ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4313202 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◣ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
SMIM17
STX16
HTR5A
NUP107
CDK5RAP1
COPS7B
PDE6D
XKR7
MTRNR2L2
MSH3
DHFR
FRG2C
NR6A1
TMEM242
SLC39A3
SPATA25
NEURL2
CTSA
COX16
ZNF335
TPH2
SUMF1
SSBP1
NKX1-1
ITGB3BP
EFCAB7
CRBN
METTL15
KIF18A
FANCD2
USP30
SVOP
VPS50
HEPACAM2
MTBP
MRPL13
KCNB1
ZNF668
NUF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
CYB5R1
ARID3B
PVALEF
AATK
SF3A3
RBM48
PEX1
INSM2
INTS12
GSTCD
AHCY
PEX3
ADAT2
HPCA
WDR11
HMGB1
USPL1
C1QTNF1
DUX4
MACC1
TGIF1
TBC1D19
STX18
PIH1D2
NKAPD1
GBA
DLGAP3
HAGH
FAHD1
CCNG2
TNC
LIN28A
HEXA
COMMD2
SUPT7L
SLC4A1AP
MTRNR2L1
TTC26
EIF3F
ZCCHC4
IQSEC3
ENTPD4
MTRNR2L8
TMEM91
TMCC3
NDUFAF5
ESF1
POLR3F
DZANK1
SMG8
SPNS1
ZC3HC1
SLC44A1
COMMD9
PPIP5K2
RPS7
MARCHF4
MSS51
VTA1
NMBR
MRPL44
TRMO
WDR36
MRPL30
MITD1
WASHC2A
PAFAH2
GAMT
PLEKHM3
MTF2
EIF1AD
BANF1
PAXBP1
GFM2
SEC13
FRG2
NDUFB3
FAM126B
FCF1
AREL1
CYB5R4
MRPS18C
HELQ
UTP20
NAGPA
RBM28
DMAP1
TDRKH
KRR1
WBP1L
MUC3A
SH3GLB2
ZNF92
FXN
FAM98B
ATG14
GSX1
SMG7
SERINC2
BLCAP
ARHGAP25
NNAT
ZCCHC7
KYAT1
FAF1
ADNP
LSG1
FMO1
ZDHHC12
NDUFS3
KBTBD4
LAMP1
DOK7
CCDC200
NMNAT1
LZIC
COPS4
TMEM222
YARS1
S100PBP
ZBTB45
CYP27C1
SNAP25
SMARCD2
RAB37
NME1
CHGB
WASHC5
NSMCE2
TACO1
RTTN
GATB
FAM133B
CCAR2
C8orf58
BRF2
POLR2J3
SIGLEC10
SLC24A1
SNRPB2
ALKBH3
VPS11
CBWD5
CBWD3
CBWD6
LURAP1L
MYBPC2
PLAAT5
CPLX2
KIAA0754
GTF3C3
WDR24
SULF1
GRN
WASHC2C
RBBP5
CORO7
IDH3B
CCIN
GADD45A
B3GALT5
SPAAR
LSM5
HRCT1
AVL9
FREM1
KXD1
TSFM
MTERF4
SUGCT
MPLKIP
RPTOR
SEC22B
C12orf73
NUP54
AAR2
RTEL1
STMN3
TRMT6
MCM8
EXOC7
WDR74
MOCS3
DPM1
TRMT5
SLC38A6
NDUFS7
HDAC2
PRRT3
PIGL
NCOR1
FAM24A
ACVR1
MPRIP
HMCN2
WBP1
INO80B
UQCC1
CELA3B
SVIL
KLHL20
NBL1
ATP5F1E
SPOP
RPL27
CGGBP1
AURKAIP1
C3orf38
NOL8
CENPP
INSM1
SCFD2
PFDN4
MYCL
PSEN2
NR1H2
SYF2
VPS37D
SPRED2
INKA2
PLEKHD1
KDM3A
UBFD1
EARS2
SYNPO
ITSN2
RRP15
NUDCD3
TATDN3
NSL1
DRG2
EIF3H
PDE4DIP
COMMD4
OSCAR
NDUFA3
RBM42
LSP1
TESPA1
GRIFIN
PUS10
PEX13
PUM3
TRIP4
ZNF461
TMEM239
C20orf141
TRUB2
COQ4
RNF6
AGTR2
AP5Z1
SPG21
PSMF1
TCTN3
TCF4
SELENOH
TOP3A
SMCR8
REXO4
ADAMTS13
PPP6R1
ALG10
EXOSC3
VPS29
RAD9B
PCOTH
MIPEP
TUT1
SECTM1
TARS2
THEMIS2
STXBP5
GPATCH3
RTF2
PALB2
DCTN5
PTPN1
UBE3B
KCTD10
TFB1M
CWF19L1
VPS25
PEMT
VWC2L
RDH5
ITGA7
BLOC1S1
RCAN1
FRA10AC1
CHST12
SLC33A1
HRH1
RBL1
RHOJ
NUDT14
MPHOSPH10
MCEE
EFHC1
MRPL1
AQR
ANAPC5
LLPH
UTP11
SPATA2
TEFM
IPO4
SCP2
SLC35A3
YTHDF2
TMEM41A
PPT1
SLC1A7
ZNF830
CCT6B
MTIF2
TFPT
PRPF31
KRTAP4-1
ITIH4
MUSTN1
CCDC146
NOXO1
GFER
DHDDS
DNAJC25-GNG10
DNAJC25
METTL1
EEF1AKMT3
PIKFYVE
CYP27B1
POLR3B
CDC7
PSD
FBXL15
NCOA6
TMEM199
POLDIP2
SLC36A1
KAT2B
FAM228B
SF3B6
SCAND1
IQSEC1
SMIM12
MRPL39
KCTD5
TMEM101
MNAT1
ARID5B
TRMT1
NACC1
MRPS31
MED6
SLC12A3
BNIP1
MAIP1
ERAL1
TTI1
RPRD1B
NPEPL1
STBD1
PITHD1
HHIPL2
OPA1
DDX1
LARP4
FAM186A
TMEM120B
ADCYAP1
FHL2
TNNI1
ZCWPW1
MEPCE
WFDC3
DNTTIP1
MEF2D
DPY19L4
YIPF2
TIMM29
JRK
VPS33A
PBK
LRRC59
SLC25A51
TNPO3
SLC25A53
STAT3
MRPL3
HERPUD2
HSPB7
CLCNKA
NFE2L2
METTL2B
CSNK2A3
CDIP1
ELAPOR2
TOMM22
GALK2
COPS2
TOP3B
LSM12
G6PC3
THOC1
UTP25
BCAS3
THAP10
LRRC49
ABAT
DDX18
CSTF1
AURKA
PTCD3
POLR1A
CLPTM1
SFSWAP
ZNF212
SNRPD1
SLC35A4
APBB3
DNAJC24
DCDC1
GSN
RAB14
RRS1
ADHFE1
CDK7
ST7
ATR
HUS1
MRPL16
TOX4
RAB2B
EYA1
SDAD1
METTL25
CCDC59
ZFYVE26
RAD51B
PPWD1
CENPK
C8orf37
MAPKAPK5
AFAP1
COL16A1
NCAM1
VSTM2L
SLN
CCDC107
MFSD1
C2orf49
TACR3
RBM19
FAM117B
CRELD1
SNRPB
NBPF19
NBPF26
NBPF14
ZKSCAN8
GTF3C5
VGLL4
CLUAP1
C16orf90
PCM1
MTERF1
DCAF10
OXNAD1
DPH3
NKAP
CHRDL2
SUN2
ASF1B
FAM107A
EIF2D
GET3
TEX46
KDM1A
PSMB7
LOC101928764
TOR1AIP2
TOR1AIP1
OAZ3
MRPS15
DSTYK
SCNM1
LYSMD1
TSPAN33
OSBPL9
SEMA3D
NEXN
CHCHD2
NBPF1
ZSCAN25
UBE4A
SNX16
MED23
ARHGAP24
INHA
OBSL1
DOCK7
SNAI2
EPHA3
LAS1L
GFRA1
KANSL3
FER1L5
ARHGAP28
GPAM
ALG10B
METTL6
EAF1
GPX4
RPS12
IL26
NCOR2
CWC25
GRWD1
CAV3
ZNF165
ISOC2
LMF1
C10orf88
PTK6
MTMR9
UBE3D
DOP1A
FRMD3
ZNF408
ARHGAP1
CMTM2
MTFR2
PDZRN3
TTC4
PTPRD
ARMC1
SSX2IP
CACNG5
MC2R
RTN4
IZUMO2
PSMD3
CCDC34
LPIN1
POMZP3
TBC1D23
FAM187A
EFTUD2
CCDC103
NDUFS4
SBK2
PCNP
WDR12
CARF
ABCC3
ENTPD2
DGKB
SEMA3A
NYAP2
TCAF2
RBSN
WDPCP
MDH1
NR1H3
ACP2
RASGRP3
UTP3
RPA3
GTPBP10
MTOR
ZSCAN30
CCNI
EIF5AL1
TOR1A
BRIX1
MANBAL
PRPF38A
ORC1
FAM217B
PPP1R3D
TPGS2
MEOX1
PRIMPOL
CASP3
LRRC74A
IPO11
FAM240C
GPATCH4
UBOX5
FASTKD5
HAAO
WNT10A
SNX1
CIAO2A
GDAP1
DARS1
PCYT1A
KANSL1
AMPD3
SLC1A5
GCK
MSL2
RFC1
VPS45
SYTL2
ZMAT2
HPS5
GTF2H1
RNF181
SAP30BP
RECQL5
NOP16
HIGD2A
ARFGEF2
UNKL
RANBP6
SDC4
TMEM205
CCDC159
RAB3D
MDM2
GPSM1
C5orf51
MTMR14
UNC80
RARS1
BORCS7
SCFD1
ZADH2
GLRA1
NSUN4
RAB18
CLASP2
PSMB2
ERMARD
SULF2
TTC32
GOSR1
LTBP1
MMADHC
DNTTIP2
TYW1B
NEK6
TYW3
CRYZ
PROM1
TDRD7
HNRNPD
NOXA1
MTMR6
GOLGA3
KCNMA1
PRPF18
SECISBP2L
EZR
MAP3K7
SERINC3
ZMYM2
LOXL1
PRSS53
HIBADH
GTF2H2C
GTF2H2C_2
PTPRA
PSMD6
MAN2C1
FAM120B
NTSR1
DLL1
SPATA2L
HSPG2
NLE1
DAGLA
DYNC2LI1
DBT
NOTCH2
USP15
PLXNB2
PPP1R1B
FLRT3
TTLL9
PIGK
KCTD9
CDCA2
RLF
SAMD10
PRPF6
VPS13B
PLEKHF1
FBXO43
FBXO8
CEP44
POLR2K
NGDN
SCRN3
CIR1
TTC5
ATP6V1H
ZNF775
COX10
TNFRSF19
GXYLT2
CRNKL1
CFAP61
PSMC2
DNAJC2
TFIP11
NADK2
FAM185A
TMEM230
GMEB2
MAGOHB
ELAC2
LRIF1
ZNFX1
FILIP1
DST
SPTLC1
B4GALT5
RFXANK
BORCS8-MEF2B
BORCS8
DLAT
TMBIM4
RPS20
U2SURP
DCP1A
EMC4
TIGD1
EIF4E2
TANK
PCBP2
BCAR1
KLHL30
TRIAP1
TBRG4
ZAR1L
BRCA2
MRPS33
FZD1
COPS8
AASDH
CLN3
APOBR
INMT
IFT46
ESCO2
CCDC25
TTC21B
ZFYVE27
CORO7-PAM16
GHITM
ARMC8
CREB5
SPART
TLN2
ERBB4
FAM207A
PNPT1
SSBP2
PDGFB
CDC23
ATF3
PSMC1
RPL9
LIAS
MCAT
PSMD9
HPD
NPIPB6
ZNF785
OSGEPL1
TBCK
AIMP1
SMYD1
NAGLU
MRPL12
MYO18B
TAMM41
ARHGEF12
SNRNP25
POLR3K
CDC42EP3
MRPS23
CLK3
ZNF473
VRK3
HIPK1
CRYM
NET1
TM9SF4
CCDC28A
TDRP
RRP12
SYTL3
ERCC1
LARS2
TRPC4AP
STRA6
TRIM62
PRRG2
NOSIP
NME3
MRPS34
EME2
UCHL5
RO60
ZNF142
BCS1L
CHMP1B
CFLAR
SH2D5
CNN3
TRAPPC6A
BLOC1S3
TYW1
SBDS
FAM83D
HSPE1-MOB4
HSPE1
HSPD1
NEUROD4
ENOSF1
CABP7
ST3GAL5
GARS1
ERI1
DUS2
DDX28
RBPJ
LIMCH1
TMEFF2
MC4R
SNRPE
TIMM9
KIAA0586
C3orf14
PUM2
TP53BP1
ABCA7
ERV3-1-ZNF117
ERV3-1
MTREX
DHX29
CCNO
ZNF398
TBPL1
PTDSS2
ZNF425
ANO9
SOD2
WTAP
MICAL3
KAT5
CHD1L
WDR31
WDR3
GDAP2
MED4
UEVLD
PPIL4
MYL12B
GIT2
ANKRD13A
FAM200A
DCTN1
SLC25A26
C2orf42
RGS3
PSMA5
VPS72
GPR146
ARHGAP35
CFAP299
NAPA
REPIN1
UBE2F
PUS1
CEP70
SASS6
CDKAL1
ISY1-RAB43
ISY1
PRELID3A
CTDSP1
POLR1F
SPTAN1
NXPH1
ADRM1
MARCHF9
CDK4
FGF6
EBAG9
SMN2
SMN1
PHF5A
ACO2
FBXO28
ZNF572
ZGPAT
ARFRP1
CIDEC
PTGIS
WDR5
NCBP2AS2
NCBP2
SIRT4
RAG2
IFTAP
TSPAN10
NPLOC4
SLC38A10
ALK
PKMYT1
TMEM238
TMEM190
PNO1
NOL11
RPS27L
ARNT
RRAGC
AKR1B1
CLTCL1
PADI3
FBXL13
ARMC10
CRH
TOM1L2
DRC3
BCAS4
TSR1
SGSM2
SETD5
IL21R
CHMP2B
CELSR3
NOL10
WDR43
ATG101
PERCC1
MED18
MRGBP
SLC43A1
NES
SMIM5
GJA10
EIF3E
NAV2
NCOA1
MORF4L1
MIS12
DERL2
CPNE4
CENPW
MYLK4
METTL2A
ARHGEF1