ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018230 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◣ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

H3C15
H3C14
H2AC19
H2AC18
POLR2J3
H2AZ1
DNAJB14
FRG2C
COL23A1
FAM174C
H4C14
KMT2A
ENAH
H4C15
MORC3
B3GALT4
VPS52
RPS18
TLCD1
NEK8
H2BC21
H2AC21
H2AC20
H3-3A
IDI1
RRP36
MEA1
GH1
ZC3H10
RPL41
H2BC5
H1-4
SCRIB
AMDHD2
MORF4L1
VEZF1
RCOR3
ZNF34
RPL8
H2BC11
H2AC11
EGLN1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H4C2
H3C2
H2AC4
KLF12
COX20
C6orf226
SECISBP2
KIF27
CTNNB1
TARS3
KIAA2026
PPP3CB
HNRNPU
STUB1
JMJD8
PIP4K2B
VPS28
PRRC2B
CHD2
H1-2
DESI2
ABL2
POGZ
PYCR2
TRAPPC8
MMP24OS
MMP24-AS1-EDEM2
AKT3
TMEM230
HMGN1
RNASEK
C17orf49
NECAB3
MUC1
HMGN2
FBXL3
PRSS27
SNAPC5
NUDT4B
NUDT4
LMBR1
EPN1
DUX4
H4C1
H3C1
H1-1
ZBTB2
SYNRG
H4C11
TBC1D13
SRSF11
MEMO1
ZNF276
VPS9D1
RAB4A
ZNF398
SETD5
FAM118A
IBA57
GATAD2B
POLG2
H3C13
H2BC18
HIPK1
TNRC18
LOC100129484
ADARB1
PARP1
DEDD
AGK
ZNF581
ZNF580
TPTEP2-CSNK1E
NCOA7
ZNF513
GTPBP3
ANO8
H4C3
H1-6
PPP1CC
EYA4
EDC4
NOXA1
KMT2C
UBP1
CLK3
CUL1
PCDH9
NFKBIA
FRG2
QSOX1
PANK3
ATXN7L2
ID2
MAP3K21
EZH2
BRWD1
AKAP8
EIF2D
ZFAND6
ARHGAP35
AKT2
SUPT4H1
RABGAP1
HNRNPF
CDC42BPA
C15orf39
YBX1
ZBTB20
DNAJC9
RRNAD1
ISG20L2
CTNNA1
DRAP1
C11orf68
PDE4DIP
ACBD3
TTC5
RUFY2
PDCD2
TFAP4
SP3
HSPG2
TAF10
BHLHA9
BRAF
SP1
SVBP
ERMAP
FNBP1
MAN2C1
HYI
SPIN1
SSX2IP
MAP3K2
HECTD1
RAVER2
DYRK1B
H2BC12
H2AC12
CMTM7
SLC25A10
NUB1
B3GALNT2
STAU1
ULK3
GDPGP1
CIB1
RPL17-C18orf32
RPL17
C18orf32
FPGS
MSL3
PHF23
DVL2
DPY19L4
OTUD7B
VANGL2
PCBD2
SMIM19
SLC20A2
CCSAP
NAXE
NUCKS1
ZNF768
USP21
DPH7
RRM2
MKRN1
RNF11
COMMD3-BMI1
COMMD3
BMI1
ARHGEF11
JAK1
PRRT2
PAGR1
FAM199X
CCDC200
STMP1
SKIDA1
CCDC88A
GPR180
ASH1L
ITGB3BP
EFCAB7
ESR2
NCAM2
DSG2
FBXO11
CUL7
DONSON
NKIRAS1
DDX59
NR1D2
UBE2D2
TRABD
SCAMP3
OPN3
CHML
ZNF48
CIRBP
EPHX1
CIZ1
HIVEP1
AGO3
ARID3B
KANSL1L
RASA4B
UBE2J2
ADSS2
ZMYM4
EFCAB2
NOTCH1
LUC7L2
KANSL1
THAP11
NUTF2
CENPT
MSX2
SPOPL
SRCAP
LOC730183
SMYD2
MCL1
TBC1D10C
PPP1CA
UBE2M
CHMP2A
NR2C2
PHACTR2
SATB1
ATP11B
NFAT5
SMARCD2
UBA3
ARL6IP5
GALNT11
ZBTB18
URB2
TAF5L
REPIN1
GPAA1
EXOSC4
CDC42EP4
CBX1
WIZ
NCOA2
PABPN1
ZNF341
ADNP
TMEM150A
KMT5B
CHD1L
TP53BP2
PRKAB2
PEX7
PRKAG2
ITGB1
NPIPB9
SUMF2
H2BC7
H3C4
H2AC7
SLC22A23
ANKRD50
KDM3B
REV3L
STC2
H3C10
H2BC13
H2AC13
H2BC14
H2AC14
ANKRD54
SLAIN1
BACH1
PRPF40B
NT5C2
SPRY2
SEC31A
OAZ1
RAD54L2
USF3
SCRN1
WDR48
SCN11A
RWDD3
LRRC37A3
CHAF1B
MKRN2OS
MKRN2
MSI2
ZNF70
VPREB3
ATXN2
UNC5A
USP12
TATDN2
C7orf26
LPGAT1
THAP12
GVQW3
ANKRD36C
PACS1
HOXA3
UGT1A3
EPS15
CASC3
ATXN7
DISC1
TBXAS1
HIPK2
PHYKPL
TLK1
SYT14
ZNF862
MTF2
SAMD1
LRRFIP2
C19orf67
SOD2
ZNF445
PPP4R2
THRB
SLC35D1
DHX9
ANP32B
TACC1
NRAS
C21orf91
ZNF213
HSPE1-MOB4
HSPE1
HSPD1
ZBTB37
DENND4B
UBA2
TIGD1
EIF4E2
GAREM1
JAGN1
MRPL40
HIRA
TMEM68
TGS1
AP1S2
UFSP1
ACHE
ABCB10
GPC4
DBN1
INPP5E
GLRX2
TXLNA
FAM53C
CDC25C
H1-7
DIDO1
GCLC
MAZ
ATXN2L
LPAR3
ARHGAP4
RBX1
H2BC15
H2AC15
BMP2K
ANKRD28
TRAM2
RILPL1
MIER1
RBBP8
STX18
PBX3
DSTYK
DENND2B
HPRT1
TRDMT1
KCNN1
C18orf21
FNDC3A
SDCCAG8
CEP170
SULT1B1
PPFIA4
DNAJB12
EPM2A
B4GALT6
SLC27A4
TRIM24
DYNLL2
NPIPB6
PHF21B
ACBD6
RPEL1
USP34
DEGS1
MPP5
MIB1
PTMA
LAMC1
SESN1
POMZP3
NBPF15
ZNF652
PRR7
HMGB1
STAG1
KEAP1
B4GALT1
NBPF1
PHIP
PIAS1
FHOD3
C15orf61
HECTD4
PIK3R1
SNAP47
KANSL3
FER1L5
MPC2
DCAF6
CMTM3
TGIF2-RAB5IF
TGIF2
APBB2
TM2D3
ZMYND11
CDC42
STARD4
GREB1L
ZNF76
SETD6
SRRM3
RNF220
CYREN
PHC1
H2AZ2
TLN1
CREB3
BCAP29
PURA
UBE2V1
MAX
GCN1
N4BP3
PITRM1
MID2
KCNB2
PFN2
PRKRA
PJVK
ZBTB17
FAH
RAD23A
UBE2Z
LATS1
EXOC2
ARHGAP10
PNRC1
GALNT2
IGF1R
UNK
RFK
NOTCH2
SQSTM1
MGAT4B
SGPL1
PKP4
CCDC148
ERICH2
TCAF1
ARFGAP2
ARHGEF12
H4C4
H2BC6
MYBL1
PXK
RC3H2
PSEN2
TPGS2
ZBTB44
KRBA2
H4C5
SLC39A4
CPSF1
SRSF4
ZNF740
CSAD
ZNF865
RFX1
WDR37
BTBD1
CD276
IQSEC1
RCN2
ERMARD
PSTK
DYNC1LI2
PCBP2
SMIM13
ZBTB38
CAPN7
PAFAH1B2
WDR17
HOXB9
RBM15
DDHD1
ACP4
ZFYVE9
BPTF
ARL8B
WRNIP1
MYLK4
STON2
RALB
PGBD5
SERTAD2
ADPGK
RNF138
DNAJC6
DTD1
COG2
E2F3
SBF2
ATXN7L3
TAB2
ATF1
SPACA6
LMO7
IMPACT
RYR2
ZNF697
TSC1
GFI1B
PEX3
ADAT2
TARBP1
ANKRD18B
CREBRF
SRD5A3
DSP
FBXO30
TBC1D5
NOVA1
SOWAHC
SEPTIN10
BHLHE40
TRIM3
SPTAN1
PTPN14
RALGAPA1
FOXD3
C17orf75
DNAH14
STUM
JUP
SYNCRIP
FNBP1L
CRIM1
THEM4
RABGGTA
PTPN4
SLC2A11
HLCS
KMT2E
EBAG9
GPRIN1
HOXD8
BPHL
RASA4
TMEM132A
KAT6A
RNF38
GPBP1
STRN
ZMAT1
PTPRU
PRRC2A
AIF1
LIX1L
SEC22C
NKTR
IQGAP1
CNOT8
ATP1B1
PHF10
PAQR3
TLE1
DCAF1
FAM131A
FAM207A
NME4
DECR2
CLN5
SRR
SMG6
SDC4
CRTAP
DYNC1LI1
FBXL4
TMEM223
TMEM179B
POLG
EPB41
RANBP17
SRF
CNIH1
UBE2N
CCDC92B
ROM1
EML3
TRIM44
FAM3C
PARP16
CDC73
ARSG
ASPSCR1
ERO1A
SLC16A6
CCR10
RXYLT1
B4GALT7
RNF139
LSS
NEK7
YPEL1
LHX4
CDK13
GET4
TSPAN10
NPLOC4
PATJ
RBM26
RNF135
PRKCQ
CEP68
KCNH1
SMARCB1
ZKSCAN2
GATA2
OTX1
LRIG2
NEMP2
TTC21B
INSIG1
SLC17A5
DCBLD1
SRXN1
FN1
USP33
ATRAID
RMND1
ARMT1
SLC5A6
RUVBL1
EEFSEC
GAA
C1orf53
MSRB2
HDLBP
TAOK1
VDAC3
RMDN2
CSRNP2
GOLGA1
SLC44A1
PTEN
KLLN
ZNF644
DGKH
BRPF1
UBE2L3
RIMBP3C
RIMBP3B
ATF3
MRPL38
VPS4A
KRAS
ACTN2
SLC44A3
MAP2K7
CEP85L
FZD1
ID3
RPL6
PTPN11
DNAJC25-GNG10
DNAJC25
FBXW2
CDC5L
ANKRD36
PAFAH1B1
KLHL25
PLEKHF2
SENP8
MYO9A
ARSB
SUSD5
H2BC4
H2AC6
MTHFS
WDR27
C6orf120
XYLB
HES1
PHGDH
COA6
UIMC1
RMC1
LYST
OAT
RASAL2
RAPH1
LRRC8A
KYAT1
MECP2
OSBPL6
RBSN
MAPK8IP3
PNMA1
NCBP3
TYMP
SCO2
DNAJB2
AKAP13
LARP4B
BRPF3
CHRNA5
C3orf80
KLF9
THAP9
TTC23
LRRC28
C8G
FBXW5
CPOX
CLASP2
RAB43
AMDHD1
KAT8
ING5
COX5A
TBC1D14
SPTSSA
AHCYL1
EIF4G1
COL6A1
LBR
GTF2H2
NT5DC1
ZNF609
ZC3H4
SLC6A9
TMEM250
TTLL11
CXADR
ACADM
EDEM1
NOL7
LMNB1
LRP11
SURF6
COPS7B
AK1
PDE6D
DOCK7
ZBTB10
HOOK1
ATP2A2
SSBP2
ACVR1C
PGBD1
MAIP1
RCBTB1
PYGL
RNF214
PCSK7
POGLUT3
DTX2
ABI2
RGMA
RCOR2
IGSF3
MMAA
TMCC1
PYGO2
LOC101928120
TXNRD2
COMT
PKM
MNX1
HNRNPA3
DUSP14
JARID2
CDC7
SCAF8
YPEL3
TBX6
GNB2
TTYH2
ASXL1
H2BU1
H2AW
NPTN
ACTR1B
LYPLA1
SLC48A1
GPX1
METTL9
FOXP1
OVCA2
MLLT1
KIAA1522
TASOR2
STK40
ARRDC3
RCAN3
KIF13A
ROCK2
PSKH1
TVP23B
FGGY
SYNE2
GMNN
UAP1L1
SIRT7
NOXO1
GFER
TIRAP
WDTC1
PKN3
TTC7A
MCFD2
MYOZ3
RHEB
DENND10
SYN3
GALNT1
RRP1B
HSF2BP
SIK2
PLEKHO2
LNPEP
RPL7
RDH10
GDI1
TIGD3
LAMTOR3
TRAF4
NOM1
IKZF4
DCUN1D4
C16orf87
HDAC1
INTS12
GSTCD
CBX4
FASN
EXOSC6
JMJD4
ZNF148
VPS36
CKAP2
MFSD3
GPT
TLCD4-RWDD3
TLCD4
RNF19A
SEMA4B
RASL10B
MAPKAP1
SEMA7A
CNN3
E2F8
ASAP3
UNC119
MCOLN2
C12orf75
SNX17
EIF2B4
EPB41L2
PDCD5
CHID1
AMOTL1
EIF4ENIF1
ABTB1
GGA2
SLC25A42
LRP6
THAP3
SPATA1
GNG5
TERF2
DIP2B
NECTIN3
LEPR
LEPROT
ERBIN
FOXG1
SCAI
MRPL48
HNRNPL
PHF19
MRPS24
NIT2
INO80
GZF1
GTF2IRD2B
GTF2IRD2
SCAP
ZER1
FRA10AC1
IDH2
TKT
ERO1B
HSPBP1
BRSK1
PPP4R3A
HHIPL1
CCDC85C
IKBKB
BRI3
ST3GAL3
DCAF10
MRTFB
ZFX
UBXN2A
KIAA0232
TTC21A
GORASP1
SRRM2
PRRG4
HOXB4
HOXB3
RAB23
AGBL3
NR4A3
ZMIZ2
RCE1
SLC24A1
MAN1A2
ZNF787
TGFBR2
ZBTB21
DNAI4
LRP12
UBIAD1
SNUPN
ODC1
PIN4
DHRS11
ATAT1
SLC39A13