ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX8018230 | 293
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◣ SRX8018230: 293

◢ SRX8018231: 293

◢ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

H4C14
H3C15
H3C14
H2AC19
H2AC18
H4C15
DUX4
POLR2J3
H2AZ1
DNAJB14
FRG2C
COL23A1
CIRBP
FAM174C
EFNA2
KMT2A
ENAH
MORC3
VPS52
RPS18
B3GALT4
TLCD1
RPL23A
RAB34
NEK8
H2BC21
H2AC21
H2AC20
H3-3A
IRF2BP2
WDR37
IDI1
RRP36
MEA1
CTDSP1
GH1
CSHL1
ZC3H10
RPL41
ESYT1
H2BC5
H1-4
SCRIB
ATP6V0C
AMDHD2
MORF4L1
VEZF1
RCOR3
ZNF34
RPL8
H4C9
H2BC11
H2AC11
EGLN1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
H4C2
H3C2
H2AC4
H4C1
KLF12
COX20
C6orf226
SECISBP2
CKS2
KIF27
CTNNB1
MAMDC2
TARS3
RANBP6
KIAA2026
PPP3CB
HNRNPU
RHBDL1
WDR24
STUB1
JMJD8
PIP4K2B
VPS28
PRRC2B
CHD2
H3C3
H1-2
DESI2
ABL2
POGZ
PYCR2
TRAPPC8
MMP24OS
MMP24-AS1-EDEM2
EIF6
AKT3
TMEM230
PCNA
HMGN1
RNASEK
C17orf49
BCL6B
NECAB3
ACTL10
MUC1
HMGN2
FBXL3
PRSS27
ZWILCH
SNAPC5
RPL4
NUDT4B
NUDT4
LMBR1
EPN1
H3C1
H1-1
ZBTB2
SYNRG
H4C12
H4C11
H2BC14
H2AC14
TBC1D13
SRSF11
MEMO1
ZNF276
VPS9D1
RAB4A
ZNF398
SETD5
FAM118A
IBA57
GATAD2B
POLG2
DDX5
CEP95
H3C13
H2BC18
HIPK1
TNRC18
LOC100129484
ADARB1
PARP1
DEDD
AGK
ZNF581
ZNF580
CCDC106
TPTEP2-CSNK1E
NCOA7
RPS5
ZNF513
SNX17
EIF2B4
GTPBP3
ANO8
H4C3
H1-6
PPP1CC
EYA4
EDC4
NOXA1
KMT2C
UBP1
CLK3
CUL1
PCDH9
NFKBIA
FRG2
QSOX1
PANK3
CYB561D1
ATXN7L2
ID2
MAP3K21
EZH2
BRWD1
AKAP8
EIF2D
ZFAND6
ARHGAP35
AP2S1
AKT2
SUPT4H1
ZBTB26
RABGAP1
HNRNPF
CDC42BPA
C15orf39
FAM177A1
YBX1
ZBTB20
MRPS16
DNAJC9
RAD54L
RRNAD1
ISG20L2
CTNNA1
DRAP1
C11orf68
PDE4DIP
ACBD3
TTC5
RUFY2
PDCD2
TFAP4
SP3
HSPG2
TAF10
RRP8
ILK
TPP1
BHLHA9
BRAF
SP1
SVBP
ERMAP
FNBP1
MAN2C1
HYI
SPIN1
SSX2IP
MAP3K2
HECTD1
EDARADD
RAVER2
DYRK1B
H2BC12
H2AC12
CMTM7
SLC25A10
MRPL12
NUB1
B3GALNT2
STAU1
ULK3
GDPGP1
CIB1
RPL17-C18orf32
RPL17
C18orf32
FPGS
MSL3
PHF23
GABARAP
DVL2
DPY19L4
OTUD7B
TFAP2A
VANGL2
PCBD2
SMIM19
SLC20A2
CCSAP
NAXE
GPATCH4
NUCKS1
ZNF768
ZNF747
USP21
UFC1
PPOX
DPH7
RRM2
MKRN1
RNF11
COMMD3-BMI1
COMMD3
BMI1
ARHGEF11
JAK1
PRRT2
MAZ
PAGR1
MVP
SLC25A53
FAM199X
CCDC200
STMP1
SKIDA1
MLLT10
CCDC88A
TGDS
GPR180
ASH1L
ITGB3BP
EFCAB7
LEKR1
ESR2
NCAM2
DSG2
FBXO11
MRPL2
KLC4
CUL7
DONSON
NKIRAS1
DDX59
NR1D2
UBE2D2
TRABD
SCAMP3
FAM189B
ZNF48
OPN3
CHML
EPHX1
CIZ1
HIVEP1
AGO3
ARID3B
KANSL1L
RASA4B
UBE2J2
SCNN1D
CATSPERE
ADSS2
ZMYM4
EFCAB2
NOTCH1
LUC7L2
KANSL1
THAP11
NUTF2
CENPT
MSX2
SPOPL
SRCAP
LOC730183
SMYD2
RAD9A
PPP1CA
MCL1
TBC1D10C
UBE2M
CHMP2A
NR2C2
PHACTR2
SATB1
ATP11B
NFAT5
SMARCD2
UBA3
ARL6IP5
GALNT11
ZBTB18
URB2
TAF5L
REPIN1
GPAA1
EXOSC4
CDC42EP4
SNX11
CBX1
WIZ
NCOA2
PABPN1
HDHD5
ZNF341
ADNP
USP39
TMEM150A
RNF181
C2orf68
KMT5B
CHD1L
TP53BP2
PRKAB2
PEX7
PRKAG2
ITGB1
NPIPB9
SUMF2
H4C5
H3C4
H2BC7
H2AC7
H4C4
SLC22A23
ANKRD50
CLCN5
KDM3B
REV3L
STC2
H3C10
H2BC13
H2AC13
EIF3L
ANKRD54
SLAIN1
BACH1
PRPF40B
NT5C2
SPRY2
THAP9
SEC31A
PEAK3
OAZ1
RAD54L2
USF3
SCRN1
WDR48
SCN11A
PHF19
RWDD3
LRRC37A3
CHAF1B
MKRN2OS
MKRN2
MSI2
ZNF70
VPREB3
ATXN2
UNC5A
USP12
TATDN2
C7orf26
LPGAT1
THAP12
GVQW3
ANKRD36C
HOXA3
PACS1
UGT1A4
UGT1A3
EPS15
CASC3
ATXN7
KCNIP2
DISC1
TBXAS1
HIPK2
PHYKPL
TLK1
SYT14
ZNF862
MTF2
SAMD1
C19orf67
LRRFIP2
DNAJC6
SOD2
ZNF445
PPP4R2
THRB
SLC35D1
DHX9
ANP32B
TACC1
NRAS
C21orf91
ZNF213
HSPE1-MOB4
HSPE1
HSPD1
ZBTB37
DENND4B
ARL4D
UBA2
TIGD1
EIF4E2
GAREM1
ZNF397
JAGN1
MRPL40
HIRA
TMEM68
TGS1
AP1S2
UFSP1
ACHE
ABCB10
GPC4
DBN1
INPP5E
GLRX2
TXLNA
FAM53C
CDC25C
H1-7
DIDO1
GCLC
ATXN2L
LPAR3
NAA10
ARHGAP4
RBX1
H2BC15
H2AC15
BMP2K
ANKRD28
TRAM2
RILPL1
MIER1
DNAI4
TUBB2A
RBBP8
STX18
PBX3
DSTYK
DENND2B
HPRT1
TRDMT1
KCNN1
C18orf21
FNDC3A
SDCCAG8
CEP170
SULT1B1
PPFIA4
DNAJB12
EPM2A
B4GALT6
SLC27A4
TRIM24
DYNLL2
NPIPB6
PHF21B
PTMA
ACBD6
RPEL1
PLPPR3
USP34
DEGS1
MPP5
MIB1
LAMC1
SESN1
POMZP3
NBPF15
ZNF652
PRR7
HMGB1
STAG1
KEAP1
B4GALT1
NBPF1
PHIP
PIAS1
FHOD3
C15orf61
HECTD4
PIK3R1
SNAP47
JMJD4
KANSL3
FER1L5
MPC2
DCAF6
CMTM3
TGIF2-RAB5IF
TGIF2
APBB2
DNAJC25-GNG10
DNAJC25
TM2D3
ZMYND11
CDC42
STARD4
GREB1L
ZNF76
SETD6
SRRM3
RNF220
CYREN
PHC1
H2AZ2
TLN1
CREB3
BCAP29
PURA
INTS9
HMBOX1
UBE2V1
MAX
RPLP0
GCN1
N4BP3
PITRM1
MID2
KCNB2
PFN2
PRKRA
PJVK
ZBTB17
FAH
RAD23A
CALR
UBE2Z
LATS1
EXOC2
ARHGAP10
PNRC1
UNK
H3-3B
GALNT2
IGF1R
RFK
NOTCH2
SQSTM1
MGAT4B
SGPL1
PKP4
CCDC148
ERICH2
TCAF1
PACSIN3
ARFGAP2
ARHGEF12
H2BC6
MYBL1
PXK
ZBTB6
RC3H2
NEU1
PSEN2
TPGS2
ZBTB44
RPL26
KRBA2
SLC39A4
CPSF1
SRSF4
ZNF740
CSAD
ZNF865
ZNF524
FIZ1
RFX1
BTBD1
CD276
IQSEC1
RCN2
ERMARD
PSTK
DYNC1LI2
PCBP2
SMIM13
ZBTB38
CAPN7
PAFAH1B2
WDR17
HOXB9
RBM15
DDHD1
C19orf48
LOC105372440
ACP4
ZFYVE9
RALB
BPTF
ARL8B
WRNIP1
MYLK4
STON2
PGBD5
SERTAD2
ADPGK
RNF138
DTD1
COG2
E2F3
SBF2
ATXN7L3
TAB2
ATF1
SPACA6
AFAP1
LMO7
IMPACT
RYR2
ZNF697
TSC1
GFI1B
PEX3
ADAT2
TARBP1
ANKRD18B
CREBRF
SRD5A3
DSP
FBXO30
TBC1D5
NOVA1
SOWAHC
SEPTIN10
FOXD3
BHLHE40
TRIM3
TIMM10B
SPTAN1
PTPN14
RALGAPA1
ZNF207
C17orf75
DNAH14
STUM
JUP
SYNCRIP
FNBP1L
PLD4
CRIM1
THEM4
TGM1
RABGGTA
PTPN4
SLC2A11
HLCS
KMT2E
EBAG9
GPRIN1
HOXD9
HOXD8
BPHL
RASA4
TMEM132A
KAT6A
RNF38
GPBP1
MNX1
STRN
ZMAT1
PTPRU
PRRC2A
AIF1
POLR3GL
LIX1L
ANKRD34A
SS18L2
SEC22C
NKTR
IQGAP1
FAXDC2
CNOT8
ATP1B1
PHF10
PAQR3
TLE1
DCAF1
FAM131A
FAM207A
NME4
DECR2
CLN5
SRR
SMG6
SDC4
CRTAP
DYNC1LI1
FBXL4
SRF
TMEM223
TMEM179B
POLG
EPB41
RANBP17
CNIH1
CCDC92B
UBE2N
ROM1
EML3
B3GAT3
PARP16
TRIM44
FAM3C
CDC73
ARSG
ASPSCR1
ERO1A
SLC16A6
DDX23
CNTNAP1
CCR10
RXYLT1
TMED9
B4GALT7
RNF139
LSS
NEK7
YPEL1
LHX4
CDK13
GET4
TSPAN10
NPLOC4
PATJ
RBM26
RNF135
PRKCQ
CEP68
KCNH1
SMARCB1
ZKSCAN2
GATA2
OTX1
LRIG2
SLC5A6
CAD
ATRAID
NEMP2
TTC21B
INSIG1
SLC17A5
DCBLD1
SRXN1
FN1
USP33
UTRN
RMND1
ARMT1
RUVBL1
EEFSEC
GAA
LHX9
C1orf53
MSRB2
HDLBP
TAOK1
VDAC3
RMDN2
CSRNP2
GOLGA1
ATF3
MAPK11
SLC44A1
PTEN
KLLN
ZNF644
DGKH
BRPF1
UBE2L3
RIMBP3C
RIMBP3B
TRIM65
MRPL38
VPS4A
KRAS
ACTN2
SLC44A3
MAP2K7
CEP85L
FZD1
ID3
RPL6
PTPN11
FBXW2
CDC5L
ANKRD36
PAFAH1B1
GOLGA6L10
KLHL25
PLEKHF2
SENP8
MYO9A
ARSB
SUSD5
H2BC4
H2AC6
MTHFS
WDR27
C6orf120
OAT
XYLB
HES1
PHGDH
COA6
UIMC1
RMC1
LYST
RASAL2
RAPH1
LRRC8A
KYAT1
MECP2
OSBPL6
RBSN
MAPK8IP3
PNMA1
NCBP3
TYMP
SCO2
ODF3B
DNAJB2
AKAP13
LARP4B
BRPF3
CHRNA5
C3orf80
KLF9
TTC23
LRRC28
LCN12
FBXW5
C8G
CPOX
CLASP2
RAB43
CCDC38
AMDHD1
KAT8
BCKDK
ING5
COX5A
TBC1D14
SPTSSA
AHCYL1
EIF4G1
COL6A1
RPL27A
TMEM250
LBR
GTF2H2
NT5DC1
ZNF609
ZC3H4
SLC6A9
TTLL11
CXADR
ACADM
EDEM1
NOL7
LMNB1
GOLGA6L4
LRP11
PSG5
SURF6
PDE6D
COPS7B
AK1
DOCK7
ZBTB10
HOOK1
ATP2A2
SSBP2
ACVR1C
PGBD1
MAIP1
RCBTB1
PYGL
EAPP
MACROD1
RNF214
PCSK7
POGLUT3
DTX2
ABI2
RGMA
RCOR2
IGSF3
MMAA
TMCC1
SHC1
PYGO2
PBXIP1
LOC101928120
TXNRD2
COMT
PKM
KCNF1
HNRNPA3
DUSP14
JARID2
CDC7
SCAF8
YPEL3
TBX6
GNB2
TTYH2
RPL38
ASXL1
H2BU1
H2AW
NPTN
ACTR1B
LYPLA1
SLC48A1
GPX1
METTL9
FOXP1
OVCA2
MLLT1
KIAA1522
TASOR2
STK40
ARRDC3
RCAN3
KIF13A
ROCK2
PSKH1
NRN1L
TVP23B
UAP1L1
MAN1B1
SAPCD2
FGGY
SYNE2
GMNN
SIRT7
PCYT2
MAFG
NOXO1
SYNGR3