ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4909431 | HCC3153
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◣ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MAMDC2
NPAS4
ENOSF1
PGK1
SGSM1
FRG2C
IQSEC3
PSCA
CYB5R4
XKR7
VIM
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CRBN
RFX1
HTR5A
C8orf33
LY6K
COPS7B
PDE6D
TAS1R1
NOL9
TDRD7
ALKBH3
ZCCHC14
FRG2
SPOP
POLR2J3
NAPRT
MROH6
SNX16
OAZ3
PAXBP1
CFAP45
VPS50
HEPACAM2
CYRIB
MTMR2
SCRT1
H4C12
SSBP1
WASHC2C
EIF2D
SMIM17
TFAP2A
GBA
RBM48
PEX1
ERVW-1
NDUFS7
WASHC5
NSMCE2
LAMP1
ADAMTS17
SFSWAP
SLC39A4
CPSF1
HIVEP1
SUMF1
NOTCH2
DNLZ
TOP3B
TMED1
COL12A1
ANGPTL4
MRPL16
HES3
SNAP25
MTBP
MRPL13
COASY
PPP1R7
PASK
TIMM23B
PARG
IGSF9
TEFM
ZNF555
INTS12
GSTCD
DNAJB12
DNAJC11
RCOR3
NAALADL2
SELENOH
SSNA1
ANAPC2
GTF2H4
B4GALT7
DUX4
RNF130
ZNF408
ARHGAP1
HDAC2
MUC3A
NBN
JRK
SH3BP4
GPR158
KLHL32
NDUFAF4
RHNO1
FOXM1
FAM83A
SLC35F3
ARID3B
NDUFS3
KBTBD4
GGTLC2
PUM3
AHCY
TMEM41A
FAM24A
RAB37
PEX19
GGT5
TUBB2A
SPATA25
NEURL2
CTSA
SCRT2
DPY19L4
ATG16L1
POLR2J2
KAT6A
RTBDN
KCNJ15
ITGB2
TRMT61A
RFC3
ATL3
TMEM222
TIMM23
TPRN
TMEM203
NDOR1
MTERF4
AGK
ELF3
ELOVL4
AURKAIP1
MRPL39
DRG2
H4C11
CCL20
PGBD5
TAGLN2
RRP15
H4C14
VIRMA
H4C15
EFNA1
JAK2
ZNF16
ATF3
BCAR3
TRAPPC9
SRI
CPLX2
CDK5RAP1
VPS45
ZNF830
CCT6B
SSRP1
P2RX3
PIH1D2
NKAPD1
NUF2
WDR36
DNAJC25-GNG10
DNAJC25
UTP23
UBE2Q1
LRRC47
RIOK1
CAGE1
RAB22A
STX16
TATDN3
NSL1
SLC35E2A
SEC13
NOL7
SEZ6
OR2A42
TRMT1
NACC1
LRRC29
COMMD2
NEK2
HAGH
FAHD1
PPM1B
NCSTN
COPA
AXL
CHD1L
PRKAB2
MTF2
EPS15
COQ3
ATG14
MRPS22
ZKSCAN8
SPATA2
OR2A1
TPBG
NEBL
RNMT
FAM210A
MTRNR2L2
MSH3
DHFR
GSN
RAB14
MTRNR2L8
WDR74
CAMTA1
NKX1-1
LIN28A
INSM2
MTRNR2L1
ZEB1
CCDC200
KCTD18
DLGAP3
POLR3H
NBPF1
KCNH7
HPCA
ZNF77
EPHA10
RNF187
TPH2
RGPD2
RGPD1
FANCD2
CELSR3
MARCHF4
KXD1
BARHL1
ASF1A
NME1
SLC35A4
APBB3
USP30
MTRNR2L9
UTP20
DNAJC5
SVOP
TIPARP
PDE4DIP
SLC39A3
NAGPA
SCFD2
ZNF581
TTLL4
CDKN1A
CCDC106
WASHC2A
TMEM242
LARP1
TTC26
ZNF335
FARSA
CALR
D2HGDH
UTP25
TRIP4
EPN1
SPNS1
HEXA
NEIL3
MAPK8IP2
IDH3B
TXLNA
L1CAM
DHDDS
CHGB
ITGB3BP
EFCAB7
SUPT7L
SLC4A1AP
SMG8
FBRS
ZCCHC7
TAS1R3
VPS33A
FAM227B
DTWD1
ZCWPW1
MEPCE
IPO4
TBC1D19
EIF1AD
BANF1
GLRA1
GTF3C3
GATB
RBBP5
COMMD9
MTFR2
PSMD9
HPD
NUP214
P4HA1
DHX40
CRNKL1
CFAP61
IQGAP3
PGAM5
SOD2
PMF1-BGLAP
PMF1
SF3A3
COX16
PEX3
ADAT2
NCAPH
METAP1D
TMEM248
POM121
UTP11
PLEKHM3
RBM19
PAFAH2
NPPB
TDRKH
NOL8
EXO1
CENPP
UBFD1
EARS2
ZC3HC1
OSCAR
NDUFA3
NEUROD4
SGO1
NUP107
CENPF
RPS19
MRPL44
CCDC107
HIBADH
HMGB1
RRM2
RABGAP1L
RPS7
EIF3F
NFE2L2
GPATCH3
UBE3B
KCTD10
KCNB1
USP54
WTAP
CCNG2
IFT46
TIMM17A
METTL15
KIF18A
VTA1
NMBR
DCUN1D2
TARS2
KDM2A
DDX18
TSFM
RFC1
MED23
CERCAM
ZNHIT2
CFAP54
MTRNR2L10
PWWP2A
PSEN2
RTN4
CCNA2
FXN
TACO1
CBLL1
LPIN1
ATR
SEC24B
USP2
PRRC2B
USP35
KCTD21
CKAP2L
STX18
RRP12
KDM5B
CPPED1
EBAG9
QTRT1
BIRC5
BEND3
YARS1
S100PBP
MTDH
SEC31A
CDT1
THAP9
TRMO
TRIM24
KLHL18
KIF9
KIAA0895
DNPEP
GOLGA7
RGL1
GET3
PPIP5K1
CKMT1B
KIF20A
BRD8
USPL1
PKDCC
RTEL1
PRRT3
TM7SF2
FBXO5
RBM28
ZNF276
VPS9D1
TMEM199
POLDIP2
WDR11
SAP30BP
RECQL5
CSTF1
AURKA
STAT3
SEPTIN9
ESCO2
CCDC25
FBXO4
FAM72C
TOMM22
ARPC5
POLR3F
DZANK1
COMMD4
MTIF2
PYY
NAGS
STMN3
LRRC59
CCDC88A
TRAPPC6A
BLOC1S3
TEX46
KDM1A
KIAA1586
SNX1
CIAO2A
NUP54
NBPF15
PSMD6
PDE1C
UBE2O
AANAT
TXNDC9
EIF5B
CCDC86
CRKL
EBNA1BP2
CFAP57
WBP1
NSUN4
INO80B
PUS10
PEX13
YTHDF2
ANKRD31
SLC25A51
RAE1
DPF1
NDUFAF5
ESF1
SMIM12
NLE1
KLHL20
ASMTL
NOS3
FAM117B
TEKT2
BOLA2
ADPRS
METTL1
EEF1AKMT3
RAD54L
ZCCHC4
TTC27
ADNP
PDE4C
GTF3C5
TJP3
PSMC2
FAM133B
DNAJC2
EMILIN2
SPG21
RRS1
ADHFE1
PFDN4
ANTXR1
SLC25A26
SLC25A40
DBF4
LTV1
LHFPL4
SPAAR
N6AMT1
ACVR1
SASS6
TIGAR
DMAP1
SLC12A9
NUP35
ANAPC5
MRPL3
CBWD5
BCAS3
CYB5A
SLC33A1
GLI4
SDAD1
ARHGDIA
MACC1
MICAL3
TRUB2
COQ4
FAM72A
FAM98A
H6PD
STAG1
UBC
SLX1B
SLX1A
ERG
DCLRE1B
BOLA2B
AP4B1
HUS1
ARHGAP45
SUGCT
NOP16
MPLKIP
HIGD2A
EIF3H
VPS29
RAD9B
RAB42
DNAH7
SMARCD2
SLC25A45
FRMD8
YIF1A
TMEM151A
RTTN
TTC31
DCAF10
MXI1
FAF1
SYT11
GON4L
PIKFYVE
ATP5F1E
MFSD1
LSG1
TSEN54
CASKIN2
PDE4A
SGO2
CKMT1A
GDAP1
SNRPB2
ELMO1
RNF166
CBWD3
RAB18
C12orf66
SLC45A4
KIF18B
BOD1
PBK
INTS7
DTL
TSR3
GNPTG
NTSR2
UBE2L3
RBM42
NOL6
RUVBL1
POLR2J
FAM207A
EIF2B3
SYNJ1
KHK
BNIP1
CORO7
MRPL40
HIRA
NDUFB3
FAM126B
MRPS18C
HELQ
ANKHD1-EIF4EBP3
ANKHD1
SMIM30
BOLA2-SMG1P6
MRPS23
CYP27B1
NOP53
SRRM3
FAM98B
COL23A1
MARCHF8
DZIP3
CIP2A
RAP1GAP
NMNAT1
MRM3
LZIC
GLOD4
FRA10AC1
MRPL30
MITD1
PSMD3
NDUFC2-KCTD14
NDUFC2
RAD51AP1
C12orf4
RDH5
ITGA7
BLOC1S1
PIP5K1A
CDC73
EXOSC5
BCKDHA
MFSD14A
ANXA5
ZNF668
MRPS15
KAT2B
ANK1
GATAD2A
CWC25
TAMM41
SST
DHX37
BRI3BP
AAR2
ACBD6
ZSWIM8
CHCHD1
FRMD3
GFM2
VPS37D
TMEM181
METTL25
CCDC59
SCP2
SYNJ2
WDR4
BAIAP2
DNAJC6
PDE11A
TFIP11
SOGA1
HSD17B8
CCDC146
TMEM120A
MIS18A
CENPS-CORT
CENPS
TRMT6
MCM8
XKR9
LACTB2
CGGBP1
PASD1
MAIP1
ST6GAL1
GRWD1
CDK7
SYTL3
MTR
CDC25A
C2CD5
CARD8
U2SURP
DSTYK
CLK3
E2F6
C2orf42
OGDH
FAM228B
TRIAP1
PIEZO1
FBXO48
APLF
SYF2
KDM3A
ANP32E
DNTTIP2
C10orf88
IL1R1
NGDN
TICRR
RBM45
RABL2B
THAP7
CFAP299
IBA57
GTF2H3
EIF2B1
KTI12
UTP3
STEAP2
RING1
NADK2
WIZ
MOCS3
DPM1
ACVR2A
DIAPH1
SNRPE
NUDT15
TBRG4
GTPBP10
RGPD8
RGPD5
KIF15
KIAA1143
ZFYVE1
FNBP1
ZC3H15
SHC1
CKS1B
ZNF558
SMYD5
ZBTB45
PNPT1
FAM72B
TYW1
TBC1D30
SRSF11
DIABLO
TSN
STAT1
CBWD6
NAGK
BLCAP
SLC44A1
EXOC3L1
CACNG3
ANKRD12
SEC22B
COPS4
TYW1B
HSPA9
CDK11B
CDK11A
OPA1
ZNF391
GFM1
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
TPCN1
DGKZ
TRMT61B
QTRT2
EDC3
CCDC191
GRN
ZMPSTE24
ZDHHC12
PPIL3
NIF3L1
KRR1
FBXL13
ARMC10
HNRNPH1
POLQ
KCTD5
MAGEB10
ZNF398
NGB
PPP6R1
NSUN5
ERCC1
FAM72D
ATXN2L
SCRN3
CIR1
VGLL4
PRPF18
RIMBP3C
CLVS1
MRPS35
LSM12
G6PC3
RGPD6
HNRNPD
RGS3
TMEM237
TFPT
PRPF31
MRPL1
BSDC1
SF3B6
LSM5
RPAP3
KIF2C
TIMM9
RAD54L2
KIAA0586
UCHL5
RO60
CTCF
CDC20
CCNL1
KIAA0895L
CPNE4
PPIH
SHQ1
ZNF718
ZNF595
RAD18
POLR3B
GTF3C4
DDX31
TFB2M
CNST
KAT5
CCDC92B
TMEM170B
SBDS
MPHOSPH10
MCEE
CLUAP1
TSGA10
TMEM101
PRKAG2
DDX49
DCP1A
COPE
TAF13
SKA3
MRPL57
ZFYVE26
RAD51B
PSMF1
ENTPD4
AEBP2
STBD1
KLF1
EEFSEC
C17orf75
RPTOR
RAPGEF6
PIGU
C16orf71
ANKS3
MRPL27
KCNK12
EME1
SMG7
RBM4B
PLS1
CHRNB2
CFAP20
NR1H2
CTU2
TTC9B
GSTP1
ALG1
FOXJ3
SLC24A1
OS9
E2F1
HEATR1
RTF2
TRIM48
POMZP3
NEK6
BBS1
ALG10B
SYNPO
DDX1
SUPV3L1
PPIP5K2
TCTN3
SCNM1
LYSMD1
TOR1A
MRPL48
CDC6
SLC18A3
PSME3
GCDH
CHAT
EMC4
ZNF546
TOP3A
TIMM10
SMCR8
PHC2
CCNC
YBEY
MCM3AP
BMS1
LIX1L
NOC3L
ALG10
TEAD1
SPCS1
MRPL21
IGHMBP2
GLT8D1
RPIA
TAF3
DCDC2
C3orf38
TOX4
RNASEK
RAB2B
C17orf49
PSMB7
NAT10
KANSL3
FER1L5
ANLN
USP15
TBP
PSMB1
RUBCN
DSCC1
PC
YJU2
TIGD1
EIF4E2
WDR70
CCDC77
GTF2H2
CCDC142
PALM2AKAP2
NAPA
DPH1
C12orf73
BNIP3L
SUN2
WBP1L
NSG2
IPO11
SLC7A5
TMEM161B
FOXP1
MMP24
DCTPP1
CCAR2
PYCR3
SLC25A24
SCG3
NFIB
DHRS13
ZAR1L
PAK1IP1
C6orf52
BRCA2
ZNF165
PPWD1
PIGBOS1
PIGB
CFAP298-TCP10L
CFAP298
CENPK
REXO4
PARL
ADAMTS13
URB1
STAM2
ESYT2
C5orf51
ZDHHC24
ACTN3
SYT5
EVPL
TGIF1
RPL27
ECSIT
INKA2
IARS1
LNPEP
POLR1B