ChIP-Atlas: Target genes

Potential target genes for CPSF3

Query protein: CPSF3
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX5441330 | HeLa
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

Download: TSV (text)
Links: Movie and Document for ChIP-Atlas Target Genes
CPSF3's Target genes

◢ CPSF3: Average

◢ SRX8018228: 293

◢ SRX8018229: 293

◢ SRX8018230: 293

◢ SRX8018231: 293

◣ SRX5441330: HeLa

◢ SRX5441331: HeLa

◢ SRX5441334: HeLa

◢ SRX5441335: HeLa

◢ CPSF3: STRING

MAMDC2
RABL2B
TSN
SNX16
RABL2A
ZNF335
SRD5A1
NSUN2
MAPKAPK5
POLR3F
DZANK1
DYNC1LI2
NCLN
H1-2
DUX4
NUP85
MTRNR2L8
H4C14
PPARA
ICE1
UBE2I
H3C15
H3C14
H2AC19
H2AC18
OAZ3
DENR
CACTIN
NVL
PSMG2
CEP76
H4C15
C19orf48
HSPA9
TAOK3
SUDS3
FAM187A
EFTUD2
CCDC103
RPS11
RPL13A
SLC35B1
H2BC5
H1-4
DCTN1
DDIT4
KRBA2
VDAC2
FRG2C
UPF2
H4C12
NME6
CAPRIN1
MRPL11
ZNF576
IRGQ
SART3
ISCU
MRPS7
GGA3
RBM39
RWDD1
MTRNR2L2
MSH3
DHFR
POLR2E
H4C11
FRG2
LYRM4
FARS2
SUCLG1
WDR74
IPO13
COMMD1
CCT4
RBBP5
ACTR10
B3GALT4
EXOSC5
BCKDHA
PI4KB
BLCAP
GOLM2
ARF3
VARS1
RABGGTB
SNAPC5
FARSB
CDK12
MRPS5
STAM
IER3
FLOT1
MUC3A
COX7A2L
ZC3H10
RPL41
ID3
REXO1
VPS28
RPS2
NDUFB10
H2BC21
H2AC21
H2AC20
MSH4
MPDU1
LOC100996842
CD68
RPL13
SCRIB
SKP1
H4C3
H1-6
ACP4
RPL22L1
AMDHD2
PHF23
DVL2
CCDC200
ATP5F1E
PCBP1
CNPY2
SPHK2
RPL18
FAM83E
GH1
PSMD12
GOSR2
VPS52
RPS18
VTI1B
VEZF1
H2AZ1
DNAJB14
COX20
CDC73
PSMD1
SEC61B
TSNAX
HADHB
HADHA
C6orf226
POLG2
RRP36
MEA1
USP1
EDC4
PES1
SUMF2
STAM2
RPL17-C18orf32
RPL17
C18orf32
POLR2J3
PDAP1
BUD31
COL23A1
EPN1
NDUFA4
TLCD1
NEK8
ZRANB2
SYNRG
TAF9
RAD17
AK6
SELENOF
HS2ST1
EIF4ENIF1
ATP5MG
SUPV3L1
NUP205
ZNF34
RPL8
NRAS
FAM174C
EIF2S3
SECISBP2
RPL21
PAK1IP1
C6orf52
PTGES2
GCN1
PNO1
PIN4
PDHX
APIP
TM9SF1
CUL7
IDI1
AXDND1
INPP5E
MTRNR2L1
GADD45GIP1
RIT1
AKAP8
H2BC4
H2AC6
NFKBIL1
DDX39B
ATP6V1G2
UBE2M
CHMP2A
MRPL24
MAZ
ANAPC7
GOLGA5
FAM131A
KMT2A
APOM
STUB1
JMJD8
DNAJC9
RNASEK
C17orf49
ZNF276
VPS9D1
RXYLT1
MRTO4
EMC1
NECAB3
RPS27A
CLHC1
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
BAG6
DPH7
RPS23
ATP6AP1L
MRPL38
TTC8
SRSF11
TMED1
PRRT2
PAGR1
SEC31A
RCOR3
YJU2
ADK
SMC2
DPH6
ZNF581
ZNF580
GPAA1
EXOSC4
PCBD2
H3-3A
OR6B2
NDUFA10
MMP24OS
MMP24-AS1-EDEM2
OAZ1
SYCE2
H4C2
H3C2
H2AC4
RPL35A
IQCG
BICRA
FAM104A
C17orf80
TMEM132A
CHD2
DHRS11
RABL6
GLRX2
PYGO2
LOC101928120
TIMM13
ECI1
H3C13
H2BC18
GET4
PIP4K2B
NAT10
C19orf53
H2BC11
H2AC11
ATAT1
ARFGAP2
RAD23A
RBKS
BABAM2
SLC25A10
ENAH
TBK1
SLC3A2
AP3M1
SIRT7
EXOSC6
RPN1
ARHGAP4
HNRNPU
TMPPE
NANOS1
GLB1
PROSER1
NHLRC3
SNAP47
TMEM230
MAN2C1
RPS12
MAPK8IP3
ABTB1
MAD1L1
NUDT4B
NUDT4
PHF1
DONSON
CENPVL3
DAPK3
ZBTB37
SCAMP3
NDST2
GGA2
ANKLE2
OTUD7B
GTF3C4
DDX31
MEMO1
CDK9
ZNF513
BAZ2A
MUC1
PRKAG1
ULK3
DPY19L4
SF3B3
COG4
TARS3
EIF2D
HSPA1B
DENND4B
UFM1
LRRC37A3
DRAP1
C11orf68
TBCK
MRPL40
HIRA
CCDC138
AIMP1
MORC3
RABGAP1
RPL7
RDH10
BCAP29
KIF27
ZNF341
TAF10
CMTR1
CISD3
XPNPEP3
ST13
DNAJB7
USP21
DYRK1B
PFDN5
MYG1
MAML1
GRAMD2A
POLR2C
RHOT2
PAF1
MED29
WDR90
H4C1
ADNP
SLC35E3
CTNNB1
C5orf24
EGLN1
DGKZ
SPATC1L
HYI
C7orf26
PNMA1
PACS1
KLF12
CLK3
ATXN7L2
HOXA3
ZNF398
NAXE
CCDC34
ID2
AGO3
MORF4L1
PPFIA4
TBC1D13
GPS2
ADARB1
ROGDI
PPP3CB
H3C1
H1-1
TOM1
ZNF653
TUBB
RNF166
MOV10
CTU2
LAMP1
ALKBH5
POMZP3
SURF6
FTH1
ATXN2
NFAT5
LRRC24
H2BC12
H2AC12
PABPN1
STRIP1
GTF2IRD2B
GTF2IRD2
C8orf82
CXorf38
ZNF76
BRWD1
RCC1
PRRC2B
POLDIP3
UPF3A
FUT11
NME3
MRPS34
EME2
KIAA2026
NDUFS3
KBTBD4
TRAP1
SELENOH
IMPDH2
TXNRD2
COMT
H4C8
RUFY2
H4C5
DESI2
PCDH9
PRKRIP1
HMCES
B4GALT7
ZMIZ2
RAB4A
ZNF862
FAM118A
H2BC7
CIRBP
RUVBL1
NOXA1
EEFSEC
ZCWPW1
MEPCE
ZNF865
ZNF383
PRSS27
PDE4DIP
IBA57
KMT5B
TSPAN10
NPLOC4
C17orf75
TRIM65
SLC39A13
TXLNA
HMGN2
RCE1
FBF1
ST3GAL3
RPS29
LRR1
FDX2
CELF1
RPL6
RHOB
SMYD2
NOLC1
RICTOR
GPX1
BAG2
TMEM223
TMEM179B
POGZ
MTHFS
MLX
SNAPC4
FNBP1
GORAB
PPP1CC
FLOT2
AKT3
PCBP4
BNIP3
SLC25A42
NDUFS7
CHAF1B
TTYH2
ASXL1
KAT6A
STMP1
SH3BGRL3
HIPK1
TARBP2
MAP3K12
CUL9
PURA
H3C4
H2AC7
TMEM79
SMG5
FBXL3
VARS2
SRRT
ZFAND6
LMBR1
JUNB
PCBP2
RRM2
GDI1
CTNNAL1
SSX2IP
RECQL4
LRRC14
NKIRAS1
MTF2
TEX38
MKRN2OS
MKRN2
ATPAF1
XRN1
HNRNPF
DNLZ
DNAJC21
CDH24
VPS4A
TMEM150A
UFSP1
SLC39A4
RASA4B
CPSF1
COX18
ACHE
KDM3B
DIDO1
SAMD1
ACBD6
HMGN1
TTC33
NCBP3
CHD1L
NPM3
FGF8
FBXO4
SUPT4H1
TMEM267
DSTYK
CCDC88A
SLC39A7
RXRB
LUC7L2
HSD17B8
LLGL2
NOTCH2
NAPRT
TIGD3
NUB1
SLC39A1
CRTC2
SRCAP
NUDT16L1
LOC730183
HDAC10
COASY
TP53BP2
CSRNP2
ANKRD54
ABL2
SPCS1
RNF151
GLT8D1
ZBTB45
GOLGA1
DDX59
PDCD6
NCOA7
TYMP
SCO2
JMJD4
RFX1
PYCR2
FAM207A
KANSL1
AGK
KMT2C
WDR37
TAOK2
B3GALNT2
RNF225
DERA
ACBD3
SRSF4
NDUFB2
NBPF1
GTPBP3
GBA
ANO8
CD320
SCAP
PWP2
LOC102724159
TRAPPC8
THEM4
PDCD2
CCDC78
SETD6
SOD2
GPN2
NXF1
COX19
OSGEP
DDAH2
APEX1
NME4
DECR2
TM2D3
UBA2
RABIF
PARP1
BHLHA9
MFSD14A
MTRF1L
PRKAB2
TCF3
BOLA3
LRRC40
CCDC106
ACADM
PANK3
NOXO1
GFER
DIAPH1
H4-16
H2AJ
ZNHIT2
WDR73
UBE2Z
NMB
STIMATE-MUSTN1
STIMATE
RING1
CDK11B
CDK11A
BRAF
CASP6
RSAD1
MARCHF7
ERCC6L2
PRRC2A
MCOLN1
AIF1
TNKS1BP1
MARCHF6
FAM20B
COMMD3-BMI1
COMMD3
BMI1
STK36
RNF25
PAXBP1
ARHGEF11
SLC24A1
PMF1-BGLAP
PMF1
SKIDA1
MTARC1
H3C10
H2BC13
H2AC13
DLG4
ACADVL
C7orf25
IREB2
LBR
WDR27
C6orf120
VWA7
GAA
FAM199X
PHIP
DEDD
CCZ1B
VANGL2
H3C12
H2BC17
H2AC17
WIZ
FAM228B
DNAJB12
COG2
ANKFY1
TIGD1
SMIM19
SLC20A2
EIF4E2
RRNAD1
ISG20L2
ARHGAP35
THOC5
LRP6
BHLHE40
POM121C
CALM1
TMSB10
THAP11
NUTF2
CENPT
SEC61A2
JAK1
B3GAT3
NUCKS1
TRIP13
TFAP4
PRDX1
NSFL1C
BRD9
FOXJ3
RNF187
RABGGTA
URB2
TTC5
TAF5L
ARSG
PUF60
TPTEP2-CSNK1E
SMIM13
NBPF15
GPR180
FPGS
EDEM1
KLHL11
PTPN11
RRP8
LATS1
ILK
AMDHD1
GATAD2B
AKT2
SCFD1
PFN1
PXK
CCSAP
SCAI
RPS10-NUDT3
RPS10
CHD8
ATRIP
TOMM20
THAP3
PATJ
LAMTOR3
DCAF10
SDCCAG8
CEP170
WDR48
SRRM3
SCN11A
RAD54L2
FAM219B
EHMT1
SMN2
SMN1
GMPPB
ARHGAP11A-SCG5
ARHGAP11A
AMIGO3
URGCP
EPHX1
MAP3K2
NCAM2
ITGB3BP
EFCAB7
CCDC97
CACFD1
ZFYVE9
UBE2J2
STPG3
RIPK1
NELFB
ARHGEF1
SLC44A1
METTL9
SP2
UNC119
STAU1
ZNF652
PRR7
NUF2
MATR3
INKA2
DDX20
ZER1
SLC26A11
ENOSF1
SSRP1
P2RX3
HAX1
EIF4H
TSC22D1
GPANK1
C6orf47
PTCD1
EYA4
CPSF4
SF3B6
DENND2B
ZNF35
KAT8
SLC12A6
SETD5
PCNX2
NT5C
DNAJC25-GNG10
DNAJC25
RBM4
ZBTB2
FAM76A
RNF220
POLD1
PEX7
NOL7
KLHL15
EIF4A1
VCP
UCKL1
RILP
BTBD10
PAIP1
H2BU1
H2AW
CCDC130
SEC11C
FBXW2
TRIM52
STC2
PSMG4
TMEM68
TGS1
RRAS2
OPN3
MCL1
CHML
ZNF326
CHUK
RAVER2
CZIB
ZNF251
CUL1
URGCP-MRPS24
TRAF4
IMPA1
WDR47
SFXN4
YBEY
MCM3AP
ORAI3
MIER1
ING5
EZH2
ZSWIM8
TBC1D10C
PPP1CA
DCP1A
CHCHD1
ANKRD40
ECHS1
RGL2
SLC35B2
IFITM1
ERLIN1
CLN5
REV3L
ATAD3A
MAPKBP1
LIX1L
CDC42BPA
STX18
E2F3
CEP350
POLG
CYBA
ARHGDIA
ZZZ3
ZNF446
CELSR3
TMEM222
SQSTM1
JPT2
TRIM8
GSTO2
COX5A
PUS7
NUMBL
WDR24
SELENOO
FOXP1
GTF2H2
CEMP1
CDC5L
NR1D2
TONSL
CABYR
PHACTR2
FBXO28
TRIM3
SBF2
RPEL1
MBTPS1
ADSS2
NFKBIA
PIP5KL1
AKAP1
ZMYM4
NPRL3
TUSC2
RPAP3
PLPP5
NSMCE4A
MLXIP
EXOC2
CNP
ACTB
KLF9
GANAB
EFCAB2
TOB2
SP1
PRKAA1
SP3
CRELD1
ZBTB4
TMEM43
SLC35G6
POLR2A
CHCHD4
ATXN7
ZNF148
VPS36
TRMT2A
RC3H2
RANBP1
PAM16
MRPL53
CKAP2
RPS19
ACTR8
STYX
SLAIN1
GCLC
AURKAIP1
SEC13
HAGHL
YARS1
S100PBP
KIF21A
FARP2
DTWD2
CD63
ANKRD36
RHOC
FRA10AC1
SDE2
ZNF511
TUBGCP2
OVCA2
MADD
UBC
MDM4
IFITM2
BACH1
ZNF48
ZNF445
YBX1
LIN9
IPO9
TSC1
TATDN3
ROM1
NSL1
GFI1B
ERCC1
EML3
AMZ2
SNAP29
PI4KA
MSI2
TXN2