ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4909431 | HCC3153
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◣ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MAMDC2
NPAS4
ENOSF1
PGK1
SGSM1
FRG2C
IQSEC3
JRK
PSCA
RIPPLY2
CYB5R4
XKR7
VIM
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CRBN
RFX1
HTR5A
C8orf33
LY6K
PDE6D
COPS7B
TAS1R1
NOL9
TDRD7
ALKBH3
ZCCHC14
FRG2
SPOP
POLR2J3
NAPRT
MROH6
DUX4
SNX16
OAZ3
CCN4
PAXBP1
CFAP45
VPS50
HEPACAM2
CYRIB
MTMR2
SCRT1
DGAT1
H4C12
H4C11
H2BC15
H2AC15
REN
SSBP1
WASHC2C
EIF2D
MED16
SMIM17
TFAP2A
GBA
RBM48
PEX1
ERVW-1
NDUFS7
SLC35E2B
WASHC5
NSMCE2
LAMP1
ADAMTS17
SFSWAP
CPSF1
THEM6
SLC39A4
HIVEP1
PARD6B
NOTCH2
SUMF1
GPSM1
DNLZ
CARD9
TMEM262
TOP3B
TMED1
CSRP1
COL12A1
PTGES
ANGPTL4
MRPL16
ICMT
HES3
SNAP25
MTBP
MRPL13
HSD17B1
COASY
MLX
PPP1R7
PASK
ACP7
TIMM23B
PARG
IGSF9
SLAMF9
TEFM
ZNF555
INTS12
GSTCD
DNAJB12
DNAJC11
RCOR3
NAALADL2
SELENOH
SSNA1
ANAPC2
GTF2H4
VARS2
TMED9
B4GALT7
RNF130
ZNF408
ARHGAP1
HDAC2
MUC3A
NBN
SH3BP4
STAT1
GPR158
KLHL32
NDUFAF4
RHNO1
FOXM1
FAM83A
SLC35F3
ARID3B
NDUFS3
KBTBD4
FAM180B
GGTLC2
PUM3
ANXA1
EAPP
AHCY
TMEM41A
KLHL38
FAM24A
RAB37
PEX19
GGT5
TUBB2A
SPATA25
CTSA
NEURL2
SCRT2
DPY19L4
ATG16L1
POLR2J2
KAT6A
RTBDN
MAST1
KCNJ15
ITGB2
TRMT61A
CKB
RFC3
RTN3
ATL3
TMEM222
TIMM23
P2RY6
BHLHE40
TPRN
TMEM203
NDOR1
LY6L
MTERF4
AGK
ELF3
ELOVL4
AURKAIP1
MRPL39
DRG2
H2BC14
H2AC14
CCL20
PGBD5
TAGLN2
RRP15
H4C14
H3C15
H3C14
VIRMA
H4C15
EFNA1
JAK2
ZNF16
BCAR3
ATF3
TRAPPC9
SRI
CPLX2
CDK5RAP1
VPS45
ZNF830
CCT6B
SSRP1
P2RX3
STAC
PIH1D2
NKAPD1
NUF2
WDR36
DNAJC25-GNG10
DNAJC25
UBE2Q1
CHRNB2
RPS5
UTP23
LRRC47
RIOK1
CAGE1
RAB22A
STX16
KDM2A
TATDN3
NSL1
SLC35E2A
SEC13
NOL7
SEZ6
OR2A42
TRMT1
NACC1
LRRC29
COMMD2
NEK2
HAGH
FAHD1
LOC388282
SULT1A4
SULT1A3
PPM1B
NCSTN
COPA
AXL
CHD1L
PRKAB2
MTF2
EPS15
COQ3
ATG14
MRPS22
ZKSCAN8
SPATA2
OR2A1
TPBG
NEBL
RNMT
FAM210A
MTRNR2L2
MSH3
DHFR
KIF5C
GSN
RAB14
MTRNR2L8
WDR74
STX5
ARL4D
NKX1-1
CAMTA1
LOC102724770
DGCR6
LIN28A
INSM2
MTRNR2L1
CCDC200
ZEB1
KCTD18
DLGAP3
NBPF1
POLR3H
PDE4DIP
KCNH7
HPCA
ZNF77
EPHA10
RNF187
TPH2
RGPD2
RGPD1
CADM3
FANCD2
ZNF581
ZNF580
CELSR3
MARCHF4
KXD1
ART1
BARHL1
ASF1A
SRA1
SLC35A4
APBB3
NME1
USP30
MTRNR2L9
CCDC106
UTP20
TMEM242
LPIN1
ZNF23
CEBPE
DNAJC5
TIPARP
SVOP
CDKN1A
SLC39A3
NAGPA
AFAP1
SCFD2
SPTAN1
U2AF2
TTC26
TTLL4
LMLN2
WASHC2A
IFT46
ARCN1
LARP1
ZNF335
PRRC2B
RAD23A
CALR
TMEM101
ZC3H18
FARSA
EPN1
TRIP4
PCLAF
PPP1R35
D2HGDH
UTP25
SPNS1
PTPRN2
HEXA
IDH3B
SMG8
ZCWPW1
MEPCE
TAS1R3
LAT
PSEN2
NEIL3
NUP214
MAPK8IP2
RAP1GAP
TXLNA
L1CAM
DHDDS
CHGB
ITGB3BP
EFCAB7
SUPT7L
SLC4A1AP
CA4
RINL
PRR14
FBRS
ZCCHC7
VPS33A
PRR5L
FAM227B
DTWD1
TM9SF1
IPO4
TBC1D19
UNC45B
NLE1
EIF1AD
CST6
BANF1
GLRA1
GTF3C3
C2orf66
DHX40
GATB
FHL3
RBBP5
COMMD9
PYY
NAGS
MTFR2
SPDYE7P
POM121
PSMD9
HPD
P4HA1
CRNKL1
CFAP61
PMF1-BGLAP
PMF1
PKDCC
TTC24
IQGAP3
PGAM5
SOD2
SF3A3
CENPP
SEPTIN9
COX16
TMEM248
PEX3
ADAT2
PAFAH2
NCAPH
ITPRIPL1
METAP1D
RHEBL1
RABGAP1L
UTP11
SEBOX
PLEKHM3
RBM19
PDXK
NPPB
TDRKH
NOL8
EXO1
UBFD1
EARS2
SIT1
ZC3HC1
OSCAR
NDUFA3
SMARCD2
NEUROD4
SGO1
SLX1B
SLX1A
BOLA2B
BOLA2
NUP107
ZSWIM1
RPS7
SEC24B
GAS8
CENPF
RPS19
MRPL44
CCDC107
ARHGEF39
JUNB
HOOK2
HIBADH
HMGB1
RRM2
NFE2L2
EIF3F
GPATCH3
UBE3B
KCTD10
ERCC1
KCNB1
USP54
WTAP
CCNG2
PHRF1
TARS2
CERCAM
TIMM17A
RBM28
LMOD1
METTL15
KIF18A
VTA1
NMBR
CDT1
DCUN1D2
QTRT1
DDX18
TSFM
RRP12
APRT
RFC1
MED23
FXN
ZNHIT2
MRPL49
FAU
CFAP54
MTRNR2L10
PFDN4
RTN4
PWWP2A
PRRT3
CCNA2
TACO1
USP35
KCTD21
STX18
CBLL1
ATR
SPRED2
DNPEP
COX6A1
USP2
PHC2
DCLRE1B
CKAP2L
AP4B1
KHK
KDM5B
CPPED1
EBAG9
RGL1
IQSEC1
CHCHD1
BIRC5
BEND3
YARS1
S100PBP
MTDH
THAP9
SEC31A
PLEC
SHC1
CKS1B
NXPH3
EMILIN1
TRMO
SAP30BP
RECQL5
TRIM24
BOLA2-SMG1P6
KLHL18
KIF9
KIAA0895
CYP27C1
UBC
NOS3
FLAD1
GOLGA7
TEX46
ARPC5
GET3
PPIP5K1
CKMT1B
BUB1B
ARL17B
NSUN4
KIF20A
BRD8
TSR3
GNPTG
USPL1
GPN2
STMN3
RTEL1
DYNC2I1
UBE2O
AANAT
TM7SF2
FBXO5
ZNF276
VPS9D1
TMEM199
POLDIP2
ARHGDIA
WDR11
WBP1
INO80B
PSMD6
CSTF1
AURKA
STAT3
FRMD3
RBM47
ESCO2
CCDC25
FBXO4
CRYBG1
FAM72C
TOMM22
RAB42
INKA2
POLR3F
DZANK1
COMMD4
ADNP
MTIF2
DNTTIP2
CAND1
LRRC59
CCDC88A
TRAPPC6A
SMIM12
BLOC1S3
KDM1A
GTF3C5
KIAA1586
EEF1AKMT3
SNX1
CIAO2A
NUP54
NBPF15
PDE1C
ATP6V0D1
AGRP
TXNDC9
STAG1
EMILIN2
EIF5B
CCDC86
CRKL
EBNA1BP2
CFAP57
PUS10
PEX13
YTHDF2
ANKRD31
SLC25A51
VPS72
RAE1
PIP5K1A
MTRNR2L3
DPF1
CORO7-PAM16
CORO7
CBWD5
NDUFAF5
ESF1
DGKZ
KLHL20
ASMTL
ELOVL1
CDC20
SYNJ2
PBK
MFSD1
FAM117B
TEKT2
ADPRS
METTL1
CYP27B1
RARA
RAD54L
ZCCHC4
TTC27
DNAJC6
PDE4C
NMNAT1
LZIC
XRN1
TJP3
PSMC2
FAM133B
DNAJC2
SYTL3
SPG21
MRM3
GLOD4
SLC12A9
SLC25A26
RRS1
ADHFE1
YIF1A
TMEM151A
ANTXR1
SMIM5
SLC25A40
DBF4
CBWD3
SLC39A7
RXRB
LTV1
PC
LHFPL4
SPAAR
HRCT1
N6AMT1
ACVR1
KIF18B
SASS6
TIGAR
DMAP1
SCP2
NUP35
ANAPC5
CDKN2C
ASIC3
MRPL3
BCAS3
CYB5A
TSEN54
SLC33A1
GLI4
SDAD1
TRUB2
COQ4
MACC1
PRKAG2
MICAL3
F11R
ZHX2
RNF166
CTU2
C12orf66
FAM72A
CHRNA1
FAM98A
H6PD
ID1
ERG
HUS1
ARHGAP45
SUGCT
NOP16
MPLKIP
HIGD2A
EIF3H
VPS29
RAD9B
DBNDD2
DNAH7
TRIAP1
LRIG1
GPR107
SLC25A45
FRMD8
RTTN
MRPS15
POLR2J
TTC31
CCDC142
MRPS35
UBE2L3
DCAF10
MXI1
LLGL2
FAF1
SYT11
GON4L
PIKFYVE
ATP5F1E
LSG1
CASKIN2
BOD1
C1orf159
FAM240C
PDE4A
SGO2
CKMT1A
GDAP1
SNRPB2
MAD2L2
ELMO1
RAB18
AEBP2
TEAD1
KAT5
INTS7
DTL
SLC45A4
PEDS1-UBE2V1
PEDS1
FAM228B
FAM207A
NTSR2
TFIP11
RBM42
NOL6
ICAM2
RUVBL1
EIF2B3
SYNJ1
GSC2
BNIP1
TSN
WBP1L
RING1
MRPL40
HSD17B8
HIRA
NDUFB3
FAM126B
MRPS18C
HELQ
LRRC46
ANKHD1-EIF4EBP3
ANKHD1
BLCAP
SMIM30
RNF181
PPP2R2C
MRPS23
ANXA5
NOP53
DUSP1
SRRM3
FAM98B
COL23A1
MARCHF8
DZIP3
CIP2A
FRA10AC1
MRPL30
MITD1
WDR70
PSMD3
NUP155
NDUFC2-KCTD14
NDUFC2
RAD51AP1
C12orf4
RDH5
ITGA7
BLOC1S1
CDC73
EXOSC5
BNIP3L
BCKDHA
MFSD14A
ZNF668
ZNF646
TPCN1
IL1R1
PALM2AKAP2
KAT2B
DBNL
ANK1
TAF13
GATAD2A
CWC25
CHSY1
PPCDC
CCDC146
POLR3GL
CCDC77
ANKRD34A
TAMM41
SST
DHX37
BRI3BP
AAR2
C2orf42
ACBD6
ZSWIM8
TBC1D30
GFM2
VPS37D
TMEM181
METTL25
CCDC59
KIF2C
ZNF398
ZDHHC12
WDR4
RGS3
KIAA0895L
EXOC3L1
E2F4
BAIAP2
ATG9B
NEK6
PDE11A
SOGA1
PPP1R18
NRM
TMEM120A
MIS18A
CENPS-CORT
CENPS
TRMT6
MCM8
ST6GAL1
SYNPO
LIX1L
XKR9
UBE2H
LACTB2
CGGBP1
THAP7
DENND2B
TP53I3
SF3B6
PASD1
MAIP1
ZBTB45
MOK
DDX31
RNASEH2C
KCNJ14
GRWD1
CDK7
PTPRH
MTR
KCNN4
CDC25A
C2CD5
CARD8
FBXW8
OSBPL7
OLFML2A
U2SURP
DSTYK
CLK3
E2F6
OGDH
PFDN6
PCNA
EHD1
PIEZO1
FBXO48
APLF
UTP3
SYF2
KDM3A
ZNF546
NFXL1
ANP32E
C10orf88
NGDN
RIPOR3
KMT2D
TICRR
RBM45
ARHGEF12
CLCN3
CUEDC1
RABL2B
C16orf90
CFAP299
IBA57
SLC19A1
WDR24
SMN2
SMN1
GTF2H3
EIF2B1
AEN
KTI12
CDC6
STEAP2
TLE6
SH2B3
ESYT2
NADK2
WIZ
C17orf49
BCL6B
PSME3
BECN1
MOCS3
DPM1
ACVR2A
MPHOSPH10
MCEE
DIAPH1
RGL2
ENTPD4
SNRPE
NUDT15
TBRG4
GTPBP10
RGPD8
RGPD5
KIF15
KIAA1143
HNRNPF
ZFYVE1
PPP1R11
POLR1H
FNBP1
IPO11
DIMT1
ZC3H15
CBWD6
ZNF558
ADAMTS14
SMYD5
NUP42
PNPT1
FAM72B
TYW1
SBDS
SRSF11
DIABLO
MRPL48
NNAT
NAGK
SLC44A1
CEP55
CACNG3
ANKRD12
SEC22B
COPS4
TYW1B
HSPA9
E2F1
CDK11B
CDK11A
OPA1
NIF3L1