ChIP-Atlas: Target genes

Potential target genes for MBD3

Query protein: MBD3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX1674505 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
MBD3's Target genes

◢ MBD3: Average

◣ SRX1674505: HeLa

◢ SRX1674506: HeLa

◢ SRX1674507: HeLa

◢ SRX246860: MCF-7

◢ SRX1489433: MDA-MB-231

◢ SRX1489434: MDA-MB-231

◢ SRX246862: MDA-MB-231

◢ MBD3: STRING

KIF5C
RGPD1
RGPD2
MTRNR2L9
MTRNR2L2
MSH3
DHFR
MTRNR2L8
MTRNR2L1
MTRNR2L10
EMILIN2
MTRNR2L6
DUX4
MAMDC2
C1orf198
PTPRN2
ADGRA1
ADAMTS9
MUC3A
RELA
TMCO3
DCUN1D2
H3Y2
FRG2C
FRG2
CNOT3
GAS8
PXMP4
ZSWIM1
SPATA25
NEURL2
CTSA
MRI1
C19orf53
KXD1
TAF12
YJU2
ZNF555
IFT46
ARCN1
EAPP
EXOC4
GSN
CDKN1A
ERGIC3
HSP90AB1
ZNF655
TECR
DNAJB1
SIRT4
ERICH4
DMAC2
HUS1
ZNF77
TDRD7
AFAP1
BNIP1
USP16
RWDD2B
FARSA
CALR
RAD23A
SNX8
C6orf89
MRPS10
GPSM1
CARD9
USP54
USHBP1
BABAM1
HELZ2
POLR2J3
PSMD9
HPD
SRMS
PHF20
POLD1
NR1H2
FITM2
MAD1L1
SLC35F6
POLR2E
GPX4
SLC38A7
STAU1
DDX27
PI4K2A
RAB14
INTS5
GANAB
TPD52L2
TCAF2
NOP53
C6orf226
UTP11
FHL3
AHCY
ITGB2
POLR2J
FAM32A
PKD1L3
DHODH
ZNF772
SRA1
SLC35A4
APBB3
THAP11
TIMM17A
LMOD1
ZNF226
DYNLRB1
DYNC2I1
ABLIM3
ZNF789
ATP5MF-PTCD1
ATP5MF
WFDC3
SH2B3
DNTTIP1
AARS2
STARD10
PYY
NAGS
NDUFB7
CYB561D1
CDON
IFT81
ANKRD35
PPFIBP2
RGPD8
RGPD6
RGPD5
RRP36
MEA1
KLHDC3
MRPS17
ASB2
MRPL2
KLC4
CUL7
SRF
L3MBTL2
CUL9
FBF1
CHD8
FOLR1
BBS1
PHRF1
WDR36
PRDX3
MOK
RTEL1
TTC12
SMDT1
PHETA2
NAGA
TOX4
RAB2B
NSUN4
ZBTB3
POLR2G
METTL27
DOK3
DDX41
DNAJC5
STOML2
PIGO
ZNF169
TMEM97
EPN1
CBWD5
ZNF414
SMIM12
SLC25A44
MRPS18B
C12orf43
ATAT1
SPAAR
HRCT1
DHX16
TBC1D13
C1orf159
VPS72
PIP5K1A
PDCL
GBA
ZNF557
NDUFAF1
ZC3HC1
CIC
TSPAN19
LRRIQ1
CIT
BLOC1S5
TMEM150A
RNF181
CACFD1
TPCN1
IQCD
ZNF57
NDUFA12
MORN4
MED16
C1orf210
ASB6
EEF1E1
HACL1
CTNNBL1
BTD
RPP21
MAP11
LAMTOR4
HNRNPH1
ANAPC5
CRTC1
DAGLB
ABHD16B
ZNF200
TMEM270
CCDC124
NUDT1
NBPF1
MRM2
KCTD5
CARS1
ASNSD1
ASDURF
CFAP54
SIT1
CCDC107
ARHGEF39
ANKRD60
SP6
TBC1D31
LRRC37A3
SEC14L5
NDUFAF3
IMPDH2
DALRD3
HMBS
AP5S1
TIMM50
PROCR
FOXL1
EIF2B2
ARL2
HCRT
GHDC
FAM98A
TOX2
WDR59
TMEM161A
LRRC23
ENO2
PDRG1
CATSPERG
ADAMTS8
KIAA1586
PMF1-BGLAP
PMF1
C2orf74
UQCC1
SCRN2
MRPL10
LRRC46
OXA1L
THOC3
IRF9
IFT52
RIN1
BRMS1
ZCCHC4
POLM
SLC35C2
PDCD2L
ALDH1B1
UCN2
TP53INP2
PFKFB4
L3MBTL1
FAM234B
AAR2
ZNF579
TTC30A
COA3
CNTD1
ZNF875
TP53BP1
TCTN2
PFDN1
PAQR8
CCDC130
LRGUK
SYNGAP1
SAR1B
PHF1
CUTA
COMMD2
SMIM30
LAMTOR1
ANAPC15
SIN3B
CLIP2
OTUB1
CDKAL1
SMN2
SMN1
GDPD1
CCDC151
BCAS4
PLPBP
PARP2
DBNDD2
DAZAP2
CACNA1S
ASCL5
SH3BP5L
SERINC3
PKIG
DHX40
TAF13
HINFP
C1orf74
SLC27A3
PRMT5
OSGIN1
NAA40
PIGC
C1orf105
GATAD2A
WDR74
STX5
EIF3C
OSBPL9
ATG9B
ADGRG1
ABCB8
ZNF585B
ZNF383
RRP15
PPP1R13L
POLR1G
NEU1
MYBPC2
GTPBP8
FAM200A
ZNF3
PROSER3
LIN37
KAT7
HSPB6
COPZ1
COPS6
RBBP5
POLE3
C9orf43
ALAD
STMN3
SLC36A1
SLC26A6
EZH1
CARD10
ABCF3
VPS11
DNAJC18
ZSWIM3
RRP9
RPLP0
PARP3
GCN1
ACOT8
SMYD3
SLC25A16
NECAP2
FLT3LG
ZBTB32
RPL27
IFI35
EVX1
DNAH7
DDX47
TTC1
PSAP
WNK4
VPS25
HM13
OS9
CDC23
ZNF416
ZIK1
RAD18
LAMA5
PTCD2
MRPS27
HMG20B
TCOF1
SEC14L1
PGP
MLST8
MICU2
CASKIN1
BRICD5
ACIN1
TTPAL
TMEM205
RSPH9
RAB3D
PLPPR2
MAD2L1BP
KNSTRN
GTPBP2
CCDC159
PRR13
PCBP2
RABEPK
FAM227B
DTWD1
ZSCAN31
SNAPIN
POLDIP3
LOXL2
GLIPR1L1
CAPS2
ART1
RPS19
RPL26L1
KCTD7
BRF2
MED11
CLASRP
PEX19
C2orf42
FAM98C
EEF1AKNMT
TOMM40L
RAG2
IFTAP
DUSP12
APOA2
SPRYD4
PCYOX1L
ECSIT
CNN1
CLCF1
TMEM209
SSMEM1
PPL
OXR1
ZMAT2
ZDHHC12
TM9SF4
PID1
HARS2
HARS1
TPP1
TAF10
PIP5KL1
DIO1
DEPTOR
C15orf40
TSFM
RDM1
MTHFSD
MAPK13
CFAP69
C7orf31
TTC26
RGL2
PFDN6
NDUFA5
KDM8
GGCT
CRTAM
PDE4C
SYNGR4
PRR22
HLA-B
DUS3L
ZKSCAN4
WDR18
STAG3
OPA3
NPEPL1
NKAPL
KANK2
HPS6
GPC2
GAL3ST4
ARMH3
PARS2
DEF6
GTF2IRD2
ZNF585A
SNX19
NPIPB15
TRIT1
SEC24B
MRPL27
EME1
RAB11B
P2RY11
MYBL2
EIF3G
ZNF331
PROS1
INTS1
EID2B
EID2
ARL13B
CARD8
TMEM106C
THOC5
RAB8A
BIN3
MAMSTR
B3GNT3
ZNF589
ZNF397
ZFYVE19
UNKL
RBM23
DNAJC17
THRA
MED24
KIF3B
AZIN2
ZNF229
ZMYND10
TMEM115
SAAL1
RASSF1
NPRL2
HEATR6
CYB561D2
SLC35F3
HIBCH
CCDC125
ZNF581
ZNF580
WDR70
TMEM101
PPM1N
NUP155
CCDC200
SLC37A4
RASL11B
POC5
GALK2
DTD2
DIABLO
BNIP3L
KAZALD1
GSTO2
CBWD3
ALAS1
ZNF212
ZFYVE27
SLC19A1
S100A13
S100A1
EPB41
CHTOP
ZHX3
SPG21
PDP2
FAM189B
ZWILCH
SNAPC5
SLC35B1
SF3A3
RPL4
RNF20
RIPOR1
RALGDS
PCNA
CDS2
WDR82
SYS1
SORD
RMDN3
PFDN2
NIT1
MCM10
GLYCTK
GCHFR
LRWD1
HILPDA
ALKBH4
TK1
SPC25
MRPS24
LIMK1
KCTD2
BSPRY
ATP5PD
NDUFA8
MORN5
DYRK4
ZSCAN23
TBC1D23
PAM16
EXOC7
CLPB
ZNF438
ZC3H6
VARS2
TSPAN31
TMCO2
MRPS14
MARCHF9
GTF2H4
CDK4
AGAP2
ZDHHC13
TIMM10
SPON2
SMTNL1
NDUFS8
CBWD6
FEZ2
CPLANE2
SUMF2
SLC39A3
LHPP
FBXO34
TMEM94
SNRPG
PRMT2
FAM136A
ZNF584
POLR3H
NUDC
NR0B2
MTRF1
GNA12
BET1
VAMP8
VAMP5
DUSP15
RAB29
PPT1
DMAP1
CABYR
AP2M1
TXNRD1
TLCD3B
SEL1L
DRG2
SLC44A2
CHURC1-FNTB
CHURC1
CEP41
RPP40
NEDD4
MYH7B
GSS
TANGO6
SH3D21
ZNF235
SKIV2L
NELFE
NDUFS2
IL17RC
FNDC11
FIS1
CLDN15
ADAMTS4
PBX2
MCCC1
IFT22
GPSM3
EFNA4
BRIP1
ABT1
SRPRA
RPP25L
PKLR
NOMO3
NOMO2
NDUFB8
LMNA
HSPA12A
HIF1AN
FDPS
ENO4
ELOF1
DCTN3
CZIB
ARID3C
ABCC6
ZSCAN25
TGM1
RABGGTA
PSME3
OCEL1
EPG5
CYB5R3
BECN1
ATP5MGL
ZNF774
ZNF629
ZNF317
ZNF19
ZFP37
SNUPN
SIRT7
PCYT2
MKNK1
FKBP8
ZNF211
RNF225
MRS2
ILVBL
GPAM
GOLGA7
ZNF334
ST6GALNAC4
PRKCSH
NDUFS7
ZFP1
MIS18BP1
ATP5F1A
ZNF222
ZDHHC24
RNASEH2C
KAT5
CCT2
ACTN3
TNFAIP8L1
TMBIM4
KRR1
HMX2
CYP2W1
COX19
BUB3
PSMC3
PHC2
ZNF268
WDPCP
TMED4
SMG8
SMARCAL1
MDH1
INTS4
DDX56
CCDC38
AMDHD1
ZNF792
ZNF138
TCTN3
LUC7L
GRAMD1C
FRAT1
FAM234A
FAM160A2
CNGA4
SRFBP1
NRAS
ZNF17
DNAL1
DCAF8
CMAS
CBX7
ZNF221
SEC61G
PEX16
LARGE2
C11orf94
AP1G2
TYK2
SEC61A2
PYROXD1
DCP1A
CEP20
TEX45
TESK2
TCIRG1
RARS1
PEX11G
MMACHC
MANBAL
LZTFL1
JRK
COX6A1
CCDC163
UTP6
UTP3
UBE4A
TCTEX1D4
TAF6L
PLK3
NBEAL2
IPO9
HIKESHI
ERCC4
CCDC12
CARD19
BTBD19
VPS8
SEC22A
PDCL3
ENTPD4
WARS2
RBM42
RBM27
PRRC2B
PCOLCE
MRPL45
MOSPD3
ANXA8L1
VPS9D1
SYTL2
SAP30BP
RGS14
RECQL5
MED6
LMAN2
DBT
CALR3
C19orf44
SPC24
IFT27
TREX1
TMX1
TMEM177
SHISA5
PDHB
GINS3
EPHB3
ATG7
ARHGAP22
UBE2T
RTF2
PPP1R12B
MRPL34
ABHD8
TTI2
TRIQK
PRR14
MKS1
FOXN3
FBRS
CCDC57
ZNF91
ZNF701
ZNF546
STK36
SIPA1
SHKBP1
RNF25
POLR2C
MTMR14
LMTK2
HEATR1
DDX19B
C19orf33
AARS1
ZC2HC1C
UNK
TCEA2
SYCE3
SNRNP35
SLC10A5
PAF1
NUBP1
IMPA1
IKZF4
H3-3B
FAM174C
DDX52
CIRBP
ACYP1
PPP2R5B
HMGCL
HDAC4
DNMT3B
DMAC1
ATG2A
VPS41
TPX2
SHQ1
NOLC1
CEP152
ATP5MC1
WDR54
TPCN2
SUCLA2
PRPF18
PPP6R1
LTN1
CASP8
C2orf81
POLR2F
KAT8
DHX8
CUTC
COX15
C22orf23
BCKDK
ZNF155
TUT1
MTA2
MED30
MED20
MED1
FAM172A
EXOG
BYSL
TRIM21
RTN2
LTBP1
VTI1B
TTC32
R3HCC1
CCDC61
C7orf50
ZNF563
SETX
REXO1
PLD3
NCEH1
MRPS36
CENPH
C19orf47
AARSD1
ZNF525
YTHDF2
PPP2R5D
PLEKHN1
PEX6
NOC2L
KLHL17
ECHS1
CCDC116
CAPN7
ASXL1
ACTR5
ZNF776
TSPAN4
SLC25A20
POLR2L
POLR1F
MRPS22
IP6K2
ZNF311
ZNF134
USP21
SMUG1
PPOX
PODNL1
ERICH6
DLD
DCAF15
USP42
PXT1
PIKFYVE
PGAP2
NRXN2
NOMO1
MAN2B2
KCTD20
HIBADH
FNTB
FAM117B
CEP83
RPAP1
PTCD1
PSEN2
NPHP1
NELFCD
MTLN
HEATR5A
GFM1
ESYT2
CPSF4
COMMD5
CHAC1
CAMLG
WWP2
TIMM13
POLR2J2
NOB1
MPHOSPH6
MAPKAP1
CHD6
AHNAK2
RINT1
PUS7
PRPF3
OR10AD1
HAUS5
FYCO1
DNTTIP2
ZNF611
MAPRE1
LOC112694756
HAX1
C7orf26
ADCK5
SCAMP3