ChIP-Atlas: Target genes

Potential target genes for CDK12

Query protein: CDK12
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5975305 | 143B
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
CDK12's Target genes

◢ CDK12: Average

◢ SRX5975300: 143B

◣ SRX5975305: 143B

◢ SRX1144285: Jurkat

◢ SRX5975310: MG-63

◢ SRX5975315: MG-63

◢ SRX728789: THP-1

◢ SRX728790: THP-1

◢ CDK12: STRING

RGPD2
RGPD1
MTRNR2L2
MTRNR2L8
MRPL21
IGHMBP2
MTRNR2L9
RTEL1
ZBTB45
SUGCT
MPLKIP
CCDC97
DPY19L4
TBC1D19
ACSF3
WDR74
USP30
NME1
ZMPSTE24
STX16
AAR2
EIF1AD
BANF1
MTBP
MRPL13
UBE3B
KCTD10
CSTF2T
ZDHHC6
VTI1A
RAD54L2
ZNF276
VPS9D1
OTUD7B
MAN2C1
GOLGA3
GTF2H2C
GTF2H2C_2
CCDC57
STX18
PEMT
ZNF408
ARHGAP1
MAIP1
DUS1L
RTTN
BMS1
TARS2
FEM1B
EIF3F
ISY1-RAB43
ISY1
MED23
WDR83OS
WDR83
REXO4
GTF2H2
NR1H3
ACP2
SUPT7L
SLC4A1AP
ITGB3BP
EFCAB7
SLC35A3
RNF6
DCP1A
GTF3C5
MRPL44
BBS1
B4GALT7
FRA10AC1
SEC13
NUDCD3
CHCHD2
VPS13B
SLC33A1
IPO4
SMG8
EDC4
SNX16
GEMIN7
NOL12
ZNF561
ZNF165
ALKBH3
SLC24A1
NDUFS7
NDUFS3
KBTBD4
TMEM41A
DCAF10
WDR24
ADPRHL1
COPS7B
TACO1
PSMG3
NDUFB3
FAM126B
UBA5
ACAD11
HUS1
VPS52
RPS18
NR1H2
MLEC
CGGBP1
C3orf38
CCAR2
RFXANK
BORCS8-MEF2B
BORCS8
INTS12
GSTCD
HEMK1
USPL1
HMGB1
MRPL48
DMAP1
TTC4
SCAND1
NOL8
CENPP
CDK5RAP1
MRPL1
ALG10B
NOXA1
COX16
ZNF770
WDR11
HDAC8
MRPS31
INO80B
ZSCAN22
RRP15
PHB2
EXD2
STOML2
COMMD2
PSMF1
TEDC1
TOP3B
RBBP5
AURKAIP1
NOP16
HIGD2A
TRIP4
SENP1
PFKM
ANTKMT
PIH1D2
NKAPD1
MRPS18C
HELQ
NMNAT1
LZIC
MRPL40
HIRA
C10orf88
FAM207A
GFM2
TMEM222
TNPO3
MNAT1
GTPBP3
MRPL3
CPSF1
POLR3B
SF3A3
ZNF791
ZNF490
ZNF391
VPS25
BLOC1S6
DSTYK
MKRN2
C11orf49
TIGD1
EIF4E2
DRG2
TVP23B
MRPL30
MITD1
ATPAF1
BCAT2
TATDN3
NSL1
UTP3
MST1
MRPL16
NDUFC2-KCTD14
NDUFC2
EEF1AKMT4-ECE2
EEF1AKMT4
ALG3
GTF3C3
ZNF302
MAF1
CPPED1
AQR
FAM98B
GALK2
COPS2
SPAG8
SLC39A13
SELENOH
STARD3
ZNF205
LSG1
YIPF2
TIMM29
MEIG1
TSPAN10
NPLOC4
HNRNPA1L2
YBEY
MCM3AP
SMG7
SLC25A53
VPS45
THEM4
CLK3
SNAP47
JMJD4
THAP10
LRRC49
CYREN
FAM227B
DTWD1
PEX3
ADAT2
NSFL1C
MTERF4
COQ3
MTOR
PUS10
PEX13
TRUB2
COQ4
FBXO22
MRPS22
RPL37
METTL9
YIPF3
POLR1C
TEFM
AGK
ARL6IP4
TOR1AIP1
BRF2
TXN2
TIMM9
KIAA0586
SF3B6
FAM228B
PLEKHM3
TRDMT1
CFAP298-TCP10L
CFAP298
ZER1
EIF2D
PCYT1A
RPS7
SNRPD3
GUCD1
C18orf21
TMEM101
DDX1
RPL29
MRPS34
EME2
RUVBL1
EEFSEC
NELFB
MARK3
TMEM69
NUDT5
CDC123
SSBP1
NUP54
MPHOSPH10
MCEE
SLC44A1
WDR31
MTIF2
PIGL
SAR1B
GTF2H4
SLC39A3
C12orf73
LTN1
DLST
TUT1
NUF2
ALG10
PPIL3
NIF3L1
TMA16
BANP
PPIL1
PDCD6
PCID2
CUL4A
LMAN2
WDR36
TBC1D13
TMEM242
ZNF581
ZBTB11
KLHL20
ERI1
CCNC
FAM118A
MRPL58
MTRNR2L10
LAS1L
DHX33
NXT2
GRPEL2
IFTAP
ANAPC5
SREK1IP1
CWC27
CACNG8
PRRG2
NOSIP
INTS5
WDR25
WARS1
SNRPB
DNAJC25-GNG10
DNAJC25
NAA20
TTC26
TMEM68
TGS1
MTMR9
ZNF195
C17orf75
ZNF461
DDT
SEC11A
RFC4
C16orf46
PPIP5K2
KCTD5
PTPRM
VWA8
ZNF562
DNAJC24
DCDC1
ZC3HC1
RAB18
MTRF1
DPAGT1
ERCC6L2
MED18
EMC4
ANKRD40
MRPL39
TSSC4
SRP19
MAP2K5
KRR1
PHKA2
YJU2
TRAPPC10
ZNF846
CNPY3
NKAP
NEU3
SLC25A21
COA6
ZNF564
TM9SF3
ACBD6
MTMR4
DPP9
SDHAF3
MTHFD2L
FAM168A
MCAT
SBDS
ZNF410
SEC22B
NFKBIL1
ATP6V1G2
PPP1R11
UBIAD1
ZSCAN12
TIGD6
HMGXB3
SPCS1
GLT8D1
SMIM26
MBTPS2
DNAJC2
FBXW8
MFAP3
FAM114A2
NUDT4B
NUDT4
ZNF623
LIG4
ABHD13
DNAJB12
GFM1
MRPL53
SPATA5L1
GATM
CLOCK
CAP1
RSPH3
TMEM30A
SMIM19
SLC20A2
RBM28
VIPAS39
AHSA1
PUM3
AGO3
SLC52A2
FBXL6
ZNF622
ZSCAN9
PRORP
PPP2R3C
DDTL
RPS20
KNSTRN
AP5Z1
UQCC1
SH2B1
TUFM
MTG1
ZBED9
FBXW11
LRRC58
TUBGCP3
EXOSC3
CBLL1
PRSS27
TDP2
ACOT13
NVL
UFC1
ATG5
SNRNP200
C12orf57
TMEM199
POLDIP2
TTC14
ZNF549
MAGEF1
ZKSCAN4
ALDH3A2
MTR
TMEM128
CDC16
ZNF596
C8orf82
C21orf91
TXNDC9
EIF5B
PRKAB1
PSMD6
TTC23L
KIF22
EXOSC4
PYURF
PIGY
HERC3
SPDL1
JRK
UNC50
COA5
TPD52L2
PROSER1
NHLRC3
NOTCH2NLC
NOTCH2
COPS4
METTL6
EAF1
CARD8
POC5
ZNF668
ZNF646
PSME3
STMP1
RSL24D1
PDCD6IP
MLLT11
CDC42SE1
DISP1
LCORL
DCUN1D5
DDX21
WDPCP
MDH1
NUP153
NUP107
SEC16B
MKRN3
RPS4Y1
ZNF579
POLDIP3
OPA1
GABPA
ATP5PF
PDCD2
RFX7
C8orf33
NSUN4
IPPK
ZNF558
TYW1B
ZNF570
ZNF569
PPID
PIGQ
OGFOD2
TYW1
DPH7
USE1
ECHDC1
CCDC200
FBXO28
CCDC152
FANCM
CSTF2
C4orf3
SIRT4
EIF3D
NDUFA12
SDR39U1
MVB12A
SRSF7
NFIB
LRRC8A
KYAT1
HSP90AB1
SUGT1
VPS26C
TAF12
NDRG1
PNPO
SCRIB
NIPBL
STK3
FBXW2
FIP1L1
INVS
ERP44
OSGEPL1
H4C11
SPATC1L
NOP2
C8orf76
ZBTB4
POLR2A
EIF3H
H4C14
MPDU1
LOC100996842
KLHL9
SNRPD1
PRPF18
NCBP2AS2
NCBP2
H4C15
ABRAXAS1
SLF1
KIAA0825
SLC35C2
TOMM22
SRBD1
DDX18
ATF6
TPRKB
RARS1
NCAPD2
MRPL51
ETV5
GPR137
PSMC2
MANBAL
RPS27
PSMD11
SLC30A6
GOSR2
DBF4B
SCNM1
LYSMD1
EFHC1
SPATA6L
PLPP6
MTAP
CHIC2
JOSD2
BBS10
CCNL1
CLTA
DPM3
TANK
HP1BP3
DDX19A
EFR3A
CCDC14
POLR1B
SARAF
PRPF3
CCN2
APMAP
PIGC
FOS
C6orf89
ETV4
ZNF101
ZNF35
RPL41
NOTCH2NLB
NOTCH2NLA
CALM1
CCDC22
ZBTB40
EIF4A3
H2BC21
H2AC21
H2AC20
ELAVL1
TSSK6
NDUFA13
EIF4G2
VPS53
TSPOAP1
MRPL54
APBA3
APTX
WDR4
GEMIN2
ARL6IP1
FUBP3
PABPC4
ELMOD2
PGAM5
RPS6
DTD1
CDK12
RXYLT1
LYPLA2
RREB1
AZIN1
ARMC1
DIS3L2
PRDX1
APEH
LCMT2
ADAL
UTP23
EBNA1BP2
CFAP57
PSMA5
SPG11
GLI4
EFTUD2
DIAPH1
CCDC103
ZSCAN25
H2BC18
GLO1
DHPS
SRSF2
MFSD11
YRDC
PARP11
C1orf122
NAA50
ATP6V1A
JPT1
ZCCHC7
TUT7
DBNL
H4C12
DPM2
PPAN-P2RY11
PPAN
HSPBP1
ENPP4
CLIC5
SLC25A32
INTS2
DCAF13
PARP2
EIF4A1
SLC9A1
KIAA0100
ARID4A
VPS36
NFKBIZ
CSKMT
C11orf98
AP2B1
TTLL12
SCO1
ADPRM
CTR9
ZNFX1
TTPAL
POC1B-GALNT4
POC1B
STYXL1
NEK9
MDH2
GOLPH3
SMC4
SLC3A2
RAD23A
CAAP1
S100A10
ZNF3
EBAG9
ZNF580
STAU1
DDX27
RMDN2
TBX15
GBA
CCDC85B
H1-5
YKT6
POLR2M
MCL1
ZNF669
TIMMDC1
SDAD1
GTF2H3
EIF2B1
MRPL24
TTI2
SLITRK3
TOMM5
H1-2
RGL2
MFSD14A
TRAM2
BRD2
ID1
VMP1
PTRH2
KAT6A
ZNF684
TFRC
RFC2
WDR43
IPO7
KRBA2
CCNT1
SNAPC3
LMNA
RHOT2
PGGT1B
MELK
WDR55
HERPUD1
CCDC38
AMDHD1
PLRG1
L3HYPDH
JKAMP
PNP
PGAP3
ERBB2
ZFP62
TMEM230
NKIRAS2
DNAJC7
CHMP2A
STK36
RNF25
KDM5A
CCDC77
UGGT2
U2AF2
SELENOK
MOCS3
MBNL1
DPM1
CCT5
DPY19L3
SSNA1
RPS3
ANAPC2
H2BC11
H2AC11
CALM2
ATAD2
OSGEP
MAT2A
APEX1
PCIF1
AMOTL2
ZNF697
IGBP1
H2AC19
H2AC18
GNAI3
CAST
MAK16
MRM1
CALR
ADAR
SETD6
H3C2
EXO5
RHOB
ZSWIM6
ZNF682
SERPINI1
RPL37A
PDCD10
LAMTOR5
CYP4F11
DUSP6
BCDIN3D
TUBB3
RCC1
UBLCP1
MED30
TRPS1
SLC7A5
C15orf61
PNN
LRRFIP2
HEATR6
DUSP1
PRADC1
HIPK1
CCT7
AP4E1
NEPRO
TAF1B
RNPS1
ITGB1BP1
CPSF3
DHX8
SLC35E1
RBM34
PNKP
LINGO2
H2BC12
H2AC12
MRPL27
MINPP1
EME1
TBRG4
HSPA5
PABPC1
OXNAD1
DPH3
YY1
USF1
P4HB
HIF1AN
GMFB
UAP1
TMEM129
TACC3
RPL6
HMBOX1
FANCD2
APPL2
TBL3
NPAS4
SYCE2
FBXW9
RPS9
GADD45B
CCN1
SCAMP3
LAMTOR1
H3C13
ASPH
RB1CC1
JUNB
H1-3
NEIL3
MAN1A2
ZC3H10
MRPL33
CMC1
ZNF670
ZBTB26
PLAG1
CHCHD7
CD44
TCOF1
SLC2A3
RPAIN
PERP
NUP88
MRPS14
HAUS4
SNRPE
RFX3
PLSCR4
ZNF557
PDE6D
KIF23
BCLAF1
SCML1
H2BC4
H2AC6
GGPS1
ARID4B
ANO10
ABHD5
ZBTB6
USP17L8
OSER1
TP53RK
SEC24C
ZNF768
RBM39
NEMF
TPM3
SELENOT
PPIL2
NUP214
WASHC5
SLC38A2
SFT2D3
NSMCE2
CD1A
PHLDA1
PCTP
GABPB1
SYNCRIP
HNRNPAB
CYSTM1
ANP32E
PYROXD2
H3C15
H3C14
VARS2
DUSP4
SRA1
MCM3
GTPBP8
GTF3C6
EIF1
BNIP2
STK17A
SPRY4
PEX12
TFPT
PRPF31
ARHGEF39
RGP1
GBA2
C8orf37
ARNTL
TMEM50B
PCBD2
CCDC25
AKIRIN2
ZFPM2
UBL7
SF3A1
CNBP
CLUAP1
CCDC157
UHRF1BP1
TPRA1
MSH4
FAM83D
EIF3A
CLCC1
ADPGK
ZNF136
RPS26
OVCA2
GPAM
DNAJA1
DDX60L
ADH5
ZNF197
ST3GAL1
CITED2
VCPIP1
RBM42
PALB2
IMPDH2
DCTN5
C8orf44-SGK3
VPS28
TBL1X
ZBTB21
SRFBP1
SLTM
FAF2