ChIP-Atlas: Target genes

Potential target genes for HDAC6

Query protein: HDAC6
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX186767 | hESC H1
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC6's Target genes

◢ HDAC6: Average

◢ SRX017706: CD4+ T cells

◢ SRX017710: CD4+ T cells

◢ SRX116458: hESC H1

◣ SRX186767: hESC H1

◢ SRX116425: K-562

◢ SRX116426: K-562

◢ SRX186700: K-562

◢ HDAC6: STRING

MTRNR2L8
WDR74
MTRNR2L2
MTRNR2L9
MTRNR2L10
RGPD2
RGPD1
MTRNR2L6
ASXL1
PSMB3
POLDIP3
ZNFX1
FUS
EEF1A1
EIF3E
KRT36
H2AC19
H2AC18
ACBD6
GTF2B
B2M
HSP90AB1
MEIS1
MICAL3
SRSF2
MFSD11
H4C14
H2BC12
H2AC12
ANGEL1
NUP214
FIBCD1
H4C11
TUBA1A
RAD23A
TRAF7
PRDX1
DYSF
RPL27
H4C15
H4C12
SRSF7
RPS27
NCOA7
H2BC11
H2AC11
H2BC21
H2AC20
H4C3
NME1
NDUFS7
HRK
RCC1
RPS29
DDX5
CEP95
RPL28
MAGOH
CALM2
TUBB4B
SESN1
NAT10
PHACTR2
ARRDC2
PMAIP1
RPS20
POLR3E
RANBP2
ESYT2
LY9
BRD2
CWF19L1
RPLP1
TFPT
PRPF31
SSNA1
ANAPC2
BTG1
ZC3H10
TTI2
SP2
CSRNP1
MNS1
H2AC21
SNX5
MGME1
H2AX
SHH
RPL10
IFRD1
MRPL44
MAPKAPK5
LUC7L2
FMC1-LUC7L2
FMC1
FAM53C
CDC25C
MFSD4B
RPL29
ZBTB37
DEF6
H2BC5
RPTOR
H3C2
SIRT4
SH2D2A
PHF19
NTRK1
ITPR3
HNRNPA1
CBX5
GIPR
DENR
THBS4
MTX3
TAF12
STX11
TRMT61B
IRF1
ZBTB40
IRF9
JUN
EIF4G2
SCML1
LRRC26
TRIM2
PSMD9
HPD
CAMLG
CLK1
IQGAP2
NOLC1
MRPS23
HERPUD1
CWC25
VPS72
ZBTB4
RAB7A
POLR2A
ZZEF1
CYB5D2
NUFIP1
H2BC8
H2AC8
GPALPP1
BCL2A1
GADD45B
TMEM39A
AMZ2
NOP58
RANGAP1
MTF2
NUP62
IL4I1
ATF5
HAX1
BCAR3
RPLP2
NOC4L
DDX51
TNF
NPAS4
YARS1
S100PBP
GALK2
COPS2
ATP5MC3
TUT1
SLC7A5
RPL23A
IL21R
EHD1
DDX19A
SSBP1
RPS13
ADARB1
HPS5
GTF2H1
RSL1D1
NR1H3
EEF2
CKS2
ACP2
CCDC91
SDCBP2
RPL10A
ITPR1
DNAJA3
APTX
ASCL2
PPP4R3A
DDIT4
CENPM
ATF3
SRGN
C16orf91
MRPS14
SIRT6
PTBP1
ID2
HNRNPUL1
ANKRD24
XPC
PCNA
MRPL24
LSM3
YTHDC1
STK40
RUNX1
SLC1A5
RPS6
HNRNPH1
ILF3
CCNL1
PRMT5
PPP1R10
MRPS18B
IER5L
DDX21
CCT8
H4C4
DCP1A
MAK16
SRSF5
SPATC1L
SAR1B
RPLP0
RMND1
MMACHC
EIF1
ARMT1
KCNAB2
ITGAL
GFM2
EIF4A1
EIF3K
TXNRD1
SLFN13
SEPTIN7
MRPS25
INO80B
COX5B
RRM1
OXSM
NGLY1
CDV3
BTF3
STOML2
SRSF1
SLC3A2
MYL6B
ZNF106
OCIAD1
NDUFB5
MRPL47
CXXC1
ASXL2
TNFSF14
METTL16
CSTF1
AURKA
RPL12
LRSAM1
GABPA
ATP5PF
NUTM1
NOP10
TSSC4
RAB6A
EIF3J
UBE2I
THADA
SKP1
SCAF11
LY96
LAX1
HNRNPA3
FBXW9
DNAJB4
CHPF2
RBM3
HMGN4
ENO1
DPP9
ANAPC10
ABCE1
SMG5
SFPQ
RPS15
RGPD8
RGPD5
PPIL4
KMT2D
SHISA5
RPL9
RPL15
NKIRAS1
LRRFIP2
LONP1
LIAS
CATSPERD
PAFAH2
NAA16
MTRF1
MRPL30
MITD1
H2BC4
H2AC6
FAM241A
CCNT1
C2orf42
MRRF
FADD
TSPYL2
NOB1
NABP1
IER5
DNAJC16
AIM2
VTA1
TMEM101
SUPT5H
RPS4X
NUP54
NMBR
KRR1
FBXO31
DDI2
METTL3
H3C1
ATP13A1
ZNF132
RHBDD1
CHD8
ASB8
ZNF207
SERP1
RFFL
HNRNPAB
EIF2A
SNX1
SNRPE
RPS2
RBMX
IER3
MRFAP1
GPN2
DIP2B
SAMD4B
PNP
EHD4
VASP
SH2D1A
RPL22L1
RGL4
CCAR2
CASP8
BORCS5
APOBR
WDPCP
STT3A
MSL2
MDH1
HSP90AA1
CDK12
C1orf53
ZNF764
SEMA3B
PWP2
MTHFD2
MORC3
LOC102724159
C8orf37
B3GAT3
SMIM12
SERBP1
RPL14
NASP
MRPL55
ITPRIP
IL23R
DDX39B
CRADD
C19orf48
ATP5MC2
TRMT2A
RSL24D1
RANBP1
NECAP1
WDR4
TMEM259
HSD17B12
HEXIM1
DDIT3
CCDC107
ATG5
TRAFD1
RPL38
QTRT2
PRPF19
OXCT2
EPRS1
DLG4
CCDC191
ALG1
TCTA
SF3A3
RHOA
PPP1R8
POLA2
CITED2
BTRC
ZNF3
TXN2
RETSAT
PKNOX1
ELMOD3
SPHK2
SPATA5L1
RPL18
NFYC
MZF1
METTL1
MED18
LARS2
H3-3B
H2BC18
GATM
EEF1AKMT3
CCR7
TTC26
THOC1
RPL7
RDH10
NUFIP2
ANGPTL4
ALG10B
RBPJ
KSR1
IMPDH2
DSTYK
ZNF668
ZNF646
SHF
RPS12
NOCT
H1-4
GFOD1
CIRBP
CD96
XRRA1
SPRYD4
SPCS2
RAB11A
POU2AF1
POLR3B
HSPA1B
GPR68
GOPC
VMAC
TRA2B
PPP1R15A
NDUFA11
KIF26B
KIF15
KIAA1143
COX8A
TICAM2
PURB
CHST11
CAVIN2
WDR90
MOK
COG3
CDKN1A
ZNF589
USP4
SF3B1
SCAND1
PAGR1
CLTC
RPL34
MLH1
EPM2AIP1
CD55
ZNF280C
TOGARAM1
POLG
NOL7
MORF4L1
METTL26
KLHL28
CLEC2D
CCDC174
MCCC1
KANSL2
FBRS
EMILIN2
USPL1
SARAF
RBM25
PRRC2C
NOP16
MORN3
JUNB
HMGB1
HIGD2A
GTF2H3
EIF2B1
CLP1
NXF1
MAP2K7
IPO4
AP2B1
RRNAD1
MRPS7
LBH
ISG20L2
GGA3
ELK4
DNAJB2
TATDN2
TAP1
SNX9
RPL5
RPF2
PSMB9
IL10RA
ELOC
XPOT
TBRG4
MRPL45
ENOSF1
RPS3A
PLD6
PDCD1
NDUFB6
N6AMT1
MFSD8
GPR183
EID2B
AMN1
ABHD18
TOMM20
TAF1D
SPTBN4
SLMAP
SECISBP2
PPAN-P2RY11
PPAN
HIBADH
C11orf54
BLVRB
TRMT112
PRDX5
PNPLA8
NPM1
ERLIN1
EMP1
EIF3D
TUBA1C
TTPAL
TMF1
CREM
ABCD3
PPME1
NFU1
MAP1B
HNRNPC
HM13
G3BP1
FAM78A
FAF1
CLK4
C2CD3
ZBTB11
TSN
SLC25A23
OTUD6B
NACA
MACIR
ITGB3
FAM227B
DTWD1
CSNK1A1
ACE
WRAP53
TP53
MIS18A
LARP1
IPO7
EIF4B
DYNC2I1
CD247
RBM7
PSMD3
PBRM1
OSM
LSM14A
HDAC4
GNL3
C11orf71
MKRN2
LDHA
HINT3
GATB
SF3B5
SELENOI
NSRP1
KHDRBS1
FAM71D
ADGRF3
ABCA5
TRAPPC4
SNX17
RPS25
MARS1
GPR137
FARSB
EIF2B4
ARHGAP9
TOMM5
PIK3CD
NUP205
MFAP1
MAT2A
KTI12
ARF4
ZNF248
TXNDC9
TIMM17A
SEC14L1
RIMBP3
PRDM1
PHB2
NUP42
KXD1
EIF5B
CDK13
TRMT10C
TOMM40
NR1H2
DISC1
UTP25
PPP1R11
NDUFAF5
MIDEAS
HILPDA
ETFBKMT
ESF1
NIP7
NAAA
IARS1
ESCO1
DUSP11
COG8
WDR19
RAB18
LOC100289561
P4HA1
TMEM186
PMM2
NKAIN1
HBS1L
VCPKMT
STX4
RPL41
GUF1
MFSD14A
ARIH2
PREPL
OAZ1
MRPS15
DUS3L
CAMKMT
ZNHIT1
ZNF33A
SLC30A6
PLOD3
MRPL20
DCLRE1B
AP4B1
UBE2L3
TRMO
RIMBP3C
RIMBP3B
ZMPSTE24
RPS24
EBAG9
XRCC2
THEM6
BHLHE40
DIAPH1
TXN
SACM1L
LONP2
ATF1
ABCC11
TAMM41
RNF34
HTR5A
GPN3
FAM216A
TMEM248
PDE4A
TBX18
ALX4
VPS29
RAD9B