ChIP-Atlas: Target genes

Potential target genes for MBD3

Query protein: MBD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1674505 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MBD3's Target genes

◢ MBD3: Average

◣ SRX1674505: HeLa

◢ SRX1674506: HeLa

◢ SRX1674507: HeLa

◢ SRX246860: MCF-7

◢ SRX1489433: MDA-MB-231

◢ SRX1489434: MDA-MB-231

◢ SRX246862: MDA-MB-231

◢ MBD3: STRING

RGPD1
RGPD2
MTRNR2L9
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MTRNR2L1
MTRNR2L10
EMILIN2
MTRNR2L6
MAMDC2
C1orf198
TMCO3
DCUN1D2
FRG2
RELA
CNOT3
DUX4
PXMP4
ZSWIM1
KXD1
YJU2
ZNF555
IFT46
EXOC4
C19orf53
GSN
CDKN1A
ERGIC3
DNAJB1
SIRT4
ERICH4
DMAC2
HUS1
ZNF77
TDRD7
BNIP1
USP16
FARSA
CALR
SNX8
C6orf89
USP54
USHBP1
BABAM1
HELZ2
POLR2J3
PSMD9
HPD
PHF20
NR1H2
FITM2
MAD1L1
SLC38A7
STAU1
DDX27
RAB14
INTS5
TCAF2
NOP53
C6orf226
UTP11
AHCY
POLR2J
FAM32A
DHODH
ZNF772
TIMM17A
ZNF226
ATP5MF-PTCD1
ATP5MF
WFDC3
DNTTIP1
AARS2
STARD10
NDUFB7
CYB561D1
CDON
IFT81
PPFIBP2
RGPD8
RGPD6
RGPD5
MEA1
MRPS17
CUL7
L3MBTL2
CUL9
FBF1
CHD8
BBS1
WDR36
PRDX3
TTC12
TOX4
RAB2B
NSUN4
ZBTB3
DDX41
DNAJC5
PIGO
ZNF169
TMEM97
EPN1
CBWD5
ZNF414
SMIM12
SLC25A44
C12orf43
ATAT1
SPAAR
DHX16
TBC1D13
SLC35A4
APBB3
PDCL
GBA
ZNF557
NDUFAF1
ZC3HC1
ITGB2
CIC
TSPAN19
LRRIQ1
CIT
BLOC1S5
RNF181
CACFD1
ZNF57
MORN4
MED16
C1orf210
ASB6
CTNNBL1
RPP21
LAMTOR4
HNRNPH1
ANAPC5
DAGLB
TPD52L2
ABHD16B
ZNF200
CCDC124
NBPF1
ASNSD1
ASDURF
CFAP54
CCDC107
TBC1D31
LRRC37A3
SEC14L5
IMPDH2
HMBS
TIMM50
PROCR
EIF2B2
GHDC
FAM98A
WDR59
TMEM161A
LRRC23
PDRG1
CATSPERG
KIAA1586
PMF1-BGLAP
PMF1
C2orf74
UQCC1
OXA1L
THOC3
IRF9
IFT52
RIN1
ZCCHC4
SLC35C2
PDCD2L
PFKFB4
L3MBTL1
FAM234B
AAR2
ZNF579
SPATA25
TTC30A
COA3
CNTD1
ZNF875
TP53BP1
TCTN2
CCDC130
SMDT1
LRGUK
SAR1B
COMMD2
RRP36
SMIM30
OTUB1
CDKAL1
SMN2
SMN1
BCAS4
PLPBP
PARP2
DAZAP2
CACNA1S
ASCL5
HSP90AB1
SH3BP5L
SERINC3
DHX40
TAF13
HINFP
C1orf74
SCRN2
PRMT5
OSGIN1
NAA40
GATAD2A
EIF3C
OSBPL9
ATG9B
ABCB8
ZNF585B
RRP15
PPP1R13L
POLR1G
NEU1
MYBPC2
GTPBP8
FAM200A
PROSER3
KAT7
HSPB6
COPZ1
COPS6
RBBP5
ALAD
STMN3
SLC36A1
SLC26A6
RTEL1
EZH1
ABCF3
VPS11
DNAJC18
ZSWIM3
RRP9
PARP3
ACOT8
SMYD3
SLC25A16
NECAP2
FLT3LG
ZBTB32
DNAH7
TTC1
MRPS10
VPS25
HM13
OS9
CDC23
ZNF416
RAD18
PTCD2
MRPS27
SEC14L1
MLST8
MICU2
TTPAL
TMEM205
MAD2L1BP
KNSTRN
CCDC159
PRR13
RABEPK
FAM227B
DTWD1
ZSCAN31
SNAPIN
POLDIP3
GLIPR1L1
CAPS2
RPS19
RPL26L1
KCTD7
BRF2
CLASRP
PEX19
C2orf42
FAM98C
NDUFA12
EEF1AKNMT
TOMM40L
RAG2
IFTAP
DUSP12
APOA2
SPRYD4
PCYOX1L
ECSIT
CLCF1
TMEM209
SSMEM1
ZMAT2
TM9SF4
PID1
TPP1
DIO1
DEPTOR
C15orf40
TSFM
RDM1
MAPK13
CFAP69
C7orf31
TTC26
NDUFA5
KDM8
GGCT
PDE4C
HLA-B
DUS3L
ZKSCAN4
WDR18
STAG3
NPEPL1
GPC2
ARMH3
PARS2
DEF6
GTF2IRD2
ZNF585A
SNX19
TRIT1
SEC24B
MRPL27
EME1
RAB11B
EIF3G
EID2B
ARL13B
CARD8
TMEM106C
THOC5
RAB8A
BIN3
MAMSTR
B3GNT3
ZNF397
ZFYVE19
UNKL
RBM23
DNAJC17
MED24
KIF3B
AZIN2
ACIN1
ZNF229
SAAL1
NPRL2
HEATR6
CYB561D2
SLC35F3
HIBCH
CCDC125
WDR70
TMEM101
SLC37A4
RASL11B
POC5
GALK2
DTD2
DIABLO
BNIP3L
KAZALD1
GSTO2
CBWD3
ALAS1
ZNF212
ZFYVE27
S100A13
EPB41
CHTOP
ZHX3
SPG21
SNAPC5
SLC35B1
SF3A3
RNF20
RALGDS
PCNA
CDS2
SYS1
SORD
RMDN3
PFDN2
NIT1
MRI1
MCM10
GLYCTK
LRWD1
HILPDA
ALKBH4
TK1
SPC25
MRPS24
LIMK1
KCTD2
ATP5PD
NDUFA8
MORN5
DYRK4
ZSCAN23
TBC1D23
PAM16
EXOC7
CLPB
ZC3H6
TSPAN31
MRPS14
AGAP2
ZDHHC13
TIMM10
SPON2
NDUFS8
CBWD6
FEZ2
CPLANE2
SUMF2
SLC39A3
LHPP
FBXO34
TMEM94
PRMT2
POLR3H
NUDC
MTRF1
BET1
POLM
RAB29
PPT1
DMAP1
CABYR
AP2M1
TXNRD1
SEL1L
DRG2
CHURC1-FNTB
CHURC1
CEP41
RPP40
MYH7B
GSS
TANGO6
SLC35F6
ADGRG1
ZNF235
SKIV2L
NELFE
NDUFS2
IL17RC
FNDC11
FIS1
CARS1
ADAMTS4
MCCC1
IFT22
GPSM3
EFNA4
BRIP1
ABT1
SRPRA
NOMO3
NOMO2
HSPA12A
FDPS
ENO4
DCTN3
CZIB
ZSCAN25
RABGGTA
OCEL1
EPG5
CYB5R3
BECN1
ZNF774
ZNF629
ZNF317
ZNF19
ZFP37
SNUPN
MKNK1
FKBP8
ZNF211
RPLP0
MRS2
ILVBL
GPAM
GOLGA7
ZNF334
ST6GALNAC4
PRKCSH
NDUFS7
CCDC151
ZFP1
MIS18BP1
ATP5F1A
ZNF222
ZDHHC24
KAT5
CCT2
ANAPC15
ACTN3
TNFAIP8L1
TMBIM4
KRR1
COX19
BUB3
PSMC3
POLR2E
PHC2
ZNF268
WDPCP
SMG8
SMARCAL1
MDH1
INTS4
DDX56
CCDC38
AMDHD1
ZNF792
ZNF138
TCTN3
LUC7L
FRAT1
FAM160A2
CNGA4
NRAS
ZNF17
DNAL1
DCAF8
CMAS
ZNF221
SEC61G
PEX16
LARGE2
AP1G2
TYK2
SEC61A2
PYROXD1
DCP1A
CEP20
TOX2
RARS1
PEX11G
MMACHC
MANBAL
LZTFL1
CCDC163
UTP6
UTP3
UBE4A
TAF6L
PIGC
NBEAL2
LMNA
IPO9
HIKESHI
ERCC4
CCDC12
CARD19
VPS8
SEC22A
PDCL3
ENTPD4
WARS2
RBM42
RBM27
PRRC2B
MRPL45
MOSPD3
ANXA8L1
SYTL2
SAP30BP
RECQL5
MED6
LMAN2
DBT
CALR3
C19orf44
SPC24
IFT27
TMX1
TMEM177
PDHB
NEURL2
GINS3
EPHB3
CTSA
ATG7
ARHGAP22
UBE2T
RTF2
GDPD1
TTI2
TRIQK
MKS1
CCDC57
ZNF91
ZNF701
ZNF546
STK36
SIPA1
SHKBP1
RNF25
POLR2C
MTMR14
LMTK2
HEATR1
DDX19B
C19orf33
UNK
TCEA2
SYCE3
SNRNP35
PAF1
NUBP1
IMPA1
IKZF4
DDX52
ACYP1
RAB3D
HMGCL
HDAC4
DNMT3B
DMAC1
VPS41
TPX2
SHQ1
NOLC1
CEP152
ATP5MC1
AP5S1
WDR54
TPCN2
SUCLA2
PRPF18
LTN1
CASP8
C2orf81
POLR2F
DHX8
CUTC
COX15
C22orf23
ZNF155
TUT1
MED30
MED20
MED1
FAM172A
EXOG
BYSL
TRIM21
LTBP1
CCDC61
C7orf50
ZNF789
ZNF563
SETX
REXO1
PLD3
NCEH1
MRPS36
CENPH
C19orf47
AARSD1
ZNF525
YTHDF2
PPP2R5D
PLEKHN1
ECHS1
CAPN7
ASXL1
ACTR5
ZNF776
SLC25A20
POLR1F
MRPS22
IP6K2
DDX47
ZNF311
ZNF134
ZDHHC12
SMUG1
PPOX
PODNL1
ERICH6
DLD
DCAF15
USP42
TCOF1
PXT1
PIKFYVE
PGAP2
NRXN2
NOMO1
MAN2B2
KCTD20
HIBADH
FNTB
FAM117B
CEP83
TSPAN4
RPAP1
PTCD1
PSEN2
POLR2L
NPHP1
NELFCD
HEATR5A
GFM1
ESYT2
CPSF4
COMMD5
CHAC1
CAMLG
TIMM13
POLR2J2
NOB1
MPHOSPH6
MAPKAP1
CHD6
RINT1
PRPF3
OR10AD1
HAUS5
FYCO1
DNTTIP2
MAPRE1
HAX1
C7orf26
ADCK5
SCAMP3
IFI35
EXOSC2
ARHGEF5
WBP1L
SNIP1
SMIM13
SLX1B
SLX1A
SDHC
NKIRAS2
MPZ
GTF3C3
ERV3-1-ZNF117
ERV3-1
DNALI1
BOLA2-SMG1P6
BOLA2B
BOLA2
AP1S1
ALG9
TATDN3
NSL1
DOLPP1
IL18R1
ALG14
TMEM54
SPAG1
LARS2
HS1BP3
ATP6V1FNB
ATP6V1F
TSNAXIP1
RANBP10
MALSU1
HLA-E
GTF2H4
COPS4
ZNF658
VAPB
SLC35B4
RPP25L
POLR1E
NEK10
HIF1AN
ESPL1
ATP5PO
YIPF4
SPTBN4
RNF114
NOL10
NMNAT3
GPN3
FBXO38
FAM216A
BLVRB
WWP2
TGDS
PSPN
MEAK7
CWC22
ALKBH7
TRIM16
TOMM7
TAF1C
SLC25A45
RBM28
PMPCB
OCIAD2
METTL2B
IQGAP3
FRMD8
CCZ1
CCDC34
ADAD2
USE1
ST3GAL4
SIDT2
SEC11C
MRPL52
EDEM2
ARMC9
ZFYVE21
XRCC3
RCBTB2
RAE1
PLA2G4A
FAM136A
DPP8
ATP9A
ZNF808
ZNF791
ZNF490
TAMM41
STXBP2
PCP2
MYDGF
IQCB1
GMNN
GET1-SH3BGR
GET1
FDX2
F2RL1
EAF2
ATP5MPL
ZCCHC10
TTLL4
SVBP
RSAD1
PTRHD1
OAZ2
MINDY3
ERMAP
COMMD1
CENPO
TPCN1
PAFAH2
NHEJ1
FANCC
DBR1
BCAR1
ARSB
PMS2
OPA3
GTF2IRD2B
CRELD1
AURKAIP1
ANKRD31
AIMP2
SDHB
REXO2
CDK5RAP2
ZNF442
PHKG2
PCYT2
ZKSCAN1
UCHL3
RNF34
NUP54
MTRR
METTL18
FASTKD3
FAM156A
CYB5R1
COMMD6
C1orf112
ZNF528
PCCB
KCTD18
GPX4
DDX50
ZNF709
ZNF415
TMEM67
THUMPD1
SGF29
PSTK
PLRG1
KIF3A
IKBKE
GTPBP3
BTN2A1
ANO8
ZBTB9
UBE2V2
PARP11
EXO1
CERS5
CDK5RAP3
BORCS7
ANKRD35
WDR74
WDR24
GPER1
DNAJC28
CCPG1
C15orf65
BSN
ZNF426
WWOX
UBE2C
TMEM222
SAE1
LDAH
DNAJB5
CRTC1
CHST12
CALU
ZNF549
TRIM34
PPP5C
PPP2R3B
VCPKMT
TRAPPC5
RBBP9
PSMD8
PIGU
MCEMP1
EDC3
CSDE1
CNKSR1
C11orf65
ZNF473
ZNF470
VRK3
TM2D1
OTUB2
MCM5
LRRC8E
DPM2
BRPF3
ASB8
USP19
STK4
PXYLP1
MRPS33
JMJD7-PLA2G4B
JMJD7
ANGEL2
SBNO2
MEN1
GINS4
CHCHD3
BTN3A1
VHLL
SMG5
RNF187
NEK2
GLMP
FBXO46
AOPEP
TRIM56
PAIP2
METTL27
KLHDC3
CCDC136
ARFGAP2
AP1M1
ABLIM3
ZNF713
ZNF649
ZNF24
ZNF205
XRCC1
SNRPE
PTER
PINLYP
ZNF493
ZNF23
VPS4B
PLCD1
FXN
EIF3F
DSN1
CLP1
ADK
SH2B3