ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4313202 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◣ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

MAMDC2
NPAS4
ARL4D
SMIM17
DUX4
STX16
NOTCH2NLC
NOTCH2
HTR5A
NUP107
CDK5RAP1
PUSL1
ACAP3
PDE6D
COPS7B
XKR7
PURB
MTRNR2L2
MSH3
DHFR
FRG2C
OLFML2A
NR6A1
TMEM242
SLC39A3
SPATA25
CTSA
NEURL2
COX16
ZSWIM1
ZNF335
TPH2
SUMF1
SSBP1
NKX1-1
ITGB3BP
EFCAB7
CRBN
METTL15
KIF18A
PEDS1-UBE2V1
PEDS1
FANCD2
USP30
SVOP
VPS50
HEPACAM2
BCAR3
MTBP
MRPL13
KRTAP2-4
KCNB1
ZNF668
ZNF646
NUF2
NOTCH2NLB
NOTCH2NLA
CYB5R1
ADIPOR1
ARID3B
PVALEF
AATK
SF3A3
RBM48
PEX1
ZHX2
INSM2
INTS12
GSTCD
EN2
AHCY
PEX3
ADAT2
HPCA
WDR11
HMGB1
USPL1
C1QTNF1
MACC1
TGIF1
TBC1D19
STX18
PIH1D2
NKAPD1
PDE4DIP
HEYL
GBA
DLGAP3
HAGH
FAHD1
CCNG2
TNC
LIN28A
HEXA
COMMD2
DENND2B
AKIP1
SUPT7L
SLC4A1AP
MTRNR2L1
TTC26
EIF3F
ZCCHC4
IQSEC3
ENTPD4
MTRNR2L8
TMEM91
B9D2
TMCC3
NDUFAF5
ESF1
POLR3F
DZANK1
SMG8
SPNS1
LAT
CADM2
RHEBL1
ZC3HC1
SLC44A1
P2RY1
PRR5L
COMMD9
FSCN2
PPIP5K2
RPS7
MARCHF4
FGGY
B3GLCT
MSS51
VTA1
NMBR
MRPL44
TRMO
WDR36
MRPL30
MITD1
ITM2C
WASHC2A
PAFAH2
DAZAP1
GAMT
PLEKHM3
MTF2
EIF1AD
CST6
BANF1
MYLK2
PAXBP1
GFM2
SEC13
FRG2
NDUFB3
FAM126B
FCF1
AREL1
RIPPLY2
CYB5R4
PRRC2B
MRPS18C
HELQ
UTP20
NAGPA
C1QTNF2
RBM28
DMAP1
TDRKH
WBP1L
KRR1
MUC3A
SH3GLB2
PGAP3
ERBB2
PNMT
RINL
SYN2
ZNF92
FXN
FAM98B
C22orf31
ATG14
LNX1
TGFB2
GSX1
SMG7
SERINC2
BLCAP
NNAT
ARHGAP25
ZCCHC7
KYAT1
CDKN2C
FAF1
ADNP
LSG1
FMO1
ZDHHC12
NDUFS3
KBTBD4
FAM180B
LAMP1
DOK7
CCDC200
NMNAT1
LZIC
COPS4
FOXN3
TMEM222
SCHIP1
YARS1
S100PBP
ZBTB45
SLC27A5
CYP27C1
SNAP25
SMARCD2
RAB37
NME1
CHGB
WASHC5
NSMCE2
TACO1
RTTN
GATB
FAM133B
CCAR2
C8orf58
BRF2
MFSD2A
POLR2J3
SIGLEC10
SLC24A1
SNRPB2
BNIP3L
ALKBH3
IFIT1
VPS11
CBWD5
CBWD3
CBWD6
LURAP1L
MYBPC2
PLAAT5
CPLX2
LMCD1
KIAA0754
GTF3C3
C2orf66
GPR61
PPCDC
WDR24
STUB1
JMJD8
SULF1
GRN
WASHC2C
RBBP5
CORO7-PAM16
CORO7
IDH3B
CCIN
GADD45A
B3GALT5
DOCK10
POFUT2
SPAAR
HRCT1
LRIG1
LSM5
AVL9
FREM1
KXD1
MTERF4
TSFM
EEF1AKMT3
SUGCT
MPLKIP
RPTOR
SEC22B
TDG
C12orf73
NUP54
AAR2
STMN3
RTEL1
TRMT6
MCM8
EXOC7
WDR74
STX5
RGMB
MOCS3
DPM1
TRMT5
SLC38A6
NDUFS7
ZNF285
HDAC2
PRRT3
PIGL
NCOR1
FAM24A
ACVR1
MPRIP
CDRT4
HMCN2
WBP1
INO80B
UQCC1
RPL24
CELA3B
SEMA5B
SVIL
KLHL20
NBL1
ATP5F1E
PRELID3B
LOC102724770
DGCR6
ADGRF3
ENGASE
SPOP
IFI35
RPL27
TSPAN33
CGGBP1
AURKAIP1
C3orf38
CENPP
NOL8
INSM1
XRN1
SCFD2
CEP68
PFDN4
MYCL
PSEN2
POLD1
NR1H2
SYF2
CELA2B
CPA2
SPRED2
VPS37D
RASL11B
INKA2
PLEKHD1
PROM1
KDM3A
UBFD1
EARS2
SYNPO
ITSN2
FRG2B
RRP15
CDC14B
NUDCD3
TATDN3
NSL1
DRG2
EIF3H
UBE2V1
COMMD4
OSCAR
NDUFA3
RBM42
KREMEN1
SPINT2
GRIFIN
LSP1
PLPPR1
TESPA1
PUS10
PEX13
PUM3
TRIP4
PCLAF
RBM20
ZNF461
TMEM239
C20orf141
TRUB2
COQ4
RNF6
AGTR2
DBNDD2
AP5Z1
SPG21
PSMF1
TCTN3
TCF4
SELENOH
ARID3A
ADAMTS13
TOP3A
SMCR8
REXO4
VASH2
PPP6R1
ALG10
EXOSC3
PROX1
VPS29
RAD9B
PCOTH
MIPEP
C1QTNF9B
TUT1
MTA2
SECTM1
TARS2
THEMIS2
STXBP5
TMEM61
GPATCH3
GPN2
CAND1
RTF2
PALB2
DCTN5
PTPN1
UBE3B
KCTD10
PHC2
ERFE
TFB1M
WNK4
VPS25
CWF19L1
HMGA2
PEMT
CEACAM21
VWC2L
RDH5
ITGA7
BLOC1S1
RCAN1
FRA10AC1
CHST12
SLC33A1
HRH1
NAV2
RBL1
JAG2
RHOJ
NUDT14
MPHOSPH10
MCEE
EFHC1
GAS1
DBNL
MRPL1
AQR
ANAPC5
LLPH
FHL3
UTP11
SPATA2
TEFM
TM9SF1
IPO4
SCP2
SLC35A3
YTHDF2
TMEM41A
PPT1
SLC1A7
ZNF830
CCT6B
MTIF2
ADAMTS14
TFPT
PRPF31
CHMP1B
PTGIS
CDH22
KRTAP9-1
KRTAP4-2
KRTAP4-1
MUSTN1
ITIH4
CCDC146
NOXO1
SYNGR3
GFER
DHDDS
DNAJC25-GNG10
DNAJC25
METTL1
CYP27B1
PIKFYVE
POLR3B
CDC7
PSD
FBXL15
NCOA6
SEBOX
TMEM199
POLDIP2
SLC36A1
RNF183
FAM228B
KAT2B
TP53I3
SF3B6
SCAND1
IQSEC1
TMEM101
SMIM12
MRPL39
KCTD5
MNAT1
BAHCC1
ARID5B
MYOM3
TRMT1
NACC1
MED6
MRPS31
TMEM63C
SLC12A3
BNIP1
MAIP1
ERAL1
ERCC2
TTI1
RPRD1B
NPEPL1
STBD1
BCAM
PITHD1
HHIPL2
OPA1
DDX1
LARP4
FAM186A
TMEM120B
RBPJ
ADCYAP1
FHL2
TNNI1
PPP1R35
ZCWPW1
MEPCE
WFDC3
DNTTIP1
MEF2D
STAT1
DPY19L4
JRK
YIPF2
TIMM29
VPS33A
PBK
LRRC59
SLC25A51
ARHGEF10L
TNPO3
SLC25A53
FAM199X
STAT3
MRPL3
RBFOX2
HERPUD2
EPB41L3
HSPB7
CLCNKA
NFE2L2
METTL2B
PRSS47
CSNK2A3
CDIP1
ELAPOR2
TOMM22
GALK2
COPS2
TOP3B
LSM12
G6PC3
THOC1
WNT10A
UTP25
BCAS3
THAP10
LRRC49
ABAT
DDX18
CSTF1
AURKA
APOC2
PTCD3
POLR1A
CLPTM1
BMERB1
NPY
SFSWAP
SLITRK3
ZNF212
SNRPD1
SYT8
SRA1
SLC35A4
APBB3
DNAJC24
DCDC1
TBC1D2B
GSN
RAB14
RRS1
ADHFE1
CDK7
ST7
CNTN6
ATR
HUS1
PPP2R2C
MRPL16
TOX4
RAB2B
NME9
EYA1
TP53AIP1
MRAS
AFAP1
SDAD1
METTL25
CCDC59
ZFYVE26
RAD51B
PPWD1
CENPK
C8orf37
MAPKAPK5
COL16A1
NCAM1
VSTM2L
SLN
SIT1
CCDC107
ARHGEF39
MFSD1
ZNF385A
TGFBRAP1
C2orf49
TACR3
RBM19
FAM117B
CRELD1
SNRPB
NBPF19
NBPF26
NBPF14
ZKSCAN8
GTF3C5
C16orf90
VGLL4
CLUAP1
PCM1
MTERF1
OR6M1
DCAF10
OXNAD1
DPH3
NKAP
ZNF229
CHRDL2
SUN2
ASF1B
FAM107A
HIF3A
EIF2D
TEX46
GET3
KDM1A
PSMB7
LOC101928764
TOR1AIP2
TOR1AIP1
OAZ3
MRPS15
DSTYK
TNFAIP8L2-SCNM1
TNFAIP8L2
TMOD4
SCNM1
LYSMD1
OSBPL9
RIPOR2
ABCA4
SEMA3D
NEXN
CHCHD2
NUPR2
ECT2L
NBPF1
ZSCAN25
UBE4A
SNX16
RAP1GAP
MED23
OBSL1
ANKS6
ARHGAP24
INHA
DOCK7
SNAI2
EPHA3
LAS1L
GFRA1
TMEM262
KANSL3
FER1L5
GPAM
ARHGAP28
ALG10B
PCDHB1
SIRT2
NFKBIB
GPX4
POLR2E
METTL6
EAF1
RPS12
IL26
NCOR2
CWC25
KCNJ14
GRWD1
NOTUM
PLD3
CAV3
FILIP1
ZNF165
OR1F12
ISOC2
GUCA2B
SOX8
LMF1
C10orf88
PTK6
ZNF205
MTMR9
UBE3D
DOP1A
LRFN4
FRMD3
ZNF408
ARHGAP1
TMSB10
BRD3
CMTM2
SELENOW
MTFR2
PDZRN3
TTC4
SPON2
PTPRD
ARMC1
SSX2IP
CACNG5
MC2R
RTN4
NPPC
IZUMO2
PSMD3
CCDC34
ZKSCAN2
LPIN1
POMZP3
TBC1D23
SBK3
FAM187A
EFTUD2
CCDC103
SBK2
NDUFS4
LGI2
PCNP
HABP2
SPRY1
ENTPD2
ITGB2
ABCC3
WDR12
CARF
ADGRF1
DGKB
CT55
SEMA3A
NYAP2
TCAF2
RBSN
WDPCP
MDH1
NR1H3
ACP2
RASGRP3
UTP3
RPA3
GTPBP10
MTOR
ZSCAN30
CCNI
EIF5AL1
TOR1A
BRIX1
MANBAL
PRPF38A
ORC1
SYCP2
PPP1R3D
FAM217B
TPGS2
MEOX1
LRRC74A
PRIMPOL
CASP3
FAM240C
IPO11
DIMT1
NAXE
GPATCH4
HAAO
UBOX5
FASTKD5
CHN1
C1orf162
SNX1
CIAO2A
GDAP1
PCYT1A
DARS1
MYEOV
KANSL1
AMPD3
SLC1A5
GCK
MSL2
RFC1
VPS45
RNF181
TMEM150A
ZMAT2
HARS2
HARS1
SYTL2
BRF1
HPS5
GTF2H1
BTBD6
ZNF555
SAP30BP
RECQL5
NOP16
HIGD2A
UNKL
ARFGEF2
RANBP6
KIAA2026
SDC4
GPSM1
TMEM205
CCDC159
CEACAM16
RAB3D
MDM2
ID1
C5orf51
MTMR14
UNC80
RARS1
BORCS7
SCFD1
COL8A1
FNDC1
ZADH2
TSHZ1
GLRA1
NSUN4
RAB18
CLASP2
PCIF1
PSMB2
TTC32
ERMARD
SULF2
ZNF581
ZNF580
GOSR1
LTBP1
MMADHC
DNTTIP2
SYNJ2
NEK6
TYW1B
TYW3
CRYZ
TDRD7
HNRNPD
NOXA1
TMEM167B
MTMR6
MLLT6
GOLGA3
KCNMA1
PRPF18
ZNRF2
SECISBP2L
EZR
MAP3K7
PKIG
VKORC1
PRSS53
SERINC3
LOXL1
ZMYM2
HIBADH
GTF2H2C
GTF2H2C_2
ADGRA1
PTPRA
SPTAN1
PSMD6
RIPOR3
MAN2C1
FAM120B
NTSR1
ZNF280A
JARID2
HSPG2
DLL1
SPATA2L
UNC45B
NLE1
BHLHE40
DAGLA
DYNC2LI1
DBT
KIF17
IYD
USP15
PLXNB2
PPP1R1B
FLRT3
TTLL9
DUSP15
PIGK
KCTD9
CDCA2
SAMD10
PRPF6
RLF
VPS13B
PLEKHF1
POLR2K
FBXO43
SPAG1
FBXO8
CEP44
NGDN
SCRN3
CIR1
REPIN1
RGS20
TTC5
ATP6V1H
ZNF775
COX10
TNFRSF19
ZNFX1
GXYLT2
EAPP
CRNKL1
CFAP61
PSMC2
DNAJC2
TFIP11
PCNA
NADK2
TMEM230
GMEB2
FAM185A
MAGOHB
ELAC2
PLXNB1
LRIF1
DST
SPTLC1
B4GALT5
RXRG
RFXANK
BORCS8-MEF2B
BORCS8
DLAT
TMBIM4
RPS20
TBC1D2
ESPNL
U2SURP
EHD1