ChIP-Atlas: Target genes

Potential target genes for HDAC2

Query protein: HDAC2
Distance from TSS: ± 1 kb  ± 5 kb  ± 10 kb
Sort key: SRX116424 | K-562
 
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  1000 750 500 250 1 0  (Values = Binding scores of MACS2 and STRING)

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Links: Movie and Document for ChIP-Atlas Target Genes
HDAC2's Target genes

◢ HDAC2: Average

◢ SRX017704: CD4+ T cells

◢ SRX687555: Erythroid progenitors

◢ SRX1053939: ES cells

◢ SRX1053948: ES cells

◢ SRX1053951: ES cells

◢ SRX1053958: ES cells

◢ SRX1053973: ES cells

◢ SRX1053977: ES cells

◢ SRX4909431: HCC3153

◢ SRX4909432: HCC3153

◢ SRX100538: Hep G2

◢ SRX100390: hESC H1

◢ SRX116457: hESC H1

◢ SRX186668: hESC H1

◢ SRX3694983: HL-60

◢ SRX3694988: HL-60

◢ SRX1053919: iPS cells

◢ SRX1053924: iPS cells

◢ SRX1053929: iPS cells

◢ SRX1053934: iPS cells

◢ SRX1053963: iPS cells

◢ SRX1053968: iPS cells

◢ SRX1053981: iPS cells

◢ SRX1053986: iPS cells

◢ SRX1053991: iPS cells

◢ SRX1053996: iPS cells

◢ SRX1054001: iPS cells

◢ SRX1054006: iPS cells

◢ SRX2023732: iPS derived cardiac cells

◢ SRX2023764: iPS derived cardiac cells

◢ SRX100516: K-562

◢ SRX116423: K-562

◣ SRX116424: K-562

◢ SRX186643: K-562

◢ SRX7135363: K-562

◢ SRX1514286: Kasumi-1

◢ SRX190281: MCF-7

◢ SRX2140211: MM.1S

◢ SRX4732741: Pre-B cells

◢ SRX4313202: RH-4

◢ SRX4313219: RH-4

◢ SRX4313220: RH-4

◢ SRX7643943: U-87 MG

◢ SRX059711: VCaP

◢ SRX059712: VCaP

◢ HDAC2: STRING

NPAS4
MTRNR2L2
HTR5A
MTRNR2L8
XKR7
IQSEC3
HPCA
NUP214
TUBA1A
RBM48
PEX1
MICAL3
ZNF335
MTRNR2L9
TDRD7
CPLX2
RFX1
EIF2D
SFSWAP
L1CAM
MTRNR2L10
GON4L
SYT11
SUMF1
WDR74
EPHA10
PDE4A
RGPD2
RGPD1
NACAD
RIMBP3C
RIMBP3B
RIMBP3
TOP3B
CYB5R4
SNX16
ZCCHC7
CHGB
MACIR
TIGAR
UBE2L3
CACNG3
OSCAR
NDUFA3
MAPK8IP2
CKMT1A
P2RX6
CKMT1B
NBPF1
PIN1
MFSD4B
CELSR3
NPPB
UTP20
MANEAL
CLVS1
NAGPA
GPR158
UFD1
CDC45
NEU1
SCG3
PRAME
BARHL1
PSMD9
HPD
SNAP25
GET3
SHFL
NUCKS1
TJP3
MTRNR2L6
RTL10
GNB1L
TTC9B
ADCYAP1
RBM19
TMEM181
FIBCD1
ANK1
PAQR4
PICK1
FBXO5
USP35
KCTD21
UQCR11
SCRT1
ANKHD1-EIF4EBP3
ANKHD1
TPBGL
SVOP
CIZ1
DHX40
TOMM22
MEGF9
TRAF1
VPS37D
GPR78
ATL3
SPATA2
ADPRS
MAPK1
GNB4
PPFIA3
C19orf73
RAB37
PGBD5
ZCWPW1
MEPCE
VARS1
UBE2O
AANAT
TTC38
NEK6
TRMT1
WASHC2C
KLHL18
KIF9
CRKL
UTP11
FAM72C
FAM72A
GFOD1
KIF18B
MRPL40
HIRA
FAM72D
NBPF3
TRIP13
BRD9
FEM1A
ACBD6
DYSF
TSR3
GNPTG
GBA
PDE4C
CHRM4
METAP1D
RRM2
CYRIB
FAM72B
TSPAN13
ESCO2
SST
GTF2H3
EIF2B1
FNBP1
CRBN
DNAJC11
IER5L
NBPF15
C6orf136
IDH3B
UBE3B
KCTD10
TSEN2
ADAMTS14
RFC1
ARHGAP28
ODF2
YPEL1
RRP15
C12orf66
METTL2B
WASHC2A
DHX37
TMEM121B
DPF1
SGSM1
ESYT2
VPS37C
RASGRP2
QTRT1
RABIF
E2F6
SLC25A24
CREG1
INPP5B
IL1RL1
NUP35
HNRNPD
RPA2
C1orf109
CDCA8
TMEM199
POLDIP2
KCNK12
ANKRD36C
SYNJ2
TCF19
CCHCR1
WSCD2
LCMT2
ADAL
BOD1
CDC7
SOGA1
BRAF
NRCAM
VPS50
HEPACAM2
S100A8
CBX8
C15orf39
DNAJC6
ZC3H15
CCDC92B
COASY
TRAPPC2L
GALNS
SLC66A3
SMYD5
NAT10
EPC2
TIMM10
ITPR3
NOP16
HIGD2A
ACVR2A
GPATCH4
KTI12
TAS1R1
NOL9
PPIL2
EML2
LRRFIP2
PAFAH2
GPATCH3
RING1
SYMPK
PUS7
FOXA3
MRPS26
CSRNP1
ALX4
CRNKL1
CFAP61
PIK3CD
PTGFRN
GATA1
ZBTB32
ITGAV
PDLIM7
RAB36
NOTCH2NLC
NOTCH2NLB
NOTCH2NLA
C8orf33
AP3B2
CHST12
DNA2
ACE
NOL6
ST6GAL1
RABEP2
TSTD2
NCBP1
SPNS1
YDJC
BUB1B
AMER3
CLK3
IBA57
NTAN1
CBLL1
TRAIP
LRP11
GGACT
COLGALT2
PGPEP1
LOC388282
SCGN
LTV1
XPC
LSM3
TADA1
SLC27A4
GATB
FUT11
DGAT2
HEXA
GRM1
KISS1R
DRG2
DRD2
CD83
LYSMD2
GRPEL2
MARCHF11
RPP25
SNAP29
PI4KA
AEN
CMIP
VTA1
NMBR
SLC12A9
ZFYVE26
THAP7
PSME3
OGDHL
ASNS
KLHL21
PNPLA6
DGCR8
TMEM191B
TARBP1
OXNAD1
DPH3
FAM78A
CRH
H4C11
CLN6
IQGAP2
PPIA
AIMP2
ZSCAN30
PMS2
PRELID2
NME1
XRCC2
FDX2
SRXN1
HPS4
BCAT1
SRRD
AKT2
CNNM3
AIF1L
ALG1
TRMT2A
RANBP1
STOX1
OAZ3
ZFYVE1
THOC3
CDC25B
IMMP2L
EXOSC2
MAPK11
HSPA1B
CBFA2T2
TAP1
PSMB9
GADD45B
GRIK1
ZNF830
CCT6B
CNOT4
SETD1A
SFT2D3
NFE2L2
ATP5PO
NSMAF
DUSP1
PWWP2A
FMC1-LUC7L2
FMC1
KDM4A
DGCR6L
PPM1G
SMIM11B
SMIM11A
CARD11
SLC39A3
PDE1C
VAC14
CCDC69
PKD2L2
KAT6B
FNDC10
OR2L13
ZC3HC1
PRRT3
PYCR3
ZNF596
SRSF7
CERS6
ANKRD36B
ASCL2
ARRDC2
USP54
EPS15
CYP51A1
STX7
SLC38A10
COTL1
RCCD1
CXCL3
OGFOD1
NEURL2
CTSA
MIS18A
GTF3C4
DDX31
PCNA
AGBL3
RECQL4
LRRC14
ATP6V0E2
PERP
EBNA1BP2
CFAP57
DCLRE1B
AP4B1
KIF2C
UBIAD1
TRAP1
GRWD1
RBSN
GTPBP3
SORBS1
ANO8
SELPLG
ZDHHC12
POLQ
CACTIN
CDC42BPG
TMEM70
LEF1
ANKRD63
HDAC11
SLX1B
SLX1A
BOLA2B
BOLA2
BOLA2-SMG1P6
SKA3
MRPL57
MRPL2
KLC4
HRK
NOM1
DOLPP1
RAB33B
VHL
TMEM242
TSEN54
CASKIN2
MRTO4
EMC1
PIP4P2
KLHL22
MYPOP
MISP3
UBE2H
KIAA0895
N6AMT1
PIGBOS1
PIGB
ANLN
NUDT2
KIF24
POLR3G
MBLAC2
KLHL36
AQP11
SDF2L1
TMEM191C
SUFU
DHDDS
TMEM248
TRUB2
COQ4
DNTTIP2
CDK11B
CDK11A
ADARB1
SRGAP1
PHF20
TBX1
CENPS-CORT
CENPS
URB1
OIP5
NUSAP1
TCIRG1
HNRNPLL
LRRC8B
H2BU1
H2AW
OAF
VPS33A
CPPED1
BIRC5
MFSD1
NSUN5
HLTF
LZTR1
NOB1
GLRA1
TTC26
CCNA2
EIF3H
POLR1B
DGUOK
ZNF75A
TIGD7
PHACTR2
PHC2
CNTRL
C5
OXTR
GALNT2
GSTK1
LRRC26
DGCR2
YIF1A
SAR1B
TASOR2
CHCHD3
XXYLT1
TNFRSF21
MYLIP
AGK
AKAIN1
MTFR2
JMJD1C
CCT2
VSNL1
PLK1
CENPE
FCHO1
C3orf80
DLK2
ZNF280D
MYO18A
HACE1
TENT5C
FRMD6
TRMT61A
COX14
OTULIN
EXOSC6
NAE1
ATE1
PAXBP1
SYNJ1
XYLB
RNF141
ZNF74
FBXO4
MMP24
COMMD1
SCCPDH
ZKSCAN4
CCT4
RPUSD2
HACD3
GCDH
FBXO28
TNFRSF8
C5orf51
SARS1
STIL
CYB561D1
MTHFD1
USP48
BRI3BP
EMILIN2
RNF187
MARCHF4
UTP25
CFAP298-TCP10L
CFAP298
THEM6
CRELD1
PPP1R7
PASK
B3GNTL1
RARG
CDKN1A
COMT
PDE4DIP
ANKRD36
ADAM19
CBFB
TOP3A
SMCR8
ZNF398
TRIM67
GALNT11
PTPRB
FAM181B
TTF2
NSFL1C
ECI2
RNASEH2C
ANXA7
CFAP299
CREB3L2
SNX8
DGAT1
VPS35
BRAP
ACAD10
TBC1D22A
NUDT3
ID3
PLD1
CPNE9
CDKAL1
PINX1
CENPN
ITPR2
PLLP
SRSF10
SSBP1
BIRC6
GGCT
POLR2J
BLOC1S1
GPATCH1
RAB39A
ITSN1
CRYZL1
H1-10
DMTN
SPOCD1
RTTN
OXR1
SOD2
ZMPSTE24
ACAT2
NOL7
C22orf39
C16orf71
ANKS3
GAA
MCUB
SAMD13
RAD51
METTL1
EEF1AKMT3
STX11
STK40
AKAP1
GSN
RAB14
CAMTA1
ZNF555
ZEB1
KCTD18
POLR3H
TPH2
FANCD2
COPS7B
NUF2
KXD1
ASF1A
SLC35A4
APBB3
STX16
TIPARP
POLR2J3
SCFD2
ZNF77
TTLL4
DNAJC5
LARP1
CCDC106
VIM
AHCY
CALR
COMMD2
TRIP4
SPOP
NEIL3
TXLNA
ITGB3BP
EFCAB7
INTS12
GSTCD
SMG8
FBRS
FAM227B
DTWD1
IPO4
TBC1D19
EIF1AD
BANF1
GTF3C3
NEK2
RBBP5
P4HA1
IQGAP3
WASHC5
NSMCE2
PGAM5
SF3A3
WDR36
COX16
PEX3
ADAT2
NCAPH
CDK5RAP1
POM121
COMMD9
PLEKHM3
TDRKH
HDAC2
NOL8
EXO1
CENPP
UBFD1
EARS2
NEUROD4
SGO1
NUP107
SUPT7L
SLC4A1AP
CENPF
RPS19
MRPL44
CCDC107
HIBADH
HMGB1
RPS7
EIF3F
D2HGDH
MTF2
WTAP
CCNG2
IFT46
TIMM17A
DCUN1D2
TARS2
DDX18
TSFM
MED23
CERCAM
KDM2A
CFAP54
FXN
TACO1
ATR
SEC24B
ATG14
HAGH
FAHD1
CKAP2L
STX18
RRP12
KCNB1
EBAG9
RABGAP1L
ADAMTS17
BEND3
YARS1
MTDH
SEC31A
THAP9
MTERF4
TRMO
RTN4
DNPEP
GOLGA7
RGL1
KIF20A
BRD8
MTBP
MRPL13
USPL1
PKDCC
NOTCH2
TM7SF2
CDT1
RBM28
WDR11
SAP30BP
RECQL5
CSTF1
AURKA
STAT3
S100PBP
ARPC5
POLR3F
DZANK1
COMMD4
MTIF2
NDUFS7
LRRC59
CCDC88A
TRAPPC6A
BLOC1S3
KDM1A
KIAA1586
NUP54
PSMD6
EIF5B
NSUN4
PUS10
PEX13
YTHDF2
ANKRD31
SLC25A51
RAE1
PPM1B
NDUFAF5
ESF1
SMIM12
NDUFS3
KBTBD4
NLE1
KLHL20
ASMTL
FAM117B
RAD54L
ZCCHC4
TTC27
GTF3C5
FAM133B
ZNF276
RRS1
PFDN4
ANTXR1
SLC25A26
CCDC86
SEC13
ACVR1
SASS6
DMAP1
SELENOH
TXNDC9
ANAPC5
LAMP1
MRPL3
CBWD5
BCAS3
CCDC200
SNX1
CYB5A
DNAJC25-GNG10
DNAJC25
SLC33A1
SDAD1
TMEM222
ARHGDIA
INO80B
FAM98A
H6PD
PRRC2B
PIH1D2
NKAPD1
STAG1
ERG
HUS1
SUGCT
MPLKIP
VPS29
RAD9B
DNAH7
SMARCD2
TTC31
VPS9D1
DCAF10
TATDN3
NSL1
FAF1
SLC25A40
PIKFYVE
DBF4
ATP5F1E
LSG1
TEFM
SGO2
GDAP1
SNRPB2
CBWD3
RAB18
NDUFAF4
KLHL32
SLC45A4
PBK
INTS7
DTL
NTSR2
RBM42
TMEM41A
RUVBL1
FAM207A
EIF2B3
KHK
BNIP1
GLI4
MRPS18C
HELQ
HES3
SMIM30
SRRM3
FAM98B
MARCHF8
DZIP3
CIP2A
NOS3
NMNAT1
MRM3
LZIC
GLOD4
FRA10AC1
USP30
ENOSF1
PSMD3
NDUFC2-KCTD14
NDUFC2
NDUFB3
FAM126B
PIP5K1A
CDC73
EXOSC5
BCKDHA
MFSD14A
ANXA5
ZNF668
RAD51AP1
C12orf4
MRPS15
MRPL30
MITD1
GATAD2A
CWC25
TAMM41
AAR2
ZSWIM8
GFM2
METTL25
CCDC59
ARHGAP45
SCP2
WDR4
PUM3
TFIP11
CCDC146
TRMT6
MCM8
XKR9
LACTB2
CGGBP1
PASD1
MAIP1
CDK7
GTF2H4
MTR
CDC25A
U2SURP
OGDH
FAM228B
TRIAP1
DPY19L4
PIEZO1
FBXO48
APLF
SYF2
KDM3A
STMN3
ANP32E
H4C14
C10orf88
NGDN
TICRR
RBM45
FRMD3
UTP3
STEAP2
SEPTIN9
NADK2
SSNA1
MOCS3
DPM1
ANAPC2
DIAPH1
SNRPE
NUDT15
TBRG4
MRPL39
GTPBP10
RGPD8
RGPD5
KIF15
KIAA1143
USP2
ZNF558
PNPT1
SRSF11
DIABLO
TSN
STAT1
CBWD6
SLC44A1
ANKRD12
COPS4
HSPA9
OPA1
ZNF391
GFM1
PHOSPHO2-KLHL23
PHOSPHO2
CCDC173
TRMT61B