ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX4313202 | RH-4
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◣ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
STX16
HTR5A
NUP107
CDK5RAP1
COPS7B
XKR7
MTRNR2L2
NR6A1
TMEM242
SLC39A3
NEURL2
CTSA
COX16
ZNF335
TPH2
SUMF1
SSBP1
ITGB3BP
EFCAB7
CRBN
FANCD2
SVOP
VPS50
HEPACAM2
MTBP
MRPL13
KCNB1
ZNF668
NUF2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
PVALEF
AATK
SF3A3
RBM48
PEX1
INTS12
GSTCD
AHCY
PEX3
ADAT2
HPCA
WDR11
HMGB1
USPL1
C1QTNF1
TBC1D19
STX18
PIH1D2
NKAPD1
GBA
HAGH
FAHD1
CCNG2
TNC
HEXA
COMMD2
SUPT7L
SLC4A1AP
TTC26
EIF3F
ZCCHC4
IQSEC3
MTRNR2L8
NDUFAF5
ESF1
POLR3F
DZANK1
SMG8
SPNS1
ZC3HC1
SLC44A1
COMMD9
PPIP5K2
RPS7
MARCHF4
MSS51
VTA1
NMBR
MRPL44
TRMO
WDR36
MRPL30
MITD1
WASHC2A
PAFAH2
GAMT
PLEKHM3
MTF2
EIF1AD
BANF1
PAXBP1
GFM2
SEC13
NDUFB3
FAM126B
FCF1
AREL1
CYB5R4
MRPS18C
HELQ
UTP20
NAGPA
RBM28
DMAP1
TDRKH
KRR1
WBP1L
FXN
FAM98B
ATG14
GSX1
SMG7
ZCCHC7
KYAT1
FAF1
LSG1
ZDHHC12
NDUFS3
KBTBD4
LAMP1
CCDC200
NMNAT1
LZIC
COPS4
TMEM222
YARS1
S100PBP
ZBTB45
SNAP25
SMARCD2
RAB37
NME1
CHGB
WASHC5
NSMCE2
TACO1
RTTN
GATB
FAM133B
CCAR2
BRF2
POLR2J3
SLC24A1
SNRPB2
ALKBH3
VPS11
CBWD5
CBWD3
CBWD6
MYBPC2
PLAAT5
CPLX2
GTF3C3
WDR24
SULF1
GRN
WASHC2C
RBBP5
IDH3B
B3GALT5
HRCT1
FREM1
KXD1
TSFM
MTERF4
SUGCT
MPLKIP
RPTOR
C12orf73
NUP54
AAR2
TRMT6
MCM8
STMN3
WDR74
MOCS3
DPM1
TRMT5
SLC38A6
NDUFS7
HDAC2
PRRT3
PIGL
ACVR1
MPRIP
INO80B
UQCC1
KLHL20
ATP5F1E
SEC22B
SPOP
RPL27
CGGBP1
AURKAIP1
C3orf38
NOL8
CENPP
SCFD2
USP30
PFDN4
NR1H2
SYF2
VPS37D
PLEKHD1
KDM3A
UBFD1
EARS2
RRP15
NUDCD3
DRG2
EIF3H
TATDN3
NSL1
PDE4DIP
COMMD4
OSCAR
NDUFA3
RBM42
PUS10
PEX13
PUM3
TRIP4
ZNF461
C20orf141
TRUB2
COQ4
RNF6
AP5Z1
TCTN3
PSMF1
TCF4
SELENOH
TOP3A
SMCR8
REXO4
PPP6R1
ALG10
EXOSC3
VPS29
RAD9B
PCOTH
MIPEP
TUT1
TARS2
STXBP5
GPATCH3
RTF2
PALB2
DCTN5
PTPN1
UBE3B
KCTD10
TFB1M
CWF19L1
VPS25
PEMT
VWC2L
BLOC1S1
RCAN1
FRA10AC1
CHST12
SLC33A1
RBL1
RHOJ
MPHOSPH10
MCEE
MRPL1
AQR
ANAPC5
LLPH
UTP11
SPATA2
TEFM
IPO4
SCP2
SLC35A3
YTHDF2
TMEM41A
PPT1
ZNF830
CCT6B
MTIF2
TFPT
PRPF31
KRTAP4-1
MUSTN1
CCDC146
NOXO1
DHDDS
METTL1
EEF1AKMT3
DNAJC25-GNG10
DNAJC25
PIKFYVE
POLR3B
CDC7
PSD
NCOA6
TMEM199
POLDIP2
SLC36A1
FAM228B
SF3B6
KAT2B
SCAND1
SMIM12
MRPL39
TMEM101
MNAT1
KCTD5
ARID5B
TRMT1
MRPS31
MED6
BNIP1
MAIP1
ERAL1
TTI1
RPRD1B
NPEPL1
BLCAP
PITHD1
HHIPL2
OPA1
DDX1
ADCYAP1
FHL2
FAM186A
ZCWPW1
MEPCE
WFDC3
DNTTIP1
DPY19L4
YIPF2
TIMM29
JRK
VPS33A
PBK
LRRC59
SLC25A51
TNPO3
SLC25A53
STAT3
MRPL3
HSPB7
NFE2L2
METTL2B
CDIP1
TOMM22
GALK2
COPS2
TOP3B
G6PC3
THOC1
UTP25
BCAS3
THAP10
LRRC49
DDX18
CSTF1
AURKA
PTCD3
POLR1A
CLPTM1
SFSWAP
ZNF212
SNRPD1
SLC35A4
APBB3
DNAJC24
DCDC1
GSN
RAB14
RRS1
CDK7
ST7
ATR
HUS1
MRPL16
TOX4
RAB2B
EYA1
SDAD1
METTL25
CCDC59
ZFYVE26
PPWD1
CENPK
C8orf37
MAPKAPK5
AFAP1
NCAM1
CCDC107
MFSD1
C2orf49
TACR3
RBM19
FAM117B
CRELD1
SNRPB
GTF3C5
CLUAP1
PCM1
MTERF1
DCAF10
OXNAD1
DPH3
NKAP
RTEL1
EIF2D
GET3
KDM1A
PSMB7
LOC101928764
TOR1AIP1
OAZ3
MRPS15
DSTYK
SCNM1
LYSMD1
TSPAN33
OSBPL9
SEMA3D
NEXN
CHCHD2
NBPF1
ZSCAN25
UBE4A
SNX16
MED23
OBSL1
INHA
DOK7
DOCK7
EPHA3
LAS1L
GFRA1
KANSL3
GPAM
ALG10B
METTL6
EAF1
RPS12
NCOR2
CWC25
GRWD1
CAV3
ZNF165
ISOC2
C10orf88
PTK6
MTMR9
DOP1A
ZNF408
ARHGAP1
MTFR2
TTC4
PTPRD
PDZRN3
ARMC1
ARHGAP24
SSX2IP
MC2R
RTN4
PSMD3
POMZP3
TBC1D23
EFTUD2
CCDC103
NDUFS4
SBK2
PCNP
WDR12
CARF
SEMA3A
NYAP2
RBSN
WDPCP
MDH1
NR1H3
ACP2
RASGRP3
UTP3
RPA3
GTPBP10
MTOR
ZSCAN30
CCNI
TOR1A
BRIX1
MANBAL
PRPF38A
ORC1
FAM217B
PPP1R3D
TPGS2
IPO11
GPATCH4
UBOX5
FASTKD5
FAM240C
SNX1
GDAP1
DARS1
PCYT1A
KANSL1
AMPD3
MSL2
SLC1A5
RFC1
VPS45
ZMAT2
SYTL2
HPS5
GTF2H1
RNF181
SAP30BP
RECQL5
NOP16
HIGD2A
ARFGEF2
RANBP6
SDC4
MDM2
GPSM1
C5orf51
MTMR14
UNC80
BORCS7
RARS1
SCFD1
GLRA1
NSUN4
RAB18
CLASP2
PSMB2
ERMARD
TTC32
SULF2
GOSR1
LTBP1
MMADHC
DNTTIP2
TYW3
CRYZ
TYW1B
TDRD7
HNRNPD
NOXA1
MTMR6
GOLGA3
KCNMA1
PRPF18
SECISBP2L
MAP3K7
SERINC3
ZMYM2
HIBADH
GTF2H2C
GTF2H2C_2
PTPRA
PSMD6
MAN2C1
NLE1
DYNC2LI1
DBT
NOTCH2
USP15
FLRT3
TTLL9
PIGK
KCTD9
CDCA2
RLF
PRPF6
VPS13B
FBXO8
CEP44
POLR2K
NGDN
SCRN3
CIR1
TTC5
ATP6V1H
ZNF775
COX10
TNFRSF19
CRNKL1
CFAP61
TFIP11
NADK2
DNAJC2
FAM185A
TMEM230
MAGOHB
ELAC2
LRIF1
ZNFX1
FILIP1
DST
SPTLC1
RFXANK
BORCS8-MEF2B
BORCS8
DLAT
TMBIM4
RPS20
U2SURP
DCP1A
EMC4
TIGD1
EIF4E2
TANK
PCBP2
BCAR1
TRIAP1
TBRG4
ZAR1L
BRCA2
MRPS33
FZD1
COPS8
AASDH
CLN3
INMT
IFT46
ESCO2
TTC21B
ZFYVE27
CORO7-PAM16
CORO7
GHITM
ARMC8
SPART
TLN2
FAM207A
PNPT1
SSBP2
CDC23
PSMC1
RPL9
LIAS
ELAPOR2
MCAT
PSMD9
HPD
ZNF785
OSGEPL1
TBCK
AIMP1
NAGLU
MRPL12
SMYD1
TAMM41
ARHGEF12
SNRNP25
POLR3K
CDC42EP3
CLK3
MRPS23
ZNF473
VRK3
HIPK1
TM9SF4
NET1
CCDC28A
RRP12
LARS2
TRIM62
PRRG2
NOSIP
SYTL3
MRPS34
EME2
STRA6
UCHL5
RO60
ZNF142
BCS1L
CHMP1B
CFLAR
SH2D5
CNN3
TRAPPC6A
BLOC1S3
SBDS
FAM83D
HSPE1-MOB4
HSPE1
HSPD1
TYW1
NEUROD4
ENOSF1
GARS1
ST3GAL5
ERI1
DUS2
DDX28
RBPJ
LIMCH1
TMEFF2
MC4R
SNRPE
TIMM9
KIAA0586
C3orf14
ERV3-1-ZNF117
ERV3-1
MTREX
DHX29
ZNF398
TBPL1
ZNF425
SOD2
WTAP
KAT5
CHD1L
WDR31
WDR3
GDAP2
MED4
UEVLD
PPIL4
MYL12B
FAM200A
DCTN1
CREB5
SLC25A26
C2orf42
PSMA5
VPS72
ARHGAP35
CFAP299
NAPA
REPIN1
PUS1
UBE2F
CEP70
SASS6
CDKAL1
ISY1-RAB43
ISY1
POLR1F
NXPH1
ADRM1
CDK4
CTDSP1
EBAG9
SMN2
SMN1
PHF5A
ACO2
FBXO28
ZNF572
ZGPAT
ARFRP1
NCBP2AS2
NCBP2
SIRT4
IFTAP
TSPAN10
NPLOC4
PNO1
NOL11
RPS27L
ARNT
RRAGC
AKR1B1
FBXL13
ARMC10
TOM1L2
DRC3
TSR1
SGSM2
CHMP2B
IL21R
CELSR3
NOL10
WDR43
PERCC1
ATG101
MED18
SLC43A1
SMIM5
GJA10
EIF3E
NAV2
NCOA1
MORF4L1
MIS12
DERL2
CENPW
CPNE4
METTL2A
SYT14
ARHGEF1
ABLIM1
MARCHF11
DHX35
MYLK4
ZBTB40
POLR3D
OGT
CYSTM1
MRPL35
KREMEN2
SSNA1
ANAPC2
YJU2
POLI
VGF
MYO18A
SORBS1
SSTR5
RPF1
BRPF1
SLC25A34
H6PD
H4C14
H4C15
OSBPL7
LAMTOR3
UFM1
RNF186
RUVBL1
CCNC
CCDC102B
C16orf91
SEM1
NCBP3
BBS10
KRTAP5-3
ZNF555
CPPED1
C12orf66
CDK11B
CDK11A
PIGU
BMS1
SMARCAD1
CFAP410
POLE4
CLDN15
CNPPD1
RETREG2
TMEM181
ZNF391
C18orf21
ZNF383
RPL6
DR1
CENPE
BTG2
RPS14
ATP8A1
RPL29
COMMD1
CBLB
ZNF721
PIGG
NBAS
STK36
RNF25
TBL3
BCAP29
PSMD1
STAC3
TAF13
GTF2H2
NSG2
RWDD1
NDC80
METTL4
OPRD1
SH2D7
INO80C
DYSF
VPS41
EVI5
EIF2B5
HNRNPH2
GLA
OR51T1
LRRC17
ZMPSTE24
YBEY
LMAN2
MCM3AP
CCT2
RMND1
ARMT1
HECTD3
GOSR2
C11orf52
ALK
ADAMTS17
TVP23B
SOGA1
TMEM203
NDOR1
MYH7B
GSS
RPL26L1
TSEN54
CASKIN2
MTR
RAD18
VAC14
PEX12
CMSS1
DAB1
EML2
TRAPPC3
OMA1
ODF2L
STXBP4
COX11
RPS15A
MAP7D1
EBNA1BP2
CFAP57
EXD2
ARL14EP
TRPM3
COX7A2
C9orf85
ABHD17B
MGRN1
WRN
CDK2AP1
PURG
ZNF598
LOC100996750
KRTAP4-7
NUP214
TSN
LRRC29
METTL9
NUDT9
BOD1L1
CDCA7
CYP24A1
NHLH2
C8orf33
KLHL12
SH2B1
RPL5
ATG7
TUFM
RAD50
C18orf25
TUBE1
FAM229B
RPL11
FGL2
USP35
KCTD21
EIF2S1
ATP6V1D
HNRNPA1L2
BAZ2B
ATRN
ELOVL1
PSMA4
FARSB
ATF7-NPFF
ATF7
PRR5
GADD45B
EIF3K
DMPK
RPL21
PRR5-ARHGAP8
MRPS9
ZNF155
KRTAP4-2
JMJD1C
TEX10
NKIRAS1
ERLEC1
ASB3
MED28
RPL15
GSPT1
CXorf56
ZNF777
ZNF77
SEC31A
THAP9
STAG1
EIF2B3
SF3B5
NUP42
CAND1
TPRKB
ERCC1
H4C11