lung macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801899 None|Small intestine macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801898 None|Large intestine macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801897 None|Kupffer cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX801896 None|Brain microglia InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800022 Wildtype BAT Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800021 H3K27ac (Abcam ab4729)|Prdm16 Knockout BAT His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800020 H3K27ac (Abcam ab4729)|Wildtype BAT His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800019 Med1(Bethyl A300-793A)|Prdm16 Knockout BAT Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800018 Med1(Bethyl A300-793A)|Wildtype BAT Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800017 PolII (Santa Cruz sc-899 or sc-9001)|Prdm16 Knockout BAT Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800016 PolII (Santa Cruz sc-899 or sc-9001)|Wildtype BAT Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800011 PolII (Santa Cruz sc-899, sc-9001)|Epididymal white adipose tissue Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800010 PolII (Santa Cruz sc-899, sc-9001)|Brown adipose tissue Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800009 H3K27ac (Abcam ab4729)|Epididymal white adipose tissue His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX800008 H3K27ac (Abcam ab4729)|Brown adipose tissue His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799010 none|Non-neuronal nuclei from 10 month old APP/PS1-21 SAHA-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799009 none|Non-neuronal nuclei from 10 month old APP/PS1-21 vehicle-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799008 none|Non-neuronal nuclei from 10 month old vehicle-treated WT littermates of APP/PS1-21 animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799007 none|Neuronal nuclei from 10 month old APP/PS1-21 SAHA-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799006 none|Neuronal nuclei from 10 month old APP/PS1-21 vehicle-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799005 none|Neuronal nuclei from 10 month old vehicle-treated WT littermates of APP/PS1-21 animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799004 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Non-neuronal nuclei from 10 month old APP/PS1-21 SAHA-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799003 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Non-neuronal nuclei from 10 month old APP/PS1-21 vehicle-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799002 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Non-neuronal nuclei from 10 month old vehicle-treated WT littermates of APP/PS1-21 animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799001 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Neuronal nuclei from 10 month old APP/PS1-21 SAHA-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX799000 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Neuronal nuclei from 10 month old APP/PS1-21 vehicle-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798999 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Neuronal nuclei from 10 month old vehicle-treated WT littermates of APP/PS1-21 animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798998 none|Non-neuronal nuclei from 20 month old SAHA-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798997 none|Non-neuronal nuclei from 20 month old vehicle-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798996 none|Non-neuronal nuclei from 3 month old vehicle-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798995 none|Neuronal nuclei from 20 month old SAHA-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798994 none|Neuronal nuclei from 20 month old vehicle-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798993 none|Neuronal nuclei from 3 month old vehicle-treated animals InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798992 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Non-neuronal nuclei from 20 month old SAHA-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798991 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Non-neuronal nuclei from 20 month old vehicle-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798990 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Non-neuronal nuclei from 3 month old vehicle-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798989 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Neuronal nuclei from 20 month old SAHA-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798988 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Neuronal nuclei from 20 month old vehicle-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX798987 Anti-Histone H4 (acetyl K12) antibody (Abcam, catalog# ab61238, lot# GR38757-5)|Neuronal nuclei from 3 month old vehicle-treated animals His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX796814 input_LPS(120') InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX796813 input_unstimulated InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX796812 H3K18Cr_LPS(120') His@ H3K18cr 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX796811 H3K18Cr_unstimulated His@ H3K18cr 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX796810 H3K18Ac_LPS(120') His@ H3K18ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX796809 H3K18Ac_unstimulated His@ H3K18ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX791600 input|mouse saline NAc ChIP input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX791596 input|mouse cocaine NAc ChIP input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX790907 H3K27ac|Double Positive thymocytes His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX790906 H3K9me3|Double Positive thymocytes His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX769795 SREBP-1|sc-13551, sc-8984, sc-367|Primary thioglycollate-elicited peritoneal macrophages Oth@ Srebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX769794 PPARg|sc-7196, sc-1984|Primary thioglycollate-elicited peritoneal macrophages Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX769793 RXR|sc-553, sc-774|Primary thioglycollate-elicited peritoneal macrophages Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX767125 Anti-acetyl-Histone H3|TAC TSA H3Ac His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX767124 Anti-acetyl-Histone H3|TAC Veh H3Ac His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX767123 Anti-acetyl-Histone H3|Sham TSA H3Ac His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX767122 Anti-acetyl-Histone H3|Sham Veh H3Ac His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX764229 Flag-M2 (Sigma Aldrich)|E14 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX764228 none|E14 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX763066 H3K4me3|P5424 H3K4me3 (KM) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX763065 H3K4me3|P5424 H3K4me3 (DMSO) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX763064 H3K4me2|P5424 H3K4me2 (KM) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX763063 H3K4me2|P5424 H3K4me2 (DMSO) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX763062 H3K4me1|P5424 H3K4me1 (KM) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX763061 H3K4me1|P5424 H3K4me1 (DMSO) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX763060 RNA Pol II|P5424 RNA Pol II (KM) Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX763059 RNA Pol II|P5424 RNA Pol II (DMSO) Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760591 none (whole cell extract)|Lung macrophages with CD45.1 mark InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760590 none (whole cell extract)|Kupffer cells with CD45.1 mark InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760589 none (whole cell extract)|Spleen red pulp macrophages with CD45.1 mark InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760588 none (whole cell extract)|Peritoneal cavity macrophages with CD45.1 mark InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760586 anti-H3K27ac|Spleen red pulp macrophages His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760584 anti-H3K4me2|Neutrophils His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760579 anti-H3K4me2|Monocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760568 anti-H3K4me2|Lung macrophages His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760563 anti-H3K4me2|Small intestine macrophages His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760558 anti-H3K4me2|Large intestine macrophages His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760549 anti-H3K4me2|Brain microglia His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760026 Rabbit IgG (Sigma I5006)|X18.1.1 AML cell line, empty vector, IgG ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760025 Rabbit IgG (Sigma I5006)|X18.1.1 AML cell line, PuER, IgG ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760024 H3K27Ac (Abcam ab4729)|X18.1.1 AML cell line, empty vector, H3K27Ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760023 H3K27Ac (Abcam ab4729)|X18.1.1 AML cell line, PuER, H3K27Ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760022 CEBPA (Santa Cruz sc61x)|X18.1.1 AML cell line, empty vector, CEBPA ChIP Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760021 CEBPA (Santa Cruz sc61x)|X18.1.1 AML cell line, PuER, CEBPA ChIP Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760020 Pu.1 (Santa Cruz sc352x)|X18.1.1 AML cell line, empty vector, Pu.1 ChIP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX760019 Pu.1 (Santa Cruz sc352x)|X18.1.1 AML cell line, PuER, Pu.1 ChIP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX759795 Hand1|ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells Oth@ Hand1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX759627 none|ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX759626 PREP-1 N-15 (Santa Cruz Biotechnology, sc-6245)|ES cells Oth@ Pknox1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX759475 NOT APPLICABLE|Hematopoietic stem cells (HSC) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX759474 Abcam ab8895|Hematopoietic stem cells (HSC) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX759473 Abcam ab4729|Hematopoietic stem cells (HSC) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX759251 Millipore 07-549|Hematopoietic stem cells (HSC) His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX757621 H3K9me1, Ab8896 (Abcam)|RA-treated WT ESC His@ H3K9me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX757620 H3K9me1, Ab8896 (Abcam)|WT ESC His@ H3K9me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX757619 H3K9me1, Ab8896 (Abcam)|RA-treated Mutant ESC His@ H3K9me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX757618 H3K9me1, Ab8896 (Abcam)|Mutant ESC His@ H3K9me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX757607 H3K9me2, mAbcam 1220|WT ESC His@ H3K9me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX757595 H3K9me, mAbcam 1220|WT ESC His@ H3K9me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX757573 ES cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX751770 H3K27me3|pancreatic islet tumor His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX751769 H3K4me3|pancreatic islet tumor His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX751768 none (input)|pancreatic islet tumor InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX750939 anti-Sox2 (R&D Systems, Cat. # AF2018, Lot # KOY0112011)|ES cells treated with TSA, Sox2 ChIP Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747757 ESC, hnRNP L, Adriamycin Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747756 ESC, hnRNP L, untreated Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747755 ESC, RNA Pol II, Adriamycin Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747754 ESC, RNA Pol II, untreated Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747753 ESC, H3K79me2, Adriamycin His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747752 ESC, H3K79me2, untreated His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747751 ESC, H3K27me3, Adriamycin His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747750 ESC, H3K27me3, untreated His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747749 ESC, H3K4me3, Adriamycin His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX747748 ESC, H3K4me3, untreated His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX745828 none (input)|burst-forming unit erythroid (BFU-E) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX745813 Meis1/2 (K830, K844)|mouse optic cups_WT_ChIP Oth@ Meis1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX744021 BRD3 sera|G1E_BRD3 +GATA1 Oth@ Brd3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX744020 BRD3 sera|G1E_BRD3 G1E Oth@ Brd3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742837 H3K4me1|MC_A12_pDC_sh-Irf8_K4me1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742836 H3K4me1|MC_A10_cDC_sh-Cebpb_K4me1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742835 H3K4me1|MC_A11_pDC_sh-control_K4me1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742834 H3K4me1|MC_A09_cDC_sh-control_K4me1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742833 Cebpb|pdc_cebpb Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742832 Cebpb|cdc_cebpb Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742831 Irf8|pdc_irf8 Oth@ Irf8 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742830 Irf8|cdc_irf8 Oth@ Irf8 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742829 Pu.1|Sample_MC_12_pDC_pu1 Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742828 Pu.1|Sample_MC_05_cDC_pu1 Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742827 H3K27Ac|05_MC_in_vivo_pDC_K27Ac_1 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742826 H3K27Ac|03_MC_moDC_K27Ac_1 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742825 H3K27Ac|01_MC_moDC_K27Ac_1 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742824 H3K4me3|pdc_k4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742823 H3K4me3|cdc_k4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742822 H3K4me1|Sample_MC_16_InVivo_pDC_K4me1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742821 H3K4me1|pdc_k4me1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX742820 H3K4me1|cdc_k4me1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX739815 none (input)|ESC_Setdb1_KO_+Tam InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX739814 H3K27me3 (Millipore: 07-449)|ESC_Setdb1_KO_+Tam His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX739812 none (input)|ESC_Setdb1_KO_noTam InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX739811 H3K27me3 (Millipore: 07-449)|ESC_Setdb1_KO_noTam His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX739810 H3K9me3 (Active Motif: 39161)|ESC_Setdb1_KO_noTam His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX737011 anti-ESR1 C-terminal antibody (Santa Cruz sc543)|cells from preantral follicles maintained for 9 days in vitro and treated for 45 minutes with 10-7M estradiol Oth@ Esr1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX737010 anti-FOXL2 C-terminal antibody (from lab)|cells from preantral follicles maintained for 9 days in vitro and treated for 45 minutes with 10-7M estradiol Oth@ Foxl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX737009 none|cells from preantral follicles maintained for 9 days in vitro and treated for 45 minutes with 10-7M estradiol InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX736462 none|iMOP cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX733575 H3K9me3|ab8898|Embryonic stem cells His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX733574 H3K27me3|ab6002|Embryonic stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX733573 H3K36me3|ab9050|Embryonic stem cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX733572 H3K79me2|ab3594|Embryonic stem cells His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX733571 H3K4me3|ab8580|Embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX733570 H3K27Ac|ab4729|Embryonic stem cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX733569 IgG|12-370|Embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX732508 input|GC B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX732507 input|CSR activated B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX732348 H3K27Ac (abcam, ab4729)|GC B cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX732347 H3K27Ac (abcam, ab4729)|CSR activated B cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX722328 NA|activated B cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719841 none (input)|Round spermatid InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719840 Millipore 06-866|Round spermatid His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719839 Active Motif AM39167|Round spermatid His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719838 Millipore 07-595|Round spermatid His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719837 Millipore 07-328|Round spermatid His@ H4K8ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719836 Millipore 07-327|Round spermatid His@ H4K5ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719835 Active Motif AM39137|Round spermatid His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719834 Abcam ab8898|Round spermatid His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX719833 Bethyl A301-985A50|Round spermatid Oth@ Brd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX717597 EED (Millipore, 17-663)|Spermatocytes Oth@ Eed 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX717593 H3K4me3 (Abcam, ab8580)|Spermatocytes His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX708732 anti-FLAG M2 clone|Neural progenitor cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX708731 Anti-Olig-2 Antibody|Neural progenitor cells Oth@ Olig2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX708730 anti-NKX6.1|Cocktail of DSHB (F55A10, F55A12, F64A6B4, and F65A2), RD Systems (AF5857) and custom (from T. Jessell)|Neural progenitor cells Oth@ Nkx6-1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX708729 Anti-NKX2-2|Cocktail of DSHB (74.5A5), Sigma (HPA003468), and custom (from T. Jessell)|Neural progenitor cells Oth@ Nkx2-2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX706576 none|Neuro2a cells transfected with a FLAG-tag expressing vector InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX706575 anti-FLAG antibody (Sigma, F2426)|Neuro2a cells transfected with a FLAG-tag expressing vector Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX706574 none|Neuro2a cells expressing doxycycline-dependent Lhx5 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX706573 anti-FLAG antibody (Sigma, F2426)|Neuro2a cells expressing doxycycline-dependent Lhx5 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX703667 serine 5-phosphorylated RNA Polymerase II (Abcam)|primary MEFs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX702812 H3K27me3|T cell acute lymphocytic leukemia His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX702811 H3K4me3|T cell acute lymphocytic leukemia His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX702810 H3K4me1|T cell acute lymphocytic leukemia His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700958 none|Mouse hair follicle TACs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700957 Cell Signal pSmad1/5/8 no 9511|Mouse hair follicle TACs Oth@ Smad1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700956 none|Mouse hair follicle stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700955 Cell Signal pSmad1/5/8 no 9511|Mouse hair follicle stem cells Oth@ Smad1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700926 Splenic B cells, Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700925 Splenic B cells, miR-155 KO, PU.1 IP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700924 Splenic B cells, PU.1 KI, PU.1 IP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700923 Splenic B cells, Wild type, PU.1 IP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700366 RNAPol_II|Millipore 05-623-Z|Neu-positive mouse mammary tumor Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX700365 TFAP2C|Millipore 05-909|Neu-positive mouse mammary tumor Oth@ Tfap2c 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX699776 H3K27me3 (#17-622, Millipore)|Junction E10.5 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX699775 H3K27me3 (#17-622, Millipore)|Maxillary arch E10.5 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX699297 H3K27ac (abcam, catalog# ab4729, lot# GR132150-1)|primary HFSCs His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX699296 none|primary HFSCs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX698167 none|embryonic heart InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697703 anti-CTCF antibody|CTCF ChIP-Seq 0 min Cort Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697702 Input Pol II InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697693 RNA polymerase II phosphoS5 antibody|Pol II ChIP-Seq 60 min Cort Constant Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697692 RNA polymerase II phosphoS5 antibody|Pol II ChIP-Seq 60 min Cort Pulsed Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697691 RNA polymerase II phosphoS5 antibody|Pol II ChIP-Seq 20 min Cort Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697690 RNA polymerase II phosphoS5 antibody|Pol II ChIP-Seq 0 min Cort Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697689 GR ChIP-Seq input 60 min Cort Constant InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697688 GR ChIP-Seq input 60 min Cort Pulsed InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697687 GR ChIP-Seq input 20 min Cort InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697686 GR ChIP-Seq input 0 min Cort InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697685 GR Antibody|GR ChIP-Seq 60 min Cort Constant Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697684 GR Antibody|GR ChIP-Seq 60 min Cort Pulsed Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697683 GR Antibody|GR ChIP-Seq 20 min Cort Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX697682 GR Antibody|GR ChIP-Seq 0 min Cort Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX695944 Normal Rabbit IgG|Myoblast InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX695942 MEF2A|Myoblast Oth@ Mef2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX695809 anti-HA|416B expressing HA-T-VP64-PU.1-14 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX695808 anti-HA|416B WT control Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX691800 Flag (SIGMA M2 F1804)|dCas9-noED + control gRNA Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX691799 Flag (SIGMA M2 F1804)|dCas9-KRAB + S2 gRNA Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX691798 Flag (SIGMA M2 F1804)|dCas9-KRAB + S1 gRNA Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX690548 none|VEC_Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX690547 H3K9ac (Epitomics, 1328-1)|VEC_H3K9ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX690546 none|CRE_Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX690545 H3K9ac (Epitomics, 1328-1)|CRE_H3K9ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX689500 testis Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX689499 PRDM9|testis Oth@ Prdm9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX688941 anti-FOXL2 C-terminal antibody (from lab)|cells from preantral follicles maintained for 9 days in vitro Oth@ Foxl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX688940 none|cells from preantral follicles maintained for 9 days in vitro InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686940 H3K4me3 (Abcam ab8580)|mouse embryonic stem cell His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686491 Whole cell extract|Dgcr8 knockout mouse embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686490 RNAP2 antibody: Covance MMS-128P|Dgcr8 knockout mouse embryonic stem cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686489 H3K36me3 antibody: Abcam ab9050|Dgcr8 knockout mouse embryonic stem cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686488 H3K27ac antibody: Abcam ab4729|Dgcr8 knockout mouse embryonic stem cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686487 H3K9me3 antibody: Abcam ab8898|Dgcr8 knockout mouse embryonic stem cells His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686486 H3K27me3 antibody: Upstate 07-449|Dgcr8 knockout mouse embryonic stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686485 H3K4me3 antibody: Millipore 07-473|Dgcr8 knockout mouse embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686038 H3K27me3S28p (Hansen lab)|6-OHDA lesioned striatum, L-DOPA injected His@ H3K27me3S28ph 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686037 H3K27me3S28p (Hansen lab)|unlesioned striatum, L-DOPA injected His@ H3K27me3S28ph 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686036 H3K4me3 (9751, Cell Signaling)|6-OHDA lesioned striatum, L-DOPA injected His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686035 H3K4me3 (9751, Cell Signaling)|unlesioned striatum, L-DOPA injected His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686034 H3K27me3 (9756, Cell Signaling)|6-OHDA lesioned striatum, L-DOPA injected His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686033 H3K27me3 (9756, Cell Signaling)|unlesioned striatum, L-DOPA injected His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686032 none|6-OHDA lesioned striatum, L-DOPA injected InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX686031 none|unlesioned striatum, L-DOPA injected InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX685926 total rabbit IgG, Millipore, Cat. #12-370|cerebral cortex InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX685754 pan-H3 (Sigma #I8140)|primordial germ cells His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX685753 H3K9me3 (Active Motif #39161)|somatic gonadal cells His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX682466 chip antibody: anti-CTCF|primary CD4+ T cells from spleen and lymph nodes Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX682465 chip antibody: anti-p300, antibody vendor/catalog#: sc-585, Santa Cruz Biotechnology|primary CD4+ T cells from spleen and lymph nodes Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX682276 CD4+ cells, Foxo1tagBirA mice Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX682275 CD4+ cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX682274 Strepdavidin|CD4+ cells, Foxo1tagBirA mice Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX682273 Foxo1 antibody (Abcam, Ab39670)|CD4+ cells Oth@ Foxo1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX681861 Rabbit polyclonal antibodies to DMRT6|Dmrt6 ChIP Oth@ Dmrtb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX681860 Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680487 P300 (Santa Cruz, sc585, lot# B0413)|brain Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680486 BMI1 (Bethyl, A301-694A, lot# A301-694A-3)|brain Oth@ Bmi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680485 H2AK119ub1 (Cell Signaling, 8240, lot# 1)|brain His@ H2AK119ub 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680484 H3K27me3 (Millipore, 07-449, lot# JBC1873477)|brain His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680483 H3K36me3 (abcam, ab9050, lot#, GR75636-1)|brain His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680482 H3K4me3 (abcam, ab8580, lot# GR86940-1)|brain His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680481 H3K27ac (abcam, ab4729, lot# GR103379-1)|brain His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680480 PolII (Santa Cruz, sc899, lot#, G2414)|brain Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680479 RING1B (form Luciano Di Croce)|brain Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680478 AUTS2 (house made)|brain Oth@ Auts2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX680477 none|brain InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX675961 anti-H3K4me3 (Active Motif 39159)|primary CD4+ T cells from spleen His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX675957 anti-RARa (Diagenode C15310155)|primary CD4+ T cells from spleen Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX672417 CTCF|Millipore #07-729|Differentiated motor neuron Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX671992 input DNA|none|embryonic stem cells, TC11, empty vector, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX671896 none|H3f3b null testis tissue InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX671758 In-vivo leukemia cells from spleen Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX671755 H3K36me3 (Abcam, ab9050)|In-vivo leukemia cells from spleen His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX671754 H3K27me3 (Millipore, 07-449)|In-vivo leukemia cells from spleen His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX671749 none|In-vivo leukemia cells from spleen InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX669236 none|Forebrain InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX669235 Total MeCP2 antibody (Chen et al. 2003)|Forebrain Oth@ Mecp2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX668246 Cdk7|Bethyl A300-405A|Embryonic stem cells Oth@ Cdk7 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX668245 RNA Pol II (Ser7 phospho CTD)|Millipore 04-1570|Embryonic stem cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX667880 dendritic cells, D1 curdlan + Fk506 Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX667879 dendritic cells, D1 curdlan+Fk506 2h H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX667878 dendritic cells, D1 curdlan Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX667877 dendritic cells, D1 curdlan 2h H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX667876 dendritic cells, D1 NT Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX667875 dendritic cells, D1 NT H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX667874 dendritic cells, NFAT1 curdlan Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX667873 dendritic cells, NFAT1 curdlan V5 Oth@ Nfatc2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX663313 Pol II (N20) Santa Cruze, SC-899|mouse embryonic pluripotent stem cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX663312 Pol II (N20) Santa Cruze, SC-899|mouse reprogramming intermediates at Day8 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX663311 Pol II (N20) Santa Cruze, SC-899|mouse reprogramming intermediates at Day5 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX663310 Pol II (N20) Santa Cruze, SC-899|mouse embryonic fibroblasts Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX661586 CTCF, MillIpore 07-730|Patski cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX661585 CTCF, MillIpore 07-729|Mouse adult hybrid brain Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX661083 H3K4me3|1 million mEpiSCs His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX661080 H3K4me3|1 million mESCs His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658437 H3K4me3|Common Lymphoid Progenitor (CLP) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658436 H3K4me3|NK Cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658435 H3K4me3|T CD8+ cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658434 H3K4me3|T CD4+ cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658433 H3K4me3|B cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658432 H3K4me3|Bone Marrow Macrophages His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658431 H3K4me3|Monocytes His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658430 H3K4me3|Granulocytes His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658429 H3K4me3|Erythrocytes B (Ery B) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658428 H3K4me3|Erythrocytes A (Ery A) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658427 H3K4me3|Megakaryocitic erythroyd progenitor (MEP) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658426 H3K4me3|Granulocyte Monocyte Progenitor (GMP) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658425 H3K4me3|Common Myeloid Progenitor (CMP) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658424 H3K4me3|Multipotent Progenitor (MPP) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658423 H3K4me3|Short Term Hematopoietic Stem Cell (ST-HSC) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658422 H3K4me3|Long Term Hematopoietic Stem Cell (LT-HSC) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658421 H3K4me2|T CD8+ cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658420 H3K4me2|T CD4+ cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658419 H3K4me2|Common Lymphoid Progenitor (CLP) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658418 H3K4me2|NK Cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658417 H3K4me2|B cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658416 H3K4me2|Bone Marrow Macrophages His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658415 H3K4me2|Monocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658414 H3K4me2|Granulocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658413 H3K4me2|Erythrocytes B (Ery B) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658412 H3K4me2|Erythrocytes A (Ery A) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658411 H3K4me2|Megakaryocitic erythroyd progenitor (MEP) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658410 H3K4me2|Granulocyte Monocyte Progenitor (GMP) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658409 H3K4me2|Common Myeloid Progenitor (CMP) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658408 H3K4me2|Multipotent Progenitor (MPP) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658407 H3K4me2|Short Term Hematopoietic Stem Cell (ST-HSC) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658406 H3K4me2|Long Term Hematopoietic Stem Cell (LT-HSC) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658405 H3K4me1|Common Lymphoid Progenitor (CLP) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658404 H3K4me1|NK Cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658403 H3K4me1|T CD8+ cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658402 H3K4me1|T CD4+ cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658401 H3K4me1|B cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658400 H3K4me1|Bone Marrow Macrophages His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658399 H3K4me1|Monocytes His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658398 H3K4me1|Granulocytes His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658397 H3K4me1|Erythrocytes B (Ery B) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658396 H3K4me1|Erythrocytes A (Ery A) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658395 H3K4me1|Megakaryocitic erythroyd progenitor (MEP) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658394 H3K4me1|Granulocyte Monocyte Progenitor (GMP) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658393 H3K4me1|Common Myeloid Progenitor (CMP) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658392 H3K4me1|Multipotent Progenitor (MPP) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658391 H3K4me1|Short Term Hematopoietic Stem Cell (ST-HSC) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658390 H3K4me1|Long Term Hematopoietic Stem Cell (LT-HSC) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658389 H3K27Ac|Common Lymphoid Progenitor (CLP) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658388 H3K27Ac|NK Cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658387 H3K27Ac|T CD8+ cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658386 H3K27Ac|T CD4+ cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658385 H3K27Ac|B cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658384 H3K27Ac|Bone Marrow Macrophages His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658383 H3K27Ac|Monocytes His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658382 H3K27Ac|Granulocytes His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658381 H3K27Ac|Erythrocytes B (Ery B) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658380 H3K27Ac|Erythrocytes A (Ery A) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658379 H3K27Ac|Megakaryocitic erythroyd progenitor (MEP) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658378 H3K27Ac|Granulocyte Monocyte Progenitor (GMP) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658377 H3K27Ac|Common Myeloid Progenitor (CMP) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658376 H3K27Ac|Multipotent Progenitor (MPP) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658375 H3K27Ac|Short Term Hematopoietic Stem Cell (ST-HSC) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX658374 H3K27Ac|Long Term Hematopoietic Stem Cell (LT-HSC) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX657175 R6_striatum_Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX657170 WT_striatum_Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX657155 None|None|Embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX657154 Med1/TRAP220|Santa Cruz SC-5334|Embryonic stem cells Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX657153 Med1/TRAP220|Bethyl A300-793A|Embryonic stem cells Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX657144 None|None|Mouse embryonic fibroblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX655370 ROR alpha|RORalpha (Santa Cruz, sc-6062)|liver Oth@ Rora 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX655369 E4BP4|E4BP4 (Santa Cruz, sc-9550 and sc-9549, mixed in 1:1 ratio.)|liver Oth@ Nfil3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX652260 V5-4|Doxycycline treated iER71, ES cell Oth@ Etv2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX652259 V5-1|Doxycycline treated iER71, ES cell Oth@ Etv2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX652258 IgG|Doxycycline treated iER71, ES cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX652257 pAb-2|Doxycycline treated iER71, ES cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX652256 pAb-1|Doxycycline treated iER71, ES cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX652255 pAb-0|No doxycycline treated iER71, ES cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX652179 none (input)|mouse embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX652178 anti-Pwp1|sc-107983|mouse embryonic stem cells Oth@ Pwp1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX651987 anti-Med12 (Bethyl #A300-774A)|mouse embryonic stem cells Oth@ Med12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX651986 anti-Med1 (CRSP1/TRAP220) (Bethyl #A300-793A)|mouse embryonic stem cells Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX651984 anti-Sox2 (Santa Cruz #sc-17320)|mouse embryonic stem cells Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX651982 anti-Nanog (D2A3) XP (Cell Signaling #8822)|mouse embryonic stem cells Oth@ Nanog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX651981 anti-Oct3/4 (N-19) (Santa Cruz #sc-8628)|mouse embryonic stem cells Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX648718 Rad21|Apc Min small intestinal adenoma Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX648717 Apc Min small intestinal adenoma Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX648716 Rad21|WT small intestinal crypts Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX648715 WT small intestinal crypts Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX648578 mES Cells ATRX Knockout Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX648577 mES Cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX648576 Millipore 09-838|mES Cells ATRX Knockout His@ H3.3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX648575 Millipore 09-838|mES Cells His@ H3.3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX646167 Rabbit polyclonal anti-mouse NLRC5 (aa 1139) custom antibody generated by Adipogen|Rfx5-/- T-cells Oth@ Nlrc5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX646166 Rabbit polyclonal anti-mouse NLRC5 (aa 1139) custom antibody generated by Adipogen|Nlrc5-/- T-cells Oth@ Nlrc5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX646165 Rabbit polyclonal anti-mouse NLRC5 (aa 1139) custom antibody generated by Adipogen|Nlrc5F/F T-cells Oth@ Nlrc5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX597216 H3K4me1_repeat_2|3T3L1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX597215 H3K4me1_repeat_1|3T3L1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX597214 H3K36me3_repeat_2|3T3L1 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX597213 H3K36me3_repeat_1|3T3L1 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX597212 H3K27me3_repeat_2|3T3L1 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX597211 H3K27me3_repeat_1|3T3L1 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX595845 anti-RPB2, Santa Cruz Biotechnology, sc-673-18|liver Pol@ Polr2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX591741 Histone H3, C-terminal antibody (pAb)|miwi2KO_GermCellsTestis_MACS_H3 His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX591739 Histone H3, C-terminal antibody (pAb)|miwi2HET_GermCellsTestis_MACS_H3 His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX591711 a-H3K9me3|miwi2KO_GermCellsTestis_FACS_H3K9me3 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX591710 miwi2KO_GermCellsTestis_FACS_inputDNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX591709 a-H3K9me3|miwi2HET_GermCellsTestis_FACS_H3K9me3 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX591708 miwi2HET_GermCellsTestis_FACS_inputDNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX589568 Input|WT_Retinoic acid treated ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX589563 Input|WT_ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX587740 none|Hoxa9/Meis1-transformed HSCs_input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX587739 anti-H3K27me3|Hoxa9/Meis1-transformed HSCs_ChIP-seq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX587738 anti-H3K4me1|Hoxa9/Meis1-transformed HSCs_ChIP-seq His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX587737 anti-C/EBP|Hoxa9/Meis1-transformed HSCs_ChIP-seq Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX587736 anti-HA|Hoxa9/Meis1-transformed HSCs_ChIP-seq Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX587733 WCE|none|mouse adipocyte InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX587732 Ebf1|anti-Ebf1 antibody (Abnova H00001879-M01)|mouse adipocyte Oth@ Ebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX583299 Zfp335/NIF1 (A300-798A, Bethyl Laboratories, lot no. A300-798A-1)|thymocytes, blt/blt, Zfp335/NIF1 ChIP Oth@ Zfp335 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX583298 Zfp335/NIF1 (A300-798A, Bethyl Laboratories, lot no. A300-798A-1)|thymocytes, WT, Zfp335/NIF1 ChIP Oth@ Zfp335 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX583297 Zfp335/NIF1 (A300-797A, Bethyl Laboratories, lot no. A300-797A-1)|thymocytes, blt/blt, Zfp335/NIF1 ChIP Oth@ Zfp335 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX583296 Zfp335/NIF1 (A300-797A, Bethyl Laboratories, lot no. A300-797A-1)|thymocytes, WT, Zfp335/NIF1 ChIP Oth@ Zfp335 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX583295 none|thymocytes, blt/blt, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX583294 none|thymocytes, WT, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX581837 none (input)|Embryonic stem cells (J1) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX581836 Custom rabbit anti-KAP1 antibody, 5ug per IP|Embryonic stem cells (J1) Oth@ Trim28 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX581835 none (input)|Embryonic stem cells (ES3) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX581834 Mouse anti-HA antibody (Covance, catalog# MMS-101P)|Embryonic stem cells (ES3) Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX555896 v5 control ChIP-seq in CGR8 Embryonic Stem Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX555895 v5-Dppa2 ChIP-seq in CGR8 Embryonic Stem Cells Oth@ Dppa2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX555533 none|mouse primary hepatocyte InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX555532 NUCKS (Rabbit polyclonal antibody is generated by i-DNA Biotechnology Pte Ltd by immunizing rabbits with bacterially expressed full-length NUCKS protein)|mouse primary hepatocyte Oth@ Nucks1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX555508 panH3 (Abcam ab1791, lot# 940378)|Sperm, PanH3 ChIP His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX555507 none|Sperm, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX554976 none (input)|In vitro activated CD8 T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX554975 Anti-PolII-S5|Abcam|ab5131|In vitro activated CD8 T cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX554974 Anti-PolII-S2|Abcam|ab5095|In vitro activated CD8 T cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX554973 Anti-Myc|Santa Cruz|sc-764|In vitro activated CD8 T cells Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX554972 Anti-AP4|in house|In vitro activated CD8 T cells Oth@ Tfap4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX551035 H3K27me3|Abcam AB6002|Embryonic stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX547099 none|P12_Liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX547098 HNF4A (Santa Cruz sc-8987 X)|E18_Liver Oth@ Hnf4a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX547093 H3K4me3 ((Millipore 04-745)|P12_Liver His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX547092 H3K4me3 (Millipore 04-745)|P12_Liver His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX545932 Input_KO_P22 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX545931 Input_WT_P22 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543059 H3K27Ac|70Z3 ChIP-Seq H3K27Ac His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543058 H3K9Ac|70Z3 ChIP-Seq H3K9Ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543057 H3K4Me3|70Z3 ChIP-Seq H3K4Me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543056 rabbit anti-Miz-1|70Z3 ChIP-Seq Miz1 Oth@ Zbtb17 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543055 70Z3 ChIP-Seq Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543051 H3K27Ac|P6D4 ChIP-Seq H3K27Ac His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543050 H3K9Ac|P6D4 ChIP-Seq H3K9Ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543049 H3K4Me3|P6D4 ChIP-Seq H3K4Me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543048 rabbit anti-Miz-1|P6D4 ChIP-Seq Miz1 Oth@ Zbtb17 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX543047 P6D4 ChIP-Seq Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542621 MacroH2A2 antibody, Abcam ab4173|embryonic fibroblasts His@ macroH2A2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542620 MacroH2A2 antibody, Abcam ab4173|Embryonic Stem Cells His@ macroH2A2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542105 No antibody|ChIPseq WT WCE InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542104 FLAG antibody F1804, SIGMA|ChIPseq WT IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542103 No antibody|dmCas9-ChIPseq sgRNA p53-3 WCE InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542102 FLAG antibody F1804, SIGMA|dmCas9-ChIPseq sgRNA p53-3 IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542101 No antibody|dmCas9-ChIPseq No sgRNA WCE InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542100 No antibody|dmCas9-ChIPseq sgRNA p53-1 WCE InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542099 FLAG antibody F1804, SIGMA|dmCas9-ChIPseq No trgRNA IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX542098 FLAG antibody F1804, SIGMA|dmCas9-ChIPseq sgRNA p53-1 IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX540702 PU.1 ( Santa Cruz, sc-352)|Plasmacytoid dendritic cell (pDC) Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX540701 PU.1 ( Santa Cruz, sc-352)|Classical dendritic cell (cDC) Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX540700 PU.1 ( Santa Cruz, sc-352)|Common dendritic cell progenitor (CDP) Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX540699 PU.1 ( Santa Cruz, sc-352)|Multipotent progenitor (MPP) Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX540686 H3K4me1 (Abcam, ab8895)|Plasmacytoid dendritic cell (pDC) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX540685 H3K4me1 (Abcam, ab8895)|Classical dendritic cell (cDC) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX540684 H3K4me1 (Abcam, ab8895)|Common dendritic cell progenitor (CDP) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX540683 H3K4me1 (Abcam, ab8895)|Multipotent progenitor (MPP) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX535299 Abcam, ab8580|KO MEF His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX535298 Abcam, ab8580|WT MEF His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX535264 embryonic stem cells, 75 uM DRB, 10 h Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX535242 N/A|Epiblast stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX535241 H3K27me3 (Abcam #6002)|Epiblast stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX535240 H3K27ac (Abcam #4729)|Epiblast stem cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX535239 H3K4me3 (Active Motif #39159)|Epiblast stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX535238 H3K4me1 (Abcam #8895)|Epiblast stem cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX530905 none|p53KORasV12 MEF, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX530904 rabbit polyclonal anti-E4F1|p53KORasV12 MEF, E4F1 ChIP Oth@ E4f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX530903 none|MEF, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX530902 rabbit polyclonal anti-E4F1|MEF, E4F1 ChIP Oth@ E4f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX530049 TS cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX530048 anti-H2A.X|TS cell His@ H2A.X 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX529401 none|Neural Progenitor Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX529266 none|lung InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX529265 Smad4 R&D Systems, cat.# AF2097, Lot# KUH0311081|lung Oth@ Smad4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX528869 GSK3beta|Mouse Embryonic Fibroblasts Oth@ Gsk3b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX528335 H3K27ac|Hematopoietic progenitors His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX527857 none (Input)|Neural precursors cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX527844 -EGFP (invitrogen, A11122)|Embryonic Stem cells Oth@ GFP 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX522663 none (input)|myoblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX522662 Santa Cruz sc-13450, Lot D1911|myoblasts Oth@ Foxk1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX522661 Hassig, C. A. et al. Cell 89, 341347 (1997)|myoblasts Oth@ Sin3a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX521636 H3K27me3|Mouse embryonic day 11.5 (e11.5) forebrain His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX521635 H3K4me3|Mouse embryonic day 11.5 (e11.5) forebrain His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX521634 H3K4me1|Mouse embryonic day 11.5 (e11.5) forebrain His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX521633 input|Mouse embryonic day 11.5 (e11.5) forebrain InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX521632 H3K27ac|Mouse embryonic day 11.5 (e11.5) limb His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX521630 H3K27me3|Mouse embryonic day 11.5 (e11.5) limb His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX521629 H3K4me3|Mouse embryonic day 11.5 (e11.5) limb His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX521628 H3K4me1|Mouse embryonic day 11.5 (e11.5) limb His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520480 anti-panRXR (Santa Cruz, Sc-553)|F9 cells, RA, 48h, RXR ChIP Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520479 anti-panRAR (Santa Cruz, Sc-773)|F9 cells, RA, 48h, RAR ChIP Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520475 anti-panRXR (Santa Cruz, Sc-553)|F9 cells, RA, 24h, RXR ChIP Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520474 anti-panRAR (Santa Cruz, Sc-773)|F9 cells, RA, 24h, RAR ChIP Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520469 anti-panRXR (Santa Cruz, Sc-553)|F9 cells, RA, 2h, RXR ChIP Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520468 anti-panRAR (Santa Cruz, Sc-773)|F9 cells, RA, 2h, RAR ChIP Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520463 anti-panRXR (Santa Cruz, Sc-553)|F9 cells, RA, 0h, RXR ChIP Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520462 anti-panRAR (Santa Cruz, Sc-773)|F9 cells, RA, 0h, RAR ChIP Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520461 none|F9 cells, RA, 0h, total chromatin InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520213 BRG1|3T3-L1 pre-adipocytes (4h) Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520212 p300 (N-15)|3T3-L1 pre-adipocytes (4h) Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520202 RXR (N-197)|3T3-L1 pre-adipocytes (4h) Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520201 VDR (C-20)|3T3-L1 pre-adipocytes (4h) Oth@ Vdr 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520200 STAT1 (E-23)|3T3-L1 pre-adipocytes (4h) Oth@ Stat1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520199 PBX1|3T3-L1 pre-adipocytes (4h) Oth@ Pbx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520198 KLF5|3T3-L1 pre-adipocytes (4h) Oth@ Klf5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520197 KLF4 (H-180)|3T3-L1 pre-adipocytes (4h) Oth@ Klf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520196 JunB (210)|3T3-L1 pre-adipocytes (4h) Oth@ Junb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520195 FOSL2 (L-15)|3T3-L1 pre-adipocytes (4h) Oth@ Fosl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520194 cJun (H79)|3T3-L1 pre-adipocytes (4h) Oth@ Jun 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520193 ATF7 (S-15)|3T3-L1 pre-adipocytes (4h) Oth@ Atf7 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX520192 ATF2 (N-96)|3T3-L1 pre-adipocytes (4h) Oth@ Atf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX518335 NFYC: Santa-cruz, NF-YC (N-19)X, sc-7715X, Rabbit polyclonal|E14Tg2a ES Cells Oth@ Nfyc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX518334 NFYB: Santa-cruz, NF-YB (FL-207)X, sc-13045X, Rabbit polyclonal|E14Tg2a ES Cells Oth@ Nfyb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX518333 NFYA: Santa-cruz, NF-YA (G-2)X, sc-17753X, Mouse monoclonal IgG2a|E14Tg2a ES Cells Oth@ Nfya 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX518332 none|E14Tg2a ES Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX517514 None|whole heart InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX516186 none|Primary gd T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX516185 Rabbit Notch1 mAb (D1E11, Cell Signaling Technology)|Primary gd T cells Oth@ Notch1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515671 FOSL2|sc-13017x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte FOSL2 untreated Oth@ Fosl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515670 JUND|sc-74x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte JUND untreated Oth@ Jund 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515669 ATF2|sc-6233x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte ATF2 untreated Oth@ Atf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515668 CEBPb|sc-150x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte CEBPb untreated Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515667 CEBPa|sc-61x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte CEBPa untreated Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515666 NCOR rosi treated|rabbit polyclonal, generated in-lab|ChIP-seq, 3T3-L1 adipocyte NCOR rosi treated Oth@ Ncor1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515665 NCOR|rabbit polyclonal, generated in-lab|ChIP-seq, 3T3-L1 adipocyte NCOR untreated Oth@ Ncor1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515664 p300 rosi treated|sc-585x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte p300 rosi treated Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515663 p300|sc-585x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte p300 untreated Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515662 CBP rosi treated|sc-369x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte CBP rosi treated Oth@ Crebbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515661 CBP|sc-369x, Santa Cruz|ChIP-seq, 3T3-L1 adipocyte CBP untreated Oth@ Crebbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515660 MED1|A300-793A, Bethyl|ChIP-seq, 3T3-L1 adipocyte MED1 rosi treated, replicate 2 Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515659 MED1|A300-793A, Bethyl|ChIP-seq, 3T3-L1 adipocyte MED1 untreated, replicate 2 Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515658 3T3-L1 adipocyte input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515657 MED1|A300-793A, Bethyl|ChIP-seq, 3T3-L1 adipocyte MED1 rosi treated, replicate 1 Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515656 MED1|A300-793A, Bethyl|ChIP-seq, 3T3-L1 adipocyte MED1 untreated, replicate 1 Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515504 normal goat serum (negative control)|mock ChIP from spermatocytes heat shocked at 43C InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515503 normal goat serum (negative control)|mock ChIP from spermatocytes heat shocked at 38C InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515502 normal goat serum (negative control)|mock ChIP from untreated spermatocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515501 anti-HSF2 (cat. no AF5227, R&D Systems)|HSF2 ChIP DNA from spermatocytes heat shocked at 43C Oth@ Hsf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515500 anti-HSF2 (cat. no AF5227, R&D Systems)|HSF2 ChIP DNA from spermatocytes heat shocked at 38C Oth@ Hsf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515499 anti-HSF2 (cat. no AF5227, R&D Systems)|HSF2 ChIP DNA from untreated spermatocytes Oth@ Hsf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515498 anti-HSF1 (cat. no SPA-901, Enzo)|HSF1 ChIP DNA from spermatocytes heat shocked at 43C Oth@ Hsf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515497 anti-HSF1 (cat. no SPA-901, Enzo)|HSF1 ChIP DNA from spermatocytes heat shocked at 38C Oth@ Hsf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX515496 anti-HSF1 (cat. no SPA-901, Enzo)|HSF1 ChIP DNA from untreated spermatocytes Oth@ Hsf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX505089 None|Ventral Proliferating neural stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX505088 H3K4me3 Active Motif 39159|Ventral Proliferating neural stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX505087 None|Proliferating Neural Stem Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX505086 H3K27me3 Millipore 07-449|Proliferating Neural Stem Cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX505085 None|30 hr differentiation Neural Stem Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX505084 H3K27me3 Millipore 07-449|30 hr differentiation Neural Stem Cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX505082 N/A|primary Rag2 -/- thymocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX504227 Cardiomyocytes Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX504226 H3K27ac|Cardiomyocytes His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX504225 H3K4me1|Cardiomyocytes His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX501738 endoderm Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX501737 anti-V5 (Abcam, ab15828)|endoderm Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX500852 H3K27me3|WT 8 days after dox induction His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX500195 KO MEF_input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX500193 WT MEF_input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX498210 Esrrb (H6705, Perseus Proteomics)|ZHBTc4 ES cells, +Tet, Day 4 Oth@ Esrrb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX498209 Esrrb (H6705, Perseus Proteomics)|ZHBTc4 ES cells, +Tet, Day 3 Oth@ Esrrb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX498208 Esrrb (H6705, Perseus Proteomics)|ZHBTc4 ES cells, +Tet, Day 2 Oth@ Esrrb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX498207 Esrrb (H6705, Perseus Proteomics)|ZHBTc4 ES cells, +Tet, Day 1 Oth@ Esrrb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX498206 Esrrb (H6705, Perseus Proteomics)|ZHBTc4 ES cells, untreated Oth@ Esrrb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX498122 H3K27me3 (Millipore, 07-449)|DNMT triple knockout ESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX495632 Rabbit Anti-Foxp3( Nature. 2007;445:936-40.|iTreg cells Oth@ Foxp3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX495631 Rabbit Anti-Foxp3( Nature. 2007;445:936-40.|EL4 cells Oth@ Foxp3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX495621 rat IgG2a, eBioscience, 14-6988,|Th17 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX490477 IgG|EB-Motor neuron, WT, IgG control ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX490476 TAF9B|EB-Motor neuron, WT, TAF9B ChIP Oth@ Taf9b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX490475 RNA Pol2|EB-Motor neuron, WT, RNA Pol2 ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX487087 H3K4me3|p30-GMP-blast cells, Biological repl_III, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX487086 H3K4me3|p30-GMP-blast cells, Biological repl_II, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX487085 H3K27me3|p30-GMP-blast cells, Biological repl_II, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX487084 H3K27me3|p30-GMP-blast cells, Biological repl_I, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX487079 CEBPA|p30-GMP-blast cells, Biological repl_II, CEBPA ChIP Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX487078 CEBPA|p30-GMP-blast cells, Biological repl_I, CEBPA ChIP Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX485442 Lab generated rabbit anti-Rbpj|E12.5 Neural Tube Oth@ Rbpj 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX485439 BD Pharmigen mouse anti-Ascl1 (catalog# 556604)|E12.5 Neural Tube Oth@ Ascl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484327 RNAPIIS2ph (Bethyl, cat number A300-654A)|RNAPIIS2ph, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 2 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484326 RNAPIIS2ph (Bethyl, cat number A300-654A)|RNAPIIS2ph, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 1 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484325 RNAPIIS2ph (Bethyl, cat number A300-654A)|RNAPIIS2ph, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 2 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484324 RNAPIIS2ph (Bethyl, cat number A300-654A)|RNAPIIS2ph, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 1 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484323 RNAPIIS5ph (Bethyl, cat number A300-655A)|RNAPIIS5ph, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 2 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484322 RNAPIIS5ph (Bethyl, cat number A300-655A)|RNAPIIS5ph, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 1 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484321 RNAPIIS5ph (Bethyl, cat number A300-655A)|RNAPIIS5ph, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 2 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484320 RNAPIIS5ph (Bethyl, cat number A300-655A)|RNAPIIS5ph, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 1 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484319 H3K4me3 (Millipore, cat number 07-473)|H3K4me3, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 2 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484318 H3K4me3 (Millipore, cat number 07-473)|H3K4me3, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 1 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484317 H3K4me3 (Millipore, cat number 07-473)|H3K4me3, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 2 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484316 H3K4me3 (Millipore, cat number 07-473)|H3K4me3, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 1 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484315 H3K9ac (Millipore, cat number 06-942)|H3K9ac, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 2 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484314 H3K9ac (Millipore, cat number 06-942)|H3K9ac, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 1 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484313 H3K9ac (Millipore, cat number 06-942)|H3K9ac, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 2 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484312 H3K9ac (Millipore, cat number 06-942)|H3K9ac, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 1 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484311 H3S28ph (Sigma, cat number H9908)|H3S28ph, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 2 His@ H3S28ph 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484310 H3S28ph (Sigma, cat number H9908)|H3S28ph, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM), replicate 1 His@ H3S28ph 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484309 H3S28ph (Sigma, cat number H9908)|H3S28ph, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 2 His@ H3S28ph 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484308 H3S28ph (Sigma, cat number H9908)|H3S28ph, Serum-starved (72h) Swiss 3T3 fibroblasts, replicate 1 His@ H3S28ph 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484307 none|Input, Serum-starved (72h) Swiss 3T3 fibroblasts, 1h anisomycin treated (188.5 nM) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484306 none|Input, Serum-starved (72h) Swiss 3T3 fibroblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX484257 None|Activated Treg InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX483599 p53|Mouse embryonic fibroblasts Oth@ Trp53 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX483598 input|Mouse embryonic fibroblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX482054 Bio-Tdg cells|ESC E14 Oth@ Tdg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX482053 BirA cells (mock)|ESC E14 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX481629 Jarid2 K116me2 IP (this study, Sanulli et al.)|embryonic stem cells Oth@ Jarid2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX481628 Jarid2 IP (Li et al. Gene & development 2010)|embryonic stem cells Oth@ Jarid2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475946 antiH3K36me3 Abcam (Cat #: ab9050,Lot #: GR66372-1)|Dcr Knockout mouse embryonic stem cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475945 antiH3K4me3 Abcam (Cat #: ab8580, Lot #: GR87168-1)|Dcr Knockout mouse embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475944 antiH3K36me3 Abcam (Cat #: ab9050,Lot #: GR66372-1)|Dcr Wild type mouse embryonic stem cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475943 antiH3K4me3 Abcam (Cat #: ab8580, Lot #: GR87168-1)|Dcr Wild type mouse embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475806 rabbit polyclonal anti-Atf3 antibody|Atf3_HDL_CpG_KO Oth@ Atf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475805 rabbit polyclonal anti-Atf3 antibody|Atf3_HDL_CpG_wildtype Oth@ Atf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475804 rabbit polyclonal anti-Atf3 antibody|Atf3_HDL_KO Oth@ Atf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475803 rabbit polyclonal anti-Atf3 antibody|Atf3_HDL_wildtype Oth@ Atf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475802 rabbit polyclonal anti-Atf3 antibody|Atf3_Unstim_KO Oth@ Atf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475801 rabbit polyclonal anti-Atf3 antibody|Atf3_Unstim_wildtype Oth@ Atf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX475276 IgG (Sigma, catalog# I8140, lot# 115k7551)|c-kit+ bone marrow cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX474721 none|A2lox FMsgn1 embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX474720 anti-Flag M2 (Sigma, Cat#F3165)|A2lox FMsgn1 embryonic stem cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX474259 H3K27me3 (#17-622, Millipore)|Pre-somitic mesoderm E8.5 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX474258 H3K4me3 (#17-614, Millipore)|Pre-somitic mesoderm E8.5 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX474257 H3K27me3 (#17-622, Millipore)|ES cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX474256 H3K4me3 (#17-614, Millipore)|ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX472713 PARP-1 (rabbit polyclonal anti-PARP, ab6079)|Nucleus accumbens tissue Oth@ Parp1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX472711 none|Nucleus accumbens tissue InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX472604 mast Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX472603 HPC7 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX472461 none|Maxillary arch Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX472460 H3K27Ac antibody (Active Motif, cat# AM 39133)|Maxillary arch Cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX471839 none (input)|Cultured germline stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX471838 Mouse anti-Bmi1 (Millipore, catalog#05-637, lot#2019726)|Cultured germline stem cells Oth@ Bmi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX471837 Mouse anti-Rnf2 (MBL, catalog#D139-3, lot#014)|Cultured germline stem cells Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX471836 Rabbit anti-Scml2 (produced in-house; Hasegawa et al.)|Cultured germline stem cells Oth@ Scml2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX470250 Anti-Brachyury antibody Rabbit #2, Custom-made, rabbits were immunized with Brachyury residues 249-436 GST fusion protein|ES cell derived Mesoendoderm Cells Oth@ T 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX470249 Anti-Brachyury antibody Rabbit #1, Custom-made, rabbits were immunized with Brachyury residues 249-436 GST fusion protein|ES cell derived Mesoendoderm Cells Oth@ T 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX470248 pre-immune IgG|ES cell derived Mesoendoderm Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX470210 Anti-Brachyury antibody, Custom-made, rabbits were immunized with Brachyury residues 249-436 GST fusion proteins|ES cell derived Mesoendoderm Cells Oth@ T 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX470036 none|Rif1 knockdown ESCs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX470035 Abcam ab8898|Rif1 knockdown ESCs His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX470034 none|Control ESCs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX470033 Abcam ab8898|Control ESCs His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX469920 Anti-acetyl-Histone H3|TSA H3Ac_ChIP-seq His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX469919 Anti-acetyl-Histone H3|DMSO H3Ac_ChIP-seq His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467561 H3K27me3|07-449|Trimethylated histone H3 (Lys27). Broad species cross-reactivity expected.|rabbit polyclonal. Antibody Target: H3K27me3|MEL His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467484 Input|Cytokine independent|106A cell line InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467483 H3K4me3|Cytokine independent|106A cell line His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467482 H3K27me3|Cytokine independent|106A cell line His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467481 Input|Cytokine independent|961C cell line InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467480 NP23|Cytokine independent|961C cell line Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467479 H3K4me3|Cytokine independent|961C cell line His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467478 H3K27me3|Cytokine independent|961C cell line His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467477 Input|Cytokine independent|748T cell line InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467476 H3K4me3|Cytokine independent|748T cell line His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467475 H3K27me3|Cytokine independent|748T cell line His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467474 Input|Cytokine independent|7298/2 cell line InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467473 H3K4me3|Cytokine independent|7298/2 cell line His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467472 H3K27me3|Cytokine independent|7298/2 cell line His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467387 None|Input_IDGSW3_d35 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467386 None|Input_IDGSW3_d3 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467385 H3K9me3|H3K9me3_IDGSW3_d35 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467384 H3K36me3|H3K36me3_IDGSW3_d35 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467383 H4K20me1|H4K20me1_IDGSW3_d35 His@ H4K20me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467382 H3K9Ac|H3K9Ac_IDGSW3_d35 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467381 H4K5Ac|H4K5Ac_IDGSW3_d35 His@ H4K5ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467380 H3K27Ac|H3K27Ac_IDGSW3_d35 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467379 H3K4me3|H3K4me3_IDGSW3_d35 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467378 H3K4me2|H3K4me2_IDGSW3_d35 His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467377 H3K4me1|H3K4me1_IDGSW3_d35 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467376 H3K9me3|H3K9me3_IDGSW3_d3 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467375 H3K36me3|H3K36me3_IDGSW3_d3 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467374 H4K20me1|H4K20me1_IDGSW3_d3 His@ H4K20me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467373 H3K9Ac|H3K9Ac_IDGSW3_d3 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467372 H4K5Ac|H4K5Ac_IDGSW3_d3 His@ H4K5ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467371 H3K27Ac|H3K27Ac_IDGSW3_d3 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467370 H3K4me3|H3K4me3_IDGSW3_d3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467369 H3K4me2|H3K4me2_IDGSW3_d3 His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467368 H3K4me1|H3K4me1_IDGSW3_d3 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467339 None|SRC-2OE/+ prostate InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX467338 SRC-2 (A300-346A, Bethyl Lab., Inc.)|SRC-2OE/+ prostate Oth@ Ncoa2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX466438 anti-HA|No-sgRNA-IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX466437 anti-HA|Nanog-sg3-IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX466436 anti-HA|Nanog-sg2-IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX466435 anti-HA|Phc1-sg2-IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX466434 anti-HA|Phc1-sg1-IP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX451805 HNF4a SantaCruz H191 sc-8987 lot #J1003|Dlk1+ hepatoblasts Oth@ Hnf4a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX451714 MLL3|Growing C1C12 myoblasts Oth@ Kmt2c 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX451713 LSD1|C1C12 myotubes differentiated for 96h Oth@ Kdm1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX451712 LSD1|Growing C1C12 myoblasts Oth@ Kdm1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450830 Sox9 Ab|IFE_Sox9_ChIPSeq Oth@ Sox9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450829 none|IFE_input DNA_ChIP-Seq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450828 Sox9 Ab|HFSC_Sox9_ChIPSeq Oth@ Sox9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450826 Sox9 Ab|HFSC_Sox9_ChIP-Seq Oth@ Sox9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450332 p65|BMM_NoStim_0000_P65 Oth@ Rela 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450331 p65|BMM_LPS_0120_P65 Oth@ Rela 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450330 p65|BMM_LPS_0060_P65 Oth@ Rela 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450329 Methylated Histone H3K27me3|BMM_LPS_0060_7hdelay_meH3K27 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450328 Methylated Histone H3K27me3|BMM_LPS_0480_meH3K27 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450325 Methylated Histone H3K27me3|BMM_NoStim_0000_meH3K27 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450324 Anti-RNA polymerase II, clone CTD4H8|BMM_LPS_0360_PolII Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450323 Anti-RNA polymerase II, clone CTD4H8|BMM_LPS_0120_PolII Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450321 Anti-RNA polymerase II, clone CTD4H8|BMM_NoStim_0000_PolII Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450320 Methylated Histone H3K27me3|BMM_LPS_0240_meH3K27 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX450319 Methylated Histone H3K27me3|BMM_LPS_0120_meH3K27 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX445036 IgG|pancreatic beta cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX445035 Foxa2 (sc-6554, Santa Cruz Biotechnology)|pancreatic beta cells Oth@ Foxa2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX445034 Neurod1 (#4373, Cell Signaling Technology, Danvers, MA)|pancreatic beta cells Oth@ Neurod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX445033 Insm1 (Welcker et al , 2013)|pancreatic beta cells Oth@ Insm1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX442884 Prep1(N-15X) (Santa Cruz Biotechnology, sc-6245X, lot# F2003)|Embryonic fibroblast Oth@ Pknox1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX437638 none|cornea InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX437464 Normal Rabbit IgG (Life Technologies, 10500C, Lot 939223A)|In vitro effector CD8+ T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX437451 JunD (329) (Santa Cruz, sc-74, Lot I1510)|In vitro effector CD8+ T cells Oth@ Jund 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX437450 JunB (210) (Santa Cruz, sc-73, Lot D2610)|In vitro effector CD8+ T cells Oth@ Junb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX437449 cJun (N) (Santa Cruz, sc-45, Lot K3010)|In vitro effector CD8+ T cells Oth@ Jun 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX433130 Anti-Sox2 (R&D Systems, Cat. # AF2018, Lot # KOY0112011)|Embryonic Stem Cells Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX429086 Laminin B (Santa-Cruz, California)|Neural Retina Oth@ Lmnb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX429085 OTX2 (R&D systems, Minneapolis, MN, USA)|Neural Retina Oth@ Otx2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX429083 GFP (Abcam, Cambridge, UK)|RPE Oth@ GFP 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX429082 Laminin B (Santa-Cruz, California)|RPE Oth@ Lmnb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX429081 OTX2 (R&D systems, Minneapolis, MN, USA)|RPE Oth@ Otx2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX426375 IgG|ES E14 mouse cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX425486 Runx2 antibody (M70, Santa Cruz Biotechnologies, Inc.)|mineralizing MC3T3-E1 subclone 4 cells at day 28 Oth@ Runx2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX425485 Runx2 antibody (M70, Santa Cruz Biotechnologies, Inc.)|matrix-depositing MC3T3-E1 subclone 4 cells at day 9 Oth@ Runx2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX425484 Runx2 antibody (M70, Santa Cruz Biotechnologies, Inc.)|proliferating preosteoblast MC3T3-E1 subclone 4 cells at day 0 Oth@ Runx2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX425483 none|matrix-depositing MC3T3-E1 subclone 4 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX424873 control IgG|HC11 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX424872 antibody against Ovol2|HC11 Oth@ Ovol2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX424020 IgG|mouse embryonic fibroblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX424009 IgG|Conditional Jmjd2c knockout ESCs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX415268 Menin|KJ1+ transferred CD4 T cells Oth@ Men1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX415267 Menin|KJ1+ naive CD4 T cells Oth@ Men1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX415003 CRY1|Liver Oth@ Cry1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404387 Nsl1|mESCs Oth@ Nsl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404386 Msl1|mESCs Oth@ Msl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404310 none|EGFP-TS3.5 TS cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404309 none|ZHBTc4-TS cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404308 Sox2 raised by ourselves|EGFP-TS3.5 TS cells Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404307 Cdx2 (CDX2-88, BioGenex)|ZHBTc4-TS cells Oth@ Cdx2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404306 Tfap2c (sc-8977, Santa Cruz)|ZHBTc4-TS cells Oth@ Tfap2c 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404305 Sox2 raised by ourselves|ZHBTc4-TS cells Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX404070 none|KH2 mouse embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX403487 none|MECs, p13, no treatment, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX403486 H3K4me3|MECs, control, p13, no treatment, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX403485 H3K4me3|MECs, E2KO, p13, no treatment, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX403483 Stat5|mammary tissues, control, p13, no treatment, Stat5 ChIP Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX403482 Stat5|mammary tissues, E2KO, p13, no treatment, Stat5 ChIP Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX403480 H3K27me3|mammary tissues, control, p13, no treatment, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX403479 H3K27me3|mammary tissues, E2KO, p13, no treatment, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398488 none|Liver tissue, pooled, 3 months, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398487 H3K27me3 (in-house antibody by Active Motif, Carlsbad, CA)|Liver tissue, DKO, 3 months, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398486 H3K27me3 (in-house antibody by Active Motif, Carlsbad, CA)|Liver tissue, E2KO, 3 months, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398485 H3K27me3 (in-house antibody by Active Motif, Carlsbad, CA)|Liver tissue, E1KO, 3 months, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398484 H3K27me3 (in-house antibody by Active Motif, Carlsbad, CA)|Liver tissue, WT, 3 months, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398483 H3K4me3 (in-house antibody by Active Motif, Carlsbad, CA)|Liver tissue, DKO, 3 months, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398482 H3K4me3 (in-house antibody by Active Motif, Carlsbad, CA)|Liver tissue, E2KO, 3 months, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398481 H3K4me3 (in-house antibody by Active Motif, Carlsbad, CA)|Liver tissue, E1KO, 3 months, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398480 H3K4me3 (in-house antibody by Active Motif, Carlsbad, CA)|Liver tissue, WT, 3 months, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398240 n.a.|Pre-pro-B cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398234 n.a.|DP-T cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398232 n.a.|DN3 cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398230 anti IRF4 (M-17), Santa Cruz sc-6059x, lot:E0608|Pro-B cell Oth@ Irf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX398228 anti V5 (clone V5-10)-agarose, Sigma A7345|Pro-B cell Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX397012 Zrf1 Ab generated in Di Croces lab|Neural Progenitor cell (NPC) Oth@ Dnajc2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX397011 Rabbit IgG Abcam, ab37415|Neural Progenitor cell (NPC) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX397010 Ring1B Ab generated in Di Croces lab|Neural Progenitor cell (NPC) Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX396750 none|MECs (mammary epithelial cells), p13, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX396749 H3K4me3 (Millipore, 17-614, lot# 2055519)|MECs (mammary epithelial cells), p13, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX396748 STAT5A (Santa Cruz, sc-1081, lot# J3007)|Mammary gland tissues, p13, STAT5A ChIP Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX396747 none|Mammary gland tissues, p13, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX396746 STAT5A (Santa Cruz, sc-1081, lot# J3007)|Mammary gland tissues, L1, STAT5A ChIP Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX396745 none|Mammary gland tissues, L1, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX396744 H3K4me3 (Millipore, 17-614, lot# 2055519)|Mammary gland tissues, L1, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX396312 anti-YY1 (Santa Cruz, catalog# SC-1703, lot# E0511)|jejunal crypt intestinal epithelial cells Oth@ Yy1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX390506 anti-JunB (Santa Cruz Biotechnology, sc-73x (210x), Lot# D1210)|BMDCs, LPS, 6 hrs, JunB ChIP Oth@ Junb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX390505 anti-BATF (in-house)|BMDCs, LPS, 6 hrs, BATF ChIP Oth@ Batf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX390504 anti-PU.1 (Santa Cruz Biotechnology, sc-352x (T-21x), Lot# J2411)|BMDCs, LPS, 6 hrs, PU.1 ChIP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX390396 SMAD2/3 (R&D Systems, AF3797, lot XHY01)|ESC-derived endoderm Oth@ Smad2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX390391 SMAD2/3 (R&D Systems, AF3797, lot XHY01)|Embryonic stem cells Oth@ Smad2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX389598 H3K4me3|07-473|thymus His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX389597 thymus Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388450 Anti-H3K27ac antibody (Abcam; ab4729)|shKdm5b ES cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388449 Anti-H3K27ac antibody (Abcam; ab4729)|shLuc ES cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388448 NULL|shKdm5b noLIF day4 ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388447 NULL|shLuc noLIF day4 ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388446 Anti-H3K4me1 antibody (Abcam; ab8895)|shKdm5b noLIF day4 ES cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388445 Anti-H3K4me2 antibody (Abcam; ab32356)|shKdm5b noLIF day4 ES cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388444 Anti-H3K4me3 antibody (Millipore; CS200580)|shKdm5b noLIF day4 ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388443 Anti-H3K4me1 antibody (Abcam; ab8895)|shLuc noLIF day4 ES cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388442 Anti-H3K4me2 antibody (Abcam; ab32356)|shLuc noLIF day4 ES cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388441 Anti-H3K4me3 antibody (Millipore; CS200580)|shLuc noLIF day4 ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388440 NULL|shKdm5b noLIF day3 ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388439 NULL|shLuc noLIF day3 ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388438 Anti-H3K4me1 antibody (Abcam; ab8895)|shKdm5b noLIF day3 ES cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388437 Anti-H3K4me2 antibody (Abcam; ab32356)|shKdm5b noLIF day3 ES cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388436 Anti-H3K4me3 antibody (Millipore; CS200580)|shKdm5b noLIF day3 ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388435 Anti-H3K4me1 antibody (Abcam; ab8895)|shLuc noLIF day3 ES cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388434 Anti-H3K4me2 antibody (Abcam; ab32356)|shLuc noLIF day3 ES cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388433 Anti-H3K4me3 antibody (Millipore; CS200580)|shLuc noLIF day3 ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388432 NULL|shKdm5b noLIF day2 ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388431 NULL|shLuc noLIF day2 ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388430 Anti-H3K4me1 antibody (Abcam; ab8895)|shKdm5b noLIF day2 ES cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388429 Anti-H3K4me2 antibody (Abcam; ab32356)|shKdm5b noLIF day2 ES cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388428 Anti-H3K4me3 antibody (Millipore; CS200580)|shKdm5b noLIF day2 ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388427 Anti-H3K4me1 antibody (Abcam; ab8895)|shLuc noLIF day2 ES cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388426 Anti-H3K4me2 antibody (Abcam; ab32356)|shLuc noLIF day2 ES cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388425 Anti-H3K4me3 antibody (Millipore; CS200580)|shLuc noLIF day2 ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388402 NULL|shKdm5b ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX388392 Anti-KDM5B antibody (Abcam; ab50958)|ES cells Oth@ Kdm5b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX387017 none|facial mesenchyme InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX387016 anti-H3K4me1 antibody (Abcam, catalog# ab8895, lot# GR61294-1)|facial mesenchyme His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX387015 anti-H3K27ac antibody (Abcam, catalog# ab4729, lot# GR7675-1)|facial mesenchyme His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386495 H3K27me3|lincRNA-p21+/+ murine MEF H3K27me3 ChIP-seq with Doxorubicin His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386494 H3K27me3|lincRNA-p21+/+ murine MEF H3K27me3 ChIP-seq without Doxorubicin. His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386493 H3K27me3|lincRNA-p21-/- murine MEF H3K27me3 ChIP-seq with Doxorubicin His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386492 H3K27me3|lincRNA-p21-/- murine MEF H3K27me3 ChIP-seq without Doxorubicin. His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386491 H3K4me3|lincRNA-p21+/+ murine MEF H3K4me3 ChIP-seq with Doxorubicin His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386490 H3K4me3|lincRNA-p21+/+ murine MEF H3K4me3 ChIP-seq without Doxorubicin. His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386489 H3K4me3|lincRNA-p21-/- murine MEF H3K4me3 ChIP-seq with Doxorubicin His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386488 H3K4me3|lincRNA-p21-/- murine MEF H3K4me3 ChIP-seq without Doxorubicin. His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386487 none (input)|lincRNA-p21+/+ murine MEF WCE input with Doxorubicin InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386486 none (input)|lincRNA-p21+/+ murine MEF WCE input without Doxorubicin. InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386485 none (input)|lincRNA-p21-/- murine MEF WCE input with Doxorubicin InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386484 none (input)|lincRNA-p21-/- murine MEF WCE input without Doxorubicin. InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386267 FLAG-M2 monoclonal (Sigma, F3165)|E11.5 limb bud, mock ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX386266 FLAG-M2 monoclonal (Sigma, F3165)|E11.5 limb bud, FLAG-Gli3 ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX385954 Millipore, AP132|mouse embryoid bodies InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX385947 Millipore, AP132|mouse embryonic stem cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX385392 AR (Sahu et al. 2011)|Pro-AR_SPARKI1 Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX385391 AR (Sahu et al. 2011)|Pro-AR_wt1 Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX385390 rIgG (sc-2027, SantaCruz)|Pro-rIgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX385369 Antibody RNA Pol II|Embryonic Stem Cells (ESCs) Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX382123 none|adult mouse epidermis InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX382121 none|whole embryonic mouse skin InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX381477 none|Embryonic stem cells, untreated control, sonicated control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378988 Ser2 (Abcam anti-RNA polymerase II CTD (phospho Serine-2) catalog #ab5095)|wildtype-Chd1 MEFs Ser2 ChIP_seq Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378987 N20 (Santa Cruz catalog #sc-899)|wildtype-Chd1 MEFs N20 ChIP_seq Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378985 FLAG (Sigma anti-FLAG M2 agarose beads catalog #A2220)|wildtype-Chd1 MEFs FLAG ChIP_seq Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378982 Ser2 (Abcam anti-RNA polymerase II CTD (phospho Serine-2) catalog #ab5095)|K510R-Chd1 MEFs Ser2 ChIP_seq Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378981 N20 (Santa Cruz catalog #sc-899)|K510R-Chd1 MEFs N20 ChIP_seq Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378979 FLAG (Sigma anti-FLAG M2 agarose beads catalog #A2220)|K510R-Chd1 MEFs FLAG ChIP_seq Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378973 anti-Sp1 antibody (Santa Cruz sc-17824X)|Sp1 from cKitPlus progenitors Oth@ Sp1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378972 anti-Sp1 antibody (Santa Cruz sc-17824X)|Sp1 from E14 Flk1Plus Oth@ Sp1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378838 none|distal forelimb InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378837 Med12 (Bethyl, A300-774A, lotA300-774A-)1|distal forelimb Oth@ Med12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX378836 PolII (Abcam, ab5131, lot GR37362-1)|distal forelimb Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX377484 anti-Cebpa (Santa Cruz, catalog: sc-61, lot: k1009)|primary Bcell after 18h treatment of estradiol Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX377483 anti-Cebpa (Santa Cruz, catalog: sc-61, lot: k1009)|primary Bcells untreated Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376981 none|male_WT_LF.input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376980 none|male_WT_HF.input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376930 NFATc1 (Abcam, ab2796)|Mouse back skins Oth@ Nfatc1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376591 H3K27ac|11 dpc embryonic forebrain_H3K27ac ChIP-seq His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376590 H3K4me1|11 dpc embryonic forebrain_H3K4me1 ChIP-seq His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376586 anti-H3K27ac (Abcam, ab4729, GR104852-1)|MLL-AF9/NrasG12D murine cell line His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376585 anti-H3K4me3 (Abcam, ab8580)|MLL-AF9/NrasG12D murine cell line His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376584 anti-Brg1 (Abcam, ab4081)|MLL-AF9/NrasG12D murine cell line Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX376583 anti-Brd4 (Bethyl, A301-985A, A301-985A-1)|MLL-AF9/NrasG12D murine cell line Oth@ Brd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373263 H3K27ac (ab4729, Abcam)|H3K27ac_Epi His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373262 H3K4me1 (ab8895, Abcam)|H3K4me1_Epi His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373261 H3K27ac (ab4729, Abcam)|H3K27ac_Kid His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373260 H3K4me1 (ab8895, Abcam)|H3K4me1_Kid His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373259 H3K27ac (ab4729, Abcam)|H3K27ac_Pro His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373258 H3K4me1 (ab8895, Abcam)|H3K4me1_Pro His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373142 rabbit IgG (pre-immune rabbit serum)|mouse splenic CD8 T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373141 custom made antiserum for Tcf1|mouse splenic CD8 T cells Oth@ Tcf7 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX373035 none|Mouse Liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX368297 MCRS1 (Proteintech, 11362-1-AP)|Embryonic stem cells Oth@ Mcrs1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX368296 MCRS1 ( Proteintech, 11362-1-AP)|Embryonic stem cells Oth@ Mcrs1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366586 STAT1(sc-592, SantaCruz)|primary CD4+ T cells from spleen and lymph nodes Oth@ Stat1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366572 H3K36me3|NIH/3T3 Tet-On 3G cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366571 H2AZ|NIH/3T3 Tet-On 3G cells His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366570 H3K27me3|NIH/3T3 Tet-On 3G cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366569 H3K27ac|NIH/3T3 Tet-On 3G cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366568 H3K9me2|NIH/3T3 Tet-On 3G cells His@ H3K9me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366567 H3K9ac|NIH/3T3 Tet-On 3G cells His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366566 H3K4me3|NIH/3T3 Tet-On 3G cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366565 H3K4me1|NIH/3T3 Tet-On 3G cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366411 Ronin|Lab Generated (Zwaka) ANTI-RONIN G4275|Embryonic stem cells Oth@ Thap11 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366410 MBD3|Embryonic stem cells Oth@ Mbd3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX366409 CBP|Embryonic stem cells Oth@ Crebbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365695 Intestinal villus cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365694 Intestinal crypt cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365693 Lgr5+ intestinal stem cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365692 FLAG (Sigma F3165)|Intestinal crypt secretory progenitors Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365689 H3K27ac (Abcam ab4729)|Intestinal crypt enterocyte progenitors His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365688 H3K27ac (Abcam ab4729)|Intestinal crypt secretory progenitors His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365687 H3K4me2 (Millipore 07-030)|Intestinal villus enterocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365686 H3K4me2 (Millipore 07-030)|Intestinal villus goblet cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX365681 H3K4me2 (Millipore 07-030)|Lgr5+ intestinal stem cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX360386 (rb) -MLL4 (#403; Ali Shilatifard)|ES cell culture Oth@ Kmt2d 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX357521 Nave CD4 T cells from spleen cultured for 5 days in Th2 polarizing conditions Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX357520 Nave CD4 T cells from spleen cultured for 5 days in Th1 polarizing conditions Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX357519 anti-Ezh2 polyclonal|Nave CD4 T cells from spleen cultured for 5 days in Th2 polarizing conditions Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX357518 anti-Ezh2 polyclonal|Nave CD4 T cells from spleen cultured for 5 days in Th1 polarizing conditions Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX357517 Rabbit IgG polyclonal|Nave CD4 T cells from spleen cultured for 5 days in Th2 polarizing conditions InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX357516 Rabbit IgG polyclonal|Nave CD4 T cells from spleen cultured for 5 days in Th1 polarizing conditions InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX353401 STAT5B (R&D Systems, Sta5B)|Th9 cells, 16h, STAT5B ChIP Oth@ Stat5b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX353400 STAT5B (R&D Systems, Sta5B)|Th9 cells, 0h, STAT5B ChIP Oth@ Stat5b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352266 Blrp-Ctrl RAW264.7 cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352245 Nrf1 (ab55744, Abcam)|Nrf1_ChIPseq 3T3-L1_LSD1 cells day 7 Oth@ Nrf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352244 None|Input_Nrf1 3T3-L1_LSD1 cells day 7 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352243 Nrf1 (ab55744, Abcam)|Nrf1_ChIPseq 3T3-L1 cells day 0 Oth@ Nrf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352242 None|Input_Nrf1 3T3-L1 cells day 0 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352241 LSD1 (20752, homemade, Schle lab)|LSD1_ChIPseq 3T3-L1_LSD1 cells day 7 Oth@ Kdm1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352240 None|Input_LSD1 3T3-L1_LSD1 cells day 7 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352239 LSD1 (20752, homemade, Schle lab)|LSD1_ChIPseq 3T3-L1_LSD1 cells day 0 Oth@ Kdm1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352238 None|Input_LSD1 3T3-L1_LSD1 cells day 0 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352237 LSD1 (20752, homemade, Schle lab)|LSD1_ChIPseq 3T3-L1 cells day 7 Oth@ Kdm1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352236 None|Input_LSD1 3T3-L1 cells day 7 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352235 LSD1 (20752, homemade, Schle lab)|LSD1_ChIPseq 3T3-L1 cells day 0 Oth@ Kdm1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352234 None|Input_LSD1 3T3-L1 cells day 0 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352044 mouse primary epidermal keratinocytes Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX352043 anti-Brg1 (H-88)|mouse primary epidermal keratinocytes Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX351980 none|Germinal Center InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX351979 H3K27me3 (C36B11; Cell Signaling)|Germinal Center His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX351978 H3K4me3 (MC315, Millipore)|Germinal Center His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX349391 Pol II ChIP in testis Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX349390 TAF7L ChIP in testis Oth@ Taf7l 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX349389 IgG IP testis samples as control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX349377 none|Innate type-2 lymphocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX349376 anti-Gfi1 (a custom rabbit polyclonal antibody raised against N- and C-terminal peptides)|Innate type-2 lymphocytes Oth@ Gfi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX348400 TT2 G9a-/-andGLP-/- Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX348395 anti-G9a : Cell Signalling Technologies ref : 3306S|TT2 KO for G9a and GLP rescued with G9a-wt Oth@ Ehmt2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX348394 anti-G9a : Cell Signalling Technologies ref : 3306S|TT2 Oth@ Ehmt2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX346174 None|Whole heart InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX346170 anti-pol II CTD (abcam ab5095)|whole heart Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX344978 none|Input_ING1_flag_myoblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX344359 C/EBPalpha|CEBPa from macrophages cells Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341783 none|MyoD-induced mouse brown preadipocytes, MLL4 KO, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341781 none|MyoD-induced mouse brown preadipocytes, WT, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341777 H3K27ac|MyoD-induced mouse brown preadipocytes, WT, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341775 H3K4me3|MyoD-induced mouse brown preadipocytes, MLL4 KO, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341773 H3K4me3|MyoD-induced mouse brown preadipocytes, WT, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341771 H3K4me1|MyoD-induced mouse brown preadipocytes, MLL4 KO, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341769 H3K4me1|MyoD-induced mouse brown preadipocytes, WT, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341767 MLL4|MyoD-induced mouse brown preadipocytes, MLL4 KO, MLL4 ChIP Oth@ Kmt2d 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341765 MLL4|MyoD-induced mouse brown preadipocytes, WT, MLL4 ChIP Oth@ Kmt2d 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341763 MyoD|MyoD-induced mouse brown preadipocytes, MLL4 KO, MyoD ChIP Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341762 MyoD|mouse brown preadipocytes, MLL4 KO, MyoD ChIP Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341761 MyoD|MyoD-induced mouse brown preadipocytes, WT, MyoD ChIP Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341760 MyoD|mouse brown preadipocytes, WT, MyoD ChIP Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341425 none|mouse brown preadipocytes, MLL4 KO, C/EBPbeta Cre, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341424 none|mouse brown preadipocytes, WT, C/EBPbeta GFP, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341423 H3K27ac|mouse brown preadipocytes, MLL4 KO, C/EBPbeta Cre, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341422 H3K27ac|mouse brown preadipocytes, WT, C/EBPbeta GFP, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341421 H3K4me1|mouse brown preadipocytes, MLL4 KO, C/EBPbeta Cre, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341420 H3K4me1|mouse brown preadipocytes, WT, C/EBPbeta GFP, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341419 MLL4|mouse brown preadipocytes, MLL4 KO, C/EBPbeta Cre, MLL4 ChIP Oth@ Kmt2d 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341418 MLL4|mouse brown preadipocytes, WT, C/EBPbeta GFP, MLL4 ChIP Oth@ Kmt2d 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341417 C/EBPbeta|mouse brown preadipocytes, MLL4 KO, C/EBPbeta Cre, C/EBPbeta ChIP Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341416 C/EBPbeta|mouse brown preadipocytes, MLL4 KO, Vec Cre, C/EBPbeta ChIP Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341415 C/EBPbeta|mouse brown preadipocytes, WT, C/EBPbeta GFP, C/EBPbeta ChIP Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341414 C/EBPbeta|mouse brown preadipocytes, WT, Vec GFP, C/EBPbeta ChIP Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341038 anti-POL-II-S5P|Transformed mouse embryonic fibroblast line, POL-II-S5P ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341037 anti-POL-II-S2P|Transformed mouse embryonic fibroblast line, POL-II-S2P ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX341034 IgG rabbit serum|Transformed mouse embryonic fibroblast line, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX340961 IgG|FDCPmix InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX337965 Twist1 (Sigma, T6451, 5 g)|Peripheral nerve sheath tumor cell line Oth@ Twist1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX337964 Twist1 (Sigma, T6451, 5 g)|E10.5 forelimb buds Oth@ Twist1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX337963 Twist1 (Sigma, T6451, 5 g)|E12.5 atrioventricular canal endocardial cushion Oth@ Twist1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX337569 input|p190 Bcr-Abl immortalized progenitor B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX337568 SOX4|p190 Bcr-Abl immortalized progenitor B cells Oth@ Sox4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX337439 RAR antibody|Liver Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX337186 none|Undifferentiated mouse ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335749 Input DNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335748 anti-IRF4|IRF4 ChIPSeq Oth@ Irf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335674 H3K9me3 (Abcam, cat# ab8898) His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335673 H3K4me3 (Millipore, cat# 17-614, part# CS200580) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335668 H3K9Ac (Active Motif, cat# 39137) His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335667 H3K27Ac (Active Motif, cat# 39133) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335666 Polymerase II (Covance, cat# MMS-126R) Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335665 H3K36me3 (Abcam, cat# ab9050) His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335561 none|E15.5 WT kidney InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335560 anti-p53 antibody (Santa Cruz Biotech; catalog# sc-6243; lot# C1609)|E15.5 WT kidney Oth@ Trp53 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX335057 anti-Flag (M2)|Embryonic stem cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX334976 None|mouse ESCs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333584 none|MBD3-/- ES InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333583 Mi2B (ab70469, Abcam)|MBD3-/- ES Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333582 H3K27me3 (07-449, Millipore)|MBD3-/- ES His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333581 H3K4me3 (ab8580, Abcam)|MBD3-/- ES His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333580 none|MBD3flox/- iPSC InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333579 Mi2B (ab70469, Abcam)|MBD3flox/- iPSC Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333578 H3K27me3 (07-449, Millipore)|MBD3flox/- iPSC His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333577 H3K4me3 (ab8580, Abcam)|MBD3flox/- iPSC His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333576 none|MBD3flox/- 8 days after dox induction InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333575 Mi2B (ab70469, Abcam)|MBD3flox/- 8 days after dox induction Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333573 H3K4me3 (ab8580, Abcam)|MBD3flox/- 8 days after dox induction His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333572 none|MBD3flox/- 4 days after dox induction InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333571 Mi2B (ab70469, Abcam)|MBD3flox/- 4 days after dox induction Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333570 H3K27me3 (07-449, Millipore)|MBD3flox/- 4 days after dox induction His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333569 H3K4me3 (ab8580, Abcam)|MBD3flox/- 4 days after dox induction His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333568 none|MBD3flox/- MEF InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333566 H3K27me3 (07-449, Millipore)|MBD3flox/- MEF His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333565 H3K4me3 (ab8580, Abcam)|MBD3flox/- MEF His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333564 none|WT iPSC InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333563 Mi2B (ab70469, Abcam)|WT iPSC Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333562 Mbd3 (ab16057, Abcam & Bethyl laboratories A302-528\9A)|WT iPSC Oth@ Mbd3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333561 H3K27me3 (07-449, Millipore)|WT iPSC His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333560 H3K4me3 (ab8580, Abcam)|WT iPSC His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333559 none|WT 8 days after dox induction InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333558 Mi2B (ab70469, Abcam)|WT 8 days after dox induction Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333555 H3K4me3 (ab8580, Abcam)|WT 8 days after dox induction His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333554 none|WT 4 days after dox induction InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333553 Mi2B (ab70469, Abcam)|WT 4 days after dox induction Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333552 Mbd3 (ab16057, Abcam & Bethyl laboratories A302-528\9A)|WT 4 days after dox induction Oth@ Mbd3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333551 H3K27me3 (07-449, Millipore)|WT 4 days after dox induction His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333550 H3K4me3 (ab8580, Abcam)|WT 4 days after dox induction His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333547 Mbd3 (ab16057, Abcam & Bethyl laboratories A302-528\9A)|WT MEF Oth@ Mbd3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333546 H3K27me3 (07-449, Millipore)|WT MEF His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX333545 H3K4me3 (ab8580, Abcam)|WT MEF His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332739 AcH3 (Millipore, 06-600, Lot: 2068182)|Nave T cells His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332738 AcH3 (Millipore, 06-599, Lot: 2068182)|Nave T cells His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332682 H3K27ac(Active Motif 39134)|midbrain His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332681 H3K4me1 (Abcam ab8895)|midbrain His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332363 Input_ChIPSeq_ST InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332362 Input_ChIPSeq_SC InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332361 Input_ChIPSeq_AGSC InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332360 Anti-Histone H2A.Z antibody|H2AZ_ChIPSeq_ST His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332359 Anti-acetyl-Histone H3 (Lys9) Antibody|H3K9ac_ChIPSeq_ST His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332358 RNA Pol2 antibody|Pol2_ChIPSeq_ST Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332357 5-Hydroxymethylcytosine (5-hmC) antibody|5hMC_M Oth@ 5-hmC 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332356 5-Hydroxymethylcytosine (5-hmC) antibody|5hMC_ST Oth@ 5-hmC 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332355 5-Hydroxymethylcytosine (5-hmC) antibody|5hMC_SC Oth@ 5-hmC 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332353 Histone H3K27ac antibody|H3K27ac_ChIPSeq_ST His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332352 Histone H3K27ac antibody|H3K27ac_ChIPSeq_SC His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332351 Histone H3K27ac antibody|H3K27ac_ChIPSeq_AGSC His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332350 Anti-Histone H3 (mono methyl K4) antibody|H3K4me1_ChIPSeq_ST His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332349 Anti-Histone H3 (mono methyl K4) antibody|H3K4me1_ChIPSeq_SC His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332348 Anti-trimethyl-Histone H3 (Lys27) Antibody|H27me3_ChIPSeq_ST His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332347 Anti-trimethyl-Histone H3 (Lys27) Antibody|H27me3_ChIPSeq_SC His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332346 Anti-trimethyl-Histone H3 (Lys27) Antibody|H27me3_ChIPSeq_AGSC His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332345 Histone H3K4me3 antibody|H3K4me3_ChIPSeq_ST His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332344 Histone H3K4me3 antibody|H3K4me3_ChIPSeq_SC His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX332343 Histone H3K4me3 antibody|H3K4me3_ChIPSeq_AGSC His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX330845 Millipore, 05-745R clone 15-10C-E4|H3K4me3_Ter119_Positive His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX330844 Millipore, 07-436|H3K4me1_Ter119_Positive His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX330713 polII|mouse dendritic cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX330712 H3K4me3|mouse dendritic cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX330672 input|NA|E14 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX330671 H3K27me3|Millipore #07-449|E14::N3-EZH2 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX330164 p300 (SC-585)|craniofacial tissue Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329254 Rabbit IgG (R&D systems.)|T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329195 H3K9ac Millipore 06-942 lot#1973414|H3K9ac ChIPSeq HEBI_cohort2 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329194 H3K9ac Millipore 06-942 lot#1973414|H3K9ac ChIPSeq YF_cohort2 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329193 H3K9ac Millipore 06-942 lot#1973414|H3K9ac ChIPSeq WT_cohort2 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329192 H3K9ac Millipore 06-942 lot#1973414|H3K9ac ChIPSeq Cre_cohort2 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329191 H3K9ac Millipore 06-942 lot#1973414|H3K9ac ChIPSeq KA_cohort1 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329190 H3K9ac Millipore 06-942 lot#1973414|H3K9ac ChIPSeq HAHA_cohort1 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329189 H3K9ac Millipore 06-942 lot#1973414|H3K9ac ChIPSeq WT_cohort1 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX329188 H3K9ac Millipore 06-942 lot#1973414|H3K9ac ChIPSeq Cre_cohort1 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328692 MyoG (M-225, Santa Cruz)|C2C12 Oth@ Myog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328613 anti-POL-II-S5P|Transformed mouse embryonic fibroblast line Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328609 Ezh2|Transformed mouse embryonic fibroblast line Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328608 none|Transformed mouse embryonic fibroblast line InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328606 anti-POL-II-S5P|Differentiating mouse embryonic stem cell line Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328605 anti-H3K36me3|Differentiating mouse embryonic stem cell line His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328604 anti-H3K4me3|Differentiating mouse embryonic stem cell line His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328603 H3K27me3|Differentiating mouse embryonic stem cell line His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328602 Ezh2|Differentiating mouse embryonic stem cell line Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328601 none|Differentiating mouse embryonic stem cell line InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328600 anti-POL-II-S5P|Undifferentiated mouse embryonic stem cell line Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328599 anti-H3K36me3|Undifferentiated mouse embryonic stem cell line His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328598 anti-H3K4me3|Undifferentiated mouse embryonic stem cell line His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328597 H3K27me3|Undifferentiated mouse embryonic stem cell line His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX328596 Ezh2|Undifferentiated mouse embryonic stem cell line Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX327702 Dynabeads MyOne Streptavidin T1 (Invitrogen, #65601)|E14-BioDnmt3L embryonic stem cells, shSuz12, Dnmt3L ChIP Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX327701 Dynabeads MyOne Streptavidin T1 (Invitrogen, #65601)|E14-BioDnmt3L embryonic stem cells, shGFP, Dnmt3L ChIP Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX327700 Ezh2 (D2C9) (Cell Signaling, #5246)|E14 embryonic stem cells, shDnmt3L, Ezh2 ChIP Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX327699 Ezh2 (D2C9) (Cell Signaling, #5246)|E14 embryonic stem cells, shGFP, Ezh2 ChIP Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX327298 J1_Ino80_input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX327297 J1_Ino80 Oth@ Ino80 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX327245 none|Liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX327244 GATA4 C-20 (Santa Cruz sc-1237)|Liver Oth@ Gata4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326478 Bethyl Laboratories (#A302-175A)|ES cell culture Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326476 Active Motif (#39155)|ES cell culture His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326429 mouse anti-Pol2 (Millipore, 17-672)|Forelimb Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326427 rabbit anti-H3K27me3 (Millipore, 07-449)|Forelimb His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326426 rabbit anti-H3K4me3 (Abcam, ab1342)|Forelimb His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326212 Rad21|astrocyte Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326211 none|astrocyte InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326210 Rad21|neural stem cell Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX326209 none|neural stem cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323784 H3K4me3 (Millipore, cat 17-614)|R6/2, striatum, 12 weeks His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323783 H3K4me3 (Millipore, cat 17-614)|R6/2 wildtype littermate, striatum, 12 weeks His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323782 H3K4me3 (Millipore, cat 17-614, lot JBC1793805)|R6/2, striatum, 8 weeks His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323781 H3K4me3 (Millipore, cat 17-614, lot JBC1793805)|R6/2 wildtype littermate, striatum, 8 weeks His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323780 H3K4me3 (Millipore, cat 17-614)|R6/2, cortex, 12 weeks His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323585 TLE Antibody (C-19)|Mouse back skins Oth@ Tle1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323584 TCF-4 Antibody (N-20)|Mouse back skins Oth@ Tcf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323583 TCF3|Mouse back skins Oth@ Tcf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323578 Histone mark H3 (ab1791-100)|embryonic fibroblasts His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323577 Histone mark H3K27acetyl (ab4729)|embryonic fibroblasts His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323576 Myt1l (ab15828)|embryonic fibroblasts treated with BAM factors Oth@ Myt1l 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323574 none (input)|neural progenitor InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323573 Santa Cruz Biotechnology SC-6029|neural progenitor Oth@ Pou3f2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323571 Brn2 (ab15828)|embryonic fibroblasts treated with BAM factors Oth@ Pou3f2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323569 Brn2 (ab15828)|embryonic fibroblasts Oth@ Pou3f2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323564 Ascl1 (ab74065)|neural progenitor treated with Ascl1 Oth@ Ascl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323563 none (input)|neural progenitor treated with Ascl1 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323557 Ascl1 (ab74065)|embryonic fibroblasts Oth@ Ascl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX323414 Cebpa: Santa Cruz 14-AA|LSK_CebpaWT Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX321777 input control|Rag1 -/- DN thymocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX321776 H3K4me3 from Active Motif (Carlsbad, CA)|Rag1 -/- DN thymocytes His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX321775 H3ac from EMD Millipore (Billerica, MA)|Rag1 -/- DN thymocytes His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX320068 Rad21 (Abcam, ab992, Multiple Lots)|CD4+ CD8+ Double Positive Thymocytes Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX320067 NIPBL (Bethyl Laboratories, A301-779A, lot A301-779A-2)|CD4+ CD8+ Double Positive Thymocytes Oth@ Nipbl 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX320066 Med1 (Bethyl Laboratories, A300-793A, lot A300-793A-1)|CD4+ CD8+ Double Positive Thymocytes Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319855 H3K27me3 (Millipore 07-449)|Primary thioglycollate-elicited peritoneal macrophages His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319764 STAT5A (Santa Cruz, sc-1081)|Mammary gland tissues, p6, STAT5A ChIP Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319763 none|Mammary gland tissues, p6, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319762 H3K4me3 (Millipore, Temecula, 17-614)|Mammary gland tissues, p6, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319558 control_BirA ChIP DNA from ES cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319557 bioNanog ChIP DNA from ES cells Oth@ Nanog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319554 bioMax ChIP DNA from ES cells Oth@ Max 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319553 bioTip60 ChIP DNA from ES cells Oth@ Kat5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319552 bioE2F4 ChIP DNA from ES cells Oth@ E2f4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX319551 bioDmap1 ChIP DNA from ES cells Oth@ Dmap1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318857 none|neuronal progenitor cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318856 H190 (Santa Cruz, sc764)|neuronal progenitor cells, H190 ChIP Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318116 RPB2|sc-67318|RPB2_ZT22, liver cells Pol@ Polr2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318115 RPB2|sc-67318|RPB2_ZT18, liver cells Pol@ Polr2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318114 RPB2|sc-67318|RPB2_ZT14, liver cells Pol@ Polr2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318113 RPB2|sc-67318|RPB2_ZT10, liver cells Pol@ Polr2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318112 RPB2|sc-67318|RPB2_ZT06, liver cells Pol@ Polr2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318111 RPB2|sc-67318|RPB2_ZT02, liver cells Pol@ Polr2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318104 non-immuned rabbit serum|MSC clone - control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318103 H4K20ME1 (Abcam, ab9051, lot 602259)|MSC clone - H4K20ME1 antibody His@ H4K20me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318102 non-immuned rabbit serum|MSC population - control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX318101 H4K20ME1 (Abcam, ab9051, lot 602259)|MSC population - H4K20ME1 antibody His@ H4K20me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317690 H3K27ac (Active, Motif, lot AM)|ES cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317665 H3K36Me3 (Abcam, ab9050-100, lot 707946)|ES cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317662 H3K9Me3 (Abcam, ab8898, lot GR88132-1)|ES cells His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317661 H3K4Me3 (Active, Motif, lot 39159)|ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317660 H3K4Me (Abcam, ab8895-50, lot 720417)|ES cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317638 H4K91Ac|mouse, in vitro activated B cells His@ H4K91ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317635 H2BK120Ac|mouse, in vitro activated B cells His@ H2BK120ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317632 H3K9Ac|mouse plasmacytoma PCT6937 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317631 PolII|mouse plasmacytoma PCT4961 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317620 H2BK5Ac|mouse, in vitro activated B cells His@ H2BK5ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317038 anti-RING1B antibody|PMID: 11289226|forelimb Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317037 anti-RING1B antibody|PMID: 11289226|midbrain Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317036 anti-RING1B antibody|PMID: 11289226|forebrain Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317019 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008018|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317018 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008017|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317017 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008016|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317016 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008015|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317015 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008014|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317014 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008013|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317013 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008012|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317012 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008011|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317011 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008010|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317010 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008009|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317009 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008008|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317008 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008007|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317007 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008006|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317006 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008005|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317005 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008004|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317004 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008003|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317003 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008002|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX317002 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|Liver His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316914 none|Input DNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316702 SREBP1|sc-8984x|SREBP1_ZT22, liver cells Oth@ Srebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316701 SREBP1|sc-8984x|SREBP1_ZT18, liver cells Oth@ Srebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316700 SREBP1|sc-8984x|SREBP1_ZT14, liver cells Oth@ Srebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316699 SREBP1|sc-8984x|SREBP1_ZT10, liver cells Oth@ Srebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316698 SREBP1|sc-8984x|SREBP1_ZT06, liver cells Oth@ Srebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316697 SREBP1|sc-8984x|SREBP1_ZT02, liver cells Oth@ Srebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316676 anti-PU.1 (Santa Cruz; sc-352)|purified primary B cells from Bi-8i mice; stimulated for 3 Days; anti-PU.1 ChIP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316285 none|mouse CD8+ T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316159 PU.1 T-21 (Santa Cruz, sc-352x)|3T3-L1 adipocyte, day 10, adeno-PU1 72hrs, PU.1 ChIP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316158 PPARg H-100 (Santa Cruz, sc-7196x)|3T3-L1 adipocyte, day 10, adeno-PU1 72hrs, PPARg ChIP Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316157 PPARg H-100 (Santa Cruz, sc-7196x)|3T3-L1 adipocyte, day 10, adeno-LACZ 72hrs, PPARg ChIP Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316156 none|3T3-L1 adipocyte, day 10, adeno-PU1 72hrs, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX316155 none|3T3-L1 adipocyte, day 10, adeno-LACZ 72hrs, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX315278 H3K4me3: Active Motif 39159, lot# 0169004|Neural progenitor cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX315277 H3K4me1: Abcam ab8895, lot# 961813|Neural progenitor cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX315276 H3K27me3: Millipore 07-449 lot# DAM1588246|Neural progenitor cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX315274 Ascl1: Abcam ab74065, lot# 830280|Neural progenitor cells Oth@ Ascl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX315202 N/A|Embryonic stem cell culture InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX314733 none|Embryonic Stem Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX314630 POL2|day of pseudopregnancy 2.5 and 3.5 female mouse uterus Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX314629 POL2|postnatal day 12 female mouse uterus Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX314628 FOXA2|day of pseudopregnancy 2.5 and 3.5 female mouse uterus Oth@ Foxa2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX314627 FOXA2|postnatal day 12 female mouse uterus Oth@ Foxa2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX312230 anti-IgG|ESC E14 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX312229 anti-Max|ESC E14 Oth@ Max 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310209 ChIPseq_cFos_mast Oth@ Fos 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310208 ChIPseq_Mitf_mast Oth@ Mitf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310207 ChIPseq_Scl_mast Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310206 ChIPseq_Runx1_mast Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310205 ChIPseq_PU1_mast Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310204 ChIPseq_Meis1_mast Oth@ Meis1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310203 ChIPseq_Lmo2_mast Oth@ Lmo2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310202 ChIPseq_Gata2_mast Oth@ Gata2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310201 ChIPseq_Fli1_mast Oth@ Fli1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310200 ChIPseq_Erg_mast Oth@ Erg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX310199 ChIPseq_E2A_mast Oth@ Tcf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX309670 Ser5ph RNA Pol II|CD43 negative mouse resting B cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX309669 8WG16|CD43 negative mouse resting B cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX306600 none|DPdouble positive thymocytes derived from in vitro expanded bone marrow cells transduced with Nup98-HoxB4, grown with IL7 and DLL4 (Notch signaling) and injected into Rag2-/- mouse InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX306596 anti H3K4me3 antibody (Abcam ab8580)|DPdouble positive thymocytes derived from in vitro expanded bone marrow cells transduced with Nup98-HoxB4, grown with IL7 and DLL4 (Notch signaling) and injected into Rag2-/- mouse His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX306595 none|ProT in vitro expanded bone marrow cells transduced with Nup98-HoxB4 and grown with IL7 and DLL4 (Notch signaling) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX306594 anti H3K27me3 antibody (Cell Signaling #9733)|ProT in vitro expanded bone marrow cells transduced with Nup98-HoxB4 and grown with IL7 and DLL4 (Notch signaling) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX306590 none|HSC in vitro expanded bone marrow cells transduced with Nup98-HoxB4 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX305929 RNA Polymerase II (phospho S5) (Abcam ab5131)|ESC stage cultures, RNA Polymerase II Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX305922 H3K4me3 (Millipore 07-473)|ESC stage cultures, H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX301457 None|Hepa 1-6 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298238 Rad21|Rag1 -/- pro-B cells Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298236 CTCF|Rag1 -/- pro-B cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298234 H3K4me3|Rag1 -/- pro-B cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298233 H3K4me2|Rag1 -/- pro-B cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298231 PolII|Rag1 -/- pro-B cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298229 H3K27me3|Rag1 -/- pro-B cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298228 H3ac|Rag1 -/- pro-B cells His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298196 MNase digested input|MNase digested input DNA_differentiated ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298195 MNase digested input|MNase digested input DNA_embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298194 H4K16ac antibody (Millipore, catalog# 07-329, lot# 2073125)|H4K16ac ChIP_differentiated ES cells His@ H4K16ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298193 H4K16ac antibody (Millipore, catalog# 07-329, lot# 2073125)|H4K16ac ChIP_embryonic stem cells His@ H4K16ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298037 NFE2|SC-477 from Santa Crus|Ter119+ Cells Oth@ Nfe2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298036 GATA1|ab11852 from Abcam|Ter119+ Cells Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX298035 CTCF|07-729 from Millipore|Ter119+ Cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX288143 H3K27me3 (Millipore, 07-449)|Primary CD4+ Th cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX288139 Jarid2 (Abcam, ab48137)|Primary CD4+ Th cells Oth@ Jarid2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX287266 H3K27me3 Millipore:07-449|H3K27me3 ChIP-seq in wt ESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX287265 H3K27me3 Millipore:07-449|H3K27me3 ChIP-seq in Eed-/- ESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX287264 H3K27me3 Millipore:07-449|H3K27me3 ChIP-seq in Suz12GT (aka Suz12(Bgal/Bgal)) ESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX287026 none|E17.5 Pancreas InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX287025 none|E12.5 Neural Tube InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX287024 Lab generated rabbit anti-Ptf1a (AN255/256)|E12.5 Telencephalon Oth@ Ptf1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286412 HNF4a (ab41898, Abcam)|Hnf4a_Intact Oth@ Hnf4a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286411 FOXA1 (ab23738, Abcam)|FoxA1_Intact Oth@ Foxa1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286410 AP2a (ab52222, Abcam)|AP2a_Intact_rep2 Oth@ Tfap2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286409 AP2a (ab52222, Abcam)|AP2a_Intact_rep1 Oth@ Tfap2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286408 AP2a (ab52222, Abcam)|AP2a_Cast1b Oth@ Tfap2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286407 AP2a (ab52222, Abcam)|AP2a_Cast1a Oth@ Tfap2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286406 AR (Sahu et al. 2011)|AR_Intact_rep2 Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286405 AR (Sahu et al. 2011)|AR_Intact_rep1 Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286400 FOXA1 (ab23738, Abcam)|FoxA1_Cast+T Oth@ Foxa1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286398 HNF4a (ab41898, Abcam)|Hnf4a_Cast1b Oth@ Hnf4a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286397 HNF4a (ab41898, Abcam)|Hnf4a_Cast1a Oth@ Hnf4a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286396 AR (Sahu et al. 2011)|AR_Cast+T_rep2 Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286395 AR (Sahu et al. 2011)|AR_Cast+T_rep1 Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286392 rIgG (sc-2027, SantaCruz)|rIgG1b InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286391 rIgG (sc-2027, SantaCruz)|rIgG1a InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286388 FOXA1 (ab23738, Abcam)|FoxA1_Cast+T_rep2 Oth@ Foxa1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286387 FOXA1 (ab23738, Abcam)|FoxA1_Cast+T_rep1 Oth@ Foxa1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286386 FOXA1 (ab23738, Abcam)|FoxA1_Cast Oth@ Foxa1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286385 AR (Sahu et al. 2011)|AR_Cast+T_rep2b Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286384 AR (Sahu et al. 2011)|AR_Cast+T_rep2a Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286383 AR (Sahu et al. 2011)|AR_Cast+T_rep1b Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286382 AR (Sahu et al. 2011)|AR_Cast+T_rep1a Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286381 AR (Sahu et al. 2011)|AR_Cast1b Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX286380 AR (Sahu et al. 2011)|AR_Cast1a Oth@ Ar 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285628 Pro-B cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285625 Dynabeads M-280 Streptavidin (Invitrogen)|Pro-B cell Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285138 none, input|CLK_Input_Sonicated_WT30_ZT22 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285137 none, input|CLK_Input_Sonicated_WT30_ZT06 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285136 none, input|CLK_Input_Sonicated_WT29_ZT22 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285135 none, input|CLK_Input_Sonicated_WT29_ZT06 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285134 none, input|CLK_Input_Sonicated_WT28_ZT22 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285133 none, input|CLK_Input_Sonicated_WT28_ZT06 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285132 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_Sonicated_WT30_ZT22 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285131 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_Sonicated_WT30_ZT06 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285130 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_Sonicated_WT29_ZT22 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285129 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_Sonicated_WT29_ZT06 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285128 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_Sonicated_WT28_ZT22 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285127 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_Sonicated_WT28_ZT06 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285126 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_MNase_WT30_ZT22 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285125 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_MNase_WT30_ZT06 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285124 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_MNase_WT29_ZT22 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285123 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_MNase_WT29_ZT06 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285122 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_MNase_WT28_ZT22 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285121 goat polyclonal anti-CLK, S-19; sc-6927; lot E3112|CLK_ChIP_MNase_WT28_ZT06 Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285117 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_BM5_ZT22 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285116 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_BM5_ZT18 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285115 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_BM5_ZT14 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285114 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_BM5_ZT10 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285113 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_BM5_ZT06 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285112 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_BM5_ZT02 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285111 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT12_ZT22 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285110 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT12_ZT18 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285109 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT12_ZT14 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285108 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT12_ZT10 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285107 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT12_ZT06 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285106 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT12_ZT02 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285105 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT11_ZT22 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285104 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT11_ZT18 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285103 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT11_ZT14 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285102 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT11_ZT10 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285101 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT11_ZT06 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX285100 rabbit polyclonal anti-H2AZ antibody from Active Motif, #39113 , lot 01008001|H2AZ_WT11_ZT02 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX283870 NULL|shKdm5b 4TF-MEFs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX283869 NULL|shLuc 4TF-MEFs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX283868 Anti-H3K4me2 antibody (Abcam: ab32356)|shKdm5b 4TF-MEFs His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX283867 Anti-H3K4me3 antibody (Millipore: 17-614)|shKdm5b 4TF-MEFs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX283866 Anti-H3K4me2 antibody (Abcam: ab32356)|shLuc 4TF-MEFs His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX283865 Anti-H3K4me3 antibody (Millipore: 17-614)|shLuc 4TF-MEFs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX282674 Scl/Tal1|Mouse erythroleukemic cells Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX282673 N/A (input sample)|Hematopoietic progenitors InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX282672 H3K4me1|Hematopoietic progenitors His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX282667 normal goat IgG|ES cell derived day4 EB (embryoid body) Flk1+ mesodermal cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX278534 IgG: Sigma, I8140|Haematopoietic progenitor cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX278100 none|CD8+ cells, Foxo1tagBirA mice InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX278099 none|CD8+ cells, wild-type InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX278098 Strepdavidin|CD8+ cells, Foxo1tagBirA mice Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX278097 Foxo1 antibody (Abcam, Ab39670)|CD8+ cells, wild-type Oth@ Foxo1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX277330 RNA Pol II antibody (Santa Cruz Biotechnology, N20, sc899)|Murine erythroleukemia (MEL) cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX277329 CDK9 C20 antibody (Santa Cruz Biotechnology, C20, sc-484)|Murine erythroleukemia (MEL) cells Oth@ Cdk9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX276677 None|Differentiated and FACS from NSCs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX276676 H3K27me3|Differentiated and FACS from NSCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX276675 H3K4me3|Differentiated and FACS from NSCs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX276674 None|Derived from mESCs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX276673 H3K27me3|Derived from mESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX276672 H3K4me3|Derived from mESCs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX275816 Mouse embryonic stem cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX275706 rabbit IgG (I5006, Sigma)|IgG_TgERG_leukemia_2 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX275705 ERG-1/2/3 (clone C-17, Sc354X, Santa Cruz)|ERG_TgERG_leukemia_2 Oth@ Erg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX275704 rabbit IgG (I5006, Sigma)|IgG_TgERG_leukemia_1 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX275703 ERG-1/2/3 (clone C-17, Sc354X, Santa Cruz)|ERG_TgERG_leukemia_1 Oth@ Erg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX275463 None|None|mouse heart InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX275457 Brd4|A301-985A|mouse heart Oth@ Brd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX273306 none|spleen, WT, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX273305 H3K4me3 (Active Motif Cat.#39159 Lot.4)|spleen, RBP-J mutant, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX273304 H3K4me3 (Active Motif Cat.#39159 Lot.4)|spleen, WT, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX273303 H3K27me3 (Millipore Cat.#07-449 Lot. JBC1854858)|spleen, RBP-J mutant, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX273302 H3K27me3 (Millipore Cat.#07-449 Lot. JBC1854858)|spleen, WT, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX272969 FKHR (H-128)X (sc-11350X, Santa Cruz Biotechnology), lot# F0310|spleen Oth@ Foxo1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX272067 H3K4me3|Abcam AB8580|Chromatin IP against H3K4 (10^6) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX272066 H3K27me3|Abcam AB6002|Chromatin IP against H3K27me3 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX272026 anti-H3K27me3|E11.5 Primordial Germ Cells, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX272025 anti-H3K4me3|E11.5 Primordial Germ Cells, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX272024 none|E11.5 Primordial Germ Cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX271863 anti-H3K27me3 (Millipore, 17-622, lot 1731568)|BCL1 cell line transduced with Y641N EZH2 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX271862 anti-H3K27me3 (Millipore, 17-622, lot 1731568)|BCL1 cell line transduced with Y641F EZH2 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX271861 anti-H3K27me3 (Millipore, 17-622, lot 1731568)|BCL1 cell line transduced with WT EZH2 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX270568 none|CD4+ T cells_treatment with immobilized anti-CD3 mAb_input DNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX270557 none|mouse embryo fibroblasts_background_p53-/- dox InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX270556 CM-5 (Vector labs, VP-P956)|mouse embryo fibroblasts_p53 ChIP-seq_p53-/- dox Oth@ Trp53 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX270555 none|mouse embryo fibroblasts_background_wt dox InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX270554 CM-5 (Vector labs, VP-P956)|mouse embryo fibroblasts_p53 ChIP-seq_wt dox Oth@ Trp53 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX268271 7438 cells + Afos Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX268232 Streptavidin Dynalbeads (Invitrogen)|Beko-bioNIC cells Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX268231 Streptavidin Dynalbeads (Invitrogen)|Beko-bio cells Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX268023 none (input)|iWAT-derived adipocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX266814 H3K4me3 (Millipore, 07-473)|Embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX266512 none|T29 Ik1-ER cells treated with 4OHT InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX266511 in house anti-Ikaros rabbit polyclonal antibody ; lot: A3|T29 Ik1-ER cells treated with 4OHT Oth@ Ikzf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX265320 DNase|Male C57BL/6, adrenalectomized DNS@ DNase-Seq 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX264236 none (input lysate)|primary CD4+ T cells from spleen and lymph nodes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX264235 anti-Bach2 - rabbit antibody (generated in-house, Tohoku University)|primary CD4+ T cells from spleen and lymph nodes Oth@ Bach2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262835 none|NIH3T3_Control_combined InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262834 none|NIH3T3_Control_UO InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262833 none|NIH3T3_Control_LAT InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262832 none|NIH3T3_Control_15 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262831 none|NIH3T3_Control_03 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262830 Total H3|NIH3T3_TOTAL_H3_UO His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262829 Total H3|NIH3T3_TOTAL_H3_LAT His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262828 Total H3|NIH3T3_TOTAL_H3_15 His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262827 Total H3|NIH3T3_TOTAL_H3_03 His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262810 8WG16|NIH3T3_8WG16_UO Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262805 8WG16|NIH3T3_8WG16_03 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262804 anti-Net 1996|NIH3T3_NET_UO Oth@ Elk3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262803 anti-Net 1996|NIH3T3_NET_LAT Oth@ Elk3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262802 anti-Net 1996|NIH3T3_NET_15 Oth@ Elk3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262801 anti-Net 1996|NIH3T3_NET_03 Oth@ Elk3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262800 SAP-1a|NIH3T3_SAP1_UO Oth@ Elk4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262799 SAP-1a|NIH3T3_SAP1_LAT Oth@ Elk4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262798 SAP-1a|NIH3T3_SAP1_15 Oth@ Elk4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262797 SAP-1a|NIH3T3_SAP1_03 Oth@ Elk4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262796 ELK1|NIH3T3_ELK1_UO Oth@ Elk1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262795 ELK1|NIH3T3_ELK1_LAT Oth@ Elk1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262794 ELK1|NIH3T3_ELK1_15 Oth@ Elk1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262793 ELK1|NIH3T3_ELK1_03 Oth@ Elk1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262792 MRTF-B|NIH3T3_MRTFB_UO Oth@ Mkl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262791 MRTF-B|NIH3T3_MRTFB_LAT Oth@ Mkl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262790 MRTF-B|NIH3T3_MRTFB_15 Oth@ Mkl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262789 MRTF-B|NIH3T3_MRTFB_03 Oth@ Mkl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262788 MRTF-A|NIH3T3_MRTFA_UO Oth@ Mkl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262787 MRTF-A|NIH3T3_MRTFA_LAT Oth@ Mkl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262786 MRTF-A|NIH3T3_MRTFA_15 Oth@ Mkl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262785 MRTF-A|NIH3T3_MRTFA_03 Oth@ Mkl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262784 SRF|NIH3T3_SRF_UO Oth@ Srf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262783 SRF|NIH3T3_SRF_LAT Oth@ Srf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262228 H3K27me3|C2C12 myoblasts His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262227 H3K4me3|C2C12 myoblasts His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262226 Ezh2|C2C12 myoblasts Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262225 IgG|C2C12 myotubes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262224 IgG|C2C12 myoblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX262223 YY1|C2C12 myotubes Oth@ Yy1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX257624 CEBPB|C/EBP Antibody (Santa Cruz Biotech, catalog# sc-150) Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX257623 NR3C1|Mix of GR Antibody (Santa Cruz Biotech, catalog# sc-1004) and Glucocorticoid Receptor Antibody (Thermo Scientific, catalog# PA1-511A) Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX256950 anti V5 (Invitrogen) Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX256949 anti V5 (Invitrogen)|V5-TopoIIa etoposide BrgWT Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX256780 none|NMuMG cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255484 Rabbit normal IgG|IgG_ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255483 ab25388|HEXIM1_ChIP Oth@ Hexim1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255482 mAb #2316|CDK9_ChIP Oth@ Cdk9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255471 SC-899|Pol2_si_hnRNPB1 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255470 SC-899|Pol2_si_hnRNPA1 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255469 SC-899|Pol2_siNC Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255468 SC-899|Pol2_2meth_as7SK Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255467 SC-899|Pol2_2meth_asNC Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255466 SC-899|Pol2_SRSF2ko Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255465 SC-899|Pol2_SRSF2wt Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255464 SC-899|Pol2_SRSF1ko Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255463 SC-899|Pol2_SRSF1wt Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255462 anti-HA (ab9110)|SRSF2_ChIP_SRSF1ko Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255461 anti-HA (ab9110)|SRSF2_ChIP_SRSF1wt Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255460 anti-HA (ab9110)|SRSF1_ChIP_SRSF2ko Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255459 anti-HA (ab9110)|SRSF1_ChIP_SRSF2wt Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255458 (Fu and Maniatis, 1990)|SRSF2_NA_ChIP Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255457 Anti-SRSF1 (32-4500)|SRSF1_NA_ChIP Oth@ Srsf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255456 anti-HA (ab9110)|SRSF2_HA_ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX255455 anti-HA (ab9110)|SRSF1_HA_ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX254869 H3K27Ac|Proximal Forelimbs E12.5 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX254868 H3K27Ac|Early forelimb buds E10.5 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX254867 H3K27Ac|Early forelimb buds E9.5 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX253193 rabbit anti-IgG Abcam,catalog #37415, lot #905012|BMiFLT3 (15-3) cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX253192 rabbit anti-Runx1 generated against a C-terminal peptide (kindly provided by Y. Groner and D. Levanon (Weizmann Institute, Rehovot))|BMiFLT3 (15-3) cells Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX253099 anti-P300 Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX253098 anti-Runx1 Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX253097 non-immune serum InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX252184 H3K27me3 antibody His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX252183 H3K4me3 antibody His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248913 anti-Rabbit IgG antibody (sc-2027, Santa Cruz)|E14 cells_IgG_IP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248912 anti-ZNF322 antibody (sc-102205, Santa Cruz)|E14 cells_Zfp322a_IP Oth@ Zfp322a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248471 whole serum from normal nonimmunized rabbits|naive_IgG_nave InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248470 none|vehicle_Input_Veh InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248469 AcH4K12|HD-82Q_AcH4K12_ChIPseq His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248468 AcH4K12|WT_AcH4K12_ChIPseq His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248467 AcH3K9,14|HD-82Q_AcH3K9,14_ChIPseq His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248466 AcH3K9,14|WT_AcH3K9,14_ChIPseq His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248402 anti-V5 antibody (Cat# R960-CUS, Life Technologies, Carlsbad, CA)|Klf3-/- murine embryonic fibroblasts, rescued with DBD-V5 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248401 none|Klf3-/- murine embryonic fibroblasts, rescued with DBD-V5 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248400 anti-V5 antibody (Cat# R960-CUS, Life Technologies, Carlsbad, CA)|Klf3-/- murine embryonic fibroblasts, rescued with ?DL-V5 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248399 none|Klf3-/- murine embryonic fibroblasts, rescued with ?DL-V5 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248398 anti-V5 antibody (Cat# R960-CUS, Life Technologies, Carlsbad, CA)|Klf3-/- murine embryonic fibroblasts, rescued with Klf3-V5 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248397 none|Klf3-/- murine embryonic fibroblasts, rescued with Klf3-V5 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248302 ESE-3A (E-15) antibody Santa Cruz Biotechnology, Catalog# sc-15450, Lot# I1704|mouse corneal epithelium Oth@ Ehf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248301 none|mouse corneal epithelium InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248287 Nanog (Santa Cruz)|Mouse embryoid bodies Oth@ Nanog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248286 Nanog (Santa Cruz)|Mouse embryonic stem cells Oth@ Nanog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248285 Tbx3 (Santa Cruz)|Mouse embryoid bodies Oth@ Tbx3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248284 Tbx3 (Santa Cruz)|Mouse embryonic stem cells Oth@ Tbx3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248279 2010-4428_101222_HWI-EAS146_0319_s_3_sequence Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX248278 Monoclonal ANTI-FLAG M2 antibody|2011-947_110806_SN484_0108_AD0BT3ABXX_2_sequence Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX247748 a.a. 5-24 of human CREB|17-600 (Millipore)|3T3-L1 cells (ATCC #CL-173) Oth@ Creb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX247303 ATF4 CREB-2 (C-20): sc-200, Lot#J2011|ATF4_ChIP-seq Oth@ Atf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX247302 CEBPb CEBP B:(C-19): sc-150, lot:#I1010|CEBPB_Tg_ChIP-seq Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX247301 CEBPb CEBP B:(C-19): sc-150, lot:#I1010|CEBPB_ChIP-seq Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX246933 none|none|C2C12-diff-60h-1pFA+EGS-Input-60h-11132 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX246932 none|none|C2C12-diff-60h-1pFA-Input-11610 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX246931 myogenin|Santa Cruz; sc-12732|C2C12-diff-60h-myogenin-12152 Oth@ Myog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX246930 myogenin|Santa Cruz; sc-12732|C2C12-diff-60h-myogenin-10598 Oth@ Myog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX246929 myogenin|Santa Cruz; sc-12732|C2C12-diff-60h-myogenin-10158 Oth@ Myog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX246928 MyoD|Santa Cruz; sc-32758|C2C12-diff-60h-MyoD-10480 Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX245511 none|splenic Plasmablasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX245510 CTCF|splenic Plasmablasts Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX245509 none|splenic B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX245508 CTCF|splenic B cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX244356 immunoglobulin G InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX244355 anti-RNA polymerase II Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX244353 anti-A-MYB Oth@ Myb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX244278 H3K79me2|DP thymocytes His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX243599 H3K4me3|Dnmt1-/-_MEFs_H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX243598 H3K4me3|Dnmt1+/+_MEFs_H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX243597 H3K27me3|Dnmt1-/-_MEFs_H3K27me3 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX243596 H3K27me3|Dnmt1+/+_MEFs_H3K27me3 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX237511 rabbit polyclonal anti-RNA polymerase II CTD repeat YSPTSPS (phospho S5) (Abcam ab5131)|whole testis 16dpp Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX237510 rabbit polyclonal anti-RNA polymerase II (N-20) (santa cruz sc-899)|whole testis 10dpp Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX237509 none, input|whole testis 16dpp InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX237508 none, input|whole testis 6dpp InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236484 None|None WCE|myotubes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236483 Cdk9|Santa Cruz SC-8338,SC-484|Embryonic stem cells Oth@ Cdk9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236481 Suz12|Abcam AB12073|Embryonic stem cells Oth@ Suz12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236480 H3K4me3|Abcam AB8580|Embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236479 None|Input INPUT|Embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236478 Nanog|Bethyl A300-397A|Embryonic stem cells Oth@ Nanog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236477 Sox2|R&D Systems MAB2018|Embryonic stem cells Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236476 Oct4|Santa Cruz SC-8628X|Embryonic stem cells Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236086 none|Mouse adult hybrid brain InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX236085 PolII-S5p, Abcam ab5131|Mouse adult hybrid brain Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX234789 none (input)|mouse pre-iPSC input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX234788 none (input)|mouse ESC input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX234787 Cbx3- Millipore- 05-690; clone 42s2|mouse pre-iPSC / Cbx3 IP Oth@ Cbx3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX234786 Cbx3- Millipore- 05-690; clone 42s2|mouse ESC / Cbx3 IP Oth@ Cbx3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX225202 none (sonicated chromatin that is directly de-crosslinked without any IP) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX225200 KAP1 affinity-purified rabbit polyclonal antibody raised against KAP1 aa 20418, RBCC (F. R. Santoni de Sio et al.,. Blood 119, 4675 (2012)) Oth@ Trim28 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX221733 Millipore 09-838|Sperm His@ H3.3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX220933 none|Th17 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX220932 TSC22D3|Th17 cells Oth@ Tsc22d3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX219897 PPARg|Epididymal White Adipose Tissue Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX219896 PPARg|Brown Adipose Tissue Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX219257 H3K4me2|Spermatids His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX219256 H3K4me2|Spermatocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX219255 H3K4me2|Testis His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX219254 H3K4me2|Liver His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX219253 H3K4me2|Brain His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX218536 Santa Cruz Tech. rIgG (sc-2027) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX218535 Epitomics ERR (2131-1) Oth@ Esrra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX218534 Abcam mTOR ChIP grade (ab32028) Oth@ Mtor 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX218272 anti-FLAG|mouse embryonic stem cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX218196 Input_ChIRP-seq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX218195 Snord116del_brain_NSC_ChIRP-seq Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX218194 Snord116del_brain_116HG_ChIRP-seq Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX218192 WT_brain_NSC_ChIRP-seq Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX217132 DHS|Splenic B Cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216313 whole serum from normal nonimmunized rabbits InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216312 Veh Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216311 H3K4me3; Anti-trimethyl-Histone H3 (Lys4) Antibody|nave_H3K4me3_ChIPseq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216290 IgG (Santa Cruz, sc-2027, lot J2909)|STHdhQ111 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216289 IgG (Santa Cruz, sc-2027, lot J2909)|STHdhQ7 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216288 Sox2 (R&D, MAB2018, lot KGQ0311111)|STHdhQ7 Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216287 Jund (Santa Cruz, sc-74x, lot B0111)|STHdhQ111 Oth@ Jund 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216286 Jund (Santa Cruz, sc-74x, lot B0111)|STHdhQ7 Oth@ Jund 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216285 Fra-2 (Santa Cruz, sc-604x, lot I0210)|STHdhQ111 Oth@ Fosl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216284 Fra-2 (Santa Cruz, sc-604x, lot I0210)|STHdhQ7 Oth@ Fosl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216177 C57BL/6J mouse mammary gland Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX216176 ERalpha|C57BL/6J mouse mammary gland Oth@ Esr1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX214069 Sox17|none|F9+RA cells Oth@ Sox17 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX214068 Pou5f1/Oct4|none|F9+RA cells Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX214067 Pou5f1/Oct4|none|F9 cells Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213856 Abcam|ab4729|lung adenocarcinoma His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213834 Spt5 (H-300) (sc-28678), Santa Cruz Biotechnology|Jmjd2c KD mESCs Oth@ Supt5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213833 RNA Pol II Ser5p, CTD4H8 (MMS-128P), Covance|Jmjd2c KD mESCs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213832 RNA Pol II Ser2p, clone 3E10 (04-1571), Millipore|Jmjd2c KD mESCs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213831 RNA Pol II 8WG16 (MMS-126R), Covance|Jmjd2c KD mESCs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213830 Oct4(N-19)(sc-8628), Santa Cruz Biotechnology|Jmjd2c KD mESCs Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213829 Nanog (A300-397A), Bethyl Laboratories|Jmjd2c KD mESCs Oth@ Nanog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213828 cMyc (9402), Cell signaling|Jmjd2c KD mESCs Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213827 H3K9me3 (ab8898), Abcam|Jmjd2c KD mESCs His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213826 H3K4me3 (ab1012), Abcam|Jmjd2c KD mESCs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213825 H3K36me3 (ab9050), Abcam|Jmjd2c KD mESCs His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213824 H3K27me3 (ab6002), Abcam|Jmjd2c KD mESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213823 ChIPAb+ Ezh2, clone AC22 (17-662), Millipore|Jmjd2c KD mESCs Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213822 Ctr9 (A301-395A), Bethyl Laboratories|Jmjd2c KD mESCs Oth@ Ctr9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213821 Oct4(N-19)(sc-8628), Santa Cruz Biotechnology|Jmjd2b KD mESCs Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213819 cMyc (9402), Cell signaling|Jmjd2b KD mESCs Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213818 H3K9me3 (ab8898), Abcam|Jmjd2b KD mESCs His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213817 H3K4me3 (ab1012), Abcam|Jmjd2b KD mESCs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213816 H3K36me3 (ab9050), Abcam|Jmjd2b KD mESCs His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213815 H3K27me3 (ab6002), Abcam|Jmjd2b KD mESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213814 H3K27ac (ab4729), Abcam|Jmjd2b KD mESCs His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213813 Spt5 (H-300) (sc-28678), Santa Cruz Biotechnology|Anti-GFP KD mESCs Oth@ Supt5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213812 RNA Pol II Ser5p, CTD4H8 (MMS-128P), Covance|Anti-GFP KD mESCs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213811 RNA Pol II Ser2p, clone 3E10 (04-1571), Millipore|Anti-GFP KD mESCs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213810 RNA Pol II 8WG16 (MMS-126R), Covance|Anti-GFP KD mESCs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213809 Oct4(N-19)(sc-8628), Santa Cruz Biotechnology|Anti-GFP KD mESCs Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213808 Nanog (A300-397A), Bethyl Laboratories|Anti-GFP KD mESCs Oth@ Nanog 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213807 cMyc (9402), Cell signaling|Anti-GFP KD mESCs Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213806 H3K9me3 (ab8898), Abcam|Anti-GFP KD mESCs His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213805 H3K4me3 (ab1012), Abcam|Anti-GFP KD mESCs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213804 H3K36me3 (ab9050), Abcam|Anti-GFP KD mESCs His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213803 H3K27me3 (ab6002), Abcam|Anti-GFP KD mESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213802 H3K27ac (ab4729), Abcam|Anti-GFP KD mESCs His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213801 ChIPAb+ Ezh2, clone AC22 (17-662), Millipore|Anti-GFP KD mESCs Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213800 Ctr9 (A301-395A), Bethyl Laboratories|Anti-GFP KD mESCs Oth@ Ctr9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213798 H3K4me3 (ab1012), Abcam|Mouse ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213796 H3K27me3 (ab6002), Abcam|Mouse ES cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213795 None|Mouse ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213794 ChIP-ed with Streptavidin beads|Mouse ES cells with BirA ligase Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213793 Biotinylated protein ChIP-ed with Streptavidin beads|Biotinylated Jmjd2c mouse ES cells, with BirA ligase Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213792 Biotinylated protein ChIP-ed with Streptavidin beads|Biotinylated Jmjd2b mouse ES cells, with BirA ligase Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213541 Mef2Da2 antibody control (antibody blocked with peptide)|C2C12 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213540 Mef2Da1 antibody control (antibody blocked with peptide) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213539 Mef2Da2|C2C12 Oth@ Mef2d 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213538 Mef2Da1|C2C12 Oth@ Mef2d 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX213393 Histone H3 dimethyl Lys9 His@ H3K9me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX212988 Mash1|spinal cord at embryonic day 12.5 Oth@ Ascl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX212328 MNase digested input|differentiated ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX212327 MNase digested input|embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX212326 H4K16ac ChIP|differentiated ES cells His@ H4K16ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX212325 H4K16ac ChIP|embryonic stem cells His@ H4K16ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX212082 anti-Ldb1 antibody N-18, Santa Cruz|hemangioblast equivalent cells Oth@ Ldb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX211469 IgG, Sigma, I8140|Hematopoietic Stem Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX211468 Cebpa, Santa Cruz 14-AA|Hematopoietic Stem Cells Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209672 acCBP/p300 (rabbit polyclonal, Cell Signaling Technology, catalog number |mouse postnatal (P0) cortex Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209671 p300 (rabbit polyclonal antip300 (C20), Santa Cruz Biotechnology, catalog number |Mouse embryonic day 11.5 (e11.5) forebrain Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209469 Scl/Tal1 Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209468 Ldb1 Oth@ Ldb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209336 H3K4me1|Day2 differentiating rtta ESCs, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209331 H3K4me1|Day2 differentiating Teto-Brn2 ESCs, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209316 Sox2|Embryonic stem cells, Sox2 ChIP Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209315 none|ES-derived neural progenitor cells, WCE InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX209212 H3K9me3|Millipore #CS200604|NAc dissection from 3-5 animals His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX208066 mouse ES cells, shMLL4, H2AZ ChIP His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX208064 mouse ES cells, shluc control, H2AZ ChIP His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX208062 mouse ES cells, shH2A.Z, RARa-ChIP Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX208055 mouse ES cells, shluc control, RARa-ChIP Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX207544 Van Der Heijden et al. Nature Genetics, 2007, pubmed ID:17237782|Round spermatids Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX207543 Millipore 17-10245|Round spermatids His@ H3.3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX207541 Sperm Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX207534 Millipore 17-10245|Sperm His@ H3.3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206846 E13.5 embryos derived Mouse Embryonic Fibroblasts Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206482 none (Input)|Liver tissue InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206425 Gfi1|MAST Oth@ Gfi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206424 Gata2|MAST Oth@ Gata2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206421 Millipore, #3637|Embryonic stem cells (E14) Oth@ Rybp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206420 Abcam, ab12073|Embryonic stem cells (E14) Oth@ Suz12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206419 Abcam, ab21873|Embryonic stem cells (E14) Oth@ Cbx7 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206418 Ab generated in Di Croces lab|Embryonic stem cells (E14) Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX206369 Med1/TRAP220 (Bethyl, Catalog No.A300-793A)|pro-B cell Oth@ Med1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205966 RPA|MEF Oth@ Rpa1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205536 H3K27ac|mouse_E11.5_HL His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205535 H3K27ac|mouse_E11.5_FL His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205534 H3K27ac|mouse_E10.5_HL His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205533 H3K27ac|mouse_E10.5_FL His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205520 mouse_E11.5_HL Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205519 mouse_E11.5_FL Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205518 mouse_E10.5_HL Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX205517 mouse_E10.5_FL Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204724 Egr1|Egr1 36h Oth@ Egr1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204723 IgG Mock|IgG Mock 0h InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204722 RNA Polymerase II|RNA Polymerase II 168h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204721 RNA Polymerase II|RNA Polymerase II 48h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204720 RNA Polymerase II|RNA Polymerase II 36h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204719 RNA Polymerase II|RNA Polymerase II 24h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204718 RNA Polymerase II|RNA Polymerase II 16h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204717 RNA Polymerase II|RNA Polymerase II 8h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204716 RNA Polymerase II|RNA Polymerase II 3h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204715 RNA Polymerase II|RNA Polymerase II 0h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204714 C/EBPbeta|C/EBPbeta 168h Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204713 C/EBPbeta|C/EBPbeta 48h Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204712 C/EBPbeta|C/EBPbeta 36h Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204711 C/EBPbeta|C/EBPbeta 24h Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204710 C/EBPbeta|C/EBPbeta 16h Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204709 C/EBPbeta|C/EBPbeta 8h Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204708 C/EBPbeta|C/EBPbeta 3h Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204707 C/EBPbeta|C/EBPbeta 0h Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204706 C/EBPalpha|C/EBPalpha 168h Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204705 C/EBPalpha|C/EBPalpha 48h Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204704 C/EBPalpha|C/EBPalpha 36h Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204703 C/EBPalpha|C/EBPalpha 24h Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204702 C/EBPalpha|C/EBPalpha 16h Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204701 C/EBPalpha|C/EBPalpha 8h Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204700 C/EBPalpha|C/EBPalpha 3h Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204647 none|iPS cell from TTF cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204646 none|iPS cell from PF cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204645 No-Antibody IgG control sample Seq|ES cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204383 none|primary megakaryocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204382 anti-p45 antibody by Bresnick EH|primary megakaryocytes Oth@ Nfe2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204345 H3K4me2(Millipore, Cat. No. 07-030, Lot No. DAM1724042)|Embryonic cortex His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204344 H3K27ac (Abcam, Cat. No. ab4729, Lot No. GR46123)|Embryonic cortex His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204343 Smc1a (Bethyl, Cat. No. A300-055A, Lot No. A300-055A-3)|Embryonic cortex Oth@ Smc1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204336 CTCF (Millipore, Cat. No. 07-729, Lot No. JCB1881349)|Limb bud Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204331 H3K27me3 (Millipore, Cat. No. 07-449, Lot No. JCB1873477)|Limb bud His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204330 H3K4me2(Millipore, Cat. No. 07-030, Lot No. DAM1724042)|Limb bud His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204146 Cdx2 (Bethyl Labs, A300-691-A, lot A300-691-A1)|Trophoblast stem cells Oth@ Cdx2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204139 H3K4me1 (Abcam, ab8895, lot 962583)|Trophoblast stem cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX204136 H3K4me3 (ActiveMotif, 39159, lot 1609004)|Trophoblast stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203226 input chromatin|Thymocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203225 input chromatin|Mature granulocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203224 input chromatin|Immature granulocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203223 input chromatin|Mature Erytrhoid InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203222 input chromatin|Immature Erythroid InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203221 input chromatin|Mature Megakaryocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203220 input chromatin|Immature Megakaryocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203219 input chromatin|HSC InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203218 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1724042|Thymocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203217 PU.1, antibody vendor, cat #, lot #: Santa Cruz, sc-352, D2011|Immature granulocytes Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203216 H3K427ac, antibody vendor, cat #, lot #: Abcam, ab4729, 509313|Immature granulocytes His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203215 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1724042|Mature granulocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203214 Immature granulocytes Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203213 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1724042|Immature granulocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203212 H3K427ac, antibody vendor, cat #, lot #: Abcam, ab4729, 509313|Immature Erythroid His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203211 NF-E2 TB16+TB17, home made|Immature Erythroid Oth@ Nfe2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203210 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1570816|Mature Erytrhoid His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203209 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1570816|Immature Erythroid His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203208 NF-E2 TB16+TB17, home made|Mature Megakaryocytes Oth@ Nfe2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203207 NF-E2 TB16+TB17, home made|Immature Megakaryocytes Oth@ Nfe2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203206 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1570816|Mature Megakaryocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203205 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1570816|Immature Megakaryocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203204 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1724042|MEP His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203203 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1724042|GMP His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203202 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1724042|CMP His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203201 H3K4me2, antibody vendor, cat#, lot #: Millipore, 07-030, DAM1724042|HSC His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203133 H3K27me3 (Millipore, 07-449)|Th17 cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203132 H3K27me3 (Millipore, 07-449)|Th1 cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203131 H3K4me2 (Millipore, 07-030)|Th17 cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203130 H3K4me2 (Millipore, 07-030)|Th1 cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203129 H3K27me3 (Millipore, 07-449)|CD27-CCR6+ gd T cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203128 H3K27me3 (Millipore, 07-449)|CD27+ gd T cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203127 H3K4me2 (Millipore, 07-030)|CD27-CCR6+ gd T cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX203126 H3K4me2 (Millipore, 07-030)|CD27+ gd T cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202957 rabbit anti-PU.1 antibody (sc-352, Santa Cruz)|Tot2 cells, MSCV-IRF8 transduced, Day3 Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202801 anti-TBP (abcam 62126)|C3H10T1/2 mouse cells Oth@ Tbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202800 anti-TBP (abcam 62126)|adipocytes differentiated from C3H10T1/2 mouse cells Oth@ Tbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202799 TAF7L (in-house)|C3H10T1/2 mouse cells Oth@ Taf7l 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202798 TAF7L (in-house)|adipocytes differentiated from C3H10T1/2 mouse cells Oth@ Taf7l 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202797 PPAR (sc-7196)|C3H10T1/2 mouse cells Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202796 PPAR (sc-7196)|adipocytes differentiated from C3H10T1/2 mouse cells Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202795 Pol II (monoclonal 8GW16, protein-A purified)|C3H10T1/2 mouse cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202794 Pol II (monoclonal 8GW16, protein-A purified)|adipocytes differentiated from C3H10T1/2 mouse cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202793 IgG (in-house)|C3H10T1/2 mouse cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202792 IgG (in-house)|adipocytes differentiated from C3H10T1/2 mouse cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202277 none|MEF MLL3(+/+) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202276 (rb) -H3K4me1 (39297;Active Motif)|MEF MLL3(+/+) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202275 (rb) -H3K27me3 (39155; Active Motif)|MEF MLL3(+/+) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202274 none|MEF MLL3(-/-) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202273 (rb) -H3K4me1 (39297;Active Motif)|MEF MLL3(-/-) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202272 (rb) -H3K27me3 (39155; Active Motif)|MEF MLL3(-/-) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202271 none|MEF MLL1(+/+) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202270 (rb) -H3K4me1 (39297;Active Motif)|MEF MLL1(+/+) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202269 (rb) -H3K27me3 (39155; Active Motif)|MEF MLL1(+/+) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202268 none|MEF MLL1(-/-) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202267 (rb) -H3K4me1 (39297;Active Motif)|MEF MLL1(-/-) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202266 (rb) -H3K27me3 (39155; Active Motif)|MEF MLL1(-/-) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202012 MC3T3-E1 cells differentiated for 15 days Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX202011 MC3T3-E1 cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX199993 Rag1 -/- with TCRb transgene, thymocytes Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX199992 Anti-CTCF Antibody|Rag1 -/- with TCRb transgene, thymocytes Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX199985 Anti-CTCF Antibody|Rag1 -/- pro-B cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX199974 Rag1 -/- CD4-CD8- (DN) thymocytes Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX199973 Anti-CTCF Antibody|Rag1 -/- CD4-CD8- (DN) thymocytes Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX198050 H2B S112 GlcNAc antibody|Mouse ES cell His@ H2S112GlcNAc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX198049 OGT antibody|Mouse ES cell Oth@ Ogt 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX198048 in-house made mouse TET2 antibody|Mouse ES cell Oth@ Tet2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197292 anti-Stat1|Primary bone marrow-derived macrophages, IFNg for 4hrs, Stat1 ChIP Oth@ Stat1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197290 anti-JunB|Primary bone marrow-derived macrophages, LPS for 4hrs, JunB ChIP Oth@ Junb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197289 anti-JunB|Primary bone marrow-derived macrophages, no treatment, JunB ChIP Oth@ Junb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197288 anti-Stat1|Primary bone marrow-derived macrophages, IFNg for 2hrs, Stat1 ChIP Oth@ Stat1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197287 anti-Stat1|Primary bone marrow-derived macrophages, IFNg for 1hrs, Stat1 ChIP Oth@ Stat1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197286 anti-Stat1|Primary bone marrow-derived macrophages, IFNg for 30min, Stat1 ChIP Oth@ Stat1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197284 anti-PU.1 (rabbit polyclonal against the N-terminus (aa. 1-100))|Primary bone marrow-derived macrophages, IFNg for 2hrs, PU.1 ChIP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197283 anti-PU.1 (rabbit polyclonal against the N-terminus (aa. 1-100))|Primary bone marrow-derived macrophages, IFNg for 1hrs, PU.1 ChIP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197282 anti-PU.1 (rabbit polyclonal against the N-terminus (aa. 1-100))|Primary bone marrow-derived macrophages, IFNg for 30min, PU.1 ChIP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197280 anti-H3K4me1|Primary bone marrow-derived macrophages, IFNg for 2hrs, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197279 anti-H3K4me1|Primary bone marrow-derived macrophages, IFNg for 1hrs, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197278 anti-H3K4me1|Primary bone marrow-derived macrophages, IFNg for 30min, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197276 anti-Stat6|Primary bone marrow-derived macrophages, IL4 for 4hrs, Stat6 ChIP Oth@ Stat6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197275 anti-Stat6|Primary bone marrow-derived macrophages, IL4 for 2hrs, Stat6 ChIP Oth@ Stat6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197274 anti-Stat6|Primary bone marrow-derived macrophages, IL4 for 1hrs, Stat6 ChIP Oth@ Stat6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197273 anti-Stat6|Primary bone marrow-derived macrophages, IL4 for 30min, Stat6 ChIP Oth@ Stat6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197272 anti-Stat6|Primary bone marrow-derived macrophages, IL4 for 15min, Stat6 ChIP Oth@ Stat6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197271 anti-Stat6|Primary bone marrow-derived macrophages, no treatment, Stat6 ChIP Oth@ Stat6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197269 anti-H3K27ac|Primary bone marrow-derived macrophages, IL4 for 2hrs, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197268 anti-H3K27ac|Primary bone marrow-derived macrophages, IL4 for 1hrs, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197267 anti-H3K27ac|Primary bone marrow-derived macrophages, IL4 for 30min, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197266 anti-H3K27ac|Primary bone marrow-derived macrophages, IL4 for 15min, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197263 anti-H3K4me1|Primary bone marrow-derived macrophages, IL4 for 2hrs, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197262 anti-H3K4me1|Primary bone marrow-derived macrophages, IL4 for 1hrs, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197261 anti-H3K4me1|Primary bone marrow-derived macrophages, IL4 for 30min, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197260 anti-H3K4me1|Primary bone marrow-derived macrophages, IL4 for 15min, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197246 anti-H3K4me1|Primary bone marrow-derived macrophages, IFNg for 24hrs, then washed, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197245 anti-H3K4me1|Primary bone marrow-derived macrophages, IFNg for 72hrs, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197242 anti-H3K4me1|Primary bone marrow-derived macrophages, IL4 for 24hrs, then washed, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX197241 anti-H3K4me1|Primary bone marrow-derived macrophages, IL4 for 72hrs, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX195704 custom produced rabbit polyclonal PHF19|Embryonic stem cells Oth@ Phf19 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX195319 H3K27me3 - Millipore, #07450|H3K27me3-ShPhf19_ChIPSeq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX195318 H3K27me3 - Millipore, #07449|H3K27me3-ShRd_ChIPSeq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX195317 Suz12 - Abcam, #12073|Suz12_ChIPSeq Oth@ Suz12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX195316 H3K36me2 - Abcam, #9049|H3K36me2_ChIPSeq His@ H3K36me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX195315 H3K36me3 - Abcam, #9050|H3K36me3_ChIPSeq His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193725 none|intestinal villus cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193724 H3K79me2 antibody: Abcam ab3594 (lot number 121826)|intestinal villus cells His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193723 none|intestinal Lgr5(hi) stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193722 H3K79me2 antibody: Abcam ab3594 (lot number 121826)|intestinal Lgr5(hi) stem cells His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193442 anti-PPAR (sc-7196; Santa Cruz)|BAT-derived adipocytes Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193441 anti-PPAR (sc-7196; Santa Cruz)|iWAT-derived adipocytes Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193440 anti-PPAR (sc-7196; Santa Cruz)|eWAT-derived adipocytes Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193355 H3K9me3|3T3-L1 preadipocytes His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193354 H3K9me2|3T3-L1 preadipocytes His@ H3K9me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193353 H3K27me3|3T3-L1 preadipocytes His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX193352 H3K4me3|3T3-L1 preadipocytes His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX192097 Input DNA|TS cells_Input G1 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX192096 anti-H2A|ChIPreChIP DNA|TS cells_reChIP H2A M His@ H2A 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX192095 anti-H2A|ChIPreChIP DNA|TS cells_reChIP H2A S His@ H2A 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX192094 anti-H2A|ChIPreChIP DNA|TS cells_reChIP H2A G1 His@ H2A 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX192093 H2A.Z antibodies produced in-house PMID:12660166|ChIP DNA|TS cells_H2A.Z M His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX192092 H2A.Z antibodies produced in-house PMID:12660166|ChIP DNA|TS cells_H2A.Z S His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX192091 H2A.Z antibodies produced in-house PMID:12660166|ChIP DNA|TS cells_H2A.Z G1 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX191946 BD pharmingen, L97-56, lot 17576|ES_Dex-_DKO_ChIPSeq Oth@ Gata4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX191945 BD pharmingen, L97-56, lot 17576|ES_Dex-_Wild-type_ChIPSeq Oth@ Gata4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX191068 IgG|Control mouse ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX191067 Ezh2|5246|Kdm2b knockdown mouse ES cells Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX191066 Ezh2|5246|Control mouse ES cells Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX190467 Histone H3 dimethyl Lys4 antibody (ACTIVE MOTIF, 39141)|Neural progenitor like cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX190172 mouse_e11.5_heart_control Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX190171 mouse_e11.5_heart_smarca4-flag Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX190170 mouse_e11.5_hindbrain_smarca4-flag Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX190169 mouse_ESC_smarca4-flag Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX189752 Rabbit IgG, sigma|E8.5 head InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188830 ZC3H11A_(NB100-74650)|NB100-74650|ZC3H11A is a C3H1-type zinc finger protein. ZC3H11A has been identified as a protein that is phosphorylated upon DNA damage by ATM or ATR. The function of ZC3H11A remains uncharacterized.|Rabbit polyclonal antibody. The immunogen recognized by this antibody maps to a region between residue 250 and 300 of human zinc finger CCCH-type containing 11A.|ES-E14 Oth@ Zc3h11a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188829 MafK_(ab50322)|ab50322|NFE2 DNA-binding activity consists of a heterodimer containing an 18-kD Maf protein (MafF, MafG, or MafK) and p45. Both subunits are members of the activator protein-1 superfamily of basic leucine zipper (bZIP)proteins. Since they lack a putative transactivation domain, small Mafs behave as transcriptional repressors when they dimerize among themselves. They serve as transcriptional activators by dimerizing with other (usually larger) bZip proteins and recruiting them to specific DNA-binding sites.|Rabbit polyclonal. Raised against synthetic peptide: TTNPKPNKALKVKKEA conjugated to KLH by a C-terminal Cysteine residue linker, corresponding to amino acids 2-17 of Human MAFK. Antibody Target: MafK|ES-E14 Oth@ Mafk 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188827 ZNF384_(HPA004051)|HPA004051|This gene encodes a C2H2-type zinc finger protein, which may function as a transcription factor. This gene also contains long CAG trinucleotide repeats that encode consecutive glutamine residues. The protein appears to bind and regulate the promoters of the extracellular matrix genes MMP1, MMP3, MMP7 and COL1A1. Studies in mouse suggest that nuclear matrix transcription factors (NP/NMP4) may be part of a general mechanical pathway that couples cell construction and function during extracellular matrix remodeling. Alternative splicing results in multiple transcript variants. Recurrent rearrangements of this gene with the Ewing's sarcoma gene, EWSR1 on chromosome 22, or with the TAF15 gene on chromosome 17, or with the TCF3 (E2A) gene on chromosome 19, have been observed in acute leukemia. A related pseudogene has been identified on chromosome 7.|Rabbit polyclonal generated using the immunogen: Zinc finger protein 384 recombinant protein epitope signature tag (PrEST)|ES-E14 Oth@ Zfp384 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188825 CHD1_(NB100-60411)|NB100-60411|ATP-dependent chromatin-remodeling factor which functions as substrate recognition component of the transcription regulatory histone acetylation (HAT) complex SAGA. Regulates polymerase II transcription. Also required for efficient transcription by RNA polymerase I, and more specifically the polymerase I transcription termination step. Also required to maintain a specific chromatin configuration across the genome. Is also associated with histone deacetylase (HDAC) activity (By similarity). Required for the bridging of SNF2, the FACT complex, the PAF complex as well as the U2 snRNP complex to H3K4me3. Required for maintaining open chromatin and pluripotency in embryonic stem cells|Rabbit polyclonal, The epitope recognized by this antibody maps to a region between residue 1660 and 1710 of human chromodomain helicase DNA binding protein 1 using the numbering given in entry NP_001261.2 (GeneID 1105). Antibody Target: CHD1|MEL Oth@ Chd1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188824 GCN5|Missing|KAT2A, or GCN5, is a histone acetyltransferase (HAT) that functions primarily as a transcriptional activator. Acetylation of histones gives a specific tag for epigenetic transcription activation. In case of HIV-1 infection, it is recruited by the viral protein Tat. Regulates Tat's transactivating activity and may help inducing chromatin remodeling of proviral genes. Component of the SAGA and ATAC complexes, complexes with histone acetyltransferase activities on histones H3 and H4|Rabbit polyclonal anti-GCN5 antibody (2676), Immunogen : synthetic peptide coupled to Ovalbumin (sequence-MAEPSQAPTPAPAAQPRPLC). Antibody Target: GCN5|MEL Oth@ Kat2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188823 CHD1_(NB100-60411)|NB100-60411|ATP-dependent chromatin-remodeling factor which functions as substrate recognition component of the transcription regulatory histone acetylation (HAT) complex SAGA. Regulates polymerase II transcription. Also required for efficient transcription by RNA polymerase I, and more specifically the polymerase I transcription termination step. Also required to maintain a specific chromatin configuration across the genome. Is also associated with histone deacetylase (HDAC) activity (By similarity). Required for the bridging of SNF2, the FACT complex, the PAF complex as well as the U2 snRNP complex to H3K4me3. Required for maintaining open chromatin and pluripotency in embryonic stem cells|Rabbit polyclonal, The epitope recognized by this antibody maps to a region between residue 1660 and 1710 of human chromodomain helicase DNA binding protein 1 using the numbering given in entry NP_001261.2 (GeneID 1105). Antibody Target: CHD1|CH12 Oth@ Chd1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188822 GCN5|Missing|KAT2A, or GCN5, is a histone acetyltransferase (HAT) that functions primarily as a transcriptional activator. Acetylation of histones gives a specific tag for epigenetic transcription activation. In case of HIV-1 infection, it is recruited by the viral protein Tat. Regulates Tat's transactivating activity and may help inducing chromatin remodeling of proviral genes. Component of the SAGA and ATAC complexes, complexes with histone acetyltransferase activities on histones H3 and H4|Rabbit polyclonal anti-GCN5 antibody (2676), Immunogen : synthetic peptide coupled to Ovalbumin (sequence-MAEPSQAPTPAPAAQPRPLC). Antibody Target: GCN5|CH12 Oth@ Kat2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188821 MAZ_(ab85725)|ab85725|May function as a transcription factor with dual roles in transcription initiation and termination. Binds to two sites, ME1a1 and ME1a2, within the MYC promoter having greater affinity for the former. Also binds to multiple G/C-rich sites within the promoter of the Sp1 family of transcription factors.|Rabbit polyclonal, immunogen is synthetic peptide, corresponding to a region within amino acids 427-477 of Human MAZ, GenBank BAA33064.1. Antibody Target: MAZ|CH12 Oth@ Maz 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188820 Nrf2|sc-22810|epitope corresponding to amino acids 1-180 mapping at the N-terminus of GABP-alpha of human origin|Rabbit polyclonal IgG. Antibody Target: Nrf2|CH12 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188819 HCFC1_(NB100-68209)|NB100-68209|The epitope recognized by this antibody maps to a region between residue 1700 and 1750 of human host cell factor C1 (VP16-accessory protein).|Rabbit polyclonalantibody against residue 1700 and 1750 of human host cell factor C1|ES-E14 Oth@ Hcfc1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188818 ZNF-MIZD-CP1_(ab65767)|ab65767|Zinc finger MIZ domain-containing protein 1 that increases ligand-dependent transcriptional activity of AR and promotes AR sumoylation. The stimulation of AR activity is dependent upon sumoylation.|Rabbit Polyclonal against synthetic peptide conjugated to KLH derived from within residues 200 - 300 of Human Zinc finger MIZ domain-containing protein 1.|MEL Oth@ Zmiz1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188817 ZNF384_(HPA004051)|HPA004051|This gene encodes a C2H2-type zinc finger protein, which may function as a transcription factor. This gene also contains long CAG trinucleotide repeats that encode consecutive glutamine residues. The protein appears to bind and regulate the promoters of the extracellular matrix genes MMP1, MMP3, MMP7 and COL1A1. Studies in mouse suggest that nuclear matrix transcription factors (NP/NMP4) may be part of a general mechanical pathway that couples cell construction and function during extracellular matrix remodeling. Alternative splicing results in multiple transcript variants. Recurrent rearrangements of this gene with the Ewing's sarcoma gene, EWSR1 on chromosome 22, or with the TAF15 gene on chromosome 17, or with the TCF3 (E2A) gene on chromosome 19, have been observed in acute leukemia. A related pseudogene has been identified on chromosome 7.|Rabbit polyclonal generated using the immunogen: Zinc finger protein 384 recombinant protein epitope signature tag (PrEST)|MEL Oth@ Zfp384 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188816 ZNF384_(HPA004051)|HPA004051|This gene encodes a C2H2-type zinc finger protein, which may function as a transcription factor. This gene also contains long CAG trinucleotide repeats that encode consecutive glutamine residues. The protein appears to bind and regulate the promoters of the extracellular matrix genes MMP1, MMP3, MMP7 and COL1A1. Studies in mouse suggest that nuclear matrix transcription factors (NP/NMP4) may be part of a general mechanical pathway that couples cell construction and function during extracellular matrix remodeling. Alternative splicing results in multiple transcript variants. Recurrent rearrangements of this gene with the Ewing's sarcoma gene, EWSR1 on chromosome 22, or with the TAF15 gene on chromosome 17, or with the TCF3 (E2A) gene on chromosome 19, have been observed in acute leukemia. A related pseudogene has been identified on chromosome 7.|Rabbit polyclonal generated using the immunogen: Zinc finger protein 384 recombinant protein epitope signature tag (PrEST)|CH12 Oth@ Zfp384 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188815 HCFC1_(NB100-68209)|NB100-68209|The epitope recognized by this antibody maps to a region between residue 1700 and 1750 of human host cell factor C1 (VP16-accessory protein).|Rabbit polyclonalantibody against residue 1700 and 1750 of human host cell factor C1|CH12 Oth@ Hcfc1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188814 BHLHE40_(NB100-1800)|NB100-1800|This gene encodes a basic helix-loop-helix protein expressed in various tissues. Expression in the chondrocytes is responsive to the addition of Bt2cAMP. The encoded protein is believed to be involved in the control of cell differentiation.|Rabbit polyclonal, maps to a region between residues 350 and the C-terminus (residue 412). Antibody Target: BHLHE40|MEL Oth@ Bhlhe40 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188813 ZNF-MIZD-CP1_(ab65767)|ab65767|Zinc finger MIZ domain-containing protein 1 that increases ligand-dependent transcriptional activity of AR and promotes AR sumoylation. The stimulation of AR activity is dependent upon sumoylation.|Rabbit Polyclonal against synthetic peptide conjugated to KLH derived from within residues 200 - 300 of Human Zinc finger MIZ domain-containing protein 1.|CH12 Oth@ Zmiz1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188812 ZC3H11A_(NB100-74650)|NB100-74650|ZC3H11A is a C3H1-type zinc finger protein. ZC3H11A has been identified as a protein that is phosphorylated upon DNA damage by ATM or ATR. The function of ZC3H11A remains uncharacterized.|Rabbit polyclonal antibody. The immunogen recognized by this antibody maps to a region between residue 250 and 300 of human zinc finger CCCH-type containing 11A.|CH12 Oth@ Zc3h11a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188811 Nrf2|sc-22810|epitope corresponding to amino acids 1-180 mapping at the N-terminus of GABP-alpha of human origin|Rabbit polyclonal IgG. Antibody Target: Nrf2|MEL Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188810 MAZ_(ab85725)|ab85725|May function as a transcription factor with dual roles in transcription initiation and termination. Binds to two sites, ME1a1 and ME1a2, within the MYC promoter having greater affinity for the former. Also binds to multiple G/C-rich sites within the promoter of the Sp1 family of transcription factors.|Rabbit polyclonal, immunogen is synthetic peptide, corresponding to a region within amino acids 427-477 of Human MAZ, GenBank BAA33064.1. Antibody Target: MAZ|MEL Oth@ Maz 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188809 COREST_(sc-30189)|sc-30189|Essential component of the BHC complex, a corepressor complex that represses transcription of neuron-specific genes in non-neuronal cells. In the BHC complex, it serves as a molecular beacon for the recruitment of molecular machinery, including MeCP2 and SUV39H1, that imposes silencing across a chromosomal interval. Plays a central role in demethylation of Lys-4 of histone H3 by promoting demethylase activity of KDM1A on core histones and nucleosomal substrates.|Rabbit polyclonal, epitope corresponding to amino acids 246-310 mapping within an internal region of CoREST of human origin recommended for detection of CoREST of mouse, rat and human origin. Antibody Target: COREST (sc30189)|MEL Oth@ Rcor1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188808 UBF_(sc-13125)|sc-13125|Upstream binding factor (UBF) is a transcription factor required for expression of the 18S, 5.8S, and 28S ribosomal RNAs, along with SL1 (a complex of TBP (MIM 600075) and multiple TBP-associated factors or 'TAFs'). Two UBF polypeptides, of 94 and 97 kD, exist in the human (Bell et al., 1988 (PubMed 3413483)). UBF is a nucleolar phosphoprotein with both DNA binding and transactivation domains. Sequence-specific DNA binding to the core and upstream control elements of the human rRNA promoter is mediated through several HMG boxes|UBF (F-9) is a mouse monoclonal antibody raised against amino acids 1-220 of UBF of human origin. Antibody Target: UBF|MEL Oth@ Ubtf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188806 COREST_(sc-30189)|sc-30189|Essential component of the BHC complex, a corepressor complex that represses transcription of neuron-specific genes in non-neuronal cells. In the BHC complex, it serves as a molecular beacon for the recruitment of molecular machinery, including MeCP2 and SUV39H1, that imposes silencing across a chromosomal interval. Plays a central role in demethylation of Lys-4 of histone H3 by promoting demethylase activity of KDM1A on core histones and nucleosomal substrates.|Rabbit polyclonal, epitope corresponding to amino acids 246-310 mapping within an internal region of CoREST of human origin recommended for detection of CoREST of mouse, rat and human origin. Antibody Target: COREST (sc30189)|CH12 Oth@ Rcor1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188803 UBF_(sc-13125)|sc-13125|Upstream binding factor (UBF) is a transcription factor required for expression of the 18S, 5.8S, and 28S ribosomal RNAs, along with SL1 (a complex of TBP (MIM 600075) and multiple TBP-associated factors or 'TAFs'). Two UBF polypeptides, of 94 and 97 kD, exist in the human (Bell et al., 1988 (PubMed 3413483)). UBF is a nucleolar phosphoprotein with both DNA binding and transactivation domains. Sequence-specific DNA binding to the core and upstream control elements of the human rRNA promoter is mediated through several HMG boxes|UBF (F-9) is a mouse monoclonal antibody raised against amino acids 1-220 of UBF of human origin. Antibody Target: UBF|CH12 Oth@ Ubtf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188802 ZKSCAN1_(HPA006672)|HPA006672|The ZKSCAN1 gene encodes a transcriptional regulator of the KRAB (Kruppel-associated box) subfamily of zinc finger proteins, which contain repeated Cys2-His2 (C2H2) zinc finger domains that are connected by conserved sequences, called H/C links. Transcriptional regulatory proteins containing tandemly repeated zinc finger domains are thought to be involved in both normal and abnormal cellular proliferation and differentiation.|Rabbit polyclonal, Immunogen: Zinc finger with KRAB and SCAN domain-containing protein 1 recombinant protein epitope signature tag (PrEST). Antibody Target: ZKSCAN1|CH12 Oth@ Zkscan1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188801 SIN3A_(NB600-1263)|NB600-1263|Mammalian Sin 3 (mSin 3) is closely related to the yeast SIN3 repressor protein involved in the transcriptional repression of many genes. Containing 4 paired amphipathic helix domains (PAH domains), mSin 3A and mSin 3B have been shown to directly interact with several other transcriptional repressor proteins including HDAC 1, HDAC 2, RbAp 46, the methyl CpG binding protein MeCP 2, the Mad/Max heterodimer, and the corepressors silencing mediator of retinoic acid & thyroid hormone receptor (SMRT) and nuclear receptor corepressor (N-CoR).|Rabbit polyclonal, Immunogen: Synthetic peptide: MKRRLDDQESDVYAAQQRR, corresponding to amino acids 1-19 of Mouse mSin3A. Antibody Target: SIN3A (NB600-1263)|CH12 Oth@ Sin3a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188800 SIN3A_(NB600-1263)|NB600-1263|Mammalian Sin 3 (mSin 3) is closely related to the yeast SIN3 repressor protein involved in the transcriptional repression of many genes. Containing 4 paired amphipathic helix domains (PAH domains), mSin 3A and mSin 3B have been shown to directly interact with several other transcriptional repressor proteins including HDAC 1, HDAC 2, RbAp 46, the methyl CpG binding protein MeCP 2, the Mad/Max heterodimer, and the corepressors silencing mediator of retinoic acid & thyroid hormone receptor (SMRT) and nuclear receptor corepressor (N-CoR).|Rabbit polyclonal, Immunogen: Synthetic peptide: MKRRLDDQESDVYAAQQRR, corresponding to amino acids 1-19 of Mouse mSin3A. Antibody Target: SIN3A (NB600-1263)|MEL Oth@ Sin3a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188799 ZKSCAN1_(HPA006672)|HPA006672|The ZKSCAN1 gene encodes a transcriptional regulator of the KRAB (Kruppel-associated box) subfamily of zinc finger proteins, which contain repeated Cys2-His2 (C2H2) zinc finger domains that are connected by conserved sequences, called H/C links. Transcriptional regulatory proteins containing tandemly repeated zinc finger domains are thought to be involved in both normal and abnormal cellular proliferation and differentiation.|Rabbit polyclonal, Immunogen: Zinc finger with KRAB and SCAN domain-containing protein 1 recombinant protein epitope signature tag (PrEST). Antibody Target: ZKSCAN1|MEL Oth@ Zkscan1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188798 HCFC1_(NB100-68209)|NB100-68209|The epitope recognized by this antibody maps to a region between residue 1700 and 1750 of human host cell factor C1 (VP16-accessory protein).|Rabbit polyclonalantibody against residue 1700 and 1750 of human host cell factor C1|MEL Oth@ Hcfc1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188797 ETS1|sc-350|ETS transcriptions factors, such as ETS1, regulate numerous genes and are involved in stem cell development, cell senescence and death, and tumorigenesis|Rabbit polyclonal IgG. Antibody Target: ETS1|MEL Oth@ Ets1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188796 ZC3H11A_(NB100-74650)|NB100-74650|ZC3H11A is a C3H1-type zinc finger protein. ZC3H11A has been identified as a protein that is phosphorylated upon DNA damage by ATM or ATR. The function of ZC3H11A remains uncharacterized.|Rabbit polyclonal antibody. The immunogen recognized by this antibody maps to a region between residue 250 and 300 of human zinc finger CCCH-type containing 11A.|MEL Oth@ Zc3h11a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188794 ETS1|sc-350|ETS transcriptions factors, such as ETS1, regulate numerous genes and are involved in stem cell development, cell senescence and death, and tumorigenesis|Rabbit polyclonal IgG. Antibody Target: ETS1|CH12 Oth@ Ets1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188662 Th2 polarized cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188611 none|islet InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX188610 Nkx-6.1|islet Oth@ Nkx6-1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187621 H3K9me3 (Abcam ab8898)|Embryonic stem cells His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187620 H3K9ac (Abcam, ab4441)|Embryonic stem cells His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187619 H3K27ac (Abcam, ab4729)|Embryonic stem cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187262 STAT3|Th0 in vitro Oth@ Stat3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187258 RORg|Th0 in vitro Oth@ Rorc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187245 Jmjd6|Th17 in vitro Oth@ Jmjd6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187244 Jmjd3|Th17 in vitro Oth@ Kdm6b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187213 Fosl2|Th0 in vitro Oth@ Fosl2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187203 c-Maf|Th0 in vitro Oth@ Maf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX187198 BATF|Th17 in vitro Oth@ Batf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186795 H3K4me3|ab8580; 07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|ES-E14 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186790 H3K9me3|ab8898|Histone H3 (tri methyl K9). Is associated with repressive heterochromatic state (silenced chromatin). NOTE CONTRAST to H3K9me1 which is associated with active and accessible regions.|rabbit polyclonal, ChIP grade. Antibody Target: H3K9me3|ES-E14 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186788 H3K36me3B|9763S|Histone H3 (tri-methyl K36) marks actively transcribed chromatin regions|rabbit polyclonal. Antibody Target: H3K36me3|MEL His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186784 H3K27me3B|9733S|Histone H3 (tri-methyl K27) marks repressed chromatin regions|rabbit monoclonal. Antibody Target: H3K27me3|MEL His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186552 none|Embryonic stem cells, Kdm2b shRNA, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186551 KDM2B|Embryonic stem cells, Kdm2b shRNA, Kdm2b ChIP Oth@ Kdm2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186550 RING1B|Embryonic stem cells, Kdm2b shRNA, Ring1b ChIP Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186549 none|Embryonic stem cells, control shRNA, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186548 KDM2B|Embryonic stem cells, control shRNA, Kdm2b ChIP Oth@ Kdm2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186547 RING1B|Embryonic stem cells, control shRNA, Ring1b ChIP Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186546 none|Embryonic stem cells, WT, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186545 KDM2B|Embryonic stem cells, WT, Kdm2b ChIP Oth@ Kdm2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186544 KDM2A|Embryonic stem cells, WT, Kdm2a ChIP Oth@ Kdm2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX186172 YY1|YY1|Rag1 -/- pro-B cells Oth@ Yy1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185877 H3K79me2|39143|H3K79me2 is a mark of the transcriptional transition region - the region between the initiation marks (K4me3, etc) and the elongation marks (K36me3).|Rabbit polyclonal antibody raised against a peptide containing K79 di-methylation. Antibody Target: H3K79me2|MEL His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185876 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|MEL His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185875 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|MEL His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185874 H3K9ac|ab4441|Histone H3 (acetyl K9). As with H3K27ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K9ac|Liver His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185873 H3K79me2|39143|H3K79me2 is a mark of the transcriptional transition region - the region between the initiation marks (K4me3, etc) and the elongation marks (K36me3).|Rabbit polyclonal antibody raised against a peptide containing K79 di-methylation. Antibody Target: H3K79me2|Liver His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185872 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|Liver His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185871 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Liver His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185870 H3K9ac|ab4441|Histone H3 (acetyl K9). As with H3K27ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K9ac|Heart His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185869 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|B-cell_(CD43-) His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185868 H3K9me3|ab8898|Histone H3 (tri methyl K9). Is associated with repressive heterochromatic state (silenced chromatin). NOTE CONTRAST to H3K9me1 which is associated with active and accessible regions.|rabbit polyclonal, ChIP grade. Antibody Target: H3K9me3|ES-Bruce4 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185867 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Spleen His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185866 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Testis His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185865 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Thymus His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185864 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|WholeBrain His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185863 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|MEL His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185862 H3K9ac|ab4441|Histone H3 (acetyl K9). As with H3K27ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K9ac|MEL His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185860 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|MEF His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185859 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Spleen His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185857 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|Heart His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185856 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|Heart His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185855 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Placenta His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185854 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|Placenta His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185853 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|Placenta His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185852 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Heart His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185851 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|Heart His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185850 H3K79me2|39143|H3K79me2 is a mark of the transcriptional transition region - the region between the initiation marks (K4me3, etc) and the elongation marks (K36me3).|Rabbit polyclonal antibody raised against a peptide containing K79 di-methylation. Antibody Target: H3K79me2|Heart His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185849 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|OlfactBulb His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185848 H3K9ac|ab4441|Histone H3 (acetyl K9). As with H3K27ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K9ac|ES-Bruce4 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185847 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|ES-E14 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185846 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|ES-E14 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185845 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|ES-E14 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185844 H3K9ac|ab4441|Histone H3 (acetyl K9). As with H3K27ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K9ac|ES-E14 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185843 H3K79me2|39143|H3K79me2 is a mark of the transcriptional transition region - the region between the initiation marks (K4me3, etc) and the elongation marks (K36me3).|Rabbit polyclonal antibody raised against a peptide containing K79 di-methylation. Antibody Target: H3K79me2|CH12 His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185841 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|B-cell_(CD43-) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185838 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|CH12 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185837 H3K4me2|ab7766|Histone H3 (di methyl K4). Marks promoters and enhancers. Most CpG islands are marked by H3K4me2 in primary cells. May be associated also with poised promoters.|rabbit polyclonal. Antibody Target: H3K4me2|CH12 His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185836 H3K9ac|ab4441|Histone H3 (acetyl K9). As with H3K27ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K9ac|CH12 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185835 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|CH12 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185832 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|Liver His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185831 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|Liver His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185830 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|ES-Bruce4 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185829 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|BoneMarrow His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185828 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Limb His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185827 H3K9me3|ab8898|Histone H3 (tri methyl K9). Is associated with repressive heterochromatic state (silenced chromatin). NOTE CONTRAST to H3K9me1 which is associated with active and accessible regions.|rabbit polyclonal, ChIP grade. Antibody Target: H3K9me3|WholeBrain His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185826 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|OlfactBulb His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185825 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|OlfactBulb His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185824 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Thymus His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185823 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|Thymus His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185822 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|Thymus His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185821 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Cortex His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185820 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|ES-Bruce4 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185818 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Cerebellum His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185817 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|WholeBrain His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185816 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|WholeBrain His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185815 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|WholeBrain His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185813 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Kidney His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185812 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|CH12 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185811 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Cerebellum His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185810 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|ES-Bruce4 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185809 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|B-cell_(CD43-) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185808 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|MEL His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185807 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|Limb His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185806 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|Limb His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185805 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|SmIntestine His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185804 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|SmIntestine His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185803 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|SmIntestine His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185802 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|Testis His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185800 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|Testis His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185799 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|Testis His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185798 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Kidney His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185797 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|BAT His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185796 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|BAT His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185795 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|BMDM His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185793 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|WholeBrain His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185792 H3K27ac|ab4729|Histone H3 (acetyl K27). As with H3K9ac, associated with transcriptional initiation and open chromatin structure. It remains unknown whether acetylation has can have different consequences depending on the specific lysine residue targeted. In general, though, there appears to be high redundancy. Histone acetylation is notable for susceptibility to small molecules and drugs that target histone deacetylases.|rabbit polyclonal. Antibody Target: H3K27ac|BAT His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185791 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|Spleen His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185790 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|SmIntestine His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185789 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|Thymus His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185788 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|Testis His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185787 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|BMDM His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185786 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|BMDM His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185785 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|SmIntestine His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185784 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|Kidney His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185782 none|Input Genomic DNA|mK4 Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185781 none|Input Genomic DNA|mK3 Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185780 H3K27|mK4 Cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185779 H3K27|mK3 Cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185778 H3K4|mK4 Cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185777 H3K4|mK3 Cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185717 Bone marrow derived dendritic cells stimulated with LPS Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185716 Th0 polarized cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185715 Th17 polarized cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185714 IRF-4 Antibody (M-17)|Bone marrow derived dendritic cells stimulated with LPS Oth@ Irf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185713 IRF-4 Antibody (M-17)|Th0 polarized cells Oth@ Irf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185712 IRF-4 Antibody (M-17)|Th2 polarized cells Oth@ Irf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185711 BATF|Th17 polarized cells Oth@ Batf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185710 IRF-4 Antibody (M-17)|Th17 polarized cells Oth@ Irf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185707 none (input control)|bone marrow progenitors InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185706 anti-OGT1 Sigma, catalog# 06264|bone marrow progenitors Oth@ Ogt 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185705 anti-HCF1 Bethyl Laboratories, catalog# A301-399A|bone marrow progenitors Oth@ Hcfc1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX185704 anti-FLAG Sigma, catalog# A2220|bone marrow progenitors Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184870 CD4 Cbfb ChIP Oth@ Cbfb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184869 Treg Cbfb ChIP Oth@ Cbfb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184868 CD4 Ets1 ChIP Oth@ Ets1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184867 Treg Ets1 ChIP Oth@ Ets1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184866 CD4 Elf1 ChIP Oth@ Elf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184865 Treg Elf1 ChIP Oth@ Elf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184330 T-bet (Lab produced (Szabo et al., Nature 2000))|Tbet -/- Th1 cells Oth@ Tbx21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184329 T-bet (Lab produced (Szabo et al., Nature 2000))|Th1 cells Oth@ Tbx21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX184328 None|T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX183975 primary CD4+ T cells from spleen and lymph nodes Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX183954 anti-STAT1|primary CD4+ T cells from spleen and lymph nodes Oth@ Stat1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX183894 GATA2|Mouse uterus Oth@ Gata2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX183790 none|nTreg cells, Foxo1tagBirA mice InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX183789 none|nTreg cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX183788 Strepdavidin|nTreg cells, Foxo1tagBirA mice Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX183787 Foxo1 antibody (Abcam, Ab39670, lot#GR16346-7)|nTreg cells Oth@ Foxo1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX181866 none|32D granuolocytic progenitor cells (bone marrow) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX181863 Lsd1|32D granuolocytic progenitor cells (bone marrow) Oth@ Kdm1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX181747 TAL1_(SC-12984)|sc-12984|TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.|goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1|Megakaryo Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX181746 FLI1_(sc-356)|sc-356|Fli1 (Friend leukemia virus integration 1) is a member of a family of genes identified on the basis of their homology to the v-Ets oncogene isolated from the E26 erythoblastosis virus.|FLI1 (C-19) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the C-terminus of FLI1 of mouse origin.|Megakaryo Oth@ Fli1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX181025 Foxa2|Definitive endoderm cells Oth@ Foxa2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX180900 anti-SRF|Santa Cruz Biotechnology/sc-335|10T1/2 cells knockdown Med23 Oth@ Srf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX180899 anti-SRF|Santa Cruz Biotechnology/sc-335|10T1/2 cells knockdown control Oth@ Srf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX180166 SC|differentiating murine hematopoietic cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX180165 FLI1|differentiating murine hematopoietic cells Oth@ Fli1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX180164 RNA Pol II|differentiating murine hematopoietic cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX180159 CEBPb|differentiating murine hematopoietic cells Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX180154 none|differentiating murine hematopoietic cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX179489 none|CD4+ T cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX179488 anti-Pol II (N20)|sc-899|CD4+ T cells, FLAG-FoxP3+GATA1, Pol II ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX179487 anti-FLAG, clone M2|F1804|CD4+ T cells, FLAG-FoxP3, FLAG ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX179486 anti-FLAG, clone M2|F1804|CD4+ T cells, FLAG-FoxP3+GATA1, FLAG ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178466 None|multipotent progenitor InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178465 c-Myc (sc764x, Santa Cruz), lot# H0107|progenitor B Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178464 H3K27me3 (07-449, Millipore), lot# DAM1588246|progenitor B His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178463 p300 (sc-585x, Santa Cruz), lot# H2610|progenitor B Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178462 H3K36me3 (ab9050, Abcam), lot# 947467|progenitor B His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178461 Rad21 (ab992, Abcam), lot# GR12688-4|progenitor B Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178460 CTCF (07-729, Millipore), lot# DAM1772428|progenitor B Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178459 H3K4me2 (07-030, Millipore), lot# DAM1570816|progenitor B His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178458 H3K36me3 (ab9050, Abcam), lot# 947467|multipotent progenitor His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178457 Rad21 (ab992, Abcam), lot# GR12688-4|multipotent progenitor Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178456 CTCF (07-729, Millipore), lot# DAM1772428|multipotent progenitor Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX178455 H3K4me2 (07-030, Millipore), lot# DAM1570816|multipotent progenitor His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX176650 H3K27me1|Cell Signaling/No 07-448/Lot 24439|E14 ES cells His@ H3K27me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX176649 H3K27me2|Cell Signaling/No 9728S/Lot 1|E14 ES cells His@ H3K27me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX176648 H3|Abcam/No 1791/GR50122-1|E14 ES cells His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX175895 H3K27me3 (Millipore:07-449)|ES cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX174828 Pol2-S5P (Abcam, ab5131)|Day2+8hrs post-RA exposure Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX174586 NFATc1|NFATc1-ChIP-Seq-shSTAT3 Oth@ Nfatc1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX174585 NFATc1|NFATc1-ChIP-Seq-scramble Oth@ Nfatc1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172951 IgG antibodies (Santa Cruz, sc-2025)|ctrl.2, 2i InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172950 Tfe3 (Santa Cruz, sc-5958)|Tfe3.3, 2i Oth@ Tfe3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172949 Tfe3 (Santa Cruz, sc-5958)|Flcn.4, 2i Oth@ Tfe3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172948 Tfe3 (Santa Cruz, sc-5958)|ctrl.2, 2i Oth@ Tfe3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172569 H3K4me3|Cell Signaling, 9751|Embryonic Stem Cell His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172566 none|Embryonic Stem Cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172348 STAT3 (Invitrogen, 13-7000)|Th17 Cells Oth@ Stat3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172347 JunD (Santa Cruz, sc-74, J-1411)|Th17 Cells Oth@ Jund 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172346 cJUN (Abcam, ab31419, GR30-33)|Th17 Cells Oth@ Jun 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172345 JunB (Santa Cruz, sc-73, k0311)|Th17 Cells Oth@ Junb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172344 IRF4 (Santa Cruz, sc-6059, k1209)|Th17 Cells Oth@ Irf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172343 BATF (from Ken Murphy rabbit , not commercial available)|Th17 Cells Oth@ Batf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172342 Rabbit IgG (R&D, AB-105-C, ER11)|Th17 Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172325 Rabbit IgG (R&D, AB-105-C, ER11)|CD4+ T Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX172322 Rabbit IgG (R&D, AB-105-C, ER11)|B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX170836 post mitotic neuronal cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX170716 Pbx1 (4342 CST)|E11.5 Embryo Trunk Oth@ Pbx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX170715 Prep1/2 (N15 Santa Cruz)|E11.5 Embryo Trunk Oth@ Pknox1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX170714 Meis1/2 (K830, K844)|E11.5 Embryo Trunk Oth@ Meis1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160831 IgG (Santa Cruz Biotechnology, Sc-2027)|Differentiated mouse ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160830 CTCF (Millipore, 07-729, lot DAM1682158)|Differentiated mouse ES cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160829 IgG (Santa Cruz Biotechnology, Sc-2027)|Undifferentiated mouse ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160828 CTCF (Millipore, 07-729, lot DAM1682158)|Undifferentiated mouse ES cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160815 H3K27ac|E36 ES cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160814 H3K27ac (Abcam, cat No:4729, Lot: GR55451-1)|E36 ES cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160504 anti-Flag (Sigma, F1804-200UG)|embryonic stem cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160503 anti-V5 (Abcam, ab15828)|embryonic stem cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160502 anti-Pol2 antibody 8WG16 (Covance MMS-126R)|progenitor motor neurons Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160501 anti-H3K79me2 antibody (Abcam ab3594)|progenitor motor neurons His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160500 anti-H3K4me3 antibody (Abcam ab8580)|progenitor motor neurons His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160499 anti-H3K27me3 (Abcam, ab6002)|progenitor motor neurons His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160496 anti-H3K27me3 (Abcam, ab6002)|Day 5 cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160415 TBP (Abcam ab818)|F1 C/B trophoblast stem cells Oth@ Tbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160414 SP1 (Santa Cruz sc-17824)|F1 C/B trophoblast stem cells Oth@ Sp1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160413 H3K4me1 (Abcam ab8895)|F1 C/B trophoblast stem cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160412 H3K27ac (Abcam 4729)|F1 C/B trophoblast stem cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160409 H3K27me3, B/C (Abcam ab6002)|F1 B/C trophoblast stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160408 H3K27me3, C/B #2 (Abcam ab6002)|F1 C/B trophoblast stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160407 H3K27me3 (Abcam ab6002)|F1 C/B trophoblast stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160406 H4K20me1 (Active Motif 39175)|F1 C/B trophoblast stem cells His@ H4K20me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160405 Total H3 (Abcam ab1791)|F1 C/B trophoblast stem cells His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160404 H3K36me3 (Abcam ab9050)|F1 C/B trophoblast stem cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160403 H3K4me2 (Millipore 07-030)|F1 C/B trophoblast stem cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX160402 Pol II (Santa Cruz sc-899)|F1 C/B trophoblast stem cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX159136 ZNF143, rabbit polyclonal raised against a C-terminal epitope of ZNF143 (Myslinski et al JBC 2006)|Mouse Embryonic Stem cells Oth@ Zfp143 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX159087 Acetyl-H2A.Z (Abcam ab18262)|acH2AZ_mNP_ChIPSeq His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX159086 H2A.Z (Millipore 07-594)|H2AZ_mNP_ChIPSeq His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX159085 RNAPII (CTD4H8) (Covance MMS-128P)|RNAPII_mES_ChIPSeq Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX159084 TFIID(TBP) (Santa Cruz sc-273X)|TFIID_mES_ChIPSeq Oth@ Tbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX159083 Acetyl-H2A.Z (Abcam ab18262)|acH2AZ_mES_ChIPSeq His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX159082 H2A.Z (Millipore 07-594)|H2AZ_mES_ChIPSeq His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX157968 Anti-IgG (IgG from rabbit serum, Sigma-Aldrich, catalog# I5006)|E14 ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX157967 Anti-OGT (O-Linked N-Acetylglucosamine Transferase antibody sold, Abcam, catalog# ab50273)|E14 ES cells Oth@ Ogt 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155383 goat anti-IRF8 antibody (C-19; Santa Cruz Biotechnology)|Tot2 cells, MSCV-IRF8 transuced, Day3 Oth@ Irf8 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155382 rabbit anti-H3K4me1 antibody (Ab8895, Abcam)|Tot2 cells, MSCV-IRF8 transuced, Day3 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155381 none|Tot2 cells, MSCV-IRF8 transuced, Day3 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155380 rabbit anti-H3K4me1 antibody (Ab8895, Abcam)|Tot2 cells, MSCV transuced, Day3 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155379 none|Tot2 cells, MSCV transuced, Day3 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155111 anti-T-bet antibody (sc-21749, Santa Cruz)|Th1 Oth@ Tbx21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155020 Clontech, 632460|Quiescent B cells, lipopolysaccharide (LPS) and 10058-F4 treatments for 4hrs Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155016 Abcam, ab5408|Quiescent B cells, lipopolysaccharide (LPS) and 10058-F4 treatments for 4hrs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155014 Abcam, ab5408|Quiescent B cells, lipopolysaccharide (LPS) treatment for 4hrs Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155013 Santa Cruz SC-2025|Quiescent B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX155012 Clontech, 632460|Quiescent B cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX153189 H3K9me3|ab8898|Histone H3 (tri methyl K9). Is associated with repressive heterochromatic state (silenced chromatin). NOTE CONTRAST to H3K9me1 which is associated with active and accessible regions.|rabbit polyclonal, ChIP grade. Antibody Target: H3K9me3|Erythrobl His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX153188 H3K9me3|ab8898|Histone H3 (tri methyl K9). Is associated with repressive heterochromatic state (silenced chromatin). NOTE CONTRAST to H3K9me1 which is associated with active and accessible regions.|rabbit polyclonal, ChIP grade. Antibody Target: H3K9me3|CH12 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX153187 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Erythrobl His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX153166 H3K36me3|ab9050|Histone H3 (tri-methyl K36). Marks regions of RNAPII elongation, including coding and non-coding transcripts.|rabbit polyclonal. Antibody Target: H3K36me3|G1E-ER4 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX153165 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal. Antibody Target: H3K4me1|Megakaryo His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX153164 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal. Antibody Target: H3K4me3|Erythrobl His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX153163 H3K27me3|07-449|Histone H3 (tri-methyl K27). Marks promoters that are silenced by Polycomb proteins in a given lineage; large domains are found at inactive developmental loci.|rabbit polyclonal. Antibody Target: H3K27me3|Megakaryo His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX150884 Anti-polII (Santa Cruz # sc-899)|Primary bone marrow-derived macrophages (BMDM) Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX150789 pan-RXR|sc-774x lot #F1609|C17.2a neural progenitor cells, RXR ChIP Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX150788 C17.2b neural progenitor cells, TRb ChAP Oth@ Thrb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX150787 C17.2a neural progenitor cells, TRa ChAP Oth@ Thra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX150265 ChIP_MNase_din_cereb_INPUT InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX150264 ChIP_MNase_din_cereb_MECP2 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX150263 ChIP_MNase_monon_cereb_INPUT InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX149641 RNA Pol II (8WG16)|Covance MMS-126R|Embryonic stem cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX149640 SA2|Bethyl A300-158A-1|Embryonic stem cells Oth@ Stag2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX149639 SA1|Bethyl A300-157A-1|Embryonic stem cells Oth@ Stag1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX149638 Brd4|Bethyl A301-985A|Embryonic stem cells Oth@ Brd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX149207 None|Input data from HA-Ikaros transduced B3 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX149001 A fragment of human ELL3 (aa 1-248) was expressed as His-tag fusion protein in pET-16b, purified on NTA-agarose according to Qiagens protocol and sent to Pocono Rabbit Farm and Labs for immunization into rabbits.|murine embryonic stem cells Oth@ Ell3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX148806 H3K4me1 (Abcam ab8895)|Pro-B His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX148357 STHdhQ111/Q111 striatal cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX148356 STHdhQ7/Q7 striatal cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX147771 FLAG (Sigma, A2220) and HA (Sigma, A2095)|embryonic stem cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146883 anti-Isl1/2 (gift from Dr. T. Jessell)|Isl1 induced cells (Day4 iI differentiation) Oth@ Isl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146882 anti-Isl1/2 (gift from Dr. T. Jessell)|induced cortical motor neurons (Day4 iNIP differentiation) Oth@ Isl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146881 anti-V5 (Abcam, ab15828)|induced cortical motor neurons (Day4 iNIP differentiation) Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146548 none|Mouse V19-OSKM Aberrant iPS cells, Utx-/Y, Clone #2 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146547 H3K27me3; ChIP grade, 07-449, Millipore|Mouse V19-OSKM Aberrant iPS cells, Utx-/Y, Clone #2 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146546 H3K4me3; ChIP grade, ab8580, abcam|Mouse V19-OSKM Aberrant iPS cells, Utx-/Y, Clone #2 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146545 none|Mouse V19-OSKM Aberrant iPS cells, Utx-/Y, Clone #1 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146544 H3K27me3; ChIP grade, 07-449, Millipore|Mouse V19-OSKM Aberrant iPS cells, Utx-/Y, Clone #1 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146543 H3K4me3; ChIP grade, ab8580, abcam|Mouse V19-OSKM Aberrant iPS cells, Utx-/Y, Clone #1 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146542 none|Mouse V6.5 ESCs, Utx-/Y InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146541 H3K4me3; ChIP grade, ab8580, abcam|Mouse V6.5 ESCs, Utx-/Y His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146540 H3K27me3; ChIP grade, 07-449, Millipore|Mouse V6.5 ESCs, Utx-/Y His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146539 none|Mouse V6.5 ESCs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146538 UTX Ab-UTX 5/1, PID 17178841|Mouse V6.5 ESCs Oth@ Kdm6a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146537 H3K4me3; ChIP grade, ab8580, abcam|Mouse V6.5 ESCs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX146536 H3K27me3; ChIP grade, 07-449, Millipore|Mouse V6.5 ESCs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145999 none|lateral telencephalon InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145801 GR (sc-1004) from SantaCruz|AtT-20 corticotroph cells treated with GR (Dex) Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145800 GR (sc-1004) from SantaCruz|AtT-20 corticotroph cells treated with GR (Dex+LIF) Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145799 p-STAT3 (sc-7993) and STAT3 (sc-482x) from SantaCruz|AtT-20 corticotroph cells treated with Stat3 (Dex+LIF) Oth@ Stat3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145798 p-STAT3 (sc-7993) and STAT3 (sc-482x) from SantaCruz|AtT-20 corticotroph cells treated with Stat3 (LIF) Oth@ Stat3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145797 rabbit IgG (G2018, Sigma)|AtT-20 corticotroph cells treated with Control IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145070 Pol2-4H8|ab5408|This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes|Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL24H8|G1E-ER4 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145069 Pol2-4H8|ab5408|This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes|Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL24H8|G1E Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145068 GATA2_(SC-9008)|sc-9008|The GATA family of transcription factors share a conserved zinc finger DNA-binding domain and are capable of binding the WGATAR consensus sequence. GATA1 is erythroid-specific and is essential for normal erythropeisis. By comparison, GATA2 is expressed at high levels in hematopoeitic progenitors, including early erythroid cells, but is strong repressed during erythroblast differentiaion.|Rabbit polyclonal antibody raised against amino acids 120-235 of GATA-2 of human origin. Antibody Target: GATA2|G1E-ER4 Oth@ Gata2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145067 GATA2_(SC-9008)|sc-9008|The GATA family of transcription factors share a conserved zinc finger DNA-binding domain and are capable of binding the WGATAR consensus sequence. GATA1 is erythroid-specific and is essential for normal erythropeisis. By comparison, GATA2 is expressed at high levels in hematopoeitic progenitors, including early erythroid cells, but is strong repressed during erythroblast differentiaion.|Rabbit polyclonal antibody raised against amino acids 120-235 of GATA-2 of human origin. Antibody Target: GATA2|G1E Oth@ Gata2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145066 GATA1_(SC-265)|sc-265|GATA1 is erythroid-specific and is responsible for the regulated transcription of erythroid genes.|rat monoclonal antibody raised against mouse recombinant GATA1; recommended for detection of GATA1 of mouse, rat and human origin. Antibody Target: GATA1|Megakaryo Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145065 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Erythrobl InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145064 PAX5_(N-15)|ab12000|The PAX5 gene is a member of the paired box (PAX) family of transcription factors. The central feature of this gene family is a novel, highly conserved DNA binding motif, known as the paired box. The PAX proteins are important regulators in early development, and alterations in the expression of their genes are thought to contribute to neoplastic transformation. The PAX5 gene encodes the B cell lineage specific activator protein (BSAP) that is expressed at early, but not late stages of B cell differentiation.|rabbit polyclonal antibody; epitope is a synthetic peptide: MDLEKNYPTPRTSRT, corresponding to amino acids 1-15 of Human PAX5, cross-reacts with human and mouse PAX5. Antibody Target: PAX5|CH12 Oth@ Pax5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145063 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|Megakaryo InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145062 TAL1_(SC-12984)|sc-12984|TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.|goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1|Erythrobl Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145061 GATA1_(SC-265)|sc-265|GATA1 is erythroid-specific and is responsible for the regulated transcription of erythroid genes.|rat monoclonal antibody raised against mouse recombinant GATA1; recommended for detection of GATA1 of mouse, rat and human origin. Antibody Target: GATA1|G1E Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145060 Input|Control signal which may be subtracted from experimental raw signal before peaks are called.|G1E InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145059 TAL1_(SC-12984)|sc-12984|TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.|goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1|G1E Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145058 TAL1_(SC-12984)|sc-12984|TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.|goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1|MEL Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145057 Pol2-4H8|ab5408|This gene encodes the largest subunit of RNA polymerase II, the polymerase responsible for synthesizing messenger RNA in eukaryotes|Mouse monoclonal to RNA polymerase II CTD repeat YSPTSPS antibody (4H8) - ChIP Grade. Antibody Target: POL24H8|MEL Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145056 TAL1_(SC-12984)|sc-12984|TAL1 (also designated SCL) is a serine phosphoprotein and basic helix-loop-helix transcription factor known to regulate embryonic hematopoiesis.|goat polyclonal antibody; epitope mapping at the C-terminus of TAL1 of human origin, recommended for detection of TAL1 of mouse, rat and human origin. Antibody Target: TAL1|G1E-ER4 Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145055 GATA1_(SC-265)|sc-265|GATA1 is erythroid-specific and is responsible for the regulated transcription of erythroid genes.|rat monoclonal antibody raised against mouse recombinant GATA1; recommended for detection of GATA1 of mouse, rat and human origin. Antibody Target: GATA1|Erythrobl Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145051 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|G1E-ER4 Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145050 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|G1E Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX145048 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|CH12 Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143853 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|MEF Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143852 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|BoneMarrow Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143851 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Cerebellum Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143850 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Kidney Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143849 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|BoneMarrow Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143848 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Heart Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143842 p300|sc-585|EP300(c-20)|Rabbit Polyclonal. Antibody Target: P300|ES-Bruce4 Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143841 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|ES-Bruce4 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143840 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|ES-Bruce4 Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143839 p300|sc-585|EP300(c-20)|Rabbit Polyclonal. Antibody Target: P300|Heart Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143838 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Spleen Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143837 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Spleen Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143835 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|MEF Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143834 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Thymus Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143833 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Limb Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143830 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Liver Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143828 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|OlfactBulb Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143827 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|OlfactBulb Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143826 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Thymus Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143823 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Kidney Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143822 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|WholeBrain Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143820 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Cortex Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143819 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Cortex Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143818 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|BMDM Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143817 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Cerebellum Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143816 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Lung Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143815 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Heart Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143814 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Lung Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143812 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|BMDM Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143807 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Liver Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143803 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|Testis Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143802 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|SmIntestine Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143801 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|SmIntestine Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143800 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Limb Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143798 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|WholeBrain Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143796 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|Testis Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143614 H3K4me2_(ab32356)|ab32356|Histone H3 (di methyl K4). Marks promoters and enhancers.|Rabbit polyclonal. Antibody Target: H3K4me2|C2C12 His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX143611 H3K79me3_(ab2621)|ab2621|Associated with the gene body of actively transcribed genes|Rabbit polyclonal. Antibody Target: H3K79me3|C2C12 His@ H3K79me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142912 none|trophoblast stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142911 Purified IgG1 k isotype control (BD Biosciences, Cat. No. 554121, Lot #70274)|trophoblast stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142910 TEAD4 (Abcam, Cat. No. ab58310, Lot #GR33778-1)|trophoblast stem cells Oth@ Tead4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142539 CTCF|07-729|CTCF zinc finger transcription factor. A sequence specific DNA binding protein that functions as an insulator, blocking enhancer activity. It has also been suggested to block the spreading of chromatin structure in certain instances.|rabbit polyclonal. Antibody Target: CTCF|C2C12 Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142538 E2F4|sc-866|mapping at the C-terminus of E2F4 of human origin|rabbit polyclonal. Antibody Target: E2F4|C2C12 Oth@ E2f4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142533 FOSL1_(sc-605)|sc-605|The Fos gene family consists of 4 members: FOS, FOSB, FOSL1, and FOSL2. These genes encode leucine zipper proteins that can dimerize with proteins of the JUN family, thereby forming the transcription factor complex AP-1. As such, the FOS proteins have been implicated as regulators of cell proliferation, differentiation, and transformation. (provided by RefSeq)|Rabbit polyclonal antibody raised against the N-terminus of FOSL1 of rat origin. Antibody Target: FOSL1|C2C12 Oth@ Fosl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142529 TCF12|sc-357|The protein encoded by this gene is a member of the basic helix-loop-helix (bHLH) E-protein family that recognizes the consensus binding site (E-box) CANNTG. This encoded protein is expressed in many tissues, among them skeletal muscle, thymus, B- and T-cells, and may participate in regulating lineage-specific gene expression through the formation of heterodimers with other bHLH E-proteins. Several alternatively spliced transcript variants of this gene have been described, but the full-length nature of some of these variants has not been determined.|HEB (A-20) Rabbit polyclonal IgG, 200 ?g/ml. Epitope mapping within the C-terminus of HEB of human origin. Antibody Target: TCF12|C2C12 Oth@ Tcf12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142528 TCF3_(SC-349)|sc-349|Heterodimers between TCF3 and tissue-specific basic helix-loop-helix (bHLH) proteins play major roles in determining tissue-specific cell fate during embryogenesis, like muscle or early B-cell differentiation. Dimers bind DNA on E-box motifs: 5'-CANNTG-3'. Binds to the kappa-E2 site in the kappa immunoglobulin gene enhancer.|E2A.E12(V-18) is an affinity purified rabbit polyclonal antibody raised against a peptide mapping at the C-terminus of E2A.E12 of human origin. Recommended for detection of E12 and E47 of m, r and h origin by WB, IP, IF, IHC(P), ELISA and indirect FCM using PE (sc-3739)- or FITC (sc-2012)-conjugated goat anti-rabbit IgG. Antibody Target: TCF3|C2C12 Oth@ Tcf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142527 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|C2C12 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142526 NRSF|(Made by Protein Expression Center: peccaltech.edu)|Neuron-restrictive silencer transcription factor|Mouse monoclonal. Antibody Target: NRSF|C2C12 Oth@ Rest 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142519 SRF|sc-335|Serum response transcription factor|Rabbit polyclonal. Antibody Target: SRF|C2C12 Oth@ Srf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142518 Pol2(phosphoS2)|ab5095|RNA polymerase II, large subunit- specific for phosphorylated C-terminal domain.|Rabbit polyclonal against peptide conjugated to KLH derived from within residues 1600 - 1700 of S. cerevisiae RNA polymerase II CTD repeat YSPTSPS, phosphorylated at S2. Antibody Target: POL2S2|C2C12 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142063 IgG|E14 mouse embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX142062 NcoA3|E14 mouse embryonic stem cells Oth@ Ncoa3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX141255 Santa Cruz SC-2025|Resting T cells, conconavalin A (conA) activation for 14hrs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX141254 Clontech, 632460|Resting T cells, conconavalin A (conA) activation for 14hrs Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX141253 Santa Cruz SC-2025|Resting T cells, conconavalin A (conA) activation for 4hrs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX141252 Clontech, 632460|Resting T cells, conconavalin A (conA) activation for 4hrs Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140397 c-Myc|sc-764|transcription factor; c-Myc-encoded proteins function in cell proliferation,differentiation and neoplastic disease|rabbit polyclonal to amino acids 1-262 of c-Myc human origin. Antibody Target: c-Myc|MEL Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140395 NELFe|sc-32912|NELFe (RDBP) is a part of the negative elongation factor complex which binds to RNAPII to suppress elongation.|NELFe (RDBP). Antibody Target: NELFe|MEL Oth@ Nelfe 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140394 Pol2(phosphoS2)|ab5095|RNA polymerase II, large subunit- specific for phosphorylated C-terminal domain.|Rabbit polyclonal against peptide conjugated to KLH derived from within residues 1600 - 1700 of S. cerevisiae RNA polymerase II CTD repeat YSPTSPS, phosphorylated at S2. Antibody Target: POL2S2|CH12 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140393 SMC3_(ab9263)|ab9263|Involved in chromosome cohesion during cell cycle and in DNA repair. Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication.|Rabbit polyclonal raised against synthetic peptide representing a portion within the last 100 amino acids of the human Structural Maintenance of Chromosomes-3 conjugated to KLH. Antibody Target: SMC3|CH12 Oth@ Smc3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140392 CHD2_(AB68301)|ab68301|CHD family of proteins are characterized by presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template.|Rabbit polyclonal to CHD2 Synthetic peptide derived from within residues 1250 - 1350 of Human CHD2. Antibody Target: CHD2|MEL Oth@ Chd2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140391 Mxi1_(AF4185)|AF4185|Transcriptional repressor. Binds with MAX to form recognize the core sequence 5'-CACGATG-3', antagonizes MYC transcriptional activity by competing for MAX|Goat IgG. Raised against E. coli-derived rhMxi1. Antibody Target: Mxi1|MEL Oth@ Mxi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140390 Pol2(phosphoS2)|ab5095|RNA polymerase II, large subunit- specific for phosphorylated C-terminal domain.|Rabbit polyclonal against peptide conjugated to KLH derived from within residues 1600 - 1700 of S. cerevisiae RNA polymerase II CTD repeat YSPTSPS, phosphorylated at S2. Antibody Target: POL2S2|MEL Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140389 CHD2_(AB68301)|ab68301|CHD family of proteins are characterized by presence of chromo (chromatin organization modifier) domains and SNF2-related helicase/ATPase domains. CHD genes alter gene expression possibly by modification of chromatin structure thus altering access of the transcriptional apparatus to its chromosomal DNA template.|Rabbit polyclonal to CHD2 Synthetic peptide derived from within residues 1250 - 1350 of Human CHD2. Antibody Target: CHD2|CH12 Oth@ Chd2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140388 Mxi1_(AF4185)|AF4185|Transcriptional repressor. Binds with MAX to form recognize the core sequence 5'-CACGATG-3', antagonizes MYC transcriptional activity by competing for MAX|Goat IgG. Raised against E. coli-derived rhMxi1. Antibody Target: Mxi1|CH12 Oth@ Mxi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140387 NELFe|sc-32912|NELFe (RDBP) is a part of the negative elongation factor complex which binds to RNAPII to suppress elongation.|NELFe (RDBP). Antibody Target: NELFe|CH12 Oth@ Nelfe 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140386 SMC3_(ab9263)|ab9263|Involved in chromosome cohesion during cell cycle and in DNA repair. Central component of cohesin complex. The cohesin complex is required for the cohesion of sister chromatids after DNA replication.|Rabbit polyclonal raised against synthetic peptide representing a portion within the last 100 amino acids of the human Structural Maintenance of Chromosomes-3 conjugated to KLH. Antibody Target: SMC3|MEL Oth@ Smc3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140385 BHLHE40_(NB100-1800)|NB100-1800|This gene encodes a basic helix-loop-helix protein expressed in various tissues. Expression in the chondrocytes is responsive to the addition of Bt2cAMP. The encoded protein is believed to be involved in the control of cell differentiation.|Rabbit polyclonal, maps to a region between residues 350 and the C-terminus (residue 412). Antibody Target: BHLHE40|CH12 Oth@ Bhlhe40 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140384 p300|sc-585|EP300(c-20)|Rabbit Polyclonal. Antibody Target: P300|MEL Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140383 p300_(SC-584)|sc-584|Encodes the adenovirus E1A-associated cellular p300 transcriptional co-activator protein. Functions as histone acetyltransferase and regulates transcription via chromatin remodeling. Acetylates all four core histones in nucleosomes. Mediates cAMP-gene regulation by binding specifically to phosphorylated CREB protein|Rabbit polyclonal IgG, epitope mapping at the N-terminus of p300 of human origin. Antibody Target: P300|CH12 Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140382 Max|sc-197|The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).|Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max|MEL Oth@ Max 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140378 JunD|sc-74|The protein encoded by this intronless gene is a member of the JUN family, and a functional component of the AP1 transcription factor complex. It has been proposed to protect cells from p53-dependent senescence and apoptosis. Alternate translation initiation site usage results in the production of different isoforms. (provided by RefSeq)|rabbit polyclonal IgG. Antibody Target: JunD|MEL Oth@ Jund 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140377 E2F4|sc-866|mapping at the C-terminus of E2F4 of human origin|rabbit polyclonal. Antibody Target: E2F4|MEL Oth@ E2f4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140376 TBP|ab62126|General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (preinitiation complex) during RNA polymerase I-dependent transcription.|Mouse monoclonal. Immunogen is synthetic peptide conjugated to KLH derived from within residues 1 - 100 of HumanTATA binding protein TBP. Antibody Target: TBP|MEL Oth@ Tbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140375 E2F4|sc-866|mapping at the C-terminus of E2F4 of human origin|rabbit polyclonal. Antibody Target: E2F4|CH12 Oth@ E2f4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140374 Rad21|ab992|Synthetic peptide (Human) conjugated to KLH - which represents a portion of human Rad21 encoded within exon 14|Rabbit polyclonal. Antibody Target: RAD21|CH12 Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140373 USF2|ab60931|Encodes a member of the basic helix-loop-helix leucine zipper family. The encoded protein can activate transcription through pyrimidine-rich initiator (Inr) elements and E-box motifs (5'-CACGTG-3').|Mouse monoclonal. Immunogen corresponds to amino acids 1-101 of Human USF2. Antibody Target: USF2|CH12 Oth@ Usf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140372 CTCF_(SC-15914)|sc-15914|Transcriptional regulator with 11 highly conserved zinc finger domains. Depending on context, can bind a histone acetyltransferase (HAT)-containing complex and function as transcriptional activator or bind a histone deacetylase (HDAC)-containing complex and function as transcriptional repressor. Involved in transcriptional regulation by binding to chromatin insulators and preventing interaction between promoter and nearby enhancers and silencers. Preferentially interacts with unmethylated DNA, preventing spreading of CpG methylation. Can dimerize, mediating long-range chromatin looping. When bound to chromatin, provides an anchor point for nucleosomes positioning. Involved in sister chromatid cohesion. Associates with both centromeres and chromosomal arms during metaphase and required for cohesin localization to CTCF sites.|Goat polyclonal, epitope mapping near the C-terminus of CTCF of human origin. Antibody Target: CTCF|CH12 Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140371 Max|sc-197|The protein encoded by this gene is a member of the basic helix-loop-helix leucine zipper (bHLHZ) family of transcription factors. It is able to form homodimers and heterodimers with other family members, which include Mad, Mxi1 and Myc. Myc is an oncoprotein implicated in cell proliferation, differentiation and apoptosis. The homodimers and heterodimers compete for a common DNA target site (the E box) and rearrangement among these dimer forms provides a complex system of transcriptional regulation. Multiple alternatively spliced transcript variants have been described for this gene but the full-length nature for some of them is unknown (RefSeq).|Rabbit polyclonal IgG, epitope mapping at the C-terminus of Max of human origin. Antibody Target: Max|CH12 Oth@ Max 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140369 c-Myc|sc-764|transcription factor; c-Myc-encoded proteins function in cell proliferation,differentiation and neoplastic disease|rabbit polyclonal to amino acids 1-262 of c-Myc human origin. Antibody Target: c-Myc|CH12 Oth@ Myc 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140366 c-Myb_(SC-7874)|sc-7874|Transcriptional activator; DNA-binding protein that specifically recognize the sequence 5'-YAACGTG-3'. Plays an important role in the control of proliferation and differentiation of hematopoietic progenitor cells.|Rabbit polyclonal IgG, Epitope corresponding to amino acids 500-640 mapping at the C-terminus of c-Myb of human origin. Antibody Target: c-Myb|MEL Oth@ Myb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140365 JunD|sc-74|The protein encoded by this intronless gene is a member of the JUN family, and a functional component of the AP1 transcription factor complex. It has been proposed to protect cells from p53-dependent senescence and apoptosis. Alternate translation initiation site usage results in the production of different isoforms. (provided by RefSeq)|rabbit polyclonal IgG. Antibody Target: JunD|CH12 Oth@ Jund 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140364 c-Jun|sc-1694|Heterodimer of Fos and Jun constitute transcription factor AP1. Proto-oncogene c-Jun is a leucine-zipper.|Rabbit polyclonal to amino acids 1-79 mapping at the N-terminus of c-Jun p39 of human origin. Antibody Target: c-Jun|CH12 Oth@ Jun 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140363 TBP|ab62126|General transcription factor that functions at the core of the DNA-binding multiprotein factor TFIID. Binding of TFIID to the TATA box is the initial transcriptional step of the pre-initiation complex (PIC), playing a role in the activation of eukaryotic genes transcribed by RNA polymerase II. Component of the transcription factor SL1/TIF-IB complex, which is involved in the assembly of the PIC (preinitiation complex) during RNA polymerase I-dependent transcription.|Mouse monoclonal. Immunogen is synthetic peptide conjugated to KLH derived from within residues 1 - 100 of HumanTATA binding protein TBP. Antibody Target: TBP|CH12 Oth@ Tbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140361 MafK_(ab50322)|ab50322|NFE2 DNA-binding activity consists of a heterodimer containing an 18-kD Maf protein (MafF, MafG, or MafK) and p45. Both subunits are members of the activator protein-1 superfamily of basic leucine zipper (bZIP)proteins. Since they lack a putative transactivation domain, small Mafs behave as transcriptional repressors when they dimerize among themselves. They serve as transcriptional activators by dimerizing with other (usually larger) bZip proteins and recruiting them to specific DNA-binding sites.|Rabbit polyclonal. Raised against synthetic peptide: TTNPKPNKALKVKKEA conjugated to KLH by a C-terminal Cysteine residue linker, corresponding to amino acids 2-17 of Human MAFK. Antibody Target: MafK|CH12 Oth@ Mafk 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140356 p300_(SC-584)|sc-584|Encodes the adenovirus E1A-associated cellular p300 transcriptional co-activator protein. Functions as histone acetyltransferase and regulates transcription via chromatin remodeling. Acetylates all four core histones in nucleosomes. Mediates cAMP-gene regulation by binding specifically to phosphorylated CREB protein|Rabbit polyclonal IgG, epitope mapping at the N-terminus of p300 of human origin. Antibody Target: P300|MEL Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140354 Pol2|MMS-126R|RNA Polymerase II|mouse monoclonal, clone 8WG16. Antibody Target: POL2|CH12 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140345 anti-GFP goat polyclonal|C2C12_GFP, GFP ChIP Oth@ GFP 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140344 anti-GFP goat polyclonal|C2C12_NICDGFP, GFP ChIP Oth@ GFP 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140343 anti-RBP-J 1F1 rat monoclonal|C2C12_GFP, RBP-J 1F1 ChIP Oth@ Rbpj 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140342 anti-RBP-J 1F1 rat monoclonal|C2C12_NICDGFP, RBP-J 1F1 ChIP Oth@ Rbpj 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140336 anti-p300 rabbit polyclonal|C2C12, DAPT 24h, p300 ChIP Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140335 anti-p300 rabbit polyclonal|C2C12, Delta 24h, p300 ChIP Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140334 anti-p300 rabbit polyclonal|C2C12, DAPT 6h, p300 ChIP Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140333 anti-p300 rabbit polyclonal|C2C12, Delta 6h, p300 ChIP Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140332 anti-RBP-J rabbit polyclonal|C2C12, DAPT 6h, RBP-J ChIP Oth@ Rbpj 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140331 anti-RBP-J rabbit polyclonal|C2C12, Delta 6h, RBP-J ChIP Oth@ Rbpj 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX140326 none|C2C12, Delta 6h, ChIP input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX139883 none|Mouse embryonic day 11.5 (e11.5) neural tube, control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX139882 anti-FLAG Sigma- F1804 1mg/ml -Monoclonal ANTI-FLAG M2 antibody produced in mouse. Lot #: 088K6018|Mouse embryonic day 11.5 (e11.5) neural tube, FLAG-ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX139881 none|Mouse embryonic day 11.5 (e11.5) limb, control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX139880 anti-FLAG Sigma- F1804 1mg/ml -Monoclonal ANTI-FLAG M2 antibody produced in mouse. Lot #: 088K6018|Mouse embryonic day 11.5 (e11.5) limb, FLAG-ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX139879 none|Mouse embryonic day 11.5 (e11.5) forebrain, control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX139878 anti-FLAG Sigma- F1804 1mg/ml -Monoclonal ANTI-FLAG M2 antibody produced in mouse. Lot #: 088K6018|Mouse embryonic day 11.5 (e11.5) forebrain, FLAG-ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX139877 anti-FLAG Sigma- F1804 1mg/ml -Monoclonal ANTI-FLAG M2 antibody produced in mouse. Lot #: 088K6018|Mouse embryonic day 11.5 (e11.5) face, FLAG-ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX134778 H3K9me3 (Diagenode, pAb-056-050)|B cell enriched splenocytes from KAP1 KO mouse His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX134777 H3K9me3 (Diagenode, pAb-056-050)|B cell enriched splenocytes His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX134775 RBCC (Schultz et al. Genes Dev. 2001)|B cell enriched splenocytes from KAP1 KO mouse Oth@ Trim28 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX134774 RBCC (Schultz et al. Genes Dev. 2001)|B cell enriched splenocytes Oth@ Trim28 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX131983 anti-BMAL1 (Abcam; #ab3350-200; lot 805009)|Liver Oth@ Arntl 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX131982 anti-CLK (Novus Biological; #NB100-126; lot B1)|Liver Oth@ Clock 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130599 JMJD3|neural stem cells Oth@ Kdm6b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130598 Smad3|neural stem cells Oth@ Smad3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130592 Wild type 3t3 pulled down with V5 antibody V5- Abcam (ab15828)|In-vitro cell culture of NIH_3T3 cell Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130591 V5 tagged Bapx1 over expressed in NIH_3T3 cells V5- Abcam (ab15828)|In-vitro cell culture of NIH_3T3 cell Oth@ Nkx3-2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130590 IgG|Embryonic day 12.5 vertebral column pulled down with IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130589 Sox9 R&D system (AF3075)|Embryonic day 12.5 vertebral column Oth@ Sox9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130588 S-pepetide in wild type embryo S-Pepetide - Bethyl laboratories (A-190-134A)|Embryonic day 12.5 vertebral column of wild type mice Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130587 S-peptide tagged Bapx1 S-Pepetide - Bethyl laboratories (A-190-134A)|Embryonic day 12.5 vertebral column Oth@ Nkx3-2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130471 M2 Flag-agarose beads|Bone marrow cells_flagCbx8_flagChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130470 M2 Flag-agarose beads|Bone marrow cells_flagCbx7_flagChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130469 M2 Flag-agarose beads|Bone marrow cells_empty vector_flagChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130273 H3K4me3|Bone Marrow_H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130272 O-GlcNAc|Bone Marrow_OGlcNAc Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130271 Tet2|Bone Marrow_Tet2 Oth@ Tet2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130175 None|asynchrnous G1E-ER4+E2 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130174 GATA1 (Santacruz,clone N6, sc-265)|asynchrnous G1E-ER4+E2 cells Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130173 None|mitotic G1E-ER4+E2 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130172 GATA1 (Santacruz,clone N6, sc-265)|mitotic G1E-ER4+E2 cells Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130026 Brg1|Lab Generated (Crabtree) J1|Chromatin IP against Brg1 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130024 H3K4me3|Abcam AB8550|Chromatin IP against H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130021 H3K9Ac,K14Ac|Upstate 06-599|Chromatin IP against H3K9,K14Ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130019 SA1|Bethyl A300-157A|Chromatin IP against SA1 Oth@ Stag1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX130018 SA2|Bethyl A300-158A|Chromatin IP against SA2 Oth@ Stag2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX129065 none|uterus InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX128354 Anti-V5 Agarose Affinity Gel antibody produced in mouse purified immunoglobulin, clone V5-10|V5-tagged REX1_ESCs Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX128353 WT_ESCs Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX128218 anti-Flag antibody|ZHBTc4 F-Oct4_alpha-Oct4-SWGA Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX128217 anti-Flag antibody|ZHBTc4 F-Oct4_input_IgG_control Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX128176 Rev-erb(alpha)|Homogenized mouse liver, Rev-erb(alpha) KO, 5pm/ZT10, Rev-erb(alpha) ChIP Oth@ Nr1d1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX128175 Rev-erb(beta)|Homogenized mouse liver, WT, 5am/ZT22, Rev-erb(beta) ChIP Oth@ Nr1d2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX128174 Rev-erb(beta)|Homogenized mouse liver, WT, 5pm/ZT10, Rev-erb(beta) ChIP Oth@ Nr1d2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127408 H3K4me2|HPC H3K4me2 ChIPseq His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127406 H3K4me2|MEF H3K4me2 ChIPseq His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127397 H3K4me2|ESC H3K4me2 ChIPseq His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127395 H3K4me3|HPC H3K4me3 ChIPseq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127393 H3K4me3|MEF H3K4me3 ChIPseq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127384 H3K4me3|ESC H3K4me3 ChIPseq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127382 H3K27me3|HPC H3K27me3 ChIPseq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127380 H3K27me3|MEF H3K27me3 ChIPseq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127371 H3K27me3|ESC H3K27me3 ChIPseq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127366 MEF input DNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX127357 ESC input DNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX125274 CTCF (Millipore; 07-729 DAM1772428)|Neural progenitor cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX125273 Smc1 (Bethyl; A300-055A)|Neural progenitor cells Oth@ Smc1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX125263 anti-H4Ac (anti-acetyl-histone H4)|Unstimulated macrophages, Foxo3 knockout, H4Ac ChIP His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX125262 anti-H4Ac (anti-acetyl-histone H4)|Unstimulated macrophages, wildtype, H4Ac ChIP His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX125261 anti-Foxo3a (FKHRL1 (H-144))|Unstimulated macrophages, wildtype, Foxo3a ChIP Oth@ Foxo3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122651 H3K9me3|mESC E14 under Activin A differentiation, day 6 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122650 H3K4me3|mESC E14 under Activin A differentiation, day 6 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122649 H3K4me2|mESC E14 under Activin A differentiation, day 6 His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122648 H3K4me1|mESC E14 under Activin A differentiation, day 6 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122647 H3K36me3|mESC E14 under Activin A differentiation, day 6 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122646 H3K27me3|mESC E14 under Activin A differentiation, day 6 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122645 H3K27ac|mESC E14 under Activin A differentiation, day 6 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122644 H2AZ|mESC E14 under Activin A differentiation, day 6 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122642 H3K9me3|mESC E14 under Activin A differentiation, day 4 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122641 H3K4me3|mESC E14 under Activin A differentiation, day 4 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122640 H3K4me2|mESC E14 under Activin A differentiation, day 4 His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122639 H3K4me1|mESC E14 under Activin A differentiation, day 4 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122638 H3K36me3|mESC E14 under Activin A differentiation, day 4 His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122637 H3K27me3|mESC E14 under Activin A differentiation, day 4 His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122636 H3K27ac|mESC E14 under Activin A differentiation, day 4 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122635 H2AZ|mESC E14 under Activin A differentiation, day 4 His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122633 H3K4me3|mouse embryonic stem cells (E14) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122632 H3K4me2|mouse embryonic stem cells (E14) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122631 H3K4me1|mouse embryonic stem cells (E14) His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122630 H3K36me3|mouse embryonic stem cells (E14) His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122629 H3K27me3|mouse embryonic stem cells (E14) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122628 H3K27ac|mouse embryonic stem cells (E14) His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122627 H2AZ|mouse embryonic stem cells (E14) His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122624 IgG|mouse embryonic stem cells (E14) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX122623 TAF1|mouse embryonic stem cells (E14) Oth@ Taf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX121187 anti-Nkx3.1 (Santa Cruz Biotechnology, sc-15022)|Nkx3-1_KO_ChIP-Seq Oth@ Nkx3-1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX120433 H3K4me3; abcam; lot# GR37544-1; catalog# ab8580|splenic B cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX120432 H3K4me2; millipore; lot# DAM1724042; catalog# 07-030|splenic B cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX120425 NA|splenic B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX120424 Ebf1 (custom-made against murine Ebf1b)|splenic B cells Oth@ Ebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX120062 anti-H3K27ac|embryonic hindlimb bud His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX120061 none|embryonic hindlimb bud InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX120060 anti-H3K27ac|embryonic forelimb bud His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX120059 none|embryonic forelimb bud InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX119598 IgG|sc-2027, lot number C0411|3T3-L1 differentiated TNF InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX119597 p65|abcam 7970, lot number GR51446-1|3T3-L1 differentiated TNF Oth@ Rela 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX119326 G1ME cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118693 anti-RAR|murine embryonic stem cells grown as embryoid bodies for 4 days and treated 24 hours with 5 micromolar all trans retinoic acid Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118692 anti-RAR|murine embryonic stem cells grown as embryoid bodies for 4 days and treated 2 hours with 5 micromolar all trans retinoic acid Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118398 Anti-H3K4me3 Millipore (#07-473)|Anti-H3K4me3 Spo11-/-_testis_ChIP-Seq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118397 Anti-H3K4me3 Millipore (#07-473)|Anti-H3K4me3 Prdm9-/-_liver_ChIP-Seq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118396 Anti-H3K4me3 Millipore (#07-473)|Anti-H3K4me3 Prdm9-/-_testis_ChIP-Seq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118395 Anti-H3K4me3 Millipore (#07-473)|Anti-H3K4me3 9R_testis_ChIP-Seq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118394 Anti-H3K4me3 Millipore (#07-473)|Anti-H3K4me3 13R_testis_ChIP-Seq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118197 none|Rbp2 f/f ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118196 Anti-trimethyl-Histone H3 (Lys4)|Rbp2 KO ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118195 Anti-trimethyl-Histone H3 (Lys4)|Rbp2 f/f ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118174 PPARalpha|C57BL/6 LXRdKO mouse liver Oth@ Ppara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118173 PPARalpha|C57BL/6 wild type mouse liver Oth@ Ppara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX118006 none, input DNA|ES-cell derived erythroid progenitors InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX117955 none|Cardiac progenitor cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX117815 mm9ES_Vezf1 ko_Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX117814 Anti-RNA polymerase II CTD repeat YSPTSPS (phospho S2) antibody|mm9ES_Vezf1_ko_RNA Polymerase 2 ChIP-Seq Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX117813 mm9ES_wt_Input DNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX117812 Anti-RNA polymerase II CTD repeat YSPTSPS (phospho S2) antibody|mm9ES_wt_RNA Polymerase 2 ChIP-Seq Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX117691 H3K4me3|Pro-B_H3K4me3 ChIP-seq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX117690 H3R2me2sK4me3|Pro-B_H3R2me2sK4me3 ChIP-seq His@ H3R2me2K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX117689 H3R2me2s|Pro-B_H3R2me2s ChIP-seq His@ H3R2me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX116909 ChIP/ antibody against Tcf4|Transgenic Hepatocytes Oth@ Tcf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX116907 Tcf4 (mouse monoclonal, clone 6H5-3)|05-511|Transgenic Hepatocytes Oth@ Tcf4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX116906 beta-catenin (mouse monoclonal, clone 14)|610154|Transgenic Hepatocytes Oth@ Ctnnb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1165111 FLAG M2 Sigma F1804|mouse V6.5 ES Cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX116273 Nkx2-5 (N-19)|WT_Nkx2-5_ChIP Oth@ Nkx2-5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX116272 Gata4 (C-20)|WT_Gata4_ChIP Oth@ Gata4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX116271 Tbx3 (A-20)|Myh6-MCM_control_Tbx3_ChIP Oth@ Tbx3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX116270 Tbx3 (A-20)|Myh6-MCM;CAG-CAT-TBX3_Tbx3_ChIP Oth@ Tbx3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1161945 RFX3|mouse pancreatic beta cell line MIN6 Oth@ Rfx3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1161944 RFX1|mouse pancreatic beta cell line MIN6 Oth@ Rfx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1159964 rabbit H3K4me1 antibody (Abcam, ab8895)|Low fat diet His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1159963 rabbit H3K4me1 antibody (Abcam, ab8895)|High fat diet His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115849 IgG|E14_IgG_ChIPSeq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115848 MacroH2A1 (Buschbeck et al, 2009, NSMB)|E14_MacroH2A_ChIPSeq His@ macroH2A1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115552 H3K27me3|leukemic spleen cells, secondary, Ezh2-null, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115551 H3K27me3|leukemic spleen cells, secondary, WT, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115550 H3K27me3|leukemic spleen cells, primary, Ezh2-null, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115549 H3K27me3|leukemic spleen cells, primary, WT, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115367 IgG control|MEF_STAT5-KO-empty-GH-IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115366 anti-STAT5|MEF_STAT5-KO-empty-GH-IP Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115365 IgG control|MEF_STAT5-KO-GH-IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115364 anti-STAT5|MEF_STAT5-KO-GH-IP Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115363 IgG control|MEF_STAT5-OE-GH-IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115361 IgG control|MEF_STAT5-OE-IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115359 IgG control|MEF_STAT5-WT-GH-IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115358 anti-STAT5|MEF_STAT5-WT-GH-IP Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX115001 H2A.Z|E14 embryonic stem cells His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114998 5-hmC|E14 embryonic stem cells Oth@ 5-hmC 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114997 H3K27ac|E14 embryonic stem cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114993 none (input)|T-ALL sonicated input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114992 Notch1|T-ALL Notch1 Oth@ Notch1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114726 none|Mouse uterus InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114725 PR|Mouse uterus epithelium Oth@ Pgr 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114689 acetyl-H4 antibody|P19_NeuroD2_acetylH4_ChIP-seq His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114688 acetyl-H4 antibody|P19_control_acetylH4_ChIP-seq His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114685 two NEUROD2 antibodies raised in rabbits by our lab (1240J, 1168J)|MM_NeuroD2_ChIP-seq Oth@ Neurod2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114684 two MyoD antibody raised in rabbits by our lab (6196 and 6975) and previously described (Tapscott et al., 1988)|MM_MyoD_ChIP-seq Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114683 two MyoD antibody raised in rabbits by our lab (6196 and 6975) and previously described (Tapscott et al., 1988)|P19_MyoD_ChIP-seq Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114682 two NEUROD2 antibodies raised in rabbits by our lab (1240J, 1168J)|P19_NeuroD2_ChIP-seq Oth@ Neurod2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX114681 preimmune serum|P19_preimmune serum_ChIP-seq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1133077 DNMT triple knockout mouse embryonic stem cell Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX113079 input|KH2 mES InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX113078 custom ELL, see Lin et al. 2010 (Mol. Cell)|KH2 mES Oth@ Ell 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112983 None|Mouse thymus InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112982 Active motif, 39133|Mouse thymus His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112981 Canvance, MMS-126R|Mouse thymus Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112980 Millipore, 05-745|Mouse thymus His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112979 Abcam, ab8895|Mouse thymus His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112978 Kim et al., 2007|Mouse thymus Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112977 None|Mouse testis InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112976 Active motif, 39133|Mouse testis His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112975 Canvance, MMS-126R|Mouse testis Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112974 Millipore, 05-745|Mouse testis His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112973 Abcam, ab8895|Mouse testis His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112972 Kim et al., 2007|Mouse testis Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112971 None|Mouse placenta InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112970 Active motif, 39133|Mouse placenta His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112969 Canvance, MMS-126R|Mouse placenta Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112968 Millipore, 05-745|Mouse placenta His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112967 Abcam, ab8895|Mouse placenta His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112966 Kim et al., 2007|Mouse placenta Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112965 None|Mouse olfactory bulb InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112964 Active motif, 39133|Mouse olfactory bulb His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112963 Canvance, MMS-126R|Mouse olfactory bulb Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112962 Millipore, 05-745|Mouse olfactory bulb His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112961 Abcam, ab8895|Mouse olfactory bulb His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112960 Kim et al., 2007|Mouse olfactory bulb Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112959 None|Mouse intestine InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112958 Active motif, 39133|Mouse intestine His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112957 Canvance, MMS-126R|Mouse intestine Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112956 Millipore, 05-745|Mouse intestine His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112955 Abcam, ab8895|Mouse intestine His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112954 Kim et al., 2007|Mouse intestine Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112953 None|Mouse E14.5 liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112952 Active motif, 39133|Mouse E14.5 liver His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112951 Canvance, MMS-126R|Mouse E14.5 liver Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112950 Millipore, 05-745|Mouse E14.5 liver His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112949 Abcam, ab8895|Mouse E14.5 liver His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112948 Kim et al., 2007|Mouse E14.5 liver Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112947 None|Mouse E14.5 limb InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112946 Active motif, 39133|Mouse E14.5 limb His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112945 Canvance, MMS-126R|Mouse E14.5 limb Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112944 Millipore, 05-745|Mouse E14.5 limb His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112943 Abcam, ab8895|Mouse E14.5 limb His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112942 Kim et al., 2007|Mouse E14.5 limb Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112941 None|Mouse E14.5 heart InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112940 Active motif, 39133|Mouse E14.5 heart His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112939 Canvance, MMS-126R|Mouse E14.5 heart Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112938 Millipore, 05-745|Mouse E14.5 heart His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112937 Abcam, ab8895|Mouse E14.5 heart His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112936 Kim et al., 2007|Mouse E14.5 heart Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112935 None|Mouse E14.5 brain InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112934 Active motif, 39133|Mouse E14.5 brain His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112933 Canvance, MMS-126R|Mouse E14.5 brain Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112932 Millipore, 05-745|Mouse E14.5 brain His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112931 Abcam, ab8895|Mouse E14.5 brain His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112930 Kim et al., 2007|Mouse E14.5 brain Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112929 Active motif, 39133|Mouse spleen His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112928 Active motif, 39133|Bruce4 embryonic stem cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112927 Active motif, 39133|Mouse embryonic fibroblast His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112926 Active motif, 39133|Mouse lung His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112925 Active motif, 39133|Mouse liver His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112924 Active motif, 39133|Mouse kidney His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112923 Active motif, 39133|Mouse heart His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112922 Active motif, 39133|Mouse cortex His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112921 Active motif, 39133|Mouse cerebellum His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112920 Active motif, 39133|Mouse bone marrow His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112919 N/A|Mixture of various non-specific antibodies|B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112918 AID|Santa Cruz rabbit polyclonal anti-AID antibody (Catalog No. sc-25620)|Activated B cells Oth@ Aicda 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112905 BCL6|wild-type primary bone marrow-derived macrophages Oth@ Bcl6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112512 none|Mouse villus cell input DNA InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112511 Millipore 07-030, lots DAM1570816 and DAM1724043|H3K4me2 ChIP-Seq in Cdx2-Hnf4a D KO mouse villus cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112510 Millipore 07-030, lots DAM1570816 and DAM1724042|H3K4me2 ChIP-Seq in Cdx2-Hnf4a D KO mouse villus cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112509 Millipore 07-030, lots DAM1570816 and DAM1724042|H3K4me2 ChIP-Seq in Hnf4a KO mouse villus cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112508 Millipore 07-030, lots DAM1570816 and DAM1724042|H3K4me2 ChIP-Seq in Cdx2 KO mouse villus cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112507 Millipore 07-030, lots DAM1570816 and DAM1724042|H3K4me2 ChIP-Seq in WT mouse villus cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112506 HNF4 c-19 (Santa Cruz 6556, lot c1810)|Hnf4a ChIP-Seq in Cdx2 KO mouse villus cells Oth@ Hnf4a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112505 HNF4 c-19 (Santa Cruz 6556, lot c1810)|Hnf4a ChIP-Seq in WT mouse villus cells Oth@ Hnf4a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112504 Bethyl BL3194, lotA300-691A-1|CDX2 ChIP-Seq in Hnf4a KO mouse villus cells Oth@ Cdx2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112183 none|A-20|Undifferentiated ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112182 Control|none|Undifferentiated ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112181 H3K36me3|13C9|Undifferentiated ES cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112180 H2Aub1|E6C5 (Upstate)|Undifferentiated ES cells His@ H2Aub 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112179 RNAPII S2P|H5 (MMS-129R, Covance)|Undifferentiated ES cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112178 RNAPII 8WG16|8WG16 (MMS-126R, Covance)|Undifferentiated ES cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX112177 RNAPII S7P|4E12|Undifferentiated ES cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1121699 H3K4me2 (Abcam, Ab7766)|cardiomyocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1121694 none|cardiomyocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX111898 mouse ES cells, shMLL4, H2A.Z ChIP His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX111893 mouse ES cells, shluc control, H2A.Z ChIP His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX111870 mouse ES cells, WT, acetylated H2A.Z ChIP His@ H2A.Zac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX111869 mouse ES cells, WT, H2A.Z ChIP His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1114461 Primary splenic cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX111395 LRH-1|Lrh1 ChIP Oth@ Nr5a2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX111394 none|input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110650 anti-MLL1|MLL-AF9 transfromed blasts Oth@ Kmt2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110640 CoREST|AB32631|Embryonic stem cells Oth@ Rcor1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110639 IgG|IgG_ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110637 anti-EGR2 (Krox-20)|VA14tg_NKT_EGR2_ChIP Oth@ Egr2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110636 anti-EGR2 (Krox-20)|anti-TCRb injected_thymocytes_EGR2_ChIP Oth@ Egr2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110459 none|none|3T3-L1 cells (ATCC #CL-173) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110219 None|Input DNA for H3K36me3 ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110218 anti-H3K36me3|H3K36me3 ChIP His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110217 None|input DNA for H3K4me3 ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110216 anti-H3K4me3|H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110153 V5|ES_CTCFL_V5_NODOX Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110152 V5|ES_CTCFL_V5_DOX Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX110151 CTCF|ES_CTCF Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109476 none|INK4A/ARF -/- mNPC 2 Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109475 none|INK4A/ARF -/- mNPC 1 Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109474 anti-BMI1|INK4A/ARF -/- Astrocytes BMI1 Oth@ Bmi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109473 anti-BMI1|INK4A/ARF -/- mGIC BMI1 Oth@ Bmi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109472 anti-BMI1|INK4A/ARF -/- mNPC 2 BMI1 Oth@ Bmi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109471 anti-BMI1|INK4A/ARF -/- mNPC 1 BMI1 Oth@ Bmi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109463 none|liver input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109462 REV-ERB beta|liver_REV-ERB beta_ChIP Oth@ Nr1d2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109461 REV-ERB alpha|liver_REV-ERB alpha_ChIP Oth@ Nr1d1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109460 none|EB cells cultured with a hematopietic cytokine cocktail for 20 days InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109459 anti-HoxB4|EB cells cultured with a hematopietic cytokine cocktail for 20 days Oth@ Hoxb4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109458 none|EB cells cultured with a hematopietic cytokine cocktail for 10 days InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109457 anti-HoxB4|EB cells cultured with a hematopietic cytokine cocktail for 10 days Oth@ Hoxb4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109456 none|day 6 embryoid body cels InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX109455 anti-HoxB4|day 6 embryoid body cells Oth@ Hoxb4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092956 C/EBPa, sc-61, Santa Cruz|AAV_Cebpa_rep2 Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092955 C/EBPa, sc-61, Santa Cruz|AAV_Cebpa_rep1 Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092954 C/EBPa, sc-61, Santa Cruz|AAV_Null_rep2 Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092953 C/EBPa, sc-61, Santa Cruz|AAV_Null_rep1 Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092952 C/EBPa, sc-61, Santa Cruz|Trib1_LSKO_rep2 Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092951 C/EBPa, sc-61, Santa Cruz|Trib1_LSKO_rep1 Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092950 C/EBPa, sc-61, Santa Cruz|Trib1_WT_rep2 Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092949 C/EBPa, sc-61, Santa Cruz|Trib1_WT_rep1 Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092375 Rabbit IgG|mouse ES cell (TKO) Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092374 DAXX antibody (SC-7152)|mouse ES cell (TKO) Oth@ Daxx 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092373 ATRX antibody (SC-15408)|mouse ES cell (TKO) Oth@ Atrx 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092372 Rabbit IgG|mouse ES cell (J1) Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092371 DAXX antibody (SC-7152)|mouse ES cell (J1) Oth@ Daxx 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1092370 ATRX antibody (SC-15408)|mouse ES cell (J1) Oth@ Atrx 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1091834 none|Mouse Round spermatids InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1091833 custom rabbit polyclonal BORIS (characterized in PMID:20231363)|Mouse Round spermatids Oth@ Ctcfl 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1091832 custom mouse monoclonal CTCF (characterized in PMID:15731119)|Mouse Round spermatids Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1091124 anti-IRF8 (Santa Cruz, C-19)|GC B cells Oth@ Irf8 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1077593 anti-NR4A1 antibody, clone H1648 (Perseus Proteomics, catalog# PP-H1648-00, lot# A-1)|Regulatory T (Treg) cells Oth@ Nr4a1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX107356 in-house polyclonal Ab against RXRa|mRXRa(1) Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX107355 in-house polyclonal Ab against RXRa|mRXRa 100xfold-diluted LinDA Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX107354 in-house polyclonal Ab against RXRa and RAR|mRXRa RARg reChIP LinDA Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX107340 na|Whole Thymus Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX107338 T-bet|primary CD4+ T cells from spleen and lymph nodes Oth@ Tbx21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX107321 CTCF|anti-CTCF|Mouse Mature B cells, Spleen, in vitro LPS/IL-4 activated Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1072342 embryonic stem cells_input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1072341 embryonic stem cells_ChIP Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060577 -|genomic DNA, Mnase Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060572 Mouse anti-H3K27me3 (Active Motif:39535)|genomic DNA, Mnase His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060551 Rabbit anti-H3K4me3 (Cell Signaling: #9751)|genomic DNA, Mnase His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1060549 Mouse anti-RNA Polymerase II, CTD clone 8WG16 (Millipore: 05-952)|genomic DNA, Cross link Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058793 NA|Mutant-newborn-mouse-liver(GLP 3A homozygous) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058792 H3K9me2, mAbcam 1220|Mutant-newborn-mouse-liver(GLP 3A homozygous) His@ H3K9me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058791 NA|WT-newborn-mouse-liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058790 H3K9me2, mAbcam 1220|WT-newborn-mouse-liver His@ H3K9me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058360 Brn-2 Antibody (C-20); goat polyclonal|ES-derived NS5 cells_control Oth@ Pou3f2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058359 rabbit polyclonals|ES-derived NS5 cells_control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058358 Sox-2 Antibody (Y-17); goat polyclonal|ES-derived NS5 cells_control Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058357 Brn-2 Antibody (C-20); goat polyclonal|ES-derived NS5 cells_ChIP Oth@ Pou3f2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1058354 Sox-2 Antibody (Y-17); goat polyclonal|ES-derived NS5 cells_ChIP Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1057056 Embryonic Cortical NeuN+ Cells (E16.5) Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1056357 none|input DNA_+Tam InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1056356 H3K27me3 (Millipore: 07-449)|H3K27me3_ChIPSeq+Tam His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1056353 H3K27me3 (Millipore: 07-449)|H3K27me3_ChIPSeq_noTam His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1056352 none|H3K9me3_ChIPSeq_noTam InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105582 anti-H3K27ac (abcam cat# 4729-100)|H3K27ac_stim_3T3 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105463 IgG_thymocyte_Runx1KO_ChIPseq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105462 Ring1b_thymocyte_Runx1KO_ChIPseq Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105461 CBFb_thymocyte_Runx1KO_ChIPseq Oth@ Cbfb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105460 Runx1_thymocyte_Runx1KO_ChIPseq Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105459 IgG_thymocyte_control_ChIPseq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105458 Ring1b_thymocyte_control_ChIPseq Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105457 CBFb_thymocyte_control_ChIPseq Oth@ Cbfb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105456 Runx1_thymocyte_control_ChIPseq Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105455 Ring1b_alt_ab_ChIPseq Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105454 Runx1_for_Ring1b_alt_ab_ChIPseq Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105453 IgG_uninduced_ChIPseq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105452 Ring1b_uninduced_ChIPseq Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105451 CBFb_uninduced_ChIPseq Oth@ Cbfb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105450 Runx1_uninduced_ChIPseq Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105449 IgG_induced_ChIPseq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105448 Ring1b_induced_ChIPseq Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105447 CBFb_induced_ChIPseq Oth@ Cbfb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105446 Runx1_induced_ChIPseq Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105115 input|Input Macrophage Pool InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105114 H3K9Ac (Upstate Biotechnologies, 06-942)|HDAC3KO IL4 H3K9Ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105113 H3K9Ac (Upstate Biotechnologies, 06-942)|HDAC3KO No Treat H3K9Ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105112 H3K9Ac (Upstate Biotechnologies, 06-942)|Control IL4 H3K9Ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105111 H3K9Ac (Upstate Biotechnologies, 06-942)|Control No Treat H3K9Ac His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105110 HDAC3 (Abcam, ab7030)|IL4 HDAC3 Oth@ Hdac3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX105109 HDAC3 (Abcam, ab7030)|BSA HDAC3 Oth@ Hdac3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1046554 RAG1|Abelson Oth@ Rag1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX104410 His tag Cdk9(amino acids 204-372)|KH2 Oth@ Cdk9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1041627 Extraembryonic endoderm stem cell line2 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1041626 anti-Gata6 (R&D, catalog number AF1700)|Extraembryonic endoderm stem cell line2 Oth@ Gata6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1041625 Extraembryonic endoderm stem cell line1 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1041624 anti-Gata6 (R&D, catalog number AF1700)|Extraembryonic endoderm stem cell line1 Oth@ Gata6 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1041623 Mouse embryonic stem cell line2 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1041622 anti-FLAG (Sigma, catalog number F1804)|Mouse embryonic stem cell line2 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1041621 Mouse embryonic stem cell line1 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1041620 anti-FLAG (Sigma, catalog number F1804)|Mouse embryonic stem cell line1 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038478 Ebf1+/- ProB, no treatment, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038477 Pax5+/- ProB, no treatment, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038476 Ebf1+/- Pax5+/- ProB, no treatment, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038475 WT ProB, no treatment, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038474 Ebf1+/- ProB, no treatment, Ebf1 ChIP Oth@ Ebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038473 Pax5+/- ProB, no treatment, Ebf1 ChIP Oth@ Ebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038472 Ebf1+/- Pax5+/- ProB, no treatment, Ebf1 ChIP Oth@ Ebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038471 WT ProB, no treatment, Ebf1 ChIP Oth@ Ebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038028 Antibody pAB-030-050 Diagenode|100 eyes from E10.5 mouse embryos His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1038027 Antibody CS-037-100, Diagenode|100 eyes from E10.5 mouse embryos His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1037023 None|proxmial half site of small intestine InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035120 E17.5 Nsal chondrocytes Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035119 Sox9|E17.5 Nsal chondrocytes Oth@ Sox9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035117 rabbit IgG|p1 mouse rib chondrocytes Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035115 RNA_Pol_II|p1 mouse rib chondrocytes Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035114 p300|p1 mouse rib chondrocytes Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035113 H3K27ac|p1 mouse rib chondrocytes His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035112 H3K26me3|p1 mouse rib chondrocytes His@ H3K26me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035111 H3K27Me3|p1 mouse rib chondrocytes His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035110 H3K4Me3|p1 mouse rib chondrocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035109 H3K4me2|p1 mouse rib chondrocytes His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1035108 Sox9|p1 mouse rib chondrocytes Oth@ Sox9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103219 H3K36me3|C2C12 myotube His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103218 H3K27ac|C2C12 myotube His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103217 H3K27me3|C2C12 myotube His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103216 H3K4me1|C2C12 myotube His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103215 H3K4me2|C2C12 myotube His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103214 H3K4me3|C2C12 myotube His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103213 H3K36me3|C2C12 myoblast His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103212 H3K27ac|C2C12 myoblast His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103211 H3K27me3|C2C12 myoblast His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103210 H3K4me1|C2C12 myoblast His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103209 H3K4me2|C2C12 myoblast His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX103208 H3K4me3|C2C12 myoblast His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1030300 Sinoatrial node (SAN) cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1030299 ISL1|Sinoatrial node (SAN) cells Oth@ Isl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX102950 none|RA-treated P19.6 cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX102949 none|Untreated P19.6 cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX102948 anti-H3K27ac|RA-treated P19.6 cells, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX102947 anti-H3K27ac|Untreated P19.6 cells, H3K27ac ChIP His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1023382 none (Input DNA)|K14CreER SmoM2 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX1023381 Sox9 (Millipore, AB5535)|K14CreER SmoM2 cells Oth@ Sox9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX101698 Sox3 (T. Edlund)|C2C12 muscle progenitor cells Oth@ Sox3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX101693 IgG (Millipore)|Neurons InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX101594 anti-MEIS1|RA-treated P19.6 cells, MEIS1 ChIP Oth@ Meis1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX100317 Smad1|Santa Cruz SC-7965|Smad1 ChIP-Seq in mouse G1ER treated with BMP Oth@ Smad1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX100316 Gata1|Santa Cruz SC-265|Gata1 ChIP-Seq in mouse G1ER treated with BIO Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX100315 None|None WCE|Input ChIP-Seq in mouse G1ER treated with BIO InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX100314 Smad1|Santa Cruz SC-7965|Smad1 ChIP-Seq in mouse G1E treated with BMP Oth@ Smad1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX100313 Gata2|Santa Cruz SC-9008|Gata2 ChIP-Seq in mouse G1E treated with BMP Oth@ Gata2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX100312 None|None WCE|Input ChIP-Seq in mouse G1E treated with BMP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099897 pan anti-lysine crotonylation antibody|Round spermatids His@ Pan lysine crotonylation 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099896 pan anti-lysine acetylation antibody|Round spermatids His@ Pan lysine acetylation 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099895 None|Round spermatids InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099894 pan anti-lysine crotonylation antibody|Spermatocyte His@ Pan lysine crotonylation 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099893 pan anti-lysine acetylation antibody|Spermatocyte His@ Pan lysine acetylation 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099892 None|Spermatocyte InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099631 anti-acetyl-CBP/p300 (rabbit polyclonal)|MouseP2Heart_acCBP-p300 Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099627 H3K36me3|Terminally differentiated Neurons (TN) derived from mouse embryonic stem cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099626 H3K36me3|Terminally differentiated Neurons (TN) derived from mouse embryonic stem cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099621 AID|Rabbit polyclonal described in Chaudhuri et al., Nature (2003)|ActivatedBCell_AIDmm Oth@ Aicda 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099398 PolII|ab5131|mouse Ik knockout DP thymocytes Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099388 PolII|ab5131|mouse wt DP thymocytes Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099387 H3K36me3|ab9050|mouse wt DP thymocytes His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099386 H3K9ac2|06-599|mouse wt DP thymocytes His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099385 H3K27me3|07-449|mouse wt DP thymocytes His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099384 H3K4me3|ab8580 and 07-473|mouse wt DP thymocytes His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099383 homemade Mi2beta (Chd4)|mouse wt DP thymocytes Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099382 homemade Ikaros (Ikzf1)|mouse wt DP thymocytes Oth@ Ikzf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099381 none|mouse wt DP thymocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099380 homemade Mi2beta (Chd4)|mouse Ik knockout DP thymocytes Oth@ Chd4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099378 homemade Aiolos|mouse Ik knockout DP thymocytes Oth@ Ikzf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099358 streptavidin beads|MLL-AF9 transformed blasts Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099260 anti-H4ac (upstate cat# 06-866)|H4ac_stim_3T3 His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099259 anti-H4ac (upstate cat# 06-866)|H4ac_unstim_3T3 His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099258 anti-H4ac (upstate cat# 06-866)|H4ac_stim_DC His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099257 anti-H4ac (upstate cat# 06-866)|H4ac_unstim_DC His@ H4ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099255 anti-H3K27ac (abcam cat# 4729-100)|H3K27ac_unstim_3T3 His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099254 anti-H3K27ac (abcam cat# 4729-100)|H3K27ac_stim_DC His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099253 anti-H3K27ac (abcam cat# 4729-100)|H3K27ac_unstim_DC His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099252 anti-H3K4me1 (clone CMA302)|H3K4me1_stim_3T3 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099251 anti-H3K4me1 (clone CMA302)|H3K4me1_unstim_3T3 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099250 anti-H3K4me1 (clone CMA302)|H3K4me1_stim_DC His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099249 anti-H3K4me1 (clone CMA302)|H3K4me1_unstim_DC His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099244 anti-JmjD2-family (clone 34)|JmjD2_34_stim_DC Oth@ Kdm4a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099243 anti-JmjD2d (clone 1-7)|JmjD2d_stim_DC Oth@ Kdm4d 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099237 anti-H3K9me3 (clone 2F3)|H3K9me3_stim_3T3 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099236 anti-H3K9me3 (clone 2F3)|H3K9me3_unstim_3T3 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099235 anti-H3K9me3 (clone 2F3)|H3K9me3_stim_DC His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099234 anti-H3K9me3 (clone 2F3)|H3K9me3_unstim_DC His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX099210 none|Pool of all samples Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX097686 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|CH12 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX097643 Mouse monoclonal, H3K14ac_7G8|Embryonic stem cells His@ H3K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX097642 Mouse monoclonal, H3K14ac_13HH3_1A5.A1|Embryonic stem cells His@ H3K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX097641 Rabbit polyclonal, H3K9a|AB4441|Embryonic stem cells His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX096389 cJun|cJun-ChIP_1uM Dex_LPS Oth@ Jun 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX096388 cJun|cJun-ChIP_LPS Oth@ Jun 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX096387 p65|NF-kB/p65-ChIP_1uM Dex_LPS Oth@ Rela 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX096386 Glucocorticoid Receptor|GR-ChIP_1uM Dex_LPS Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX096385 Glucocorticoid Receptor|GR-ChIP_1uM Dex Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX096032 anti-H3K4me3 (Millipore 17-614)|T-helper 2 cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX096031 anti-H3K4me1 (Abcam Ab8895-100)|T-helper 2 cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX096020 TCF7L1 (M-20)|3T3-L1 cells Oth@ Tcf7l1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX095620 H3K4me1|Neural progenitor cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX095354 PolII|Brg1 KD-RNA Polymerase II ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX095353 PolII|Mbd3 KD-RNA Polymerase II ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX095352 PolII|EGFP KD-RNA Polymerase II ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX095351 Mbd3|Brg1 KD-Mbd3 ChIP Oth@ Mbd3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX095350 Mbd3|Tet1 KD-Mbd3 ChIP Oth@ Mbd3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX095343 FBio-Ctrl_ChIPseq Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX095342 FBio-Yy1_ChIPseq Oth@ Yy1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093318 none|Anterior trunk cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093317 H3K4me3|Anterior trunk cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093316 H3K27me3|Anterior trunk cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093315 H3K4me3|Forebrain cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093314 H3K27me3|Forebrain cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093165 IgG (isotypic control antibody) Abcam; Cat. no.: ab46540|NSCs & pOLs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093164 Anti Ezh2 Diagenode (http://www.diagenode.com/en/index.php); Cat. no.: CS-039-100; Lot no.: 001|Pre-myelinating oligodendrocytes (pOLs) Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093163 Anti Ezh2 Diagenode (http://www.diagenode.com/en/index.php); Cat. no.: CS-039-100; Lot no.: 001|Neural stem cells (NSCs) Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX093162 Gfi1|MLL-ENL immortalized bone marrow progenitor cells Oth@ Gfi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092601 anti-H3K27me3|07-449|Megakaryocyte Progenitor Cell Line (G1ME) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092600 anti-H3K4me3|07-473|Megakaryocyte Progenitor Cell Line (G1ME) His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092599 anti-ETS1|sc-350|Megakaryocyte Progenitor Cell Line (G1ME) Oth@ Ets1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092598 anti-HA|sc-7392|Megakaryocyte Progenitor Cell Line (G1ME) Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092597 anti-GATA2|sc-9008|Megakaryocyte Progenitor Cell Line (G1ME) Oth@ Gata2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092472 TCF7 goat polyclonal antibody TCF1(H18)|SC8589|EML cells Oth@ Tcf7 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092471 anti-Isl1/2 (gift from Dr. T. Jessell)|induced motor neurons (Day4 iNIL differentiation) Oth@ Isl1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092470 anti-V5 (Abcam, ab15828, Lot: 103968)|induced motor neurons (Day4 iNIL differentiation) Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092405 None|Input chromatin from IL-10 treated (4 hours) macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092404 None|Input chromatin from untreated macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092403 anti-STAT3 (Santa Cruz sc-482)|ChIP in IL-10 treated (4 hours) macrophages against STAT3 Oth@ Stat3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX092402 anti-STAT3 (Santa Cruz sc-482)|ChIP in untreated macrophages against STAT3 Oth@ Stat3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091898 anti-PolII|Embryonic stem cells, PolII ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091897 mock IgG|Embryonic stem cells, TBP/PolII mock InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091896 anti-TBP|ab62126|Embryonic stem cells, TBP ChIP Oth@ Tbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091895 mock IgG|Embryonic stem cells, TAF1 mock InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091894 anti-RAF1|Embryonic stem cells, TAF1 ChIP Oth@ Raf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091893 mock IgG|Embryonic stem cells, TAF3 mock InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091892 anti-TAF3|Embryonic stem cells, TAF3 ChIP Oth@ Taf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091683 None|ThyDP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091682 None|ThyDN3 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091681 None|FLDN2b InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091680 None|FLDN2a InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091679 None|FLDN1 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091678 GATA3 (Santa cruz sc-268)|ThyDP Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091677 GATA3 (Santa cruz sc-268)|FLDN2b Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091676 GATA3 (Santa cruz sc-268)|FLDN1 Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091675 PU.1 (Santa cruz sc-352)|ThyDP Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091674 PU.1 (Santa cruz sc-352)|FLDN2b Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091673 PU.1 (Santa cruz sc-352)|FLDN2a Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091672 PU.1 (Santa cruz sc-352)|FLDN1 Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091665 H3K27me3 (Millipore 07-449)|FLDN2a His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091656 H3K4me2 (Millipore 07-030)|FLDN2a His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX091647 H3K(9,14)Ac (Millipore 06-599)|FLDN2a His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX088970 KAP1 (RBCC)|KAP1 ChIP in E14 ES cells Oth@ Trim28 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX088969 HA|HA ChIP in ES cells expressing HAZFP57 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX088968 HA|HA ChIP in ES cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX087280 none|embryonal carcinoma cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085459 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|Spleen His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085454 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|Spleen His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085452 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|MEF His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085451 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|MEF His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085450 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|Cerebellum His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085449 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|Cortex His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085448 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|Heart His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085447 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|BoneMarrow His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085446 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|Kidney His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085445 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|Cortex His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085444 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|BoneMarrow His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085441 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|Cerebellum His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085440 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|Heart His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085439 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|Kidney His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085438 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|Liver His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085437 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|Liver His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085436 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|Lung His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085435 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|Lung His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085432 H3K4me1|ab8895|Histone H3 (mono methyl K4). Is associated with enhancers, and downstream of transcription starts.|rabbit polyclonal|ES-Bruce4 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085431 H3K4me3|07-473|Histone H3 (tri methyl K4). Marks promoters that are active or poised to be activated.|rabbit polyclonal|ES-Bruce4 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085353 Anti- Histone H3 trimethyl Lys4 (Active Motif, Catolog # 39159)|ChIP_H3K4me3_MLL4_KO_LPS_4h His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085352 Anti- Histone H3 trimethyl Lys4 (Active Motif, Catolog # 39159)|ChIP_H3K4me3_MLL4_KO_Untreated His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085351 Anti- Histone H3 trimethyl Lys4 (Active Motif, Catolog # 39159)|ChIP_H3K4me3_MLL4_HET_LPS_4h His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085350 Anti- Histone H3 trimethyl Lys4 (Active Motif, Catolog # 39159)|ChIP_H3K4me3_MLL4_HET_Untreated His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085106 CAPH2|Bethyl A302-276A|Embryonic stem cells Oth@ Ncaph2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX085105 CAPH2|Bethyl A300-275A|Embryonic stem cells Oth@ Ncaph2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX084837 none|Uninduced Id2-HPC cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX084828 H3K4me3|Id2-HPC cells induced under myeloid conditions, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX084827 H3K4me3|Id2-HPC cells induced under B-cell conditions, Cd19+, 120h, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX084826 H3K4me3|Uninduced Id2-HPC cells, 0h, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX084806 anti-Flag (Sigma, F1804-200UG)|Chromatin IP against Flag Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX084803 Olig2 (Millipore, ab9610)|Chromatin IP against Olig2 Oth@ Olig2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX083256 H3K36me3|Mature CD8+ T cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX083255 H3K4me3|Mature CD8+ T cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX083254 none|Mature CD8+ T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX083253 H3K36me3|Mature CD4+ T cells His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX083252 H3K4me3|Mature CD4+ T cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX083251 none|Mature CD4+ T cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX082179 none|Rag2-/- thymocytes, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX082178 anti-H3K4me1|Rag2-/- thymocytes, anti-CD3e Ab injection, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX082177 anti-H3K4me1|Rag2-/- thymocytes, H3K4me1 ChIP His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX082176 anti-E2A|Rag2-/- thymocytes, anti-CD3e Ab injection, E2A ChIP Oth@ Tcf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX082175 anti-E2A|Rag2-/- thymocytes, E2A ChIP Oth@ Tcf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX081540 H3K27me3 (Millipore 07-449 lot DAM1641103)|Pancreatic islets His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX081539 MafA (Abcam ab17976 lot 950583)|Pancreatic islets_MafA Oth@ Mafa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX081538 NeuroD1 (Santa Cruz sc-1084 X lot H1709)|Pancreatic islets_NeuroD1 Oth@ Neurod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX081537 H3K9me3 (Abcam ab8898 lot AP248039)|Liver_H3K9me3 His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX080250 Lin et al. 2010 (Mol. Cell.)|KH2 Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX080181 anti-PolII(N20) (SantaCruz #sc-899)|ES_PolII_ChIPseq Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX080177 anti-monomethyl-H3K4 (Abcam #ab8895)|ES_H3K4me2_ChIPseq His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX080175 anti-monomethyl-H3K4 (Abcam #ab8895)|ES_H3K4me1_ChIPseq His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX080174 anti-H3K27me3 (Upstate 07-449)|ES_H3K27me3_ChIPseq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX079886 N/A|Ter119+ cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX079868 H3K4me3|ab8580|G1E cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX079867 H3K4me3|07-473|G1E cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX079860 N/A|G1E cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX077933 none|E12.5 heart apex. 120 hearts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX077932 Ezh2|E12.5 heart apex. 120 hearts Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX077931 H3K27me3|E12.5 heart apex. 120 hearts His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX077030 anti-Gata3 (558686, BD bioscience)|T-helper 2 cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX076064 H2A.Z|Chromatin IP against H2A.Z His@ H2A.Z 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX076063 H2A.Lap1-2|Chromatin IP against H2A.Lap1 (technical replicate) His@ H2A.Bbd1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX076062 H2A.Lap1|Chromatin IP against H2A.Lap1 His@ H2A.Bbd1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX070896 none|G4A2: input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX070895 Rabbit anti RBPJ|G4A2: RBPJ Chromatin IP Oth@ Rbpj 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX070894 Rabbit anti Notch1|G4A2: Notch1 Chromatin IP Oth@ Notch1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX070893 none|T6E: Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX070892 Rabbit anti RBPJ|T6E: RBPJ Chromatin IP Oth@ Rbpj 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX070891 Rabbit anti Notch1|T6E: Notch1 Chromatin IP Oth@ Notch1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX066547 Goat anti-GFP (kindly provided by Kevin P White, University of Chicago)|adult whole heart Oth@ GFP 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX065540 IgG|Runx1(Venus/+) ES cell line, IgG control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX065539 anti-Runx1|ab23980-100|FACS-sorted day 6 differentiated ES cells, Runx1+/VE-cadherin-/CD41+, Runx1 ChIP Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX065538 anti-Runx1|ab23980-100|FACS-sorted day 6 differentiated ES cells, Runx1+/VE-cadherin+/CD41-, Runx1 ChIP Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX065537 anti-Runx1|ab23980-100|FACS-sorted day 6 differentiated ES cells, Runx1+/VE-cadherin+/CD41+, Runx1 ChIP Oth@ Runx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063943 H3K9me3 (Active Motif, #39161, lot #170)|Embyonic Stem Cell His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063933 sc-293x|Primary T-cells Oth@ Ercc3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063932 sc-235x|Primary T-cells Oth@ Gtf2f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063931 sc-238x|Primary T-cells Oth@ Gtf2e2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063930 sc-225x|Primary T-cells Oth@ Gtf2b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063929 sc-25365x|Primary T-cells Oth@ Gtf2a2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063928 sc-17134x|Primary T-cells Oth@ Taf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063927 sc-350x|Primary T-cells Oth@ Ets1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063926 sc-899x|Primary T-cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063925 ab2832|Primary T-cells Oth@ Crebbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063911 anti-histone 3 lysine 4 trimethylation (anti-H3K4me3) (Abcam)|Lsh-/- H3K4me3 sequence His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX063910 anti-histone 3 lysine 4 trimethylation (anti-H3K4me3) (Abcam)|Lsh+/+ H3K4me3 sequence His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062996 none (Input)|None|Bruce4 embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062995 Pol2|Canvance, MMS-126R|Bruce4 embryonic stem cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062994 P300|Santa Cruz, sc585|Bruce4 embryonic stem cells Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062993 H3K4me3|Millipore, 05-745|Bruce4 embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062992 H3K4me1|Abcam, ab8895|Bruce4 embryonic stem cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062991 CTCF|Kim et al., 2007|Bruce4 embryonic stem cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062990 none (Input)|None|Mouse embryonic fibroblast InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062989 Pol2|Canvance, MMS-126R|Mouse embryonic fibroblast Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062988 H3K4me3|Millipore, 05-745|Mouse embryonic fibroblast His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062987 H3K4me1|Abcam, ab8895|Mouse embryonic fibroblast His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062986 CTCF|Kim et al., 2007|Mouse embryonic fibroblast Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062981 Pol2|Canvance, MMS-126R|Mouse spleen Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062978 CTCF|Kim et al., 2007|Mouse spleen Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062977 none (Input)|None|Mouse lung InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062976 Pol2|Canvance, MMS-126R|Mouse lung Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062975 P300|Santa Cruz, sc585|Mouse lung Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062974 H3K4me3|Millipore, 05-745|Mouse lung His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062973 H3K4me1|Abcam, ab8895|Mouse lung His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062972 CTCF|Kim et al., 2007|Mouse lung Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062971 none (Input)|None|Mouse liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062970 Pol2|Canvance, MMS-126R|Mouse liver Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062969 P300|Santa Cruz, sc585|Mouse liver Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062968 H3K4me3|Millipore, 05-745|Mouse liver His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062967 H3K4me1|Abcam, ab8895|Mouse liver His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062966 CTCF|Kim et al., 2007|Mouse liver Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062965 none (Input)|None|Mouse kidney InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062964 Pol2|Canvance, MMS-126R|Mouse kidney Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062963 P300|Santa Cruz, sc585|Mouse kidney Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062962 H3K4me3|Millipore, 05-745|Mouse kidney His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062961 H3K4me1|Abcam, ab8895|Mouse kidney His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062960 CTCF|Kim et al., 2007|Mouse kidney Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062959 none (Input)|None|Mouse heart InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062958 Pol2|Canvance, MMS-126R|Mouse heart Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062957 P300|Santa Cruz, sc585|Mouse heart Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062956 H3K4me3|Millipore, 05-745|Mouse heart His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062955 H3K4me1|Abcam, ab8895|Mouse heart His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062954 CTCF|Kim et al., 2007|Mouse heart Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062953 none (Input)|None|Mouse cerebellum InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062952 Pol2|Canvance, MMS-126R|Mouse cerebellum Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062951 H3K4me3|Millipore, 05-745|Mouse cerebellum His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062950 H3K4me1|Abcam, ab8895|Mouse cerebellum His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062949 CTCF|Kim et al., 2007|Mouse cerebellum Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062948 none (Input)|None|Mouse bone marrow InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062947 Pol2|Canvance, MMS-126R|Mouse bone marrow Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062946 H3K4me3|Millipore, 05-745|Mouse bone marrow His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062945 H3K4me1|Abcam, ab8895|Mouse bone marrow His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062944 CTCF|Kim et al., 2007|Mouse bone marrow Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062943 none (Input)|None|Mouse cortex InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062942 Pol2|Canvance, MMS-126R|Mouse cortex Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062941 H3K4me3|Millipore, 05-745|Mouse cortex His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062940 H3K4me1|Abcam, ab8895|Mouse cortex His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062939 CTCF|Kim et al., 2007|Mouse cortex Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062121 anti-H4K12Ac|07-595|C2C12 myotubes differentiated for 96h His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062120 anti-H4K12Ac|07-595|Growing C2C12 myoblasts His@ H4K12ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062119 anti-H3K18Ac|ab1191|C2C12 myotubes differentiated for 96h His@ H3K18ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062118 anti-H3K18Ac|ab1191|Growing C2C12 myoblasts His@ H3K18ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062117 anti-H3K9Ac|ab4441|C2C12 myotubes differentiated for 96h His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062116 anti-H3K9Ac|ab4441|Growing C2C12 myoblasts His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062113 anti-H3K36me3|ab9050|C2C12 myotubes differentiated for 96h His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062112 anti-H3K36me3|ab9050|Growing C2C12 myoblasts His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062111 anti-H3K27me3|ab6002|C2C12 myotubes differentiated for 96h His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062110 anti-H3K27me3|ab6002|Growing C2C12 myoblasts His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062109 anti-H3K4me3|ab8580|C2C12 myotubes differentiated for 96h His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062108 anti-H3K4me3|ab8580|Growing C2C12 myoblasts His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062107 anti-H3K4me2|ab32356|C2C12 myotubes differentiated for 96h His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062106 anti-H3K4me2|ab32356|Growing C2C12 myoblasts His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062105 anti-H3K4me1|ab8895|C2C12 myotubes differentiated for 96h His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062104 anti-H3K4me1|ab8895|Growing C2C12 myoblasts His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062103 anti-RnaPol2|8WG16|C2C12 myotubes differentiated for 96h Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX062102 anti-RnaPol2|8WG16|Growing C2C12 myoblasts Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061985 H3K79me2|murine L-GMP His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061984 H3K79me2|murine GMP His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061983 H3K79me2|murine HSC His@ H3K79me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061982 H3K36me3|murine L-GMP His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061981 H3K36me3|murine GMP His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061980 H3K36me3|murine HSC His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061979 H3K27me3|murine L-GMP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061978 H3K27me3|murine GMP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061977 H3K27me3|murine HSC His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061976 H3K4me3|murine L-GMP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061975 H3K4me3|murine GMP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX061974 H3K4me3|murine HSC His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX059749 p300|Control liver Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX059748 p300|Mutant liver Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX059747 CBP|Control liver Oth@ Crebbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX059746 CBP|Mutant liver Oth@ Crebbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX059745 HP1|Mutant liver Oth@ Cbx5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX059744 HP1|Control liver Oth@ Cbx5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057760 Sox2 produced in-house|2TS22C ES cells, +Tet, Day 2 Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057759 Sox2 produced in-house|ZHBTc4 ES cells, +Tet, Day 4 Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057758 Sox2 produced in-house|ZHBTc4 ES cells, +Tet, Day 3 Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057757 Sox2 produced in-house|ZHBTc4 ES cells, +Tet, Day 2 Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057756 Sox2 produced in-house|ZHBTc4 ES cells, +Tet, Day 1 Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057755 Sox2 produced in-house|ZHBTc4 ES cells, untreated Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057749 rabbit anti-5hmC antibody|39769|ES cells, Tet1 shRNA2863, hMeDIP Oth@ 5-hmC 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057748 none|ES cells, Tet1 shRNA2863, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057747 rabbit anti-5hmC antibody|39769|ES cells, Luc shRNA, hMeDIP Oth@ 5-hmC 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057746 none|ES cells, Luc shRNA, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057744 rabbit anti-5hmC antibody|39769|ES cells, hMeDIP Oth@ 5-hmC 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057742 rabbit polyclonal antibody against mouse Tet1 (made in-house)|ES cells, Tet1 ChIP Oth@ Tet1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057741 ES cells, Tet1 CXXC mutant2 Oth@ Tet1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057740 ES cells, Tet1 CXXC mutant1 Oth@ Tet1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX057739 ES cells, Tet1 CXXC Oth@ Tet1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX055320 none|Kdm5a f/f ES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX055319 1416 (Benevolenskaya et al.,Mol Cell 18, 623-635)|Kdm5a KO ES cells Oth@ Kdm5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX054581 anti-H3K4me3|07-473|Embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX054580 anti-Dpy-30|Embryonic stem cells Oth@ Dpy30 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047694 H3K4me2|Terminally differentiated Neurons (TN) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047690 none|Embryonic Stem Cells (ESCs) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047689 H3K4me2|Embryonic Stem Cells (ESCs) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047652 n/a|Preadipocyte cell line InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047648 RXR|Preadipocyte cell line Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047647 Stat5a|Preadipocyte cell line Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047646 GR|Preadipocyte cell line Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047219 anti-H3K27me3 (07-499; Millipore)|Th1 cells H3K27me3 ChIP-seq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047218 anti-H3K27me3 (07-499; Millipore)|Dendritic cells H3K27me3 ChIP-seq His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX047144 REST|Upstate 07-574|Embyonic stem cells Oth@ Rest 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX042233 none|266.6 Pancreatic Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX042232 Ptf1a (Beta Cell Biology Consortium)|266.6 Pancreatic Cells Oth@ Ptf1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX041881 Rad21|Rad21 ChIP DNA from Pro-B cells Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX041880 CTCF|Ctcf ChIP DNA from Mature B cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX041879 CTCF|Ctcf ChIP DNA from Pro-B cell Rag2-/- cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX041878 CTCF|Ctcf ChIP DNA from DP T wt cells Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX041281 STAT5B|Th1 cell Oth@ Stat5b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX041280 STAT5A|Th1 cell Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX041279 STAT4|Th1 cell Oth@ Stat4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX041278 IgG|Th1 cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX040547 anti-NCoR|Bcl6 knockout primary bone marrow-derived macrophages Oth@ Ncor1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX040546 anti-SMRT|Bcl6 knockout primary bone marrow-derived macrophages Oth@ Ncor2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX040545 anti-NCoR|wild-type primary bone marrow-derived macrophages Oth@ Ncor1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX040544 anti-SMRT|wild-type primary bone marrow-derived macrophages Oth@ Ncor2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039655 None|Negative control- input DNA, no immunoprecipitation InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039654 BRG (J1 antibody described in Genes Dev. 1996 Sep 1;10(17):2117-30, PubMed ID: 8804307)|Chromatin IP against BRG1, stimulated Th17 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039653 BRG (J1 antibody described in Genes Dev. 1996 Sep 1;10(17):2117-30, PubMed ID: 8804307)|Chromatin IP against BRG1, stimulated Th2 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039652 BRG (J1 antibody described in Genes Dev. 1996 Sep 1;10(17):2117-30, PubMed ID: 8804307)|Chromatin IP against BRG1, stimulated Th1 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039651 BRG (J1 antibody described in Genes Dev. 1996 Sep 1;10(17):2117-30, PubMed ID: 8804307)|Chromatin IP against BRG1, resting Th2 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039650 BRG (J1 antibody described in Genes Dev. 1996 Sep 1;10(17):2117-30, PubMed ID: 8804307)|Chromatin IP against BRG1, resting Th1 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039649 BRG (J1 antibody described in Genes Dev. 1996 Sep 1;10(17):2117-30, PubMed ID: 8804307)|Chromatin IP against BRG1, uNaive Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039484 Ets1 (santa cruz, cat#sc111X, Lot#G1905)|T-helper 2 cells Oth@ Ets1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039483 Fli1 (santa cruz, cat#sc356X, Lot#L0407)|T-helper 2 cells Oth@ Fli1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039346 anti-Flag|F3165|C2C12 cells expressing Flag-Msx1, Flag ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039345 anti-Flag|F3165|C2C12 cells infected with empty vector, Flag ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039036 H4K20me3|AB9053|Embryonic stem cells, H4K20me3 ChIP His@ H4K20me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039035 MCAF1|A300-169A|Embryonic stem cells, MCAF1 ChIP Oth@ Atf7ip 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039034 REST|07-579|Embryonic stem cells, REST ChIP Oth@ Rest 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX039033 Ring1b|Embryonic stem cells, Ring1b ChIP Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038928 RNA Pol II (Rpb1 N-terminus)|SC-899|Embryonic stem cells, control knockdown, total RNA pol2 ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038927 RNA Pol II (Rpb1 N-terminus)|SC-899|Embryonic stem cells, NelfE knockdown, total RNA pol2 ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038926 RNA Pol II (Rpb1 N-terminus)|SC-899|Embryonic stem cells, Spt5 knockdown, total RNA pol2 ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038925 RNA Pol II (Rpb1 N-terminus)|SC-899|Embryonic stem cells, Spt4 knockdown, total RNA pol2 ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038924 H3K9me3|AB8898|Mouse embryonic fibroblasts with Dox-inducible Klf4, Sox2 and Oct4 (KSO), H3K9me3 ChIP His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038923 H3K4me3|AB8580|Mouse embryonic fibroblasts, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038922 H3K9me3|AB8898|Mouse embryonic fibroblasts, H3K9me3 ChIP His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038921 H3K27me3|AB6002|Mouse embryonic fibroblasts, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX038444 none|Liver cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX037910 mixture of STAT5a (PA-ST5A: R&D) and STAT5b (PA-ST5B: R&D) antibodies, 2 ul each per IP|primary CD4+ T cells from spleen and lymph nodes Oth@ Stat5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX037909 5 ug of STAT3 (14-6727: eBioScience) per IP|primary CD4+ T cells from spleen and lymph nodes Oth@ Stat3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX037908 anti-FLAG antibody (Sigma)|SYTSSX2_FLAG_ChIP Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX037907 IgG antibody (Abcam)|Control_IgG_ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX036745 Rad21 (Millipore #ab992)|Rad21 ChIP Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX036744 CTCF (Millipore 07-729)|CTCF ChIP Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035993 IgG|Bone marrow hematopoietic progenitor cells enriched by depletion of Lin+ cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035992 anti-Gata2|Bone marrow hematopoietic progenitor cells enriched by depletion of Lin+ cells Oth@ Gata2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035991 anti-Scl/Tal1|Bone marrow hematopoietic progenitor cells enriched by depletion of Lin+ cells Oth@ Tal1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035990 anti-Ldb1|Bone marrow hematopoietic progenitor cells enriched by depletion of Lin+ cells Oth@ Ldb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035987 none|Uninduced MEFs InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035984 H3K36me3|Uninduced MEFs His@ H3K36me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035981 H3K4me3|Uninduced MEFs His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035978 H3K4me1|Uninduced MEFs His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035973 H3K27me3|Uninduced MEFs His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX035968 H3K4me2|Uninduced MEFs His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX033325 NA|Mouse Embryonic Stem Cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX033239 Pol2-S2P (Abcam H5 clone ab24758)|Day2+8hrs post-RA exposure Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032971 anti-H3K4me3 (07-473; Millipore)|Th1 cells H3K4me3 ChIP-seq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032970 anti-H3K4me3 (07-473; Millipore)|Dendritic cells H3K4me3 ChIP-seq His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032893 PPARgamma|sc-7196X|Mouse 3T3-L1 Adipocyte Culture Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032493 anti-RNA Pol II|Terminally differentiated Neurons (TN) Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032488 anti-H3K4me2|Terminally differentiated Neurons (TN) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032484 anti-RNA Pol II|Neuronal Progenitor (NP) Cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032479 anti-H3K4me2|Neuronal Progenitor (NP) Cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032475 none (input)|Embryonic Stem Cells (ESCs) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032474 anti-RNA Pol II|Embryonic Stem Cells (ESCs) Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032469 anti-H3K4me2|Embryonic Stem Cells (ESCs) His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX032465 Goat IgG isotype control|ESC InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX031664 YY1|sc-1703|Neural Progenitor Cells Oth@ Yy1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX031663 YY1|sc-1703|Embryonic Stem Cells Oth@ Yy1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX031218 Rabbit polyclonal to Histone H3K4me1, Abcam, Catalog ab8895 (lot 721955)|mouse ES cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX031217 mouse ES cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX029864 Sin3A from Santa Cruz|embryonic stem cells Oth@ Sin3a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX029863 Sin3A from Abcam|embryonic stem cells Oth@ Sin3a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX029286 H3K4me3|DC His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX028979 p65|primary bone marrow-derived macrophages Oth@ Rela 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX028529 Ring1B|Embryonic stem cells Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX028528 anti-H3K27me3|tissue|Spleen FFPE sections of leukemic blasts-injected mice, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX028527 none|tissue|Spleen FFPE sections of leukemic blasts-injected mice, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX028526 anti-H3K27me3|cells|Cells isolated from the spleen of leukemic blasts-injected mice, H3K27me3 ChIP His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX028525 none|cells|Cells isolated from the spleen of leukemic blasts-injected mice, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX028524 anti-H3K4me3|tissue|Spleen FFPE sections of leukemic blasts-injected mice, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX028523 anti-H3K4me3|cells|Cells isolated from the spleen of leukemic blasts-injected mice, H3K4me3 ChIP His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027462 RNA Pol II (8WG16)|Covance MMS-126R|Mouse Embryonic Fibroblasts with Dox-inducible Klf4, Sox2 and Oct4 (KSO) Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027461 H3K27me3|Abcam AB6002|Mouse Embryonic Fibroblasts with Dox-inducible Klf4, Sox2 and Oct4 (KSO) His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027460 E2F4|Santa Cruz SC-1082|Mouse Embryonic Fibroblasts with Dox-inducible Klf4, Sox2 and Oct4 (KSO) Oth@ E2f4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027454 input DNA|liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027453 H3K4me3|07-473|liver His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027452 input DNA|adult testis InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027451 H3K4me3|07-473|adult testis His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027450 input DNA and IgG|pups testis InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027446 input DNA and IgG|adult testis InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027351 H3K4me1|Abcam AB8895|iPS cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027350 H3|Abcam AB1791|mouse embryonic fibroblasts His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027349 H3K4me1|Abcam AB8895|mouse embryonic fibroblasts His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027348 none|proB cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027347 H3K4me3|Abcam AB8580|proB cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027346 H3|Abcam AB1791|proB cells His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027345 H3K27ac|Abcam AB4729|proB cells His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027344 H3K4me1|Abcam AB8895|proB cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027343 none|Whole Liver InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027342 H3K4me3|Abcam AB8580|Whole Liver His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027341 H3|Abcam AB1791|Whole Liver His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027340 H3K27ac|Abcam AB4729|Whole Liver His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027339 H3K4me1|Abcam AB8895|Whole Liver His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027338 H3K27ac|Abcam AB4729|Neural progenitors His@ H3K27ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027337 Rfx1|Santa Cruz s.c. 10562X|Neural progenitors Oth@ Rfx1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027334 H3K4me3|Abcam AB8580|Embyonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027333 H3|Abcam AB1791|Embyonic stem cells His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027112 PolII|Abcam (4H8) ab5408|ActivatedBCell_PolII Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX027111 AID|Rabbit polyclonal described in Chaudhuri et al., Nature (2003)|ActivatedBCell_AID Oth@ Aicda 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026746 none|mouse embryonic fibroblast InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026745 anti-Nelf-b (purified polyclonal)|mouse embryonic fibroblast Oth@ Nelfb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026526 Goat IgG isotype control|005-000-003|EB InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026525 Goat IgG isotype control|005-000-003|ESC InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026524 goat-anti-eGFP, raised against His-tagged full-length eGFP and affinity-purified with GST-tagged full-length eGFP|EB Oth@ GFP 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026512 TBP (Santa Cruz sc-204, LOT H0508)|RAW264.7 cells Oth@ Tbp 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026438 IgG|Adult(P56)_Cerebellum InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026437 IgG|PostNatal-Day15_Cerebellum InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026436 IgG|PostNatal-Day5_Cerebellum InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026435 IgG|PostNatal-Day0_Cerebellum InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026434 anti-H3K27me3|Adult(P56)_Cerebellum His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026433 anti-H3K27me3|PostNatal-Day15_Cerebellum His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026432 anti-H3K27me3|PostNatal-Day5_Cerebellum His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026431 anti-H3K27me3|PostNatal-Day0_Cerebellum His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026430 anti-H3K4me3|Adult(P56)_Cerebellum His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026429 anti-H3K4me3|PostNatal-Day15_Cerebellum His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026428 anti-H3K4me3|PostNatal-Day5_Cerebellum His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026427 anti-H3K4me3|PostNatal-Day0_Cerebellum His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026426 anti-RNAP-II|Adult(P56)_Cerebellum Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026425 anti-RNAP-II|PostNatal-Day15_Cerebellum Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026424 anti-RNAP-II|PostNatal-Day5_Cerebellum Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026423 anti-RNAP-II|PostNatal-Day0_Cerebellum Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026258 MyoD|F-3165|Embryonic stem cells Oth@ Myod1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026101 anti-H3|AB1791|myotubes His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX026100 anti-H3|AB1791|pro-B cell His@ H3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX025455 polyclonal rabbit IgG|Th2 cells, IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX025454 anti-H3KAc|Th2 cells, H3KAc His@ H3Kac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX024355 None|MDER cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX024354 H3K9me3|AB8898|MDER cells His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX024353 H3K4me3|AB8580|MDER cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX024352 H3K27me3|AB6002|MDER cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX023721 rabbit IgG|negative control|mouse B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX023718 ASH2|mouse B cells Oth@ Ash2l 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX023512 WDR5-FL|F3165|ES cell Oth@ Wdr5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX023511 Wdr5|A302-429A|ES cell Oth@ Wdr5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX023510 Rbbp5|not applicable|ES cell Oth@ Rbbp5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX023509 Oct4|sc8628|ES cell Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX023508 H3K4me3|17-614|ES cell His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022872 Rabbit IgG, Millipore, 12-371|IgG.s_5 InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022871 Histone H3 (tri methyl K4)|AB8580|H3K4me3.rep2.s_4 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022870 Histone H3 (tri methyl K4)|AB8580|H3K4me3.rep1.s_3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022869 Histone H3 (mono methyl K4)|AB8895|H3K4me1.rep2.s_2 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022868 Histone H3 (mono methyl K4)|AB8895|H3K4me1.rep1.s_1 His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022867 none|Atoh1.control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022866 ANTI-FLAG BioM2|F9291|Atoh1.rep2 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022865 ANTI-FLAG BioM2|F9291|Atoh1.rep1 Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022848 none|C2C12 myoblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022704 None|None|Embyonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022701 Med12|Bethyl A300-774A|Mouse embryonic fibroblasts Oth@ Med12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022689 Smc1|Bethyl A300-055A-1|Embyonic stem cells Oth@ Smc1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022688 Smc1|Bethyl A300-055A|Embyonic stem cells Oth@ Smc1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022494 Mouse embryonic day 11.5 (e11.5) heart Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022493 p300|mouse ES cells Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022492 CHD7|mouse ES cells Oth@ Chd7 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022484 P300 antibody (Santa Cruz, catalog# sc-585x, lot# c0509)|HL-1 cells Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022207 H3K4me3|07-474|Embryonic stem cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX022049 None|Mouse embryonic fibroblasts InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021985 ATRX H300 (Santa Cruz Biotechnology, batch G0105)|Mouse Embryonic Stem Cells Oth@ Atrx 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021894 none|Lymphoid cell InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021893 E2A.E12(V-18) (sc-349)|A12 (E2A-/- T cell) Oth@ Tcf3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021880 CTCF (07-729), DAM1421463|RAG1-/- pro-B cell Oth@ Ctcf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021879 FKHR (H-128) (sc-11350)|RAG1-/- pro-B cell Oth@ Foxo1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021878 EBF (H00001879-M01), 08344-1C2|RAG1-/- pro-B cell Oth@ Ebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021872 H3K4me1 (ab8895)|EBF-/- pre-pro-B cell His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021640 Normal Rabbit Serum<Upstate#12-370>|primary CD4+ T cells from spleen and lymph nodes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021428 N/A|Murine erythroleukemia (MEL) cells stably transfected with Gata-1 fused to ER InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021369 anti-V5 (Abcam, ab15828)|Day5 motor neurons Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX021357 RNA Pol II (Ser7 phospho CTD)|Embyonic stem cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020958 --|6hr_Input Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020957 --|240hr_Input Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020956 --|24hr_Input Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020955 --|0hr_Input Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020954 GR (Santa Cruz Biotechnologies, sc-1004; and Affinity BioReagents, PA1-511A)|Chromatin IP against GR Oth@ Nr3c1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020915 ESC Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020337 Phospho-STAT3(Ser727)|9134|in vitro polarized Th17 T cells Oth@ Stat3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020182 none, input|Input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020181 Pol II (8WG16)|sc-56767|PMWT_227 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020180 RXRa (D-20)|sc-553|RMWT_227 Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020179 RXRa (D-20)|sc-553|RMWT_315 Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020178 Pol II (8WG16)|sc-56767|PMWT_315 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020177 Pol II (8WG16)|sc-56767|PFWT_235 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020176 RXRa (D-20)|sc-553|RFWT_235 Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020175 RXRa (D-20)|sc-553|RFWT_234 Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020174 Pol II (8WG16)|sc-56767|PFWT_234 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020173 RXRa (D-20)|sc-553|RMKO_314 Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020172 Pol II (8WG16)|sc-56767|PMKO_314 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020171 Pol II (8WG16)|sc-56767|PMKO_225 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020170 RXRa (D-20)|sc-553|RMKO_225 Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020169 RXRa (D-20)|sc-553|RFKO_233 Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020168 Pol II (8WG16)|sc-56767|PFKO_233 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020167 RXRa (D-20)|sc-553|RFKO_232 Oth@ Rxra 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX020166 Pol II (8WG16)|sc-56767|PFKO_232 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019779 Streptavidin (NanoLink Streptavidin Magnetic Microspheres (Vendor: SoluLink, cat# M1002-010, lot# LM041609))|BirA RAW264.7 cells Oth@ Biotin 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019778 Biotin-tagged LXRb bound to NanoLink Streptavidin Magnetic Microspheres (Vendor: SoluLink, cat# M1002-010, lot# LM041609)|BirA/BLRP-LXRb RAW264.7 cells Oth@ Nr1h2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019774 H3K4me1 (Vendor: Abcam, cat# ab8895, lot# 721955)|PU.1-/- myloid cell His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019773 H3K4me1 (Vendor: Abcam, cat# ab8895, lot# 721955)|resting splenic B cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019772 H3K4me1 (Vendor: Abcam, cat# ab8895, lot# 721955)|thioglycollate-elicited peritoneal macrophages His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019619 anti-RNA Polymerase II (ab817; Abcam)|ES cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019618 anti-H3K4me3 (ab8580; Abcam)|ES cells His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019392 PPARG (81B1)|Call Signaling Technologies, Cat# 2443, Lot# 5/29/2007|3T3-L1 Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019391 PPARG (H-100)|SCBT, Cat# SC-7196X, Lot# A0380|3T3-L1 Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019362 None|None|3T3-L1, Whole Cell Extract (input control) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019361 H3K4me2|Embyonic stem cells His@ H3K4me2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019360 LSD1|Embyonic stem cells Oth@ Kdm1a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019359 IgG|Embyonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019139 H3K9Ace|3T3-L1 His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019138 H3K9Ace|primary macrophage His@ H3K9ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019137 C/EBPbeta|primary macrophage Oth@ Cebpb 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019136 PU.1|primary macrophage Oth@ Spi1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019135 PPARgamma|3T3-L1 Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019134 PPARgamma|primary macrophage Oth@ Pparg 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019017 none|cerebellum InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019016 none|differentiated 3T3-L1 cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019015 none|liver hepatocytes InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019014 Sirt1|cerebellum Oth@ Sirt1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019013 E2F4|differentiated 3T3-L1 cells Oth@ E2f4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019012 C/EBPalpha|differentiated 3T3-L1 cells Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019011 p300|differentiated 3T3-L1 cells Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019010 E2F4|liver hepatocytes Oth@ E2f4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019009 FOXA1|liver hepatocytes Oth@ Foxa1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019008 FOXA2|liver hepatocytes Oth@ Foxa2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019007 C/EBPalpha|liver hepatocytes Oth@ Cebpa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX019006 p300|liver hepatocytes Oth@ Ep300 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018930 anti-H3K4me3|Chromatin IP against H3K4me3 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018715 none|pre B-cells, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018714 anti-EBF1b|pre B-cells, ChIP Oth@ Ebf1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018672 none|Day3, seq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018671 none|Day2 pre-RA, seq InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018670 RAR sc-773|Day2+8hrs post-RA exposure, ChIP-seq Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018669 RAR sc-773|Day2 pre-RA, ChIP-seq Oth@ Rara 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018660 H3ac|mouse cardiomyocytes (HL1-cells) His@ H3ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018659 Srf|mouse cardiomyocytes (HL1-cells) Oth@ Srf 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018601 IgG|Retina, wt, IgG ChIP InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018509 none|embryonic fibroblast InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018111 anti-Gata3 (558686, BD bioscience)|Natural Killer T cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018110 anti-Gata3 (558686, BD bioscience)|Nave regulatory T cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018109 anti-Gata3 (558686, BD bioscience)|Inducible regulatory T cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018108 anti-Gata3 (558686, BD bioscience)|T-helper 17 cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018106 anti-Gata3 (558686, BD bioscience)|Unstimulated T-helper 2 cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018105 anti-Gata3 (558686, BD bioscience)|T-helper 1 cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018103 anti-Gata3 (558686, BD bioscience)|Nave CD4 cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX018101 anti-Gata3 (558686, BD bioscience)|Double negative cells Oth@ Gata3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017736 none|Primary bone marrow-derived macrophages (BMDM) from Fvb mice, untreated, input InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017735 RNA polymerase II CTD repeat YSPTSPS (phospho S5) Abcam (ab5131)|Primary bone marrow-derived macrophages (BMDM) from Fvb mice, 2hrs LPS, ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017734 RNA polymerase II CTD repeat YSPTSPS (phospho S5) Abcam (ab5131)|Primary bone marrow-derived macrophages (BMDM) from Fvb mice, untreated, ChIP Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017294 Whole Brain Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017108 KDM2A|Embryonic stem cells Oth@ Kdm2a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017084 H3K4me3 (AB8580 Abcam)|Whole Brain His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017083 CFP1 (Sc-25391 Santa Cruz)|Whole Brain Oth@ Cxxc1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017082 RNA Polymerase II (Unmodified - AB817 - Abcam)|Whole Brain Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017081 no antibody|mouse embryonic fibroblasts (MEF) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017060 Ctr9|V6.5 mES cells Oth@ Ctr9 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017059 Spt5|V6.5 mES cells Oth@ Supt5 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017058 NelfA|V6.5 mES cells Oth@ Nelfa 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017057 RNA Pol II (Ser2 phospho CTD)|V6.5 mES cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX017056 RNA Pol II (Ser5 phospho CTD)|V6.5 mES cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016862 anti-HA (12CA5) control. No HA epitope in untagged ES cells|Embryonic stem cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016848 H3K27me3 (Upstate/Millipore #07-449)|Embryonic stem cells His@ H3K27me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016836 anti-RNAPII_Ser5p (CTD4H8)|Neural progenitor cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016835 anti-H3K4me1|Neural progenitor cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016830 anti-RNAPII_Ser5p (CTD4H8)|Embryonic stem cells Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016829 anti-H3K4me1|Embryonic stem cells His@ H3K4me1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016347 Pol_II|primary bone marrow-derived macrophages Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016346 n/a (input_DNA)|primary bone marrow-derived macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016345 IgG|primary bone marrow-derived macrophages InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX016340 PCL2 (MTF2)|Undifferentiated mouse embryonic stem cells Oth@ Mtf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015833 none|Embryonic stem cells (total chromatin) InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015832 Jarid1a|Embryonic stem cells (chromatin IP fraction) Oth@ Kdm5a 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015831 Suz12|Embryonic stem cells (chromatin IP fraction) Oth@ Suz12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015830 Ezh2|Embryonic stem cells (chromatin IP fraction) Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015829 Jarid2|Embryonic stem cells (chromatin IP fraction) Oth@ Jarid2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015778 Jarid2|Embryonic Stem cells Oth@ Jarid2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015777 MTF2|Embryonic Stem cells Oth@ Mtf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015602 GIgG|B cells Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015601 GIgG|murine CD4+ T Unc@ Unclassified 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015600 IgG|B cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX015120 GATA-1|MEL86 erythroid cell line expressing metabolically biotinylated GATA-1 (MEL Bio-GATA-1) Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX014435 anti-H3K9Me3 antibody|embryonic stem cells, Eset shRNA His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX014434 anti-H3K9Me3 antibody|embryonic stem cells, control shRNA His@ H3K9me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX014433 rabbit polyclonal anti-Eset antibody|embryonic stem cells, unperturbed Oth@ Setdb1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX014430 WCE|V6.5 mES cells InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX013186 None|Chromatin input as control InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX013185 GATA1|Chromatin IP against GATA1 Oth@ Gata1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX012918 jmjd3|mouse bone marrow-derived macrophages Oth@ Kdm6b 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX012415 Flag M2|Embyonic stem cells Oth@ Epitope tags 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX003889 Rabbit control IgG InP@ Input control 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX003888 anti-Brg/Brm Clone J1 Oth@ Smarca4 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX003867 Sox2 Oth@ Sox2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX003866 Oct4 Oth@ Pou5f1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX003849 SUZ12 Oth@ Suz12 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX003848 RING1B Oth@ Rnf2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX003847 EZH2 Oth@ Ezh2 1 1 http://www.ncbi.nlm.nih.gov/sra?term=SRX003119 RNAP2 Pol@ RNA Polymerase II 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX383752 Foxp1 Oth@ Foxp1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245537 Anti Histone H3K4me3, Abcam, ab8587 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245536 Anti Histone H3K4me3, Abcam, ab8586 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245535 Anti Histone H3K4me3, Abcam, ab8585 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245534 Anti Histone H3K4me3, Abcam, ab8584 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245533 Anti Histone H3K4me3, Abcam, ab8583 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245532 Anti Histone H3K4me3, Abcam, ab8582 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245531 Anti H3K9,K14 acetyl, Millipore 06-606 His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245530 Anti H3K9,K14 acetyl, Millipore 06-605 His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245529 Anti H3K9,K14 acetyl, Millipore 06-604 His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245528 Anti H3K9,K14 acetyl, Millipore 06-603 His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245527 Anti Histone H3K4me3, Abcam, ab8581 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245526 Anti Histone H3K4me3, Abcam, ab8580 His@ H3K4me3 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245523 Anti H3K9,K14 acetyl, Millipore 06-602 His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245522 Anti H3K9,K14 acetyl, Millipore 06-601 His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245521 Anti H3K9,K14 acetyl, Millipore 06-600 His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX245520 Anti H3K9,K14 acetyl, Millipore 06-599 His@ H3K9K14ac 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX204071 Rad21 Oth@ Rad21 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX204070 FoxA1 Oth@ Foxa1 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX204069 Pol3 Pol@ RNA Polymerase III 1 1 http://www.ncbi.nlm.nih.gov/sra?term=ERX132833 Anti RNA Polymerase II. Abcam 8WG16 Pol@ RNA Polymerase II