ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX190281 | MCF-7
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◢ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◣ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

TDRD7
NPAS4
MTRNR2L2
ZEB1
LIX1L
HTR5A
RBBP8NL
GSN
RAB14
MTRNR2L8
FAM227B
DTWD1
CPLX2
GSTP1
XKR7
BARHL1
IQSEC3
ALDH3B2
STX16
PGAM5
TTLL4
OVOL2
PSMD6
WDR74
KCTD18
LSMEM1
GBA
SLC45A4
CDC42SE1
TIPARP
PFDN4
DCLRE1B
AP4B1
SMG8
PIP5K1A
SVOP
RTN4
GRHL2
CBLL1
OVOL1
CALB1
RGPD2
RGPD1
TMED9
MTDH
TACO1
TPD52L1
CYB5R4
FAM83A
NME1
TET3
CFAP54
ATF7IP
BATF
SYNE2
P4HA1
HIBADH
CCDC200
UPK3BL1
TPH2
IFT46
EBAG9
PDE4DIP
TEAD1
TRIM37
PRRC2B
SMARCD2
RBBP5
ERP27
C3orf14
FRMD3
KCNH6
ANP32E
NSG2
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
NEMF
SNAP25
EPN3
USP32
APPBP2
SMIM30
DPY19L4
RRP15
FGF12
FBXO34
KCTD3
DNAJC2
COMMD2
DNAJC5
WASHC5
NSMCE2
GLRA1
STEAP2
INTS12
GSTCD
MACROD1
NT5DC3
FRA10AC1
GPR158
ZNF76
SRI
BCAS3
CDT1
CHD1L
PRKAB2
NEUROD4
ADAMTS17
POLR3H
NDUFS3
KBTBD4
RING1
POT1
L1CAM
RNF43
BRIP1
TMPRSS13
UBE2O
AANAT
TSFM
GTF3C3
NRAS
ZNF572
GTPBP10
VPS45
MNAT1
PIEZO1
MTA3
KCNG3
GLI4
CA2
MAZ
NR2F2
ZNF276
VPS9D1
HEATR6
UPK3BL2
C17orf49
TRIB1
COX16
IPO4
CFAP69
PRPF18
SEC62
CEP170
RGS9
SDCCAG8
SLC33A1
WASHC2C
FKBP4
MTRNR2L9
TRIP4
PDZK1
FERMT2
PWWP2A
NDUFC2-KCTD14
NDUFC2
DSTYK
CRYBG1
MARCHF11
CIB3
HIPK1
RGL1
ARPC5
VWC2L
DNAJC25-GNG10
DNAJC25
G6PC3
AMZ2
MRI1
TARS2
LRRC37A3
CERCAM
CCDC88A
GON4L
SYT11
CLK3
ANKRD34C
SNTG1
FAM98A
LRP12
IGSF3
CDS1
BNIP1
AP4E1
RNF187
MRPS23
WWC3
MARCHF4
SMIM6
RPS7
NFE2L2
BEND3
STARD10
ZNF750
ADGRF4
KRTAP3-1
GATAD2A
RASGRP1
FAM133B
HK1
KIAA1586
ARFGEF2
GOLGA7B
SALL4
METTL17
VPS33A
EIF1AD
BANF1
TMEM167B
MED13
LRATD2
PKDCC
CAPS2
TMPRSS11F
MTFR2
EIF5B
TXNDC9
NFATC4
WASHC2A
SOD2
WTAP
PPM1D
PIGL
TMEM9
GLIPR1L2
TTC5
DHX40
ANTXR1
NCOA3
EXD2
CFAP45
PROM2
SLC44A1
CAMTA1
KIAA0895
NOTCH2
USP30
ANLN
PPM1H
TUFT1
PLA2G4B
RC3H2
FANCD2
POLR2J3
VIM
SEPTIN9
SNRPG
MFAP4
MIPOL1
CLTC
DGKE
C17orf67
ZBTB42
UCHL5
RO60
VIRMA
TEX14
RAD51C
TMTC2
KDM1A
MRPL44
MED23
PEX3
ADAT2
HIF1A
SIKE1
PCDH1
IGSF9
ASF1A
RBM19
DDX18
TTF2
ANKRD36C
WIPI1
LSG1
PPFIBP2
THAP10
LRRC49
METTL2A
PGBD5
SEC24B
RNFT1
TTC26
MIS18BP1
SLC35A4
APBB3
FNIP2
GLIPR1L1
COMMD4
ZNF609
FA2H
DHRS13
STMN3
RTF2
FAM117B
FAM72C
FAM72A
EPS8
FAF1
TFAP2C
TMEM248
POM121
SEC13
TMEM242
RNF224
MFSD14A
CSK
BFSP1
DENND2C
PRR15L
ADARB1
NBN
MINK1
ACP6
ANXA9
ATP6V0A4
PSEN2
VPS72
IFRD1
DRAP1
C11orf68
VEPH1
BCAS1
MALL
CRBN
LRRC59
SSTR5
ZC3H6
PPM1E
PLS1
SNRPE
TMEM41A
RAPGEF6
ALG10B
ATR
FBXO4
NDUFAF5
ESF1
ANKRD12
GTF2H2
FAM217B
ATP5MPL
SYCP2
SLC24A1
DDX59
CST6
CHRM4
PRSS22
MTERF4
EIF4ENIF1
KRT8
CCN5
IL20
ATP5F1E
SLC25A21
ITGB2
PTGR2
LARP1
HEXA
TUBD1
RPS6KB1
WDR36
NR1H3
ACP2
FSD1L
RBL2
SSBP1
CCNB1
PCBP3
LPCAT3
MAPK8IP2
RRM2B
TRIQK
NPDC1
BNIPL
FKBP7
C3orf33
CHRNB2
TBX2
FAM72B
YBEY
MCM3AP
MRPS18C
HELQ
ZER1
LAMA3
DRG2
FAM207A
ARHGEF17
MAPK6
KCNK12
CD14
PAFAH2
DCUN1D2
CCNC
CALM1
NIPSNAP1
NUF2
CDK5RAP1
UFSP1
C12orf66
DIAPH1
PARL
NAPEPLD
UNKL
ANKRD36
RDH11
TLE3
PLEKHM3
NOL8
CENPP
NUP107
MTF2
SYPL1
BLM
MGP
CSTF1
AURKA
NSUN4
DSCC1
WDR31
C11orf49
EIF2D
OPA1
FBXL13
ARMC10
RPAP3
PIP4P2
SYT1
NUP54
POLR3B
EIF3E
HES1
ZNF555
SMIM5
ZSCAN25
PMPCB
KDM2A
HES3
KANSL3
ANO6
PPP4R3A
EIF2AK2
C1QTNF9
NOL11
ZKSCAN5
AARS2
B3GNT2
UTP20
SLC25A51
FBXO33
OAZ3
JAK2
STX8
CFAP52
VMP1
PTRH2
MTBP
MRPL13
UNK
MDP1
SGMS2
RINT1
NEIL3
NSUN3
DHFR2
NPPB
AEBP2
RNF166
CTU2
PRCP
DDIAS
VTA1
NMBR
DPF1
CEP128
DNMBP
MAN1B1
THEM4
MESP1
SGO1
COA1
CALM2
SLC1A5
QTRT1
SMIM12
SLC25A24
MAPK10
HEBP2
CEP170B
SBDS
RANBP2
PSMC1
SNX8
POU5F1
WDR35
NET1
PERCC1
GDPD1
NAGPA
FBRS
HUS1
PIKFYVE
KPNB1
CYP4F3
SFI1
ETS2
SCFD2
RGPD8
RGPD5
AJUBA
KYAT1
IDH1
ERG
YIF1A
E2F6
SCNM1
LYSMD1
SELENOM
AMBRA1
ARHGAP45
ZNF546
ALG10
KLHL12
OTUD7B
SLAIN2
TRIAP1
FBXO32
LDAH
PPP1CB
PARP2
RABGGTA
HMGB1
USPL1
ZC3H15
ZSCAN22
ATP6V1C1
PFKM
SENP1
RBSN
TRIM52
C1orf174
TFF3
KHK
REXO4
REV1
ESYT2
FAHD2A
ADCK1
LPIN3
MAP3K20
SKOR1
FAM98B
DSTN
VTCN1
SNRPB2
TAF3
NTAQ1
IKBKG
ATG14
MTIF2
DLGAP5
ZFAT
ZNF669
CRIP2
KLHL20
ZNF165
RNF19A
BAIAP2
CSDE1
STX18
SEC22B
PLCXD2
WWOX
ACTR10
NAALADL2
PUS10
PEX13
DNAH7
NOXA1
ZNF410
FMO5
ZNF212
C1QBP
GOLGA7
WDR11
MRPL3
CTNNB1
TIMM23
DNPEP
FAM72D
DCTPP1
KDM5B
MTERF1
IST1
CDC14B
PNPLA7
TGM1
SYT5
IRF9
SEC11A
ATOX1
PPM1B
DYSF
SPEF2
MAX
SLC25A32
DCAF13
STK10
TMEM168
PALM3
EDC4
SNAPC5
NFKBIA
GDAP1
CCNL1
CCDC174
EPCAM
ZNF391
TCF12
RPL37
SULF2
NECAB2
TMEM65
IQSEC1
PRKG1
TRUB2
COQ4
WDPCP
MDH1
CNOT2
ENOSF1
MKRN2
SKA2
PRR11
PDE8A
EID2B
SLC26A4
LMX1B
RUBCN
POLR1B
FCF1
AREL1
FYTTD1
PDE4D
TJP2
GPR89B
NOC4L
DDX51
ATG101
ANKRD46
DNAJC22
CORO2A
LINGO1
B4GAT1
PKP2
IGFL4
CPPED1
CCDC86
CPEB4
MDM2
LRRTM3
SEC31A
THAP9
SAPCD2
CASP7
TMEM68
TGS1
SLC44A2
SPTSSB
TSEN54
CASKIN2
MRPL16
WDR70
TSEN2
SYT17
SULT1A4
SULT1A3
UBXN7
HID1
CYB5A
DNAJC19
NOTCH1
RFESD
MAP3K5
S100A16
UBFD1
EARS2
MAD2L1
VILL
NRXN2
TBC1D19
TDRKH
METTL25
CCDC59
TRIM45
OXR1
SMAGP
TRIM56
UBE2Z
PPARD
NAA30
EXO1
EFR3A
THBD
PSMD9
HPD
CKAP2L
SRRM3
NADK2
CRB1
IVNS1ABP
ACHE
EPB41L4B
TRIM9
FUT8
MPHOSPH10
MCEE
C8orf37
NUFIP2
RILPL1
LXN
GABPB1
GRHL1
SLC22A17
URB1
RPS27L
MTMR6
IL1RN
SRFBP1
PLCB4
HPCA
PDE1C
C12orf73
MRPS14
GRIA2
NUDT4B
NUDT4
APRT
ECH1
LRRD1
SCAMP5
PIK3C2B
CETN3
RHBDF1
NECTIN4
TIMM17A
C8orf33
TTC27
MMAA
ZNF3
ATP5MC2
PPAT
PAICS
XRCC2
NCBP2AS2
NCBP2
PREPL
CAMKMT
TAFA2
CCDC88C
ASCL5
SNX1
H4C14
TMBIM4
ATXN7
VAMP5
OSBPL2
SRP68
ZNF217
GREB1
ADPGK
PDXDC1
ATF7-NPFF
ATF7
CADPS
PCP4
MACC1
CELSR3
KIF20A
BRD8
BBS1
CAND1
HPS3
GABPB2
OTUD6B
DDX5
CEP95
S100A2
POM121C
HNRNPH1
IARS1
METTL9
METTL3
IMPA1
MARCHF10
FBXO5
ANKHD1-EIF4EBP3
ANKHD1
DZIP3
CIP2A
AKAP1
NBAS
AGK
GTF2H2C
GTF2H2C_2
CABP1
PCBP2
ATXN3
IRF2BPL
ADIPOQ
CENPF
HBP1
NDUFAF6
ICA1L
GPHN
ELK4
RFC1
RBM45
SAR1B
PARP6
C1orf194
RFFL
ZBTB7B
SLC16A3
FAM50B
WDR27
C6orf120
CLCF1
LIMA1
S100A10
TFF1
ELAPOR1
ASIC3
SCP2
GJA10
NRL
DCAF11
RIF1
ZNF696
ZNF579
SVIL
PLAC8
DOP1B
TM7SF2
USP15
CPNE4
GARS1
POLR1H
TOR1AIP1
PKP4
POLR2K
UTP15
ANKRA2
ATP8B1
COMMD9
RBM4B
MRPL21
IGHMBP2
HERC5
ZNF23
SLC25A30
KLHDC1
ZC3HC1
WDR4
MCM7
AP4M1
MRPS31
CELF6
NDC80
METTL4
MDC1
THTPA
C1orf56
INO80C
MKS1
MIOS
SEMA3C
DLC1
NKAIN2
SMYD5
VGF
USP8
COLEC12
CAPN8
TMEM199
POLDIP2
CRKL
CBWD5
CBWD3
CBWD6
RGPD6
POMZP3
ATP6V0D1
TTK
SVIP
DUS1L
ZFYVE16
RABGAP1
EVPL
CDC73
GTF2H4
ZFYVE26
CITED2
XKR9
LACTB2
EIF2S1
ATP6V1D
RFC3
TBL1X
KPNA2
C1QTNF6
ZBTB34
S100A11
CDK5RAP3
SAAL1
UHRF1BP1L
BCAS2
CCNA2
MRPL27
EME1
RMDN2
RASEF
MB
ZNRF2
PPP1R3D
PDCD10
SERPINI1
RALGAPA1
ZMYND8
TTC6
FOXA1
SST
SECISBP2
NUFIP1
GPALPP1
AAAS
RPS12
BCAR1
UNC13D
RBM28
TRMT61B
NCEH1
CD55
TACR1
RASAL2
RNF144B
TEX2
PTAR1
ANAPC5
TOX4
RAB2B
MRPS33
SLC8A2
ZNF775
TBC1D31
NUDT17
ARPP19
LAD1
YARS1
S100PBP
SUGCT
MPLKIP
KRR1
ASAH1
SETDB1
NUS1
FKBP9
NDUFS6
STRADA
SOS1
CCDC107
UTP3
SLC35B1
TRMT61A
EPHA3
TBC1D13
POLG2
DHRS7
PPIP5K2
KAT2B
TCHP
TATDN1
NDUFB9
GATAD1
TATDN3
NSL1
EXOG
ERCC6L2
AKAP9
TRAF6
RAG1
ABHD12
PLEC
ACOT4
HECTD1
ESRP1
H4C15