ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116424 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◣ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
KIF5C
MTRNR2L2
MSH3
DHFR
HTR5A
MTRNR2L8
MAMDC2
XKR7
DUX4
IQSEC3
EPN1
RTBDN
MAST1
NKX1-1
LIN28A
HPCA
NUP214
CEBPE
LMLN2
TUBA1A
SPTAN1
RBM48
PEX1
INSM2
MUC3A
FAM24A
MICAL3
ZNF335
MTRNR2L9
TDRD7
CPLX2
RFX1
EIF2D
SFSWAP
L1CAM
TMEM101
PYY
NAGS
MTRNR2L10
SYT11
GON4L
SUMF1
WDR74
STX5
EPHA10
PDE4A
RGPD2
RGPD1
SMIM17
NCLN
S1PR4
NACAD
RIMBP3C
RIMBP3B
DIO1
RIMBP3
NACC2
TOP3B
RIPPLY2
CYB5R4
ZNF23
SNX16
ZCCHC7
MTRNR2L1
FRG2C
CHGB
PMF1-BGLAP
PMF1
MACIR
TIGAR
DLGAP3
UBE2L3
CACNG3
OSCAR
NDUFA3
MAPK8IP2
RAB42
CKMT1A
P2RX6
PPIP5K1
CKMT1B
NBPF1
UBL5
PIN1
MFSD4B
CELSR3
PTPRN2
NPPB
CADM3
UTP20
ART1
MANEAL
CLVS1
GSC2
FRG2
NAGPA
GPR158
COL23A1
UFD1
CDC45
NEU1
SCG3
PRAME
BARHL1
PSMD9
HPD
SNAP25
GET3
SHFL
NUCKS1
SDC3
TJP3
MTRNR2L6
RTL10
GNB1L
TTC9B
CCNP
GJD3
EMILIN2
ADCYAP1
ZC3H18
RBM19
TMEM181
FIBCD1
ANK1
SLC18A3
CHAT
CCDC200
ERCC1
PAQR4
KREMEN2
PICK1
FBXO5
USP35
KCTD21
UQCR11
SCRT1
DGAT1
ANKHD1-EIF4EBP3
ANKHD1
TPBGL
USP30
SVOP
CIZ1
DHX40
TOMM22
MEGF9
TRAF1
VPS37D
TRIM48
GPR78
RTN3
ATL3
SPATA2
TEKT2
ADPRS
CEACAM16
UNC13A
MAPK1
KCNH7
GNB4
PPFIA3
C19orf73
LIN7B
RAB37
PGBD5
PPP1R35
ZCWPW1
MEPCE
VARS1
UBE2O
AANAT
NEK6
TTC38
PKDREJ
TRMT1
NACC1
WASHC2C
KLHL18
KIF9
CRKL
SLC6A6
UNC45B
NLE1
SETD1B
C1QTNF8
FHL3
UTP11
FAM72C
FAM72A
GFOD1
KIF18B
MRPL40
HIRA
FAM72D
MICALL2
NBPF3
TRIP13
BRD9
FEM1A
CDKN1A
ACBD6
DYSF
TSR3
GNPTG
GBA
PDE4C
CHRM4
METAP1D
RRM2
CYRIB
TSPOAP1
PHRF1
FAM72B
TSPAN13
ESCO2
CCDC25
SST
GPR107
GTF2H3
EIF2B1
FNBP1
PCBP3
CRBN
DNAJC11
IER5L
YTHDF1
LPIN1
NBPF15
C6orf136
IDH3B
UBE3B
KCTD10
TSEN2
LHFPL4
RAP1GAP
ADAMTS14
RFC1
ARHGAP28
ODF2
YPEL1
CTPS1
RRP15
C12orf66
METTL2B
WASHC2A
DHX37
BRI3BP
TMEM121B
DPF1
SGSM1
DYNC2I1
ESYT2
VPS37C
RASGRP2
QTRT1
RABIF
E2F6
SLC25A24
INPP5B
CREG1
IL1RL1
NUP35
HNRNPD
RPA2
CDCA8
C1orf109
NFIC
SEBOX
TMEM199
POLDIP2
KCNK12
SYNJ2
ANKRD36C
POU5F1
TCF19
CCHCR1
WSCD2
LCMT2
ADAL
BOD1
SOGA1
CDC7
NRCAM
BRAF
VPS50
HEPACAM2
CBX8
S100A8
S100A7A
C15orf39
DNAJC6
HSD17B1
COASY
ZC3H15
CCDC92B
MLX
TRAPPC2L
GALNS
SLC66A3
PHC2
SMYD5
NAT10
EPC2
TIMM10
SMTNL1
ITPR3
NOP16
HIGD2A
KTI12
ACVR2A
PPIL2
NAXE
GPATCH4
TAS1R1
NOL9
EML2
LRRFIP2
PAFAH2
GPATCH3
GPN2
SLC39A7
RXRB
RING1
HSD17B8
FOXA3
PUS7
SYMPK
CSRNP1
MRPS26
GNRH2
ALX4
CRNKL1
CFAP61
PIK3CD
PTGFRN
ZBTB32
GATA1
RSPH14
RAB36
PDLIM7
ITGAV
SLC4A1
KCTD15
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
C8orf33
CHST12
EBI3
AP3B2
DNA2
ACE
NOL6
ST6GAL1
CD19
RABEP2
SPDEF
TSTD2
NCBP1
ZNF503
SPNS1
LAT
BUB1B
ZNF718
ZNF595
YDJC
CCDC116
AMER3
MAST3
IL12RB1
NOS3
CLK3
IBA57
KCNH2
NTAN1
CA4
CBLL1
TRAIP
LRP11
CASZ1
GGACT
COLGALT2
FABP6
LOC388282
KIFC3
APOC3
APOA1
SCGN
PGPEP1
LTV1
XPC
LSM3
TADA1
SLC27A4
GATB
CHCHD1
FUT11
DGAT2
HEXA
JUNB
HOOK2
ARID3A
R3HDM4
KISS1R
GRM1
DRG2
DRD2
CD83
LYSMD2
RPP25
GRPEL2
NDST1
MARCHF11
SNAP29
PI4KA
AEN
CMIP
ODF3L2
VTA1
NMBR
SLC12A9
THAP7
PSME3
BECN1
ZFYVE26
RAD51B
OGDHL
ASNS
KLHL21
PNPLA6
DGCR8
TARBP1
TMEM191B
GAS8
C20orf204
OXNAD1
DPH3
FAM78A
NXPH3
H4C12
H4C11
CRH
H2BC14
H2AC14
CLN6
IQGAP2
PPIA
PMS2
AIMP2
ZSCAN30
PRELID2
NME1
ZGLP1
XRCC2
BCAT1
SRXN1
FDX2
CNNM3
SRRD
HPS4
AKT2
SPDYE14
SPDYE10P
AIF1L
C16orf89
ALG1
TRMT2A
RANBP1
STOX1
OAZ3
ZFYVE1
MAPK11
CDC25B
THOC3
CENPB
IMMP2L
MAPK12
HSPA1B
EXOSC2
CBFA2T2
TAP1
PSMB9
PSMB8
IL4I1
GADD45B
GRIK1
ZNF830
CCT6B
TYMS
TYMSOS
CNOT4
SETD1A
ORAI3
SFT2D3
NFE2L2
DUSP1
ATP5PO
NSMAF
PWWP2A
LUC7L2
FMC1-LUC7L2
FMC1
KDM4A
SMIM11B
SMIM11A
DGCR6L
PPM1G
CARD11
SLC39A3
PDE1C
VAC14
CCDC69
KAT6B
PKD2L2
FNDC10
FOXD4L1
OR2L13
OR2AJ1
ZC3HC1
PRRT3
PYCR3
GFUS
SLC39A13
SRSF7
ZNF596
CERS6
ARRDC2
ANKRD36B
ASCL2
USP54
SLC38A10
EPS15
CYP51A1
STX7
RCCD1
COTL1
CXCL3
OGFOD1
NUDT21
SPATA25
CTSA
NEURL2
MIS18A
DDX31
PCNA
GTF3C4
AGBL3
TMEM230
CDS2
RECQL4
LRRC14
LRRC24
MFSD3
CASTOR2
ATP6V0E2
PERP
DCLRE1B
AP4B1
EBNA1BP2
CFAP57
KIF2C
UBIAD1
TRAP1
C20orf203
KCNJ14
GRWD1
RBSN
SORBS1
GTPBP3
ANO8
SELPLG
ZDHHC12
POLQ
OPRL1
RGS19
HDAC11
LKAAEAR1
CACTIN
LINGO1
CDC42BPG
TMEM70
ELOC
ANKRD63
LEF1
SULT1A4
SULT1A3
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SKA3
MRPL57
FAH
MRPL2
KLC4
CUL7
HRK
NOM1
DOLPP1
VHL
RAB33B
TMEM242
TSEN54
LLGL2
CASKIN2
UBE2H
NR2F6
EMC1
MRTO4
PIP4P2
KLHL22
MYPOP
MISP3
LOC102724770
DGCR6
KIAA0895
N6AMT1
KCNN4
ANLN
PIGBOS1
PIGB
NUDT2
KIF24
ZWINT
SDF2L1
POLR3G
MBLAC2
TMEM191C
KLHL36
AQP11
SUFU
ACTR1A
DHDDS
TMEM248
DNTTIP2
TRUB2
COQ4
C1orf159
CDK11B
CDK11A
ADARB1
PHF20
SRGAP1
TBX1
CENPS-CORT
CENPS
URB1
TCIRG1
NDUFS8
HNRNPLL
OIP5
NUSAP1
H2BU1
H2AW
LRRC8B
MYT1
OAF
VPS33A
CPPED1
BIRC5
MFSD1
NSUN5
HLTF
LCN8
LCN15
WWP2
LCN6
LZTR1
NOB1
ARID3B
GLRA1
MYCL
CFAP73
TTC26
CCNA2
EIF3H
POLR1B
PHACTR2
DGUOK
ZNF75A
TIGD7
PRSS16
CNTRL
CTF1
BCL7C
C5
TMEM210
LRRC26
OXTR
GSTK1
GALNT2
DGCR2
TSSK2
YIF1A
TMEM151A
TASOR2
SAR1B
CHCHD3
XXYLT1
MYLIP
TNFRSF21
AGK
ADGRE2
CCSAP
AKAIN1
MTFR2
JMJD1C
CCT2
RAD51AP2
PITPNA
VSNL1
KAT2B
PLK1
CENPE
FCHO1
C3orf80
DLK2
MYO18A
ZNF280D
TENT5C
HACE1
FRMD6
TRMT61A
CKB
GPD1
COX14
OTULIN
ATE1
EXOSC6
NAE1
PAXBP1
SYNJ1
XYLB
RNF141
ZNF74
FBXO4
MMP24
COMMD1
ZKSCAN4
NKAPL
SCCPDH
CCDC32
CCT4
RPUSD2
HACD3
PAX4
KLF1
GCDH
DNASE2
FBXO28
TNFRSF8
CYB561D1
C5orf51
SARS1
STIL
USP48
MTHFD1
TMEM51
RNF187
MARCHF4
UTP25
CFAP298-TCP10L
CFAP298
THEM6
CRELD1
PPP1R7
PASK
COMT
TXNRD2
RARG
B3GNTL1
PDE4DIP
ANKRD36
ADAM19
CBFB
ZNF398
TOP3A
SMCR8
TRIM67
GALNT11
PTPRB
FAM181B
KAT5
RNASEH2C
NSFL1C
TTF2
ECI2
ANXA7
CFAP299
CREB3L2
SNX8
GSDMD
GLIS2
VPS35
BRAP
ACAD10
DHH
GAREM2
ID3
PLD1
TBC1D22A
OGFOD3
HEXD
NUDT3
MXRA7
TMEM184A
CDKAL1
CPNE9
PINX1
GPC6
NPIPA3
NPIPA2
CMC2
CENPN
METTL15
KIF18A
PLLP
ITPR2
SRSF10
SSBP1
BIRC6
GGCT
POLR2J
RDH5
ITGA7
BLOC1S1
QKI
GPATCH1
RAB39A
H1-10
ITSN1
CRYZL1
EHD2
DMTN
SPOCD1
RTTN
OXR1
SOD2
ZMPSTE24
ACAT2
NOL7
C22orf39
C16orf71
ANKS3
GAA
SAMD13
MCUB
RAD51
SCAF11
EEF1AKMT3
METTL1
CYP27B1
STX11
RBBP8NL
STK40
AKAP1
GSN
RAB14
ARL4D
CAMTA1
ZNF555
ZEB1
KCTD18
POLR3H
STAT1
NOTCH2
ZNF77
TPH2
FANCD2
PDE6D
COPS7B
ZNF581
ZNF580
NUF2
KXD1
EAPP
ASF1A
SRA1
SLC35A4
APBB3
CCDC106
STX16
DNAJC5
TIPARP
POLR2J3
VIM
AFAP1
SCFD2
U2AF2
TTLL4
IFT46
ARCN1
LARP1
PRRC2B
RAD23A
CALR
AHCY
FARSA
TRIP4
PCLAF
D2HGDH
COMMD2
SPOP
SMG8
TAS1R3
PSEN2
NEIL3
TXLNA
ITGB3BP
EFCAB7
SUPT7L
SLC4A1AP
INTS12
GSTCD
RINL
PRR14
FBRS
NEK2
PRR5L
FAM227B
DTWD1
TM9SF1
IPO4
HAGH
FAHD1
TBC1D19
EIF1AD
CST6
BANF1
GTF3C3
C2orf66
RBBP5
COMMD9
WASHC5
NSMCE2
SPDYE7P
POM121
P4HA1
PKDCC
TTC24
IQGAP3
PGAM5
SF3A3
CENPP
WDR36
SEPTIN9
COX16
PEX3
ADAT2
NCAPH
ITPRIPL1
RHEBL1
RABGAP1L
CDK5RAP1
KDM2A
PLEKHM3
PDXK
TDRKH
HDAC2
NOL8
EXO1
UBFD1
EARS2
SIT1
SMARCD2
NEUROD4
MTF2
SGO1
NUP107
ZSWIM1
RPS7
SEC24B
CENPF
RPS19
MRPL44
CCDC107
ARHGEF39
HIBADH
HMGB1
MTERF4
EIF3F
KCNB1
WTAP
CCNG2
ATG14
TARS2
CERCAM
TIMM17A
RBM28
LMOD1
CDT1
DCUN1D2
TMEM262
DDX18
TSFM
RRP12
APRT